Cancer Outcomes Research Seminar January 24, 2017...Jan 24, 2017 · seamlessly embedded in the...
Transcript of Cancer Outcomes Research Seminar January 24, 2017...Jan 24, 2017 · seamlessly embedded in the...
ASCO’s CancerLinQ: Big Data
for Quality Benchmarking and
Discovery
Robert S. Miller MD, FACP, FASCOAmerican Society of Clinical Oncology
Vice President and Medical Director
CancerLinQ
UNC Lineberger
Comprehensive Cancer Center
Cancer Outcomes Research Seminar
January 24, 2017
CancerLinQ Mission Statement
“Empowering the oncology community
to improve quality of care and patient
outcomes through transformational data
analytics.”
ORIGINS AND RATIONALE
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The promise of a rapid learning health system
“… a system in which science, informatics, incentives, and culture are aligned for continuous improvement and innovation—with best practices seamlessly embedded in the delivery process and new knowledge captured as a by-product of the delivery experience”
Best Care at Lower Cost: The Path to Continuously Learning Health Care in America – September 6, 2012
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1. Big Data – The Transformation of Cancer Care through
Health IT
2. Cancer “-omics” – Precision Medicine Realized
3. Resources – From Cost to Value in Cancer Care
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In the age of too much information…
Source: Journal of Clinical Oncology 2010
Increase in clinical data relative to human cognitive capacity
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Getting to the data
97%of patient data
locked away in unconnected
files and servers
1.7people diagnosed with
cancer in the US
MM
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What if…
We could bring all the electronic data that is collected from the every day care of every cancer patient into
one rapid learning network?
Mar: ASCO BOD establishes strategic principles for Rapid Learning System
Jun: Quality Department established
Sep: RLS Advisory Group
Feb: Branding as “CancerLinQ”
May: RLS business plan
written
Dec: Breast caprototype built & presented at
QCS
Apr: Data governance & advisory committees
created
Aug: ASCO BOD approves budget for full
build
Sep: Requirements
gathering begins
Apr: RFP for CLQ build issue
Jul: Vendor meetings and
scope adjustment
Dec: SAP selected to build CLQ
CLQ origins: timeline
2011
2012
2013
2014
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CancerLinQ regulatory underpinnings
Compliant with HIPAA, HITECH, and the Common Rule
HIPAA permits disclosure of PHI under “healthcare
operations” including quality assessment and improvement,
evaluation of outcomes, and development and maintenance
of clinical practice guidelines ≠ research (individual patient
consent not required)
Independent IRB determination 2013 – Since initial data
collection performed for quality assessment purposes, activity
does not constitute research
Patient opt-out at practice level
ARCHITECTURE/FEATURES/
CURRENT STATE
14
ASCO & CancerLinQ
Leading professional
organization representing
physicians caring for those with
cancer
>42,000 members from 100+
countries
Mission: Conquering cancer
though research, education,
and promotion of the highest
quality patient care
Not-for-profit subsidiary of ASCO
Dedicated staff and governing
board
Mission: Empowering the
oncology community to improve
quality of care and patient
outcomes through
transformational data analytics
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SAP: Key stats
$22.2B+ SAP revenue worldwide
#1Enterprise software
261,000customers in 190 countries
68,000+employees worldwide
74%world’s transaction revenue
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SAP partnership
ASCO
• Overall development of CancerLinQ
• Control over the data, services,
and products that stem from CancerLinQ
• Oncology subject matter expertise
SAP
• Access to SAP healthcare technical platform
• Customized tools unique to CancerLinQ’s
needs
• Engineering, development, and other
technical support
• World class secure hosting facility
ASCO and SAP have engaged in a strategic technology
partnership to develop and deploy the CancerLinQ platform
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How CancerLinQ works
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2
3
4
1
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CancerLinQ data architecture
Collaborator
specific
private
clouds
Third
party data
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Key functions & capabilities
Quality performance indicators: real-time clinical quality metrics,
prospective opportunities to improve performance
