VII. REFERENCES - Shodhgangashodhganga.inflibnet.ac.in/bitstream/10603/7010/10/... · VII....

25
VII. REFERENCES AABO, S., RASMUSSEN, O. F., ROSSEN, L., SORENS EN, P. D. and OLSEN, J. E., 1993. Salmonella identification by the polymerase chain reaction. Mol. Cell Probes, 7: 171-178. AARESTRUP, F. M.,LERTWORAPREECHA, M., EVANS, M. C., BANGTRAKULNONTH, A., CHALERMCHAIKIT, T., HENDRIKSEN, R. S. and WEGENER, H. C., 2003. Antimicrobial susceptibility and occurrence of resistance genes among Salmonella enterica serovar Weltevreden from different countries. J. Antimicrob. Chemother., 52: 715-718. AARTS, H. J., BOUMEDINE, S. K., NESME, X. and CLOECKAERT, A., 2001. Molecular tools for the characterisation of antibiotic-resistant bacteria. Vet. Res., 32:363 - 380. AHMED, A. M., NAKANO, H. and SHIMAMOTO, T., 2005. Molecular characterization of integrons in non-typhoid Salmonella isolated in Japan: description of an unusual class 2 integron. J. Antimicrob. Chemother., 55: 371 - 374. ALFORD, A. J. and PALUMBO, A. S., 1969. Interaction of salt, pH and temperature on the growth and survival of salmonellae in ground pork. Appl. Microbiol., 17: 528-532. ALLARD, J. D., GIBSON, M. L., VU, L. H., NGUYEN, T. T. and BERTRAND, K. P., 1993. Nucleotide sequence of class D tetracycline resistance genes from Salmonella Ordonez. Mol. Gen. Genet., 237: 301-305. ALONSO, J. L., BOTELLA, M. S., AMOROS, I. and RAMBACH, A., 1992. Salmonella detection in marine waters using a short standard method. Water Res., 26: 973-978. ALPUCHE-ARANDA, C. M., RACOOSIN, E. L., SWANSON, J. A. and MILLER, S. I., 1994. Salmonella stimulate macrophage macropinocytosis and persist within spacious phagosomes. J. Exp. Med., 179: 601-608. ALTMEYER, R. M., McNERN. J. K., BOSSIO, J. C., ROSENSHINE, I., FINLAY, B. B. and GALAN, J. E., 1993. Cloning and molecular characterization of a gene involved in Salmonella adherence and invasion of cultured epithelial cells. Mol. Microbiol., 7: 89-98. ANDERSON, A. W., BERG, R. and EKLUND, M. W., 1971. Technical Aspects of Fish Quality Control. FAO Fisheries Report, Food and Agricultural Organisation, United Nations, Rome. pp.115. ARAI, T., ISHIBACHI, Y. and MATSUI, K., 1992. Mechanism of selective pathogenesis of Salmonella serovars and suggestions for chemotherapy and development of safe vaccines for typhoid fever. In: PANG, T., KOH, C. L. and PUTCHUCHEARY, S. D., (Eds.), Typhoid fever strategies for the 90’s. World Scientific River Edge, N. J., pp. 140-147. AUSUBEL, F., BRENT, R., KINGSTON, R. E., MOORE, D. D., SEIDMAN, J. G., SMITH, J. A. and STRUHL, K. (Eds.) 1992. Current protocols in Molecular Biology. 2 rd Ed. Unit. 2.4. Green Publications Associations, New York.

Transcript of VII. REFERENCES - Shodhgangashodhganga.inflibnet.ac.in/bitstream/10603/7010/10/... · VII....

Page 1: VII. REFERENCES - Shodhgangashodhganga.inflibnet.ac.in/bitstream/10603/7010/10/... · VII. REFERENCES AABO, S., RASMUSSEN, O. F., ROSSEN, L., SORENSEN, P. D. and OLSEN, J. E., 1993.

VII. REFERENCES

AABO, S., RASMUSSEN, O. F., ROSSEN, L., SORENS EN, P. D. and OLSEN, J. E.,

1993. Salmonella identification by the polymerase chain reaction. Mol. Cell Probes, 7: 171-178.

AARESTRUP, F. M.,LERTWORAPREECHA, M., EVANS, M. C.,

BANGTRAKULNONTH, A., CHALERMCHAIKIT, T., HENDRIKSEN, R. S. and WEGENER, H. C., 2003. Antimicrobial susceptibility and occurrence of resistance genes among Salmonella enterica serovar Weltevreden from different countries. J. Antimicrob. Chemother., 52: 715-718.

AARTS, H. J., BOUMEDINE, S. K., NESME, X. and CLOECKAERT, A., 2001. Molecular

tools for the characterisation of antibiotic-resistant bacteria. Vet. Res., 32:363 - 380. AHMED, A. M., NAKANO, H. and SHIMAMOTO, T., 2005. Molecular characterization of

integrons in non-typhoid Salmonella isolated in Japan: description of an unusual class 2 integron. J. Antimicrob. Chemother., 55: 371 - 374.

ALFORD, A. J. and PALUMBO, A. S., 1969. Interaction of salt, pH and temperature on the

growth and survival of salmonellae in ground pork. Appl. Microbiol., 17: 528-532. ALLARD, J. D., GIBSON, M. L., VU, L. H., NGUYEN, T. T. and BERTRAND, K. P.,

1993. Nucleotide sequence of class D tetracycline resistance genes from Salmonella Ordonez. Mol. Gen. Genet., 237: 301-305.

ALONSO, J. L., BOTELLA, M. S., AMOROS, I. and RAMBACH, A., 1992. Salmonella

detection in marine waters using a short standard method. Water Res., 26: 973-978. ALPUCHE-ARANDA, C. M., RACOOSIN, E. L., SWANSON, J. A. and MILLER, S. I.,

1994. Salmonella stimulate macrophage macropinocytosis and persist within spacious phagosomes. J. Exp. Med., 179: 601-608.

ALTMEYER, R. M., McNERN. J. K., BOSSIO, J. C., ROSENSHINE, I., FINLAY, B. B.

and GALAN, J. E., 1993. Cloning and molecular characterization of a gene involved in Salmonella adherence and invasion of cultured epithelial cells. Mol. Microbiol., 7: 89-98.

ANDERSON, A. W., BERG, R. and EKLUND, M. W., 1971. Technical Aspects of Fish

Quality Control. FAO Fisheries Report, Food and Agricultural Organisation, United Nations, Rome. pp.115.

ARAI, T., ISHIBACHI, Y. and MATSUI, K., 1992. Mechanism of selective pathogenesis of

Salmonella serovars and suggestions for chemotherapy and development of safe vaccines for typhoid fever. In: PANG, T., KOH, C. L. and PUTCHUCHEARY, S. D., (Eds.), Typhoid fever strategies for the 90’s. World Scientific River Edge, N. J., pp. 140-147.

AUSUBEL, F., BRENT, R., KINGSTON, R. E., MOORE, D. D., SEIDMAN, J. G., SMITH,

J. A. and STRUHL, K. (Eds.) 1992. Current protocols in Molecular Biology. 2rd Ed. Unit. 2.4. Green Publications Associations, New York.

Page 2: VII. REFERENCES - Shodhgangashodhganga.inflibnet.ac.in/bitstream/10603/7010/10/... · VII. REFERENCES AABO, S., RASMUSSEN, O. F., ROSSEN, L., SORENSEN, P. D. and OLSEN, J. E., 1993.

AYYAGIRI, A., JAGDISH, C., NARANG, A., BANERJEE, C. K., PANIGRAHI, D., BHAKOO, O. N. and SARKAR, S., 1990. Outbreak of S. Worthigton meningitis and septicemia in a hospital at Chandigarh (North India). Ind. J. Med. Res., 91: 15 – 17.

BAILEY, J. S., 1998. Detection of Salmonella cells within 24 to 36 hours in poultry samples

with the polymerase chain reaction BAX system. J. Food Prot., 61: 792-795. BANGTRAKULNONTH, A., PORNREONGWONG, S., PULSRIKARN, C.,

SAWANPANYALERT, P., HENDRIKSEN, R. S., LO, F. O., WONG, D. M. and AARESTRUP, F. M., 2004. Salmonella serovars from humans and other sources in Thailand, 1993-2002. Emerg. Infect. Dis., 10: 131-136.

BARROW, P. A., HUGGINS, M. B. and LOVELL, M. A., 1994. Host specificity of

Salmonella infection in chickens and mice is expressed in vivo primarily at the level of reticuloendothilial system. Infect. Immun., 62: 4602 – 4610.

BARZA, M., 2002. Potential mechanisms of increased disease in humans from antimicrobial

resistance in food animals. Clin. Infect. Dis., 34: S123-S125. BAUDART, J., LEMARCHAND, K., BRISABOIS, A. and LEBARON, P., 2000. Diversity

of Salmonella strains isolated from the aquatic environment as determined by serotyping and amplification of the ribosomal DNA spacer regions. Appl. Environ. Microbiol., 66: 1544-1552.

BAUER, A. W., KIRBY, W. M. M., SHERRIS, J. C. and TURCK, M., 1966. Antibiotic

susceptibility testing by standardized single disc method. Am. J. Clin. Pathol., 45: 493-496.

BAUERNFEIND, A., STEMPLINGER, I., JUNGWIRTH, R., ERNST, S. and CASELLAS,

J.M., 1996. Sequences of - lactamase genes encoding CTX-M-1 (MEN-1) and CTX-M-2 and relationship of their amino acid sequences with those of other -lactamases. Antimicrob. Agents Chemother., 40: 509-513.

BAUMLER, A. J., HEFFRON, F. and REISSDRO, D., 1997. Rapid detection of Salmonella

enterica with primers specific for iroB. J. Clin. Microbiol., 35: 1224-1230. BAUMLER, A. J., 1997. The record of horizontal gene transfer in Salmonella. Trends.

Microbiol., 5: 318-322. BECKERS, H. J., HEIDE, J. V. D., FENIGSEN–MARUOBA, U. and PETERS, R., 1987.

Fate of salmonellas and completing flora in meat sample enrichments in buffered peptone water and in Muller-Kaufman’s tetrathionate medium. J. Appl. Bacteriol., 62: 97-104.

BEHLAU, I. and MILLER, S. I., 1993. A PhoP repressed gene promotes Salmonella

typhimurium invasion of epithelial cells. J. Bacteriol., 175: 4475-4484. BEJ, A. K., MAHBUBANI, M. H., DICESARE, J. L. and ATLAS, R. M., 1991. Polymerase

chain reaction – gene probe detection of microorganisms by using filter-concentrated samples. Appl. Environ. Microbiol., 57: 3529-3534.

BEJ, A. K. and MAHBUBANI, M. H., 1994. Detection of microbial pathogens in the

gastrointestinal tract using PCR and gene probe methods In: Elrich, G.D. and

Page 3: VII. REFERENCES - Shodhgangashodhganga.inflibnet.ac.in/bitstream/10603/7010/10/... · VII. REFERENCES AABO, S., RASMUSSEN, O. F., ROSSEN, L., SORENSEN, P. D. and OLSEN, J. E., 1993.

Greenberg, S.J. (Eds), PCR-based diagnostics in infectious disease, Boston, MA: Blackwell Scientific Publications, pp. 559-591.

