Authoring, peer-review and publication in one place, for the first time! Pensoft Journal System (PJS...

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Authoring, peer-review and publication in one place, for the first time! Pensoft Journal System (PJS 2.0) Lyubomir Penev ViBRANT OASPA Conference, Riga, 18-20 Sep 2013

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Pensoft Journal System (PJS 2.0) presented by Lyubomir Penev at the OASPA Conference, Riga, 18-20 Sep 2013

Transcript of Authoring, peer-review and publication in one place, for the first time! Pensoft Journal System (PJS...

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Authoring, peer-review and publication in one

place, for the first time!Pensoft Journal System (PJS 2.0)

Lyubomir Penev

ViBRANT

OASPA Conference, Riga, 18-20 Sep 2013

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The “Publishing Bottleneck (in Biodiversity)”?

What is that?

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Massive sampling/data gathering

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‘Dark species’ increase dramatically!

Rod Page, iPhylo blogspot, 12 April 2011

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The paper/PDF impediment

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… the burden or OCR, double-keying and markup of paper/PDF literature

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The “impact factor” pressure

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The “peer review” pressure

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Low uptake of open data publishing/sharing

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Source: Wikipedia

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Primary data

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A solution?

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Primary data

Publishing and sharing of primary data

RE-USEof

CONTENT

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Launch date

http://biodiversitydatajournal.com

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Novel conceptsAuthoring, reviewing and publishing in one place, for the first time!Detailed upfront markup!“Small” datasets imported in and downloadable from text Large datasets published as data papers Text stored and treated as dataCommunity peer-reviewed and community owned interoperable data Narrative (text) and data integrated publishing

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How we do that?

COMMUNITY PEER-REVIEW (PENSOFT JOURNAL

SYSTEM 2.0)

COLLABORATIVE ARTICLE AUTHORING (PENSOFT WRITING

TOOL)

MANUSCRIPT PUBLISHEDXML TEXT + DATA

Authors, Reviewers, Editors, Mentors, Copyeditors

Automatedsubmission

Revisions online

ARTICLESOccurr-

ence dataTaxon namesTaxon treatments

Plazi Wiki COL

Biblio-graphies

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Novel work flows

AuthoringPeer-review and editorial managerPublishing and dissemination

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Article templates

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Classifications

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Inivte a co-author

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External links

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Import tabular data

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Template

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Data converted into text

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Compose plates

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Pick up a reference

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Cite a reference

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Novel work flows

AuthoringPeer-review and editorial managerPublishing and dissemination

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Community and public peer-review

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Now imagine…

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Consolidated Review Version

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Novel work flow

AuthoringPeer-review and editorial managerPublishing and dissemination

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Article metadata

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Download data

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Map distributions

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Taxon names and their usages

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Taxon profile

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Taxon profile

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Tables and Figures

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Tables and Figures

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Tables and Figures

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References

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No author guidelines! The tool will guide

you!

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Authors do not need to markup or

hyperlink anything!

PWT does this for you!

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Embedded copyeditor?

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Layout stage skipped!

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LOW COST!

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Why a new journal?

BDJ is not just a new journalNeither it is a conventional data journal!

A pilot work flow and infrastructure to mobilize, review, publish, store,

disseminate, make interoperable, collate and re-use data

through the act of scholarly publishing!

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Imagine how data (if published in this way) can be re-

used…

… across different domains….

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XML on GitHub

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I Open Access!

PLAZI

Implementation in other domains welcome!

[email protected]

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Drawings: slavenapeneva.com