CancerLinQ Insights: valuable insights and trends from the
aggregated, de-identified database
Visualized timeline: a longitudinal view of oncologic milestones in a
patient’s clinical event history, to construct a patient’s story
Powerful analytic reports: suite of analytic reports for quick
observations and insights of the practice patient population at a glance
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New emphasis on quality measurement and reporting
• Measurement and reporting requirements placing great stress and
burden on clinicians
Quality Payment Program (QPP)
Merit-based Incentive Payment System (MIPS)
Value Modifier
PQRS
MACRA
EHR Incentive Program
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CLQ for quality reporting
Based on ASCO QOPI measures
CLQ Quality Performance Indicators = eCQMs run
against practice EHR data (no manual data abstraction)
eCQMs are SQL representations/calculations built using
SAP CML app (“Clinical Measurement Library”) and
displayed using SAP CMA app (“Clinical Measurement
Analysis”)
% concordance scores generated at individual and
practice levels
Capture My Priority Patients (“actionable patients” who
require an intervention within a specified time frame)
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CLQ e-measures - current
Measure QOPI #MIPS (Oncology
Measure Set)QCDR 2017
Submissions
HER2/neu Test for Breast Cancer Breast 54 x
Her2 Negative and No Trastuzumab Breast 56a x x
% of patients with AJCC Stage IA (T1c) and IB-III ER or PR Positive
Breast cancer receiving Tamoxifen or AI within 1 year of diagnosis
(adapted from NQF #0220 and #0387)
Breast 59
Adj Chemo for Stage III Colon Colon 68 x
Rectal Cancer Chemotherapy Colon 72
Staging Documented within 31 Days of 1st Office Visit Core 2 x
Pain Assessment Core 3
Pain Intensity Quantified Core 4a x x
Smoking/Tobacco Documented in Past Year Core 21aa x x
GCSF with Chemotherapy Stage IV Core 25e x
Chemotherapy Administration during Last 2 Weeks EoL 48 x x
HepB Ag/Core Ab test before Rituximab NHL 78
Combination Chemotherapy Received for Breast Cancer Breast 53 x
Trastuzumab Received Breast 57 x
Pain Intensity Last 2 Visits Before Death Eol 36a x
Corticosteroids + Serotonin Antagonists Prescribed SympTox 27
Anti-emetic for High-Risk Chemotherapy SympTox 29a
Anti-emetic for Medium-Risk Chemotherapy SympTox 29c
Inst
alle
d S
et
Implementation philosophy
No connection charges or annual fees = FREE
No data entry requirements for participating practices
Source system agnostic – any EHR
Data retrieved “as is;” we provide the rules and ontology
services to normalize data
CancerLinQ provides all resources for project management,
training, testing, and application support
Our focus is to have minimal impact on your practice
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CLQ system integrations
Allscripts
Cerner
CureMD
Epic (Clarity, CDA)
GE Centricity
IKnowMed
Intrinsiq
MOSAIQ
NextGen
OncoEMR
Aria/Varian
Proprietary/Other
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Data ingestion
Patient Demographics Care Plans
Provider Characteristics Medications
Encounters Radiology
Diagnosis Radiation Therapy
Staging Surgical Procedures
Pathology Post-therapy Care and Surveillance
Physical Exams and Assessments Notes and Documents
Laboratory Tests
CancerLinQ collects a broad range of clinical data
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CancerLinQ clinical user portal
My Favorites
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Quality Performance Indicators
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CancerLinQ Insights (CLQI)
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CancerLinQ Patient Timeline
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CancerLinQ progress to date
78practices/
cancer centers
~1800oncologists
15 EHRs
represented>1.5M
patient records
in data lake
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Bringing together the leading institutions in the field…
…to improve quality and care for all
CANCERLINQ COMMUNITY:
3RD PARTY DATA ACCESS
CancerLinQ as convener of the oncologycommunity
Data
SourcesPractice
Structured &
Unstructured
Clinical Data
Additional
Structured
Data
PRO Data
Radonc data
Claims Data
Genomic
Sequencing
Data
Sister
Societies,
Oncology
Initiatives,
Federal;
State
International
Data
Patients &
Clinicians
Beneficiaries
Life Sciences
Sister
Societies
Payors
Fed & State
Agencies
Research &
Academic
Institutions
International
Cancer
Centers
Shaping the Future of
Cancer Care Through
Data Driven Decisions
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New era of data-sharing
“CancerLinQ needs to go faster.”