BEJ, A. K., MAHBUBANI, M. H., BOYCE, M. J. and ATLAS, R. M., 1994. Detection of

Salmonella species in oysters by PCR. Appl. Environ. Microbiol., 60: 363-373. BEJ, A. K., SOUTHWORTH, J. P., LAE, R., MAHBUBANI, M. H. and JONES, D. D.,

1996. Detection of Salmonella in chicken meat using PCR. Food Testing Anal., 2: 17-20.

BENNETT, A. R., GREENWOOD, D., TENMANT, C., BANKS, J. G. and BETTS, R. P.,

1998. Rapid and definitive detection of Salmonella in foods by PCR. Lett. Appl. Microbiol., 26: 437-441.

BERNARDI, A. and BERNARDI, F., 1984. Complete sequence of pSC101. Nucleic Acid

Res., 12: 9415-9426. BIANCA, R., QUINTAES, N., LEAL, C., ELIANE, M., RIES, F., FONESCA, N. E. and

ERNESTO, H., 2004. Conventional and molecular typing of Salmonella typhi strains from Brazil. Rev. Inst. Med. Trop. S Paulo, 44: 315-319.

BLUM, G., OTT, M., LISCHEWSKI, A., RITTER, A., IMRICH, H., TSCHA¨PE, H. and

HACKER, J., 1994. Excision of large DNA regions termed pathogenicity islands from tRNA-specific loci in the chromosome of an Escherichia coli wild-type pathogen. Infect. Immun., 62: 606–614.

BOGOSIAN, G., SAMMONS, L. E., MORRIS, P. J., O’NELL, J. P., HEITKAMP, M. A.

and WEBER, D. B., 1998. Death of Escherichia coli K-12 strain W3110 in soil and water. Appl. Environ. Microbiol., 62: 4114-4120.

BOISE, L. and COLLINS, C., 2001. Salmonella –induced cell death: apoptosis, necrosis or

programmed cell death? . Trends Microbiol., 9: 64-67. BOONMAR, S., BANGTRAKULNONTH, A. and POMRUANGWONG, S., 1998.

Predominant serovars of Salmonella in human and foods from Thailand. J. Vet. Med. Sci., 60: 877-880.

BOYD, D., PETERS, G. A., CLOECKAERT, A., BOUMEDINE, K. S., CHASLUS-

DANCLA, E., IMBERECHTS, H. and MULVEY, M. R., 2001. Complete nucleotide sequence of a 43–kilobase genomic island associated with the multidrug resistance region of Salmonella enterica serovar Typhimurium DT 104 and its identification in phage type DT120 and serovar Agona. J. Bacteriol., 183: 5725-5732.

BRANDS, D. A., INMAN, A. E., GERBA, C. P., MARE, C. J., BILLINGTON, S. J.,

SAIF, L. A., LEVINE, J. F. and JOENS, L.A., 2005. Prevalence of Salmonella spp. in oysters in the United States. Appl. Environ. Microbiol., 71: 893-897.

BRASHER, C. W., DEPAOLA, A., JONES, D. D. and BEJ, A. K., 1998. Detection of

microbial pathogens in shellfish with multiplex PCR. Curr. Microbiol ., 37: 101-107.

BRENNAN, M. and COOKSON, B., 2000. Salmonella induces macrophage death by

caspase-1-dependent necrosis. Mol. Microbiol., 38: 31-40.

Page 4: VII. REFERENCES - Shodhgangashodhganga.inflibnet.ac.in/bitstream/10603/7010/10/... · VII. REFERENCES AABO, S., RASMUSSEN, O. F., ROSSEN, L., SORENSEN, P. D. and OLSEN, J. E., 1993.

BRETTAR, I. and HOFLE, M.G., 1992. Influence of ecosystematic factors on survival of

Escherichia coli after large-scale release into lake water mesocosms. Appl. Environ. Microbiol., 58: 2201-2210.

BRIGGS, C. E. and FRATAMICO, P. M., 1999. Molecular characterization of an antibiotic

resistance gene cluster of Salmonella typhimurium DT104. Antimicrob. Agents Chemother., 43: 846 - 849.

BROWNE, S. H., LESNICK, M. L. and GUINEY, D. G., 2002. Genetic requirements for

Salmonella – induced cytopathology in human monocyte-derived macrophages. Infect. Immun., 70: 7126-7135.

BURTSCHER, C., FALL, P. A., WILDERER, P. A. and WUERTZ, S., 1999. Detection of

Salmonella spp. and Listeria monocytogenes in suspended organic waste by nucleic acid extraction and PCR. Appl. Environ. Microbiol., 65: 2235-2237.

CANDRIAN, U., 1995. Polymerase chain reaction in food microbiology. J. Microbiol. Meth.,

23: 89-103. CARLSON, S. A., BOLTON, L. F., BRIGGS, C. E., HURD, H. S., SHARMA, V. K.,

FEDORKA-CRAY, P. J. and JONES, B. D., 1999. Detection of multi-resistant Salmonella typhimurium DT 104 using multiplex and fluorogenic PCR. Mol. Cell Probes., 13: 213-222.

CARTER, P. B. and COLLINS, F. M., 1974. Growth of typhoid and paratyphoid bacilli in

intravenously infected mice. Infect. Immun., 10: 816 – 822. CHAO, W., DING, R. and CHEN, R., 1987. Survival of pathogenic bacteria in environmental

microcosms. Chinese J. Microbiol. Immunol., 20: 339–348. CHEN, L. M., KANIGA , K. and GALAN, J. E., 1996. Salmonella spp. are cytotoxic for

cultured macrophages. Mol. Microbiol., 21 (5): 1101 – 1115. CHEN, S., YEE, A., GRIFFITHS, M., LARKIN, C., YAMASHIRO, C. T., BEHARI, R.,

PASZKO-KOLVA, C., RAHN, K. and De GRANDIS, S. A., 1997. The evaluation of a fluorogenic polymerase chain reaction assay for the detection of Salmonella species in food commodities. Int. J. Food Microbiol., 35: 239-250.

CHEN, J. and GRIFFITHS, M. W., 2001. Detection of Salmonella and simultaneous

detection of Salmonella and Shiga like toxin producing E. coli using magnetic capture hybridization polymerase chain reaction. Lett. Appl. Microbiol., 32: 7-11.

CHEN, S., ZHAO, S., WHITE, D. G., SCHROEDER, C. M., LU, R., YANG, H.,

MCDERMOTT, P. F., AYERS, S. and MENG, J., 2004. Characterization of multiple antimicrobial- resistant Salmonella serovars isolated from retail meat. Appl. Environ. Microbiol., 70: 1-7.

CHERRY, W. B., HANKS, J. B., THOMASON, B. M., MURLIN, A. M., BIDDLE, J. W.

and CROOM, J. M., 1972. Salmonellae as an index of pollution of surface waters. Appl. Microbiol., 24: 334–340.

Page 5: VII. REFERENCES - Shodhgangashodhganga.inflibnet.ac.in/bitstream/10603/7010/10/... · VII. REFERENCES AABO, S., RASMUSSEN, O. F., ROSSEN, L., SORENSEN, P. D. and OLSEN, J. E., 1993.

CHIU, C. H., WU, T. L., SU, L. H., CHU, C., KUO, A. J., CHIEN, M. S. and LIN, T.Y., 2002. The emergence in Taiwan of fluoroquinone resistance in Salmonella enterica serotype cholerasuis. N. Engl. J. Med., 346: 413-419.

CHIU, C. H., TANG, P., CHU, C., HU, S., BAO, Q., YU, J., CHOU, Y. Y., WANG, H. S.

and LEE, Y. S., 2005. The genome sequence of Salmonella enterica serovar Choleraesuis, a highly invasive and resistant zoonotic pathogen. Nucl. Acids Res., 33: 1690-1698.

CLARK, M. A., JEPSON, M. A., SIMMONS, N. L. and HIRST, B. H., 1994. Preferential

interaction of Salmonella Typhimurium with mouse Peyer’s patch M cells. Res. Microbiol., 145: 543-552.

CLOUTHIER, S. C., COLLINSON, S. K., WHITE, A. P., BANSER, P. A. and KAY, W. W.,

1998. tRNAArg (fimU) and expression of SEF14 and SEF21 in Salmonella enteritidis. J. Bacteriol., 180: 840-845.

COCOLIN, L., MANZANO, M., LANTONI, C. and LOMI, G., 1998. Use of polymerase

chain reaction and restriction enzyme analysis to directly detect and identify S. Typhimurium in food. J. Appl. Microbiol., 85: 673-677.

COHEN, N. D., McGRUDER, E. D., NEIBERGS, H. L., BEHLE, R. W., WALLIS, D. E.

and HARGIS, B. M., 1994a. Detection of Salmonella enteriditis in feces from poultry using booster polymerase chain reaction and oligonucleotide primers specific for all members of the genus Salmonella. Poult. Sci., 73: 354-357.

COHEN, N. D., WALLIS, D. E., NEIBERGS, H. L., McELROY, A. P., McGRUDER, E. D.,

DeLOACH, J. R, CORRIER, D. E. and HARGIS, B. M., 1994b. Comparison of the polymerase chain reaction using genus-specific oligonucleotide primers and microbiologic culture for the detection of Salmonella in drag-swabs from poultry houses. Poult. Sci., 73: 1276-1281.

COHEN, H. J., MECHANDA, S. M. and LIN, W., 1996. PCR amplification of the fimA gene

sequence of Salmonella typhimurium, a specific method for detection of Salmonella spp. Appl. Environ. Microbiol., 62: 4303–4308.

COHEN, I., CASTEDO, M. and KROEMER, G., 2002. Tantalizing Thanatos: unexpected

links in death pathways. Trends Cell Biol., 12: 293-295. COLLAZO, C. M. and GALAN. J. E., 1997. The invasion associated TYPE III system of

Salmonella typhimurium directs the translocation of sip protein into the host cells. Mol. Microbiol., 24: 747-756.

COLLAZO, C. M., ZIERLER, M. K. and GALAN, J. E., 1995. Functional analysis of the

Salmonella typhimurium invasion genes invI and invJ and identification of a target of the protein secretion apparatus encoded in the inv locus. Mol. Microbiol., 15: 25-38

COQUARD, D., EXINGER, A. and JELTSCH, J. M., 1999. Routine detection of Salmonella

species in water: comparative evaluation of ISO and ProbeliaTM polymerase chain reaction methods. J. Assoc. Official. Anal. Chem. Int., 82: 871-876.

CROSS, J. E., BRENNER, D. J., EWING, W. H., and FALKOW, S., 1973. Molecular

relationships among Salmonellae. J. Bacteriol., 115: 307-315.

Page 6: VII. REFERENCES - Shodhgangashodhganga.inflibnet.ac.in/bitstream/10603/7010/10/... · VII. REFERENCES AABO, S., RASMUSSEN, O. F., ROSSEN, L., SORENSEN, P. D. and OLSEN, J. E., 1993.

DAUGA, G., ZABREVSBARIA, A. and GRIMONT, P. A., 1998. Restriction fragment

length polymorphic analysis of some flagellin genes of Salmonella. J. Clin. Microbiol., 36: 2835-2643.

DALY, M. and FANNING, S., 2000. Characterization and chromosomal mapping of

antimicrobial resistance genes in Salmonella enterica serotype Typhimurium. Appl. Environ. Microbiol., 66: 4842 - 4848.

DALY, M., VILLA, L., PEZZELLA, C., FANNING, S. and CARATTOLI, A. 2005.

Comparison of multidrug resistance gene regions between two geographically unrelated Salmonella serotypes, J. Antimicrob. Chemother., 55: 558 - 561.

DARWIN, K. H. and MILLER, V. L., 1999. Molecular basis of the interaction of Salmonella

with the intestinal mucosa. Clin. Microbiol. Rev., 12: 405-428. DHIR, V. K and DODD, C. E. R., 1995. Susceptibility of suspended and surface attached

Salmonella enteritidis to biocides at elevated temperatures. Appl. Environ. Microbiol., 61: 1731-1738.

