WRB is the receptor for TRC40/Asna1-mediated insertion of ...(Favaloro et al., 2008). TRC40 is a...

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Research Article 1301 Introduction Tail-anchored (TA) proteins span the lipid bilayer with their C- terminal transmembrane domain (TMD) and expose the N-terminal domain to the cytoplasm (Kutay et al., 1995; Kutay et al., 1993). They are post-translationally inserted into the membrane of the endoplasmic reticulum (ER) or the outer membrane of mitochondria and chloroplasts (Borgese et al., 2007; Borgese and Fasana, 2010). Post-translational targeting of TA proteins usually involves chaperones, targeting factors and receptors in the destination membrane. Recently, a distinct targeting pathway for the insertion of TA proteins into the membrane of the ER was discovered in mammalian cells that exploits as a central component the targeting factor TRC40 (Stefanovic and Hegde, 2007), also called Asna1 (Favaloro et al., 2008). TRC40 is a conserved cytosolic ATPase that recognizes the TMD of TA proteins and delivers them to the ER membrane for insertion (Favaloro et al., 2008; Stefanovic and Hegde, 2007). Among the TA proteins targeted by the TRC40 pathway are components of the Sec61 translocation channel (Sec61), ribosome-associated membrane protein 4 (RAMP4) and SNAREs involved in vesicular trafficking TRC40-mediated insertion of TA proteins requires a receptor at the ER membrane that is currently unknown (Favaloro et al., 2010; Schuldiner et al., 2008; Stefanovic and Hegde, 2007). In yeast, the structural and functional homolog of TRC40 is called Get3 (guided entry of TA proteins). Crystal structures of this protein reveal how a Get3 dimer might interact with TA proteins and deliver them in an ATP-dependent manner to the ER membrane (Bozkurt et al., 2009; Mateja et al., 2009; Suloway et al., 2009; Yamagata et al., 2010). Using genetics and biochemical approaches, additional components of the yeast Get pathway have been identified and partially characterized (Jonikas et al., 2009; Schuldiner et al., 2008). Get4 and Get5 have been proposed to function together with the tetratricopeptide-repeat-containing protein Sgt2 in the efficient capture of newly synthesized TA proteins at the ribosome and their delivery to Get3 (Chang et al., 2010; Leznicki et al., 2010; Simpson et al., 2010). Get1 and Get2 are transmembrane proteins that associate in a hetero-oligomeric complex and recruit Get3 to the ER membrane (Jonikas et al., 2009; Schuldiner et al., 2008). On the basis of sequence similarity, WRB (tryptophan-rich basic protein), also called CHD5 (congenital heart disease 5 protein), has been suggested as the possible mammalian homologue of Get1 (Borgese and Fasana, 2010; Rabu et al., 2009; Schuldiner et al., 2008), but no experimental evidence has yet been provided. Furthermore, a previous study has suggested a nuclear localization of WRB (Egeo et al., 1998). Here, we provide several lines of evidence that WRB is the receptor, or part of the receptor complex, for TRC40- mediated membrane insertion of TA proteins at the ER and that its coiled-coil domain functions as docking site for TRC40. Results WRB shows sequence similarity to yeast Get1 TRC40 (Get3)-mediated targeting and membrane insertion of TA proteins involves a receptor at the ER membrane (Favaloro et al., 2010; Schuldiner et al., 2008; Stefanovic and Hegde, 2007). Summary Tail-anchored (TA) proteins are post-translationally targeted to and inserted into the endoplasmic reticulum (ER) membrane through their single C-terminal transmembrane domain. Membrane insertion of TA proteins in mammalian cells is mediated by the ATPase TRC40/Asna1 (Get3 in yeast) and a receptor in the ER membrane. We have identified tryptophan-rich basic protein (WRB), also known as congenital heart disease protein 5 (CHD5), as the ER membrane receptor for TRC40/Asna1. WRB shows sequence similarity to Get1, a subunit of the membrane receptor complex for yeast Get3. Using biochemical and cell imaging approaches, we demonstrate that WRB is an ER-resident membrane protein that interacts with TRC40/Asna1 and recruits it to the ER membrane. We identify the coiled-coil domain of WRB as the binding site for TRC40/Asna1 and show that a soluble form of the coiled-coil domain interferes with TRC40/Asna1-mediated membrane insertion of TA proteins. The identification of WRB as a component of the TRC (Get) pathway for membrane insertion of TA proteins raises new questions concerning the proposed roles of WRB (CHD5) in congenital heart disease, and heart and eye development. Key words: WRB, Get1, TRC40/Asna1, Endoplasmic reticulum, Tail-anchored proteins This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial Share Alike License (http://creativecommons.org/licenses/by-nc- sa/3.0), which permits unrestricted non-commercial use, distribution and reproduction in any medium provided that the original work is properly cited and all further distributions of the work or adaptation are subject to the same Creative Commons License terms. Accepted 21 December 2010 Journal of Cell Science 124, 1301-1307 © 2011. Published by The Company of Biologists Ltd doi:10.1242/jcs.084277 WRB is the receptor for TRC40/Asna1-mediated insertion of tail-anchored proteins into the ER membrane Fabio Vilardi, Holger Lorenz and Bernhard Dobberstein* Zentrum für Molekulare Biologie der Universität Heidelberg (ZMBH), DKFZ-ZMBH Allianz, INF282, 69120 Heidelberg, Germany *Author for correspondence ([email protected]) Journal of Cell Science