-VP Biden, ASCO 2016
“CancerLinQ supports ASCO’s
mission to deliver quality care to a
broad range of patients by rapidly
extracting and learning from
everyday records.”
Clifford Hudis, MD, ASCO CEO
Jim Young/Reuters
Assembling the coalition
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PT IDMD ID
Location
Approved Cohort
CLQ Analytic Database
Approved Cohort
CLQ Approved Query Tool Custom Created
Special Purpose Sub-Cohorts
CancerLinQ Discovery ™ Data Access Policy
External Queries
1. All data is statistically de-identified and anonymized
2. Access to the entire database is forbidden
3. Access is granted only to approved sub-cohorts; only minimum-necessary data provided
4. CLQ provides eithera. Analytic reports; orb. Controlled, cloud-based access
to defined cohorts using approved analytics software (R, SAS, Python scripts, custom, etc.)
5. All queries approved by Research and Publications Committee
6. Detailed clinical data never passes out of CLQ control
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Research & Publications Committee reviews and approves all
3rd party data access per policy
R&P Committee reviews the resulting abstract or paper to be
sure it conforms to the approved query
• Not peer review; no validation of the research
Research and publication review
R&P Committee ReviewsResearch Requests
Criteria: further mission, data fit for purpose, qualified analytic
team, dissemination plan
Research Study
R&P Committee ReviewsFirst Research Publication
Criteria: consistent with original proposal, data accurately
described, no endorsement
THE CHALLENGES OF BIG DATA
AND RWE
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Big data “V’s”
Volume: Millions of rows, thousands of columns
exceed traditional relational database capacity
Variety: data types (structure, standardization,
ontologies)
Velocity: data refresh frequency (real-time, timeliness)
Veracity: data quality (accuracy, completeness)
Value: add-value of data (cost, workflow, feasibility,
governance)
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Data is organized by individual patient
Data standards inconsistently utilized
Structured data often omits key oncology data
elements, e.g., stage, tumor response
Complex concepts in narrative text format
Inconsistent and variable data capture
Lack of interoperability
Information blocking
Data aggregation challenges
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• Documentation
• Incomplete, Inaccurate
• Structured v Unstructured
• Gaps in Data Mapping
• Data Translation/Harmonization
Practice
EHR
CLQ
Reports
CLQ
Connect
CLQ
“Data
Lake”
CLQ Data
Transformations
&
Harmonization
CLQ
“Analytic
Files”
CLQ data quality:
Potential points of failure
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How CancerLinQ is addressing data quality
1. Formalized data quality reviews and testing with practices
2. Working with Evidera (a leading commercial HEOR and data
analytics company) for data remediation and conversion to
the “OMOP” (Observational Medical Outcomes Partnership)
Common Data Model
3. Incorporation of natural language processing technology
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CLQ data quality reviews with practice
onboarding
1. Structural and content inventory (expected data elements &
values?)
2. Harmonization and codification to appropriate vocabularies:
• Demographics: HL7
• Diagnoses: ICD-9/ICD-10
• Staging: AJCC, others
• Pathology Assessments: ICD-O-3
• Labs and Biomarkers: LOINC
• Treatment Regimens: NCIm
• Assessments, Clinical Trials: SNOMED-CT
• Medications: RxNORM, SNOMED-CT, ATC
3. Practice data performance review (e.g., do the quality
measures return meaningful results?)