DI CONZA, J., AYALA, J. A., POWER, P., MOLLERACH, M. and GUTKIND, G., 2002.

Novel class 1 integron (InS21) carrying blaCTX-M-2 in Salmonella enterica serovar Infantis. Antimicrob. Agents Chemother., 46: 2257-2261.

DiRITA, V. J., 2001. Molecular basis of Vibrio cholerae pathogenesis. In Principles of

bacterial pathogenesis. GROISMAN, E. A. (ed.), Academic Press, San Diego, Calif, pp. 457–508.

DOUBLET, B., WEILL, F. X., FABRE, L., CHASLUS-DANCLA, E. And CLOECKAERT,

A., 2004. Variant Salmonella genomic island 1 antibiotic resistance gene cluster containing a novel 30-N-aminoglycoside acetyltransferase gene cassette, aac(3)-Id, in Salmonella enterica serovar Newport. Antimicrob. Agents Chemother., 48: 3806- 3812.

DYSON, N. J., 1995. Immobilization of nucleic acids and hybridization analysis. In:

Essential Molecular biology. Brown, T.A. (ed.), Oxford University Press, Oxford, pp.111 -157.

EDWARDS, P. R. and EWING, W. H., 1972. Identification of enterobacteriaceae. 3rd Ed.,

Burgess Publishing Company, Minneapolis. pp. 452-467. EICHELBERG, K., GINDCCHIO, C. C. and GALAN, J. E., 1994. Molecular and functional

characterization of the Salmonella typhimurium invasion genes invB and invC: homology of invC to the F0 F1 ATPase family of proteins. J. Bacteriol., 176: 4501-4510.

ENDLEY, S., PENA, J., RICKE, S. C. and PILLAI, S. D., 2001. The applicability of hns and

fumA primers for detecting Salmonella in bioaerosols associated with animal and municipal wastes. World J. Microbiol. Biotechnol., 17: 363-369.

FACH, P., DILASSER, F., GROUT, J. And TACHE, J., 1999. Evaluation of a polymerase

chain reaction-based test for detecting Salmonella spp. in food amples: probelia Salmonella spp. J. Food Prot., 62: 1387-1393.

Page 7: VII. REFERENCES - Shodhgangashodhganga.inflibnet.ac.in/bitstream/10603/7010/10/... · VII. REFERENCES AABO, S., RASMUSSEN, O. F., ROSSEN, L., SORENSEN, P. D. and OLSEN, J. E., 1993.

FDA, 1992. Salmonella. In: Bacteriological Analytical Manual, Food and Drug

Administration, AOAC International Arlington. pp. 53 – 64. FIELDS, P. I., SWANSON, R. V., HAIDARIS, C. G. and HEFFRON, F., 1986. Mutant of

Salmonella Typhimurium that cannot survive within the macrophages are avirulent. Proc. Natl. Acad. Sci. USA, 93: 9833 – 9838.

FINLAY, B. B., 1994. Molecular and cellular mechanism of Salmonella pathogenesis. Curr.

Top. Microbiol. Immun,, 192: 163 – 185. FINLAY, B. B., RUSCHKOWSKI, S. and DEDHAR, S., 1991. Cytoskeletal rearrangements

accompanying Salmonella entry into epithelial cells. J. Cell. Sci., 99:283-296. FALDYNOVA, M., PRAVCOVA, M., HAVLICKOVA, H., KOLACKOVA, I., CIZEK, A.,

KARPISKOVA, R. and RYCHLIK, I., 2003. Evolution of antibiotic resistance in Salmonella enterica serovar Typhimurium strains isolated in the Czech Republic between 1984 and 2002. Antimicrob. Agents. Chemother., 47: 2002 - 2005.

FLUIT, A. C., WIDJOJOATMODJO, M. N., BOX, A. T. A., TORENSMA, R. and

VERHOEF, J., 1993. Rapid detection of salmonellae in poultry with the magnetic immunopolymerase chain reaction assay. Appl. Environ. Microbiol. 59: 1342–1346.

FLUIT, A. C. and SCHMITZ, F. J., 2004. Resistance integrons and super-integrons. Clin.

Microbiol. Infect., 10: 272-288. FLUIT, A. C., 2005. Towards more virulent and antibiotic-resistant Salmonella?. FEMS

Immunol. Med. Microbiol., 43: 1-11. FOLKESSON, A., LOFDAHL, S. and NORMARK, S., 2002. The Salmonella enterica

subspecies I specific centisome 7 genomic island encodes novel protein families present in bacteria living in close contact with eukaryotic cells. Res. Microbiol., 153: 537–545.

FOLTZ, V. D., 1969. Salmonella ecology. J. Am. Oil. Chem. Soc., 46: 222–224. FORSBERG, M., BLOMGRAN, R., LERM, M., SARNDAHL, E., SEBTI, S. M. and

HAMILTON, A., 2003. Differential effects of invasion by and phagocytosis of Salmonella typhimurium on apoptosis in human macrophages: potential role of Rho-GTPases and Akt. J. Leukoc. Biol., 74: 620-629.

FRATAMICO, P. M. and STROBAUGH, T. P., 1998. Simultaneous detection of Salmonella

spp. and Escherichia coli O157:H7 by multiplex PCR. J. Ind. Microbiol. Biotechnol., 21: 92-98.

FRECH, G. and SCHWARZ, S., 1998. Tetracycline resistance in Salmonella enterica subsp.

enterica serovar Dublin isolates. Antimicrob. Agents Chemother., 42 : 1288-1289. FRECH, G., KEHRENBERG, C. and SCHWARZ, S., 2003. Resistance phenotypes and

genotypes of multiresistant Salmonella enterica subsp. enterica serovar Typhimurium var. Copenhagen isolates from animal sources. J. Antimicrob. Chemother., 51: 180-182.

Page 8: VII. REFERENCES - Shodhgangashodhganga.inflibnet.ac.in/bitstream/10603/7010/10/... · VII. REFERENCES AABO, S., RASMUSSEN, O. F., ROSSEN, L., SORENSEN, P. D. and OLSEN, J. E., 1993.

FRICKER, C. R., 1987. The isolation of Salmonellas and Campylobacters. J. Appl. Bacteriol., 63: 99-116.

FU, Y. and GALAN, J. E., 1998. The Salmonella typhimurium tyrosine phosphatase Spt P is

translocated into host cells and disrupts the actin ctyoskeleton. Mol. Microbiol., 27: 359-368.

GALAN, J. E. and CURTISS, R., 1989. Cloning and molecular characterization of genes

whose products allow Salmonella typhimurium to penetrate tissue culture cells. Proc. Natl. Acad. Sci., 86: 6383-6387.

GALAN, J. E., GINOCCHIO, C. and COSTEAS. P., 1992. Molecular and functional

characterization of the Salmonella invasion invA: homology of inv A to members of a new protein family. J. Bacteriol., 174: 4338-4349.

GALAN, J. E., 2001. Salmonella interaction with host cells: type III Secretion at Work. Ann.

Rev. Cell Dev. Biol., 17: 53-86. GARBARG–CHENON, A., GODARD, V., LABIA, R. and NICOLAS, J.C., 1990.

Nucleotide sequence of SHV-2 -lactamase gene. Antimicrob. Agents Chemother., 34 : 1444-1446.

GEORGHIOU, P. R., HAMILL, R. J., WRIGHT, C. E., VERSALOVIC, J., KOEUTH, T.,

WATSON, D. A. and LUPSKI, J. R., 1995. Molecular epidemiology of infections due to Enterobacter aerogenes: identification of hospital associated strains by molecular techniques. Clin. Infect. Dis., 20: 84-94.

GINOCCHIO, C., PACE, J. and GALAN, J. E., 1992. Identification and molecular

characterization of a Salmonella typhimurium gene involved in triggering the internalization of Salmonella into cultured epithelial cells. Proc. Natl. Acad. Sci., 89: 5976-5980.

GLASER, M. J. and NEWMAN, L. S., 1982. A review of human salmonellosis. I. Infective

dose. Rev. Infect. Dis., 34:1096–1106. GOODING, C. M. and CHOUDARY, P. V., 1999. Comparison of different primers for rapid

detection of Salmonella using the polymerase chain reaction. Mol. Cell Probes, 13: 341-347.

GOPALAKRISHNAN, T. S. I. and DAMLE, S. P., 1981. Isolation of Salmonella larochelle

for the first time in India. Fish. Technol., 18: 63. GOPALAKRISHNAN, T. S. I. and JOSEPH, A. C., 1980. Isolation of Salmonella roan for

the first time in India. Fish. Technol., 17: 123. GOPALAKRISHNAN, T. S. I. and SRIVASTAVA, K. P., 1989. On the pattern of

Salmonella serotypes in fishery producgs, froglegs and processing environment. Fish. Technol., 26: 131.

GOPALAKRISHNAN, T. S. I. and SRIVASTAVA, K. P., 1989. Reliability of Escherichia

coli and faecal Streptococci as indicators of Salmonella in frozen fishery products, Fish. Technol., 26: 135.

Page 9: VII. REFERENCES - Shodhgangashodhganga.inflibnet.ac.in/bitstream/10603/7010/10/... · VII. REFERENCES AABO, S., RASMUSSEN, O. F., ROSSEN, L., SORENSEN, P. D. and OLSEN, J. E., 1993.

GOPALAKRISHNAN, T. S. I., and VERMA, P. R. G., 1990. Sources of contamination with Salmonella during processing of frozen shrimps. Fish. Technol., 27: 60.

GREGORY, S. G., RICHARD, D., OBERST, M., HAYS, P., SCOTT, M. and

CHENGAPPA, M. M., 1994. Detection of Salmonella serovars from clinical samples by enrichment broth cultivation–PCR procedure. J. Clin. Microbiol., 32: 1742-1749.

GRIMONT, F. and GRIMONT, P. A., 1986. Ribosomal ribonucleic acid gene restriction

patterns as potential taxonomic tools. Ann. Inst. Paskur. Microbiol., 137: 165-175. GROISMAN, E. A., ANNE, B. B. P., and KEIICHI, V., 1999. Pathogenicity islands and the

evolution of Salmonella virulence. In: KAPER, J.B. and HACKER, J.(Eds.), Pathogenicity Islands and other Mobile Virulence Elements. ASM Washington D.C., pp. 127-150.

GROISMAN, E. A. and OCHMAN, H., 1993. Cognate gene clusters govern invasions of host

epithelial cells by Salmonella Typhimurium and Shigella flexneri. Embo. J., 12: 3779-3787.

GUERRA, B., SOTO, S. M., ARGUELLES, J. M. and MENDOZA, M. C., 2001. Multidrug

resistance is mediated by large plasmids carrying a class 1 integron in the emergent Salmonella enterica serotype [4, 5, 12: i:-]. Antimicrob. Agents Chemother., 45: 1305 - 1308.

GUILLOTEAU, L. A., WALLIS, T. S., GAUTIER, A.V., MACLNTYRE, S., PLATT, D. J.

and LAX, A. J., 1996. The Salmonella virulence plasmid enhances Salmonella-induced lysis of macrophages and influences inflammatory responses. Infect. Immun., 64: 3385-3393.

GULIG, P. A. and CURTISS, R., 1987. Plasmid associated virulence of Salmonella

typhimurium. Infect. Immun., 55: 2891-2901. GULIG, P. A., 1990. Virulence plasmids of Salmonella typhimurium and other Salmonella.