Transcript of WRB is the receptor for TRC40/Asna1-mediated insertion of ...(Favaloro et al., 2008). TRC40 is a...

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Research Article 1301

IntroductionTail-anchored (TA) proteins span the lipid bilayer with their C-terminal transmembrane domain (TMD) and expose the N-terminaldomain to the cytoplasm (Kutay et al., 1995; Kutay et al., 1993).They are post-translationally inserted into the membrane of theendoplasmic reticulum (ER) or the outer membrane of mitochondriaand chloroplasts (Borgese et al., 2007; Borgese and Fasana, 2010).Post-translational targeting of TA proteins usually involveschaperones, targeting factors and receptors in the destinationmembrane. Recently, a distinct targeting pathway for the insertionof TA proteins into the membrane of the ER was discovered inmammalian cells that exploits as a central component the targetingfactor TRC40 (Stefanovic and Hegde, 2007), also called Asna1(Favaloro et al., 2008). TRC40 is a conserved cytosolic ATPasethat recognizes the TMD of TA proteins and delivers them to theER membrane for insertion (Favaloro et al., 2008; Stefanovic andHegde, 2007). Among the TA proteins targeted by the TRC40pathway are components of the Sec61 translocation channel(Sec61), ribosome-associated membrane protein 4 (RAMP4) andSNAREs involved in vesicular trafficking

TRC40-mediated insertion of TA proteins requires a receptor atthe ER membrane that is currently unknown (Favaloro et al.,2010; Schuldiner et al., 2008; Stefanovic and Hegde, 2007). Inyeast, the structural and functional homolog of TRC40 is calledGet3 (guided entry of TA proteins). Crystal structures of this