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n= 11,789
4548/11,789 =
38.6%
Care goals in structured fields
( ~12K lung ca pts) = gaps!
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Natural language processing
Addressing “gaps” in structured data by evaluating
unstructured data:
• Clinical notes, surgical pathology, imaging reports
Priority domains:• Staging
• Biomarkers
• Adverse events
• Disease progression
47© 2016 SAP SE or an SAP affiliate company. All rights reserved.
Scatter plot of sensitivity or recall results reported for group 1 studies.(Studies using an existing classification, vocabulary, or terminology system)
Mary H Stanfill et al. A systematic literature review of automated clinical coding and classification systems. J Am Med Inform Assoc2010;17:646-651
© 2010, Published by the BMJ Publishing Group Limited.
SourceEHR #4
SourceEHR #5
Staging Database
ClinicalDatabase
NLP Rules
Intermediate Database
with curated data
Use-casespecific
interface
NLP-assisted human curation
Vendor
CancerLinQ
Data feedsto
CLQClients/Partners
InformaticsTeamRules
Engine
SourceEHR #2
SourceEHR #3
SourceEHR #1
MedicalCuration
Team
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Real World Evidence (RWE)
N Engl J Med 2016; 375:2293-229712/8/16
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Sources of RWD
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RCT evidence
Advantages Disadvantages
Complete
Accurate
Unbiased
Specified intervention
Standardized outcome
measures
Reflects “what can work”
(efficacy)
Slow, costly to obtain
Applies only to population
studied
Uninformative for older,
sicker patients seen in
practice
Control group may not
reflect contemporary
practice
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Real world evidence
Advantages Disadvantages
Captures outcomes of
patients in usual practice
setting
Responsive to changes in
practice
Readily available, quickly
Reflects “what does work”
(effectiveness)
Subject to bias
May be incomplete
Quality uncertain
Data elements and
outcome measures not
standardized
Heterogeneous population
may mask treatment effect
Hypothesis-generating
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What to believe?
RCT RWE
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Both essential to fill information gaps!
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But RWE challenges remain
How to define and capture RWE endpoints:• OS
• PFS
• TOT
• RR (RECIST vs clinician assessment)
• AEs
• PROs
Consent issues (opt-out vs. opt-in)
What high priority content areas are well-suited to
queries using RWE >> clinical trials?
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How can CancerLinQ transform clinical research?
Hypothesis generation from observational data, e.g., off-
label use, risk stratification
Patterns of care and trend analysis
Cohort identification, frequency of target pop.
Cohort assembly, location of target pop.
Eligibility assessment, trial matching
Registry-driven RCTs
Comparative effectiveness assessments
Treatment simulations
Collection of PROs
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CER in CancerLinQ - examples
Compare non-drug interventions in similar indications, e.g.,
treatment of liver mets
Compare outcomes for drugs within indication, e.g., treatment
of kidney cancer or myeloma
Compare outcomes of drugs used in populations excluded
from clinical trials, e.g., elderly, poor organ function, co-
morbidities
Compare outcomes of treatment decisions based on LDTs vs.
CDTs
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Personalized.
Predictive.
Precise.
Powerful.
Patient-
Driven.
What makes CancerLinQ unique?
CancerLinQ is being created by oncologists – for the oncology
community worldwide – to improve the quality of patient care
CancerLinQ incorporates ASCO’s practice guidelines and
QOPI quality measures. The real world evidence and
outcomes captured as part of the learning health system will
be linked back to the same guidelines and measures and
inform their development.
The CancerLinQ dataset is evolving into the largest and most
robust source of RWE ever assembled in oncology for CER
and discovery.
CancerLinQ is guided by ASCO’s mission to support all
physicians, in every community and every setting.
Thank You