Microb. Pathog., 8: 3-11. GULIG, P. A., CALDWELL A. L. and CHIODO, V. A., 1992. Identification genetic analysis

and DNA sequence of a 7-8 K virulence region of the Salmonella typhimurium virulence plasmid. Mol. Microbiol., 6: 1395-1411.

GWERA, B., SOTO, S.M., ARGUELLES, J.M. and MENDOZA, M.C., 2001. Multidrug

resistance is mediated by large plasmids carrying class 1 integrons in the emergent Salmonella enterica serotype [4,5, 12:1]. Antimicrob. Agents. Chemother., 45: 1305-1308.

HACKER, J., 1990. Genetic determinants coding for fimbriae and adhesins of extraintestinal

Escherichia coli. Curr. Top. Microbiol. Immunol., 151: 1–27. HACKER, J., BENDER, L., OTT, M., WINGENDER, J., LUND, B., MARRE, R. and

GOEBEL, W., 1990. Deletions of chromosomal regions coding for fimbriae and hemolysins occur in vitro and in vivo in various extraintestinal Escherichia coli isolates. Microb. Pathog., 8: 213–225.

Page 10: VII. REFERENCES - Shodhgangashodhganga.inflibnet.ac.in/bitstream/10603/7010/10/... · VII. REFERENCES AABO, S., RASMUSSEN, O. F., ROSSEN, L., SORENSEN, P. D. and OLSEN, J. E., 1993.

HACKER, J., BLUM-OEHLER, G., MUHLDORFER, I. and TSCHAPE, H., 1997. Pathogenicity islands of virulent bacteria: structure, function and impact on microbial evolution. Mol. Microbiol., 23:1089–1097.

HAMMAMI, A., ARLET, G., REDJEB, B. S., GRIMONTH, F., BEN HASSEN, A., REKIK,

A. and PHILIPPON, A. 1991. Nosocomial outbreak of acute gastroenteritis in a neonatal intensive care unit in Tunisia caused by multiple drug resistant Salmonella Wien producing SHV-2 beta-lactamase, Eur. J. Clin. Microbiol. Infect. Dis., 10: 641-646.

HANSEN-WESTER, I., STECHER, B. and HENSEL, M., 2002. Analyses of the

evolutionary distribution of Salmonella translocated effectors. Infect. Immun., 70: 1619–1622.

HARVEY, R. W. S. and PRICE, T. H., 1982. Salmonella isolation and identification

techniques. Alternative to standard method. In: CORRY, J. E. L., ROBERTS, D. and SKINNER, F. A., (Eds.,), Isolation and Identification Methods for Food Poisoning OrganismsAcademic Press: London, New York. pp. 35 – 42.

HASMAN, H., MEVIUS, D., VELDMAN, K., OLESEN, I. and AARESTRUP, F. M., 2005.

-Lactamases among extended–spectrum -Lactamase (ESBL)–resistant Salmonella from poultry, poultry products and human patients in the Netherlands. J. Antimicrob. Chemother., 56: 115-121.

HATHA, A. A. M. and LAKSHMANAPERUMALSAMY, P., 1997. Prevalence of

Salmonella in fish and crustaceans from markets in Coimbatore, South India. Food Microbiol., 14: 111 - 116.

HAYDEN, J. D., HO, S. A., HAWKEY, P. M., TAYLOR, G. R., and QUIRKE, P., 1991.

The promise and pitfalls of PCR. Rev. Med. Microbiol., 2: 129-137. HELMUTH, R. and SCHROETER, A., 1994. Molecular typing methods for S. enteritis. Int.

J. Food Microbiol., 67-77. HEINITZ, M. L., RUBLE, R. D., WAGNER, D. E. and TATINI, S. R., 2000. Incidence of

Salmonella in fish and seafood. J. Food Prot., 63: 579-592. HENDRICKS, W., 1971. Increased recovery rate of Salmonella from stream bottom

sediment versus surface waters. Appl. Microbiol., 21: 379-380. HENSEL, M., SHEA, J. E., GLEESON, C., JONES, M., DALTON, E. and HOLDEN D.W.,

1995. Simultaneous identification of bacterial virulence genes by negative selection. Science, 269: 400-403.

HENSEL, M., SHEA, J. E., RAURACH, B., MONACK, D., FALKOW, S. and GLEESON,

C., 1997. Functional analysis of ssaJ and the seaK/U operon, 13 genes encoding components of the type III secretion apparatus of Salmonella pathogenecity island 2. Mol. Microbiol., 24: 155-167.

HENSEL, M., SHEA, J. E., BAUMLER, A. J., GLEESON, C., BLATTNER, F. R. and

HOLDEN, D. W., 1997a. Analysis of the boundaries of Salmonella pathogenicity island 2 and the corresponding chromosomal region of Escherichia coli K-12. J. Bacteriol., 179: 1105–1111.

Page 11: VII. REFERENCES - Shodhgangashodhganga.inflibnet.ac.in/bitstream/10603/7010/10/... · VII. REFERENCES AABO, S., RASMUSSEN, O. F., ROSSEN, L., SORENSEN, P. D. and OLSEN, J. E., 1993.

HENSEL, M., HINSLEY, A. P., NIKOLAUS, T., SAWERS, G. and BERKS, B. C., 1999a.

The genetic basis of tetrathionate respiration in Salmonella typhimurium. Mol. Microbiol., 32: 275–288.

HENSEL, M., 2000. Salmonella pathogenicity island 2. Mol. Microbiol., 36: 1015-1023. HERIKSTAD, H., MOTARJEMI, Y. and TAUXE, R., 2002. V. Salmonella surveillance: a

global survey of public health serotyping. Epidemiol. Infect., 129(1):1-8. HERNANDEZ, L. D., PYPAERT, M., FLAVELL, R. A. and GALAN, J. E., 2003. A

Salmonella protein causes macrophage cell death by inducing autophagy. J. Cell Biol., 163: 1123-1131.

HERSH, D., MONACK, D., SMITH, M., GHORI, N., FALKOW, S. and ZYCHLINKSKY,

A., 1999. The Salmonlla invasion SipB induces macrophage apoptosis by binding to caspase-1. Proc. Natl. Acad. Sci. USA, 96: 2396-2401.

HIGH, N. J., HALES, B. A., JANN, K. and BOULNOIS, G. J., 1988. A block of

urovirulence genes encoding multiple fimbriae and hemolysin in Escherichia coli O4:K12:H. Infect. Immun., 56: 513–517.

HILL, W. E. and KEASLER, S. P., 1991. Identification of foodborne pathogens by nucleic

acid hybridization. Int. J. Food Microbiol., 12: 67-76. HONG, Y., LIU, T., HOFACRE, C., MAIER, M., WHITE, D. G., AYERS, S., WANGL and

MAURER, J. J., 2003. A restriction fragment length polymorphism based polymerase chain reaction is an alternative to serotyping for identify Salmonella serotypes. Avian Dis., 47: 387-395.

HOOK, E. W., 1990. Salmonella species (including typhoid fever) In: MANDELL, G. L. ,

DOUGLAS, R. G. and BENNET, J. E (Eds.), Principles and Practice of Infectious Diseases, 3d ed. Churchill Livingstone, New York, N. Y., pp. 1700 – 1716.

HOORFAR, J., BAGGESEN, D. L. and PORTING, P. H., 1999. A PCR based strategy for

simple and rapid identification of rough presumptive Salmonella isolates. J. Microbiol. Methods., 35: 77-84.

HUECK, C. J., HANTMAN, M. J., BAJAJ, V., JOHNSON, C., LEE, C. A. and MILLER, S.

I., 1995. Salmonella typhimurium secreted invasion determinants are homologues to Shigella spaI proteins. Mol. Microbiol., 18: 479-490.

HUMPHREY, T. J., SLATER, E., McALPINE, K., ROWBURY, R. J. and GILBERT, R. J.,

1995. Salmonella enteritidis phage type 4 isolated are more tolerant of heat and of hydrogen peroxide also survive longer on surfaces. Appl. Environ. Microbiol., 61: 3161-3164.

HUNTER, P. R. and GASTON, M. A., 1988. Numerical index for the discriminatory ability

of typing systems. An application of Simpson’s index of diversity. J. Clin. Microbiol., 26: 2465-2466.

IYER, T. S. G. and SRIVASTAVA, K. P., 1989a. Incidence and low temperature survival of

Salmonella in fishery products. Fish Technol., 26: 39-42.

Page 12: VII. REFERENCES - Shodhgangashodhganga.inflibnet.ac.in/bitstream/10603/7010/10/... · VII. REFERENCES AABO, S., RASMUSSEN, O. F., ROSSEN, L., SORENSEN, P. D. and OLSEN, J. E., 1993.

IYER, T. S. G. and SRIVASTAVA, K. P., 1989b. Reliability of E. coli and faecal

Streptococci as indicators of Salmonella in frozen fishery products. Fish. Technol., 26: 131.

IYER, T. S. G. and VARMA, P. R. G., 1990. Sources of contamination with Salmonella

during processing of frozen shrimp. Fish Technol., 27: 60-63. IZUMIYA, H., NOJIRI, N., HASHIWATA, Y., TAMURA, K., TERAJIMA, J. and

WATANABE, H. , 2003. Salmonella enterica serovar Enteritidis. Emerg. Infect. Dis., 9: 1650-1651.

JAMES, A. M., GOPALAKRISHNAN, T. S. I. and RAO, C. C. P., 1985. Survival of

Salmonella in shrimps and frog legs. In RAVINDRAN, K. (ED.), Harvest and Post-harvest Technology of Fish. Society of Fisheries Technologists (India), Cochin, India. pp. 488-489.

JANSSEN, W. A., 1974. Oysters: retention and excretion of three types of human water-

borne diseases causative bacteria. Health. Lab. Sci., 11: 20–24. JESENBERGER, V., PROCYK, K. J., YUAN, J., REIPERT, S. and BACCARINI, M., 2000.

Salmonella-induced caspase-2 activation in macrophages: a novel mechanism in pathogen mediated apoptosis. J. Exp. Med., 192: 1035-1046.

JIMINEZ, L., MUNIZ, I., TORANZOS, G. G. and HAZEN, T. C., 1989. Survival and

activity of Salmonella typhimurium and Escherichia coli in tropical freshwater. J. Appl. Bact., 67: 61-69.

JITRAPAKDEE, S., TASSANAKAJON, A., BOONSAENG, V., PIANKIJAGUM, S. and

PANYIM, S. A., 1995. A simple, rapid and sensitive detection of Salmonella in food by polymerase chain reaction. Mol. Cell. Probes, 9: 375-382.

JOHNSON, C., PEGUES, D. A., HUECK, C. J., LEE, A. and MILLER, S. I., 1996.

Transcriptional activation of Salmonella typhimurium invasion genes by a member of the phosphorylated response regulation super family. Mol. Microbiol., 22: 715-727.

JONES, B. D., GHORI, N. and FALKOW, S., 1994. Salmonella Typhimurium initiates

murine infection by penetrating and destroying the specialized epithelial M cells of the Peyers patches. J. Exp. Med., 180: 15 – 23.

JONES, B. D., and FALKOW, S., 1996. Salmonellosis: Host immune responses and bacterial

virulence determinants. Ann. Rev. Immunol., 14: 533-561. JONES, D. D., LAW, R. and BEJ, A. K., 1993. Detection of Salmonella spp in oysters using

Polymerase chain reaction (PCR) and gene probes. J. Food Sci., 58: 1191-1197. JOSEPH, B., OTTA, S. K., KARUNASAGAR, I. and KARUNASAGAR. I., 2001. Biofilm

formation by Salmonella spp on food contact surfaces and their sensitivity to sanitizers. Int. J. Food Microbiol., 64: 367-372.

KANIGA, K., BOSIO, J. C. and GALAN, J. E., 1994. The Salmonella typhimurium invasion

genes invF and invG encode homologues of the AraC and PulD family of proteins. Mol. Microbiol., 13: 555-568.

Page 13: VII. REFERENCES - Shodhgangashodhganga.inflibnet.ac.in/bitstream/10603/7010/10/... · VII. REFERENCES AABO, S., RASMUSSEN, O. F., ROSSEN, L., SORENSEN, P. D. and OLSEN, J. E., 1993.

KAPPERUD, G. and ROSE, F. O., 1983. Arin Wildlife reservoir of Campylobacter fetus

subsp jejuni, Yersinia spp and Salmonella spp. in Norway. Appl. Environ. Microbiol., 45: 375-380.

* KAUFFMANN, F., 1935. Weitere erfahruson mit dem kombinierten

anreicherungvergaheen fur Salmonella bazillen. Leitsch. Hyg. Infect., 117: 26-32. * KAUFMANN, F., 1941. Die bacteriology der Salmonella–gruppe. Munksgaard,

Copenhagen. * KAUFFMANN, F., 1963. Zur Tialdiagnose der Salmonella-subgenera I, II and III. Acta.

Path. Microbiol. Scand., 58: 109-113. * KAUFFMANN, F., 1966. Zur klassi fizierung und nomenkatur der sub genera I – IV. Zbl.

Bakt. Hyg. Ref., 202: 482-483. * KAUFFMANN, F., 1966. The bacteriology of enterobacteriaceae munksgaard,

Copenhagen. * KAUFFMANN, F., 1978. Das fundament munksgard. Copenhagen. KAURA, Y. K. and SINGH, I. P., 1968. Prevalence of Salmonellae in some of the common

wall lizards, birds and rodents. Ind. J. Med. Res., 56: 1174. KEROUANTON, A., BRISABOIS, A., GROUT, J. and PICARD, B., 1996. Molecular

epidemiological tools for Salmonella Dublin typing. FEMS Immunol. Med. Microbiol., 14: 25-29.

KHAN, A. A., NAWAZ, M. S., KHAN, S. A. and CERNIGLIA, C. E., 2000. Detection of

multidrug-resistant Salmonella typhimurium DT104 by multiplex polymerase chain reaction. FEMS Microbio. Lett., 182: 355- 360.

KING, S. and METZGER, W. I., 1968. A new plating medium for the isolation of enteric

pathogens Hektoen enteric agar. Appl. Microbiol., 16: 577-578. KIMURA, B., KAWASAKI, S., FUJII, T., KUSUMOKI, J., ITOH, T. and FLOOD, S. J. A.,

1999. Evaluation of TaqMan PCR assay for detecting Salmonella in raw meat and shrimp. J. Food Prot., 62: 329-335.

KNAPP, S., HACKER, J., JARCHAU, T. and GOEBEL, W., 1986. Large, unstable inserts in

the chromosome affect virulence properties of uropathogenic Escherichia coli O6 strain 536. J. Bacteriol., 168: 22–30.

KNODLER, L. A. and FINLAY, B. B., 2001. Salmonella and apoptosis: to live or let live?

Microbes. Infect., 3: 1321-1326. KREADER, C. A., 1996. Relief of amplification inhibition in PCR with bovine serum

albumin or T4 gene 32 protein. Appl. Environ. Microbiol., 62: 1102 – 1106. KUDAKA, J., ITOKAZU, K., TAIRA, K., IWAI, A., KONDO, M., SUSA, T. and

IWANAGA M., Characterization of Salmonella isolated in Okinawa, Japan. Jpn. J. Infect. Dis., 59: 15-19.

Page 14: VII. REFERENCES - Shodhgangashodhganga.inflibnet.ac.in/bitstream/10603/7010/10/... · VII. REFERENCES AABO, S., RASMUSSEN, O. F., ROSSEN, L., SORENSEN, P. D. and OLSEN, J. E., 1993.

KUHLE, V., and HENSEL, M., 2004. Cellular microbiology of intracellular Salmonella

enterica: functions of the type III secretion system encoded by Salmonella pathogenicity island 2. Cell. Mol. Life Sci., 61: 2812-2826.

KURITA, A., GOTOH, H., EGUCHI, M., OKADA, N., MATSUURA, S. And MATSUI, H.,

et al., 2003. Intracellular expression of the Salmonella plasmid virulence protein, SpvB, causes apoptotic cell death in eukaryotic cells. Microb. Pathog., 35: 43-48.

KWANG, J., LITTLEDIKE, E. T. and KEEN, J. E., 1996. Use of the polymerase chain

reaction for Salmonella detection. Lett. Appl. Microbiol., 22: 46-51. KWON, Y. M., WOODWARD, C. L., PEFIA, J., CORRIER, D. E., PILLAI, S. D. and

RICKE, S. C., 1999. Comparison of methods for processing litter and air filter matrices from poultry houses to optimize polymerase chain reaction detection of Salmonella typhimurium. J. Rapid Meth. Auto. Microbiol., 7: 103-111.

LACEY, R. W., 1993. Food borne bacterial infections. Parasitololgy, 107: 575-593. LACROIX, F. J. C., CLOECKAERT, A., GREPINET, O., PINAULT, C., POPOFF, M. Y.,

WAXIN, H. and PARDON, P., 1996. Salmonella Typhimurium acrb-like gene: identification and role in resistance to biliary salts and detergents and in murine infection. FEMS Microbiol. Lett., 135: 161-167.

LAUBACH, C., RATHGEBER, J., OSER, A. and APALUMBO, S., 1998. Microbiology of

the swine head meat deboning process. J. Food Prot., 61: 249-252. LEANGPHIBUL, P., NILAKUL, C., SORNACHAI, C., TANTIMAVANICH, S. and

KASEMSUKSAKUL, K., 1986. Investigation of pathogenic bacteria from shrimp pond. Kasetsart J., 20: 333-337.

LEHNER, A., LONCAREVIC, S., WAGNER, M., KREIKE, J. and BRANDL, E., 1999. A

rapid differentiation of Listeria monocytogenes by use of PCR-SSCP in the listeriolysin O (hlyA) locus. J. Microbiol. Methods, 34: 165-171.

LEMASTERS, J., 1999. V. necrapoptosis and the mitochondrial permeability trasition;

shared pathways to necrosis and apoptosis. Am. J. Physiol., 276: G1-G6. LE MINOR, L. and RHODE, R., 1974. Salmonella. In: BUCHANAN, R.E., GIBBONS, N.E.

(Eds.), Bergey’s Manual of Determinative Bacteriology. 8th ed. The Williams and Wilkins Co., Baltimore, pp. 299.

LE MINOR, L. and POPOFF M., 1988. Antigenic Formulae of Salmonella In: 5th revision

WHO Collaborating Center for Reference and Research on Salmonella. Institute Pasteur, Paris. pp.45-56.

LE MINOR, L., 1981. The genus ‘Salmonella’. In: MORTIMER, P. STARR, HEINZ,

STOLP., HANS, G. TRUPER., ALBERT, BALOWS., HANS and SCHLEGE, G. (Eds.), Prokaryotes. pp. 2760-2774.

* LE MINOR, L., VE’RON, M. and POPOFF, M., 1982. Taxonomie Des Salmonella. Ann .

Microbiol. Cinst. Pasteur., 133: 223-243.

Page 15: VII. REFERENCES - Shodhgangashodhganga.inflibnet.ac.in/bitstream/10603/7010/10/... · VII. REFERENCES AABO, S., RASMUSSEN, O. F., ROSSEN, L., SORENSEN, P. D. and OLSEN, J. E., 1993.

LEE, C. Y., PANICKER, G. and BEJ, A. K., 2003. Detection of pathogenic bacteria in shellfish using multiplex PCR followed by Covalink TM NH microwell plate sandwich hybridization. J. Microb. Methods., 53: 199-209.

LEE, J. A., 1973. In: HOBBS, B. C. and CHRISTIAN, J. H. B. (Eds.), Microbiology Safety

of Foods, Academic Press, London, pp. 197- 201. LEVINGS, R. S., PARTRIDGE, S. R., LIGHTFOOT, D., HALL, R. M. and DJORDJEVIC,

S. P., 2005. New integron-associated gene cassette encoding a 3-N-aminoglycoside acetyltransferase. Antimicrob. Agents Chemother., 49: 1238-1241.

LIBBY, S. J., ADAMS, L. G., FICHT, T. A., ALLEN, C., WHITFORD, H. A. and

BUCHMEIER, N. A. et al., 1997. The spv genes on the Salmonella Dublin virulence plasmid are required for severe enteritis and systemic infection in the natural host. Infect. Immun., 65: 1786-1792.

LIBBY, S. J., LESNICK, M., HASEGAWA, P., WEIDENHAMMER, E. and GUINEY, D.

G., 2000. The Salmonella virulence plasmid spv genes are required for cytopathology in human monocyte derived macrophages. Cell. Microbiol., 2: 49-58.

LIGNIE’RES, 1900. Salmonella sub committee of the nomenclature committee of the

International Society of Microbiology. J. Hyg., 34: 330-350. LIM, H., LEE, K. H., HONG, C. H., BAHK, G. -J. and CHOI, W. S., 2005. Comparison of

four molecular typing methods for the differentiation of Salmonella spp. Int. J. Food Microbiol., 105 (3): 411-418.

LIN, C. K. and TSEN, H. Y., 1996. Use of two 16S DNA targeted oligonucleotides as per

primers for the specific detection of Salmonella in foods. J. Appl. Bacteriol., 80: 659-666.

LIN, J. -S. and TSEN, H. -Y., 1999. Development and use of polymerase chain reaction for

the specific detection of Salmonella Typhimurium in stool and food samples. J. Food Prot., 62: 1103–1110.

LINDGREN, S. W., STOJILJKOVIC, I. and HEFFRON, F., 1996. Macrophage killing is an

essential virulence mechanism of Salmonella Typhimurium. Proc. Natl. Acad. Sci., USA 93: 4197 – 4201.

LINDGREN, S. W. and HEFFRON, F., 1997. To sting or be stung: bacteria-induced

apoptosis. Trends Microbiol., 5: 263-264. LIM, H., LEE, K. H., HONG, C. -H., BAHK, G. -J. and CHOI, W. S., 2005. Comparison of

four molecular typing methods for the differentiation of Salmonella spp. Int. J. Food Microbiol., 105: 411-418.

LIPMAN, L. J. A., DE NIJS, A., LAM, T. J. G. M. and GAASTRA, W., 1995. Identification

of Escherichia coli strains from cows with clinical mastitis by serotyping and DNA polymorphism patterns REP and ERIC patterns. Vet. Microbiol., 43: 13-19.

LÖFSTRÖM, C., KNUTSSON, R., AXELSSON, C. E. and RÅDSTRÖM, P., 2004. Rapid

and specific detection of Salmonella spp. in animal feed samples by PCR after culture enrichment. Appl. Environ. Microbiol., 70: 69-75.

Page 16: VII. REFERENCES - Shodhgangashodhganga.inflibnet.ac.in/bitstream/10603/7010/10/... · VII. REFERENCES AABO, S., RASMUSSEN, O. F., ROSSEN, L., SORENSEN, P. D. and OLSEN, J. E., 1993.

LU, J. J., PERNG, C. L., LEE, S. Y. and WAN, C. C., 2000. Use of PCR with universal

primers and restriction endonulcease digestions for detection and identification of common bacterial pathogens in cerebrospinal fluid. J. Clin. Microbiol., 38: 2076-2080.

LUNDBERG, U., VINATZER, U., BERDNIK, D., von GABAIN, A. and BACCARINI, M.,

1999. Growth phase-regulated induction of Salmonella-induced macrophage apoptosis correlates with transient expression of SPI- 1genes. J. Bacteriol., 181: 3433-3437.

LYAYMAN, E. M., 1966. Textbook on the Diseases of fish. Izd. Vyshyas Shkola, Moscow.,

pp. 115–122. MAHON, J., MURPHY, C. K., JONES, P. W. and BARROW, P. A., 1994. Comparison of

multiplex PCR and standard bacteriological methods of detecting Salmonella on chicken skin. Lett. Appl. Microbiol., 19: 169-172.

MAKINO, O. S. -L., KURAZONO, H., CHONGSANGUAM, M., HAYASHI, H., CHEUN,

H. -I., SUZUKI, S. and SHIRAHATA, T., 1999. Establishment of the PCR system specific to Salmonella spp. and its application for the inspection of food and fecal samples. J. Vet. Med. Sci., 61: 1245-1247.

MALORNY, B., HOORFAR, J., BUNGE, G. and HELMUTH, R., 2003. Multicenter

validation of the analytical accuracy of Salmonella PCR: Towards an international standard. Appl. Environ. Microbiol., 69: 290-296.

MARMUR, J., FALKOW, S. and MANDEL, M., 1963. New approaches in bacterial

taxonomy. Ann. Rev. Microbiol., 17: 329-379. MARSH, M. and HILLYARD, D. R., 1990. Nucleotide sequence of hns encoding the DNA-

biding protein of H-NS of Salmonella typhimurium. Nucl. Acid Res., 18: 3397. MARTINETTI, G. and ALTWEGG, G., 1990. rRNA gene restriction pattern and plasmid

analysis as a tool for typing Salmonella enteritis. Res. Microbiol., 141: 1151-1162. MARTINEZ-URTAZA, J., SACO, M., HERNANDEZ-CORDOVA, G., LOZANO, A.,

GARCIA-MARTIN, O. and ESPINOSA, J., 2003. Identification of Salmonella serovars isolated from live molluscan shellfish and their significance in the marine environment. J. Food Prot., 66: 226-232.

MATSUSHITA, S., YAMADA, S., OHTA, K. AND KUDOH, K., 1996 Characteristics of

Salmonella strains isolated from sporadic diarrheal cases during 1992-1994 in the Philippines. Kansen. Zasshi., 70(11):1154-1159.

MERESSE, S., UNSWORTH, K. E., HABERMANN, A., GRIFFITHS, G., FANG, F.,

MARTINEZ-LORENZO, M. J., WATERMAN, S. R., GORVEL, J. P. and HOLDEN, D. W., 2001. Remodelling of Actin cytoskeleton is essential for replication of intravacuolar Salmonella. Cell. Microbiol., 3: 567 – 577.

MEZRIOUI, N., BALEUX, B. and TROUSSELIER, M., 1995. A microcosm study of the

survival of Escherichia coli and Salmonella typhimurium in brackish water. Water Res., 29: 459–465.

Page 17: VII. REFERENCES - Shodhgangashodhganga.inflibnet.ac.in/bitstream/10603/7010/10/... · VII. REFERENCES AABO, S., RASMUSSEN, O. F., ROSSEN, L., SORENSEN, P. D. and OLSEN, J. E., 1993.

MICHAEL, G. B., CARDOSO, M. and SCHWARZ, S., 2005. Class1 integron-associated

gene cassettes in Salmonella enterica subsp. enterica serovar Agona isolated from pig carcasses in Brazil. J. Antimicrobial. Chemother., 55 : 76 - 779.

MICHAEL, G. B., BUTAYE, P., CLOECKAERT, A. and SCHWARZ, S., 2006. Genes and

mutations conferring antimicrobial resistance in Salmonella: an update. Microbes. Infect., pp. 1-17 [Epub ahead of print].

MILLEMANN, Y., LESAGEDESCAUSES, M. C., LAFONT, J. P. and CHASLUS-

DANCLA, E., 1996. Comparison of random amplified polymorphic DNA Analysis and enterobacterial repetitive intergenic consensus PCR for epidemiological studies of Salmonella. FEMS Immunol. Med. Microbiol., 14: 129-134.

MIRAS, I., HERMANT, D., ARRICAV, N. and POPOFF, M. Y., 1995. Nucleotide sequence

of iagA and iagB genes involved in invasion of Hela cells by Salmonella enterica subsp enterica ser typhi. Res. Microbiol., 146:17-20.

MONACK, D. M., RAYPACH, B., HROMAKYJ, A. E. and FALBOW, S., 1996.

S. Typhimurium invasion induces apoptosis in infected macrophages. Pro. Natl. Acad. Sci. USA, 93: 9833-9838.

MONACK, D. M., HERSH, D., GHORI, N., BOULEY, D., ZYCHLINSKY, A. and

FALKOW, S., 2000. Salmonella exploits caspase-11111 to colonize Peyer’s patches in a murine typhoid model. J. Exp. Med., 192: 249-258.

MONACK, D. M., DETWEILER, C. S. and FALKOW, S., 2001. Salmonella pathogenicity

island 2-dependent macrophage death is mediated in part by the host cysteine protease caspase-1. Cell Microbiol., 3: 825-837.

MORRIS, G. K., MARTIN, W. T., SHELTON, W. H., WELLS, J. G. and BRACHMAN, P.

S., 1970. Salmonellae in fish meal plants: Relative amounts of contamination at various stages of processing and a method of control. Appl. Microbiol., 19: 401.

MROZINSKI, P. M. and BETTS, R. P., 1998. Performance tested method certification of

BAXTM® for screening/Salmonella: case study. J. Official Meth. Anal. Assoc. Official Anal. Chem., 81: 1147-1154.

MULVEY, M. R., BOYD, D. A., BAKER, L., MYKYTCZUK, O., REIS, E. M., ASENI, M.

D., RODRIGUES, D. P. and NG, L. K., 2004. Characterization of a Salmonella enterica serovar Agona strain harbouring a class 1 integron containing novel OXA-type b-lactamase (blaOXA-53) and 60-N-aminoglycoside acetyltransferase genes [aac(60)-I30], J.Antimicrob. Chemother., 54: 354-359.

NAIR, S., LIN, T. K., PANG, T. and ALTWEGG, M., 2002. Characterisation of Salmonella

serovars by PCR–single–strand conformation polymorphism analysis. J. Clin. Microbiol., 40: 2346-2351.

NAMBIAR, V. N. and IYER, K. M., 1991. Detection of Salmonella serotypes in fish retail

trade in Kochi. Fish. Technol., 28: 33-37. NAMBIER, N. V. and IYER, K. M., 1990. Microbial quality of fish in retail trade in Cochin,

Fish Technol., 27: 51.

Page 18: VII. REFERENCES - Shodhgangashodhganga.inflibnet.ac.in/bitstream/10603/7010/10/... · VII. REFERENCES AABO, S., RASMUSSEN, O. F., ROSSEN, L., SORENSEN, P. D. and OLSEN, J. E., 1993.

NATH, E. J., NEIDERT, E. and RANDALL, C. J., 1989. Evaluation of enrichment protocols

for the ‘1-2 test’ for Salmonella detection in naturally contaminated foods and feeds. J. Food Prot., 52: 498-499.

NAYYAR AHMED, KARUNASAGAR, I. and KARUNASAGAR, I., 1995.

Microbiology of cultured shrimp in India. Proc. IX IPFC Working Party Meeting on Fish

Technology and Marketing, FAO Fisheries Rep 514 (S), FAO, Rome, pp. 13 – 22. NOGRADY, N., GADO, I., FEKETE, P. Z. and PASZTI, J., 2005. Chloramphenicol

resistance genes in Salmonella enterica subsp. enterica serovar Typhimurium isolated from human and animal sources in Hungary. Vet. Med. Czech., 4: 164 - 170.

NOGVA, J. K. and LILLEHAUG, D., 1999. Detection and quantification of Salmonella in

pure cultures using 5’-nuclease polymerase chain reaction. Int. J. Food Microbiol., 51: 191-196.

NORTH, W. R. and BARTRAM, M. T., 1953. The efficiency of selenite broth of different

compositions in the isolation of Salmonella. Appl. Microbiol., 1:130-134. NORTH, W. R., 1960. Use of crystal violet or brilliant green dyes for the determination of

Salmonella in dried food products. J. Bacteriol., 80: 861-865. NOVICK, R. P., 1981. The development and spread of antibiotic resistant bacteria as a

consequence of feeding antibiotics to livestock. Ann. New York Acad. Sci., 368: 23-59.

O’BRIEN, T. F., 2002. Emergence, spread and environmental effect of antimicrobial

resistance: how use of an antimicrobial anywhere can increase resistance to any antimicrobial anywhere else. Clin. Infect. Dis., 34: S78-S84.

OCHMAN, H. and GROISMAN, E.A., 1996. Distribution of pathogenicity islands in

Salmonella spp. Infect. Immun., 64: 5410–5412. OCHMAN, H., SONCINI, F. C., SOLOMON, F. and GROISMAN, E. A., 1996.

Identification of a pathogenicity island required for Salmonella survival in host cells. Proc. Nat. Acad. Sci., 93: 7800-7804.

OLESEN, I., HASMAN, H. and AERESTRUP, F. A., 2004. Prevalence of -lactamases

among ampicillin-resistant Escherichia coli and Salmonella isolated from food animals in Denmark. Microb. Drug Resist., 10: 334-340.

ORITA, M., SUZUKI, Y., SEBIYA T. and HAYASHI, K., 1989. Rapid and sensitive

detection of point mutations and DNA polymorphisms using polymerase chain reaction. Genomics, 5: 874-879.

ORMAN, B. E., PINEIRO, S. A., ARDUINO, S., GALAS, M., MELANO, R., CAFFER, M.

I., SORDELLI, D. O. and CENTRON, D., 2002. Evolution of multiresistance in nontyphoid Salmonella serovars from 1984 to 1998 in Argentina. Antimicrob. Agents Chemother., 46: 3983-3970.

Page 19: VII. REFERENCES - Shodhgangashodhganga.inflibnet.ac.in/bitstream/10603/7010/10/... · VII. REFERENCES AABO, S., RASMUSSEN, O. F., ROSSEN, L., SORENSEN, P. D. and OLSEN, J. E., 1993.

PAI, H., BYEON, J. -H., YU, S., LEE, B. K. and KIM, S., 2003. Salmonella enterica serovar Typhi strains isolated in Korea containing a multidrug resistance class 1 integron. Antimicrob. Agents Chemother., 47: 2006 - 2008.

PARKER, W. F. and MEE, B. J., 1982. Survival of Salmonella adelaide and fecal coliforms

in coarse sands of swan coastal plains, Western Australia. Appl. Environ. Microbiol., 43: 981 –986.

PARKHILL, J., DOUGAN, G., JAMES, K. D., THOMSON, N. R., PICKARD, D., WAIN,

J., CHURCHER, C., MUNGALL, K. L., BENTLEY, S. D., HOLDEN, M. T. G., SEBAIHIA, M., BAKER, S., BASHAM, D., BROOKS, K., CHILLINGWORTH, T., CONNERTON, P., CRONIN, A., DAVIS, P., DAVIES, R. M., DOWD, L., WHITE, N., FARRAR, J., FELTWELL, T., HAMLIN, N., HAQUE, A., HIEN, T. T., HOLROYD, S., JAGELS, K., KROGH, A., LARSEN, T. S., LEATHER, S., MOULE, S., O’GAORA, P., PARRY, C., QUAIL, M., RUTHERFORD, K., SIMMONDS, M., SKELTON, J., STEVENS, K., WHITEHEAD, S. and BARRELL, B. G., 2001. Complete genome sequence of a multiple drug resistant Salmonella enterica serovar Typhi CT18. Nature, 413: 848 - 852.

PASQUALI, F., KEHRENBERG, C., MANFREDA, G. and SCHWARZ, S., 2005. Physical

linkage of Tn3 and part of Tn/721 in a tetracycline and ampicillin resistance plasmid from Salmonella Typhimurium. J. Antimicrob. Chemother., 55: 562-565.

PATTISHALL, K. H., ACAR, J., BURCHALL, J. J., GOLDSTEIN, F. W. and HARVAY, R.

J., 1977. Two distinct types of trimethoprim–resistant dihydrofolate reductase specified by R plasmids of different compatibility groups. J. Biol. Chem., 252: 2319-2323.

PADUNGTOD, P. and KANEENE, J. B., 2006. Salmonella in food animals and humans in

northern Thailand. Int J Food Microbiol., 108: 346-354. PELZER, K. D., 1989. Salmonellosis . J. Vet. Med. Assoc., 195: 456-463. PEPPER, I. L. and POLLAI, S. D., 1994. Detection of specific DNA sequences in

environmental samples via polymerase chain reaction. In: Methods of soil analysis , Part 2, Microbiological and biochemical properties, Soil science, Society of America Madison, WI 707-726.

PERSING, D. H., 1991. Polymerase chain reaction: trenches to benches. J. Clin. Microbiol.,

29:1281-1285. PEZZELLA, C., RICCI, A., DIGIANNATALE, E., LUZZI, I. and CARATTOLI, A. 2004.

Tetracycline and streptomycin resistance genes, transposons and plasmids in Salmonella enterica isolates from animals in Italy. Antimicrob. Agents Chemother., 48: 903 - 908.

PILLAI, S. D., JOSEPHSON, K. L., BAILEY, R. L., GERBA, C. P. and PEPPER, I. L.,

1991. Rapid method for processing soil samples for polymerase chain reaction amplification of specific gene sequences. Appl. Environ. Microbiol., 57: 2283-2286.

PILLAI, S. D. and RICKE, S. C., 1995. Strategies to accelerate the applicability of gene

amplification protocols for pathogen detection in meat and meat products. Crit. Rev. Microbiol., 21: 239 – 261.

Page 20: VII. REFERENCES - Shodhgangashodhganga.inflibnet.ac.in/bitstream/10603/7010/10/... · VII. REFERENCES AABO, S., RASMUSSEN, O. F., ROSSEN, L., SORENSEN, P. D. and OLSEN, J. E., 1993.

PLOY, M. C., CHAINIER, D., THI, N. H., POILANE, I., CRUAUD, P., DENIS, F.,

COLLIGNON, A. and LAMBERT, T., 2003. Integron-associated antibiotic resistance in Salmonella enterica serovar Typhi from Asia. Antimicrob. Agents Chemother., 47: 1427-1429.

POOLE, K., 2001. Multidrug resistance in Gram-negative bacteria. Curr. Opin. Microbiol.,

4: 500-508. RAHN, K., DEGRANDIS, S. A., CLARKE, R. C., MCEWEN, S. A., GALAN, J. E.,

GINOCCH, O. C., CURTISSIII, R. and GYLES, C. L., 1992. Amplification of an invA gene sequence of Salmonella typhimurium by polymerase chain reaction as a specific method of detection of Salmonella. Mol. Cell Probes, 6: 271-279.

RANDALL, L. P., COOLES, S. W., OSBORN, M. K., PIDDOCK, L. J. V. and

WOODWARD, M. J., 2004. Antibiotic resistance genes, integrons, and multiple antibiotic resistance in thirty-five serotypes of Salmonella enterica isolated from humans and animals in the UK. J. Antimicrob. Chemother., 53: 208 - 216.

REEVES, M. W., EVINS, G. M., HEIBA, A. A., PLIKAYTIS, B. D. and FARMER III, J. J.,

1989. Clonal nature of Salmonella typhi and its genetic relatedness to other salmonellae as shown by mutilocus enzyme electrophoresis and proposal of Salmonella bongori comp. J. Clin. Microbiol., 27: 313-320.

REILLY, P. J. A., TWIDDY, D. R. and FUCKS, R. S., 1992. Review on the occurrence of

Salmonella in cultured tropical shrimps. FAO Fish Crc., 851: 19-23. RHODES, M. W. and KATOR, H., 1988. Survival of Escheirischia coli and Salmonella spp

in estuarine environment. Appl. Environ. Microbiol., 54: 2902-2907. RICKE, S. C., PILLAI, S. D., NORTON, R. A., MACIOROWSKI, K. G. and JONES, F. T.,

1998. Applicability of rapid methods for detection of Salmonella spp in poultry feeds: a review. J. Rapid Meth. Auto. Microbiol., 6: 239-258.

RICKE, S. C. and PILLAI, S. D., 1999. Conventional and molecular methods for

understanding probiotic bacteria functionality in gastrointenstinal tracts. Crit. Rev. Microbiol., 25: 19-38.

ROWE, B., WARD, L. R. and THREFALL, E. J., 1990. Spread of mutiresistant Salmonella

typhi. Lancet. 337: 1065-1066. SAMBROOK, J., FRITSCH, E. F., MANIATIS, T., 1989. Molecular Cloning: A Laboratory

Manual. Small Scale Preparation of Plasmid DNA: Alkaline Lysis Method. Cold Spring Harbor Laboratory Press, New York. pp. 1.25- 1.27.

SANATH KUMAR, H., SUNIL, R., VENUGOPAL, M.N., KARUNASAGAR, I. and

KARUNASAGAR, I., 2003. Detection of Salmonella spp in tropical seafood by polymerase chain reaction. Int. J. Food Microbiol., 2787: 1-5.

SANTOS, R. L., TSOLIS, R. M., BAUMLER, A. J., SMITH, R. and 3rd and ADAMS, L. G.,

2001. Salmonella enterica serovar typhimurium induces cell death in bovine monocyte derived macrophages by early sipB-dependent and delayed sipB- independent mechanisms. Infect. Immun., 69: 2293-2301.

Page 21: VII. REFERENCES - Shodhgangashodhganga.inflibnet.ac.in/bitstream/10603/7010/10/... · VII. REFERENCES AABO, S., RASMUSSEN, O. F., ROSSEN, L., SORENSEN, P. D. and OLSEN, J. E., 1993.

SCHRANK, I. S., MORES, M. A. Z., COSTA, J. L. A, FRAZZON, A. P. G., SONCINI, R. ,

SCHRANK, A., VAINSTEIN, M. H. and SILVA, S. C., 2001. Influence of enrichment media and application of a PCR based method to detect Salmonella in poultry industry products and clinical samples. Vet. Microbiol., 82: 45-53.

SCHWAN, W. R. and KOPECKO, D. J., 1997. Serovar specific differences in Salmonella

survival within macrophage cells. Adv. Exp. Med. Biol., 412: 277-278. SCHWAN, W. R., HUANG, X. -Z., HU, L. and KOPECKO, D. J., 2000. Differential

bacterial survival, replication, and Apoptosis-Inducing Ability of Salmonella Serovars within human and murine macrophages. Infect. Immun., 68 (3): 1005 – 1013.

SCHWARTZ, L., SMITH, S., JONES, M. and OSBORNE, B., 1993. Do all programmed cell

deaths occur via apoptosis? Proc. Natl. Acad. Sci. USA, 90: 980-984. SHEA, J.E., BEUZON, C.R., GLEESON, C., MUNDY, R. and HOLDEN, D.W., 1999.

Influence of the Salmonella typhimurium pathogenicity island 2 type III secretion system on bacterial growth in the mouse. Infect. Immun., 67: 213-219.

SHEWAN, J. M., 1962. Salmonella. In: BORGSTROM, G. (Ed.), Fish as food. Vol.2.

Academic Press, New York. pp. 443 SELANDER, R. K., BELTRAN, P. and SMITH, N. H., 1990. Evolutionary genetic

relationship of clones of Salmonella serovars that cause human typhoid and other enteric fevers. Infect. Immun., 58: 2262-2275.

SHAH, S. A. and ROMICK, T. L., 1997. Subspecies differentiation of Salmonella by PCR-

RFLP of the ribosomal operon using universal primers. Lett. Appl. Microbiol., 25: 54-57.

SHANAHAN, P. M. A., JESUDASON, M. V., THOMSON, C. J. and AMYES, S. G. B.

1998. Molecular analysis of an identification of antibiotic resistance genes in clinical isolates of Salmonella typhi from India. J. Clin. Microbiol., 36: 1595-1600.

SLAYERS, A. A and WHITT, D. D., 2002. Salmonella species In: Bacterial Pathogenesis- A

molecular approach. ASM press, Washington. D. C. pp. 381-397. SIMPKINS, S. A., CHAN, A. B., HAYS, J., POPPING, B. and COOK, N., 2000. An RNA

transcription –based amplification technique (NASBA) for the detection of viable Salmonella enterica. Lett. Appl. Microbiol., 30: 75-79.

SINGH, B. R. and KULSHRESTHA, S. B., 1993. Occurrence of enterotoxigenic Salmonella

serotypes in seafoods. Fish. Technol., 30: 438. SKOLD, O., 2001. Resistance to trimethoprim and sulfonamides. Vet. Res., 32: 261-273. SOTO, S. M., GUERRA, B., GONZALEZ H. M. A. and MENDOZA, M. C., 1999. Potential

three way randomly amplified polymorphic DNA analysis as a typing method for twelve Salmonella serotypes. Appl. Environ. Microbiol., 65: 4830-4836.

Page 22: VII. REFERENCES - Shodhgangashodhganga.inflibnet.ac.in/bitstream/10603/7010/10/... · VII. REFERENCES AABO, S., RASMUSSEN, O. F., ROSSEN, L., SORENSEN, P. D. and OLSEN, J. E., 1993.

SOTO, S. M., RUIZ, J., MENDOZA, M. C., VILA, J., 2003. In vitro fluoroquinolone–resistant mutants of Salmonella enterica serotype Enteritidis: analysis of mechanisms involved in resistance. Int. J. Antimicrob. Agents, 22: 537-540.

SOUMET, C., ERMEL, G., ROSE, N., ROSE, V., DROUIN, P., SALVAT, G. and COLIN,

P., 1999. Evaluation of a multiplex PCR assay for simultaneous identification of Salmonella sp., Salmonella Enteritidis and Salmonella Typhimurium from environmental swabs of poultry houses. Lett. Appl. Microbiol., 28: 113-117.

SRIKANTAIAH, M., SHENOY, M. G. and MOHANKUMAR, K. C., 1985. Studies on the

occurrence of enteric bacteria in the estuarine water along Mangalore coast. Fish Technol., 22: 74-78.

STOLERU, G. H., LE MINOR, L. and LHERITIER, M., 1976. Polynucleotide sequence

divergence among strains of Salmonella subgenus IV and closely related organisms. Ann. Microbiol. (Inst. Pasteur) 127A: 477-486.

STONE, G. S., OBERST., R. D., HAYS, M. P., McVEY, S. and CHENGAPPA, M. M.,

1994. Detection of Salmonella serovars from clinical samples by Enrichment broth cultivation PCR procedure. J. Clin. Microbiol., 32: 1742-1749.

SWAMINATHAN, B. and AYRES, J.C., 1980. A direct immunoenzyme method for the

detection of salmonellae in foods. J. Food Sci., 45: 352-355. SWAMINATHAN, B. and FENG, P., 1994. Rapid detection of food-borne pathogenic

bacteria. Ann. Rev. Microbiol., 48: 401-426. SZABO, E. A. and MACKEY, B. M., 1999. Detection of Salmonella enteritidis by reverse

transcription-polymerase chain reaction (PCR). Int. J. Food Microbiol., 51: 113 – 122.

SZYCH, J., CIESLIK, A., PACIOREK, J. and KALUZEWSKI, S., 2001. Multidrug resistance to antibacterial drugs of Salmonella enterica subspecies enterica strains isolated in Poland in the 1998-1999 period. Med. Dosw. Mikrobiol., 53: 17-29.

TASSANAKAJON, A., PONGSOMBOON, S., RIMPHANITCHAYAKIL, V.,

JARAYABHAUD, P. and BOONSAEUG, V., 1997. Random amplified polymorphic DNA (RAPD) markers for determination of genetic variation in wild population of the black tiger prawn (Penaeus monodon) in Thailand. Mol. Man Biol. Biotechnol., 6: 110-115.

TAUXE, R. V. and PAVIA, A.T., 1998. Salmonellosis: nontyphoidal, In: EVANS, A.S.

and BRACHMAN, P. S. (Eds.), Bacterial infections of humans: epidemiology and control, 3rd ed. Plenum Medical Book Co., New York, N.Y. pp. 613– 630.

TAYLOR, W. I., 1965. Isolation of shigellae. I. Xylose-lysine agars: New media for the

isolation of enteric pathogens. Ann. J. Clin. Pathol., 44: 471-475. TENOVER, F.C., ARBEIT, R. D. and GOERING, R. V., 1995. Interpreting chromosomal

DNA restriction patterns produced by pulsed field electrophoresis. J. Clin. Microbiol., 33: 2233-2239.

Page 23: VII. REFERENCES - Shodhgangashodhganga.inflibnet.ac.in/bitstream/10603/7010/10/... · VII. REFERENCES AABO, S., RASMUSSEN, O. F., ROSSEN, L., SORENSEN, P. D. and OLSEN, J. E., 1993.

THOMASON, B. M., DODD, D. J. and CHERRY, W. B., 1977. Increased recovery of Salmonellae from environmental samples enriched with buffered peptone water. Appl. Environ. Microbiol., 34: 370-273.

THONG, K. L., GOH, Y. L. and RADU, S., 2002. Genetic diversity of clinical and

environmental strains of Salmonella enterica serotype Weltevreden isolated in Malaysia. J. Clin. Microbiol., 40: 2498-2503.

THONG, K. L., NGEOW, Y. F., ALTWEGG, M., NAVARATHNAM, P. and PANG, T.,

1995. Molecular analysis of Salmonella enteritis by pulsed field gel electrophoresis & ribotyping. J. Clin. Microbiol., 33: 1070-1074.

THRELFALL, E. J., ROWE, B. and WARD, L. R., 1993. A comparison of multiple drug

resistance in salmonellas from humans and food animals in England and Wales, 1981 and 1990. Epidemiol. Infect., 111: 189-197.

TOLLEFSON, L., ALTEKRUSE, S. F. and POTTER, M. E., 1997. Therapeutic antibiotics in

animal feeds and antibiotic resistance. Rev. Sci. Tech., 16: 709-715. TOSINI, F., VISCA, P., LUZZI, I., DIONISI, A. M., PEZZELLA, C., PETRUCCA, A.

and CARATTOLI, A.,1998. Class 1 integron-borne multiple-antibiotic resistance carried by IncFI and IncL/M plasmids in Salmonella enterica serotype Typhimurium, Antimicrob. Agents Chemother., 42 : 3053-3058.

TOWNSEND, S. M., KRAMER, N. E., EDWARDS, R., BAKER, S., HAMLIN, N.,

SIMMONDS, M., STEVENS, K., MALOY, S., PARKHILL, J., DOUGAN, G. and BAUMLER, A. J., 2001. Salmonella enterica serovar Typhi possesses a unique repertoire of fimbrial gene sequences. Infect. Immun., 69: 2894–2901.

TRKOV, M. I., MAJERIKOVA, B., JERASEK, A., STEFANOVICOVA, A., RIJPENS, N.

and KUCHTA, T., 1999. Detection of Salmonella in food over 30 h using enrichment and polymerase chain reaction. Food Microbiol., 16: 393–399.

TSEN, H., HU, H. H., LIN, J. S., HUANG, C. H. and WANG, T. K., 2000. Analysis of the

Salmonella typhimurium isolates from food poisoning cases by molecular subtyping methods. Food Microbiol., 17: 143-152.

Van der VELDEN, A. W., LINDGREN, S. W., WORLEY, M. J. and HEFFRON, F., 2000.

Salmonella pathogenicity island 1-independent induction of apoptosis in infected macrophages by Salmonella enterica serotype typhimurium. Infect. Immun., 68: 5702-5709.

Van LEUSDEN, F. M., Van SCHOTHORST, M. and BECKERS, H. J., 1982. The standard

Salmonella isolation method. In: CORRY, J.E.L., ROBERTS, T.A. and SKINNER, F.A., (Eds.), Isolation and Identification Methods for Food Poisoning Organisms Academic Press, London. pp. 67-83.

VANTARAKIS, A., KOMNINOU, G., VENIERI, D. and PAPAPETROPOOLU, M., 2000.

Development of a multiplex PCR detection of Salmonella spp. and Shigella spp. in oysters. Lett. Appl. Microbiol., 31: 105-109.

Page 24: VII. REFERENCES - Shodhgangashodhganga.inflibnet.ac.in/bitstream/10603/7010/10/... · VII. REFERENCES AABO, S., RASMUSSEN, O. F., ROSSEN, L., SORENSEN, P. D. and OLSEN, J. E., 1993.

VARNAM, A. H. and EVANS, M. G., 1991. Salmonella In: VARNAM, A. H. and EVANS, M. G. (Eds), Food borne pathogens-An illustrated text. Wolfe Publishing Ltd, Aylesbury. pp. 51-86.

VERSALOVIC, J., KOEUTH, T., Le LUPSBI, J. R., 1991. Distribution of repetitive DNA

sequences in eubacteria and application to fingerprinting of bacterial genomes. Nucl. Acids Res., 19: 6823-6831.

WALLIS, T. S. and GALYOV, E. E., 2000. Molecular basis of Salmonella-induced

enteritis. Mol. Microbiol., 36: 997–1005. WAN, J., KING, K., CRAVEN, H., McAULEY, C., TAN, S. E. and COVENTRY, M. J.,

2000. ProbeliaTM PCR system for rapid detection of Salmonella in milk powder and ricotta cheese. Lett. Appl. Microbiol., 30: 267-271.

WATERMAN, S. R. and HOLDEN, D. W., 2003. Functions and effectors of the Salmonella

pathogenicity island 2 type III secretion system. Cell. Microbiol., 5: 501-511. WATSON, P., GAUTIER, A., PAULIN, S., BLAND, A., JONES, P. and WALLIS, T., 2000.

Salmonella enterica serovars Typhimurium and Dublin can lyse macrophages by a mechanism distinct from apoptosis. Infect. Immun., 68: 3744-3747.

WAY, J. S., JOSEPHSON, K. L., PILLAI, S. D., ABBASZADEGAN, M., GERBA, C. P.

and PEPPER, I. L., 1993. Specific detection of Salmonella spp. by multiplex polymerase chain reaction. Appl. Environ. Microbiol., 59: 1473-1479.

WELSH, J. and MCCLELLAND, M., 1991. Genomic finger printing using arbitrarily primed

PCR and a matrix of pair wise combinations of primers. Nucl. Acids Res., 19: 5275-5279.

WHITE, P. B., 1926. Further studies on Salmonella species. In: Great Britain Medical

Research Special report No 10, Her Majesty’s Stationary Office, London, pp. 24-32. WHYTE, P., McGILL, K., COLLINS, J. D. and GORMLEY, E., 2002. The presence and

PCR detection of Salmonella in raw poultry. Vet. Microbiol., 89: 53-60. WILLIAMS, J. G. K., KUBELIK, A. R., LIVAK, K. J., RAFALSKI, J. A. and TINGEY, S.

V., 1990. DNA polymorphism amplified arbitary primers are useful as genetic markers. Nucl. Acids Res., 18: 6531-6535.

WILSON, I. G. and MOORE, J.E., 1996. Presence of Salmonella spp. and Campylobacter

spp. in shellfish. Epidemiol. Infect., 116: 147-153. WILSON, W. J. and BLAIR, E. M. M., 1927. Use of glucose bismuth sulphite iron medium

for the isolation of B. typhosus and B. proteus. J. Hyg., 26: 374-391. WINFIELD, D. M. and GROISMAN, E. A., 2003. Role of non-host environments in the life

style of Salmonella and Escherichia coli. Appl. Environ. Microbiol., 69: 3687-3694. WOLCOTT, M.J., 1991. DNA-based rapid methods for the detection of foodborne

pathogens. J. Food Prot., 54: 387-401.

Page 25: VII. REFERENCES - Shodhgangashodhganga.inflibnet.ac.in/bitstream/10603/7010/10/... · VII. REFERENCES AABO, S., RASMUSSEN, O. F., ROSSEN, L., SORENSEN, P. D. and OLSEN, J. E., 1993.

WOOD, M. W., ROSQUIST, R., MULLAN, P. B., EDWARDS, M. H. and GALYOV, E. E., 1996. SopE, a secreted protein of Salmonella dublin is translocated into target eukaryotic cell via a Sip-dependent mechanism and promotes bacterial entry. Mol. Microbiol., 22: 327-338.

WORLD HEALTH ORGANISATION, 2005. Global Salm – Surv Strategic Plan. Report of a

WHO meeting. Copenhagen, Denmark. XUE, L., FLETCHER, G. and TOLKOVSKY, A., 1999. Autophagy is activated by apoptotic

signaling in sympathetic neurons: an alternative mechanism of death execution. Mol. Cell Neurosci., 14:180-198.

YASIN, R. Y., CHEAH, C. T. and JEGATHESAN, 1995. Human salmonellosis in Malaysia

for the period 1989-July 1994. South East Asian J. Trop. Med. Pub. Health., 26: 457-460.

ZHANG, X. L., MORRIS, C. and HACKETT, J., 1997. Molecular cloning, nucleotide

sequence, and function of a site-specific recombinase encoded in the major pathogenicity island’ of Salmonella typhi. Gene, 202: 139–146.

ZHANG, S., ADAMS, L. G., NUNES, J., KHARE, S., TSOLIS, R. M. and BAUMLER, A.

J., 2003a. Secreted effector proteins of Salmonella enterica serotype Typhimurium elicit host specific chemokine profiles in animal models of Typhoid fever and enterocolitis. Infect. Immun., 71: 4795-803.

ZHAO, S., DATTA, A. R., AYERS, S., FRIEDMAN, S., WALKER, R. D. and WHITE, D.

G., 2001a. Antimicrobial–resistant Salmonella serovars isolated from imported foods. Int. J. Food Microbiol., 84: 87-92.

ZHAO, S., WHITE, D.G., GE, B., AYERS, S., FRIEDMAN, S., ENGLISH, L., WAGNER,

D., GAINES, S. and MENG, J., 2001b. Identification and characterization of integron-mediated antibiotic resistance among shiga toxin producing Escherichia coli isolates. Appl. Environ. Microbiol., 67: 1558-1564.