protein reveal how a Get3 dimer might interact with TA proteinsand deliver them in an ATP-dependent manner to the ER membrane(Bozkurt et al., 2009; Mateja et al., 2009; Suloway et al., 2009;Yamagata et al., 2010). Using genetics and biochemicalapproaches, additional components of the yeast Get pathway havebeen identified and partially characterized (Jonikas et al., 2009;Schuldiner et al., 2008). Get4 and Get5 have been proposed tofunction together with the tetratricopeptide-repeat-containingprotein Sgt2 in the efficient capture of newly synthesized TAproteins at the ribosome and their delivery to Get3 (Chang et al.,2010; Leznicki et al., 2010; Simpson et al., 2010). Get1 and Get2are transmembrane proteins that associate in a hetero-oligomericcomplex and recruit Get3 to the ER membrane (Jonikas et al.,2009; Schuldiner et al., 2008). On the basis of sequence similarity,WRB (tryptophan-rich basic protein), also called CHD5(congenital heart disease 5 protein), has been suggested as thepossible mammalian homologue of Get1 (Borgese and Fasana,2010; Rabu et al., 2009; Schuldiner et al., 2008), but noexperimental evidence has yet been provided. Furthermore, aprevious study has suggested a nuclear localization of WRB (Egeoet al., 1998). Here, we provide several lines of evidence that WRBis the receptor, or part of the receptor complex, for TRC40-mediated membrane insertion of TA proteins at the ER and thatits coiled-coil domain functions as docking site for TRC40.

ResultsWRB shows sequence similarity to yeast Get1TRC40 (Get3)-mediated targeting and membrane insertion of TAproteins involves a receptor at the ER membrane (Favaloro et al.,2010; Schuldiner et al., 2008; Stefanovic and Hegde, 2007).

SummaryTail-anchored (TA) proteins are post-translationally targeted to and inserted into the endoplasmic reticulum (ER) membrane throughtheir single C-terminal transmembrane domain. Membrane insertion of TA proteins in mammalian cells is mediated by the ATPaseTRC40/Asna1 (Get3 in yeast) and a receptor in the ER membrane. We have identified tryptophan-rich basic protein (WRB), alsoknown as congenital heart disease protein 5 (CHD5), as the ER membrane receptor for TRC40/Asna1. WRB shows sequence similarityto Get1, a subunit of the membrane receptor complex for yeast Get3. Using biochemical and cell imaging approaches, we demonstratethat WRB is an ER-resident membrane protein that interacts with TRC40/Asna1 and recruits it to the ER membrane. We identify thecoiled-coil domain of WRB as the binding site for TRC40/Asna1 and show that a soluble form of the coiled-coil domain interfereswith TRC40/Asna1-mediated membrane insertion of TA proteins. The identification of WRB as a component of the TRC (Get) pathwayfor membrane insertion of TA proteins raises new questions concerning the proposed roles of WRB (CHD5) in congenital heart disease,and heart and eye development.

Key words: WRB, Get1, TRC40/Asna1, Endoplasmic reticulum, Tail-anchored proteins

This is an Open Access article distributed under the terms of the Creative CommonsAttribution Non-Commercial Share Alike License (http://creativecommons.org/licenses/by-nc-sa/3.0), which permits unrestricted non-commercial use, distribution and reproduction in anymedium provided that the original work is properly cited and all further distributions of thework or adaptation are subject to the same Creative Commons License terms.

Accepted 21 December 2010Journal of Cell Science 124, 1301-1307 © 2011. Published by The Company of Biologists Ltddoi:10.1242/jcs.084277

WRB is the receptor for TRC40/Asna1-mediatedinsertion of tail-anchored proteins into the ERmembraneFabio Vilardi, Holger Lorenz and Bernhard Dobberstein*Zentrum für Molekulare Biologie der Universität Heidelberg (ZMBH), DKFZ-ZMBH Allianz, INF282, 69120 Heidelberg, Germany*Author for correspondence ([email protected])

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Although such a receptor has been identified for yeast Get3 as theheterodimeric Get1–Get2 complex, orthologs in higher eukaryotesare still unknown. Based on sequence similarity (Fig. 1A),tryptophan-rich basic protein (WRB) has been suggested as acandidate for the mammalian ortholog of Get1 (Borgese and Fasana,2010; Rabu et al., 2009; Schuldiner et al., 2008). WRB has threepredicted TMDs and a cytosolically exposed coiled-coil domain(UniProtKB/Swiss-Prot O00258) (Fig. 1B,C). The coiled-coildomain shows the highest degree of conservation (23% identity,49% similarity) between Homo sapiens WRB and Saccharomycespombe Get1.

WRB is an ER-resident membrane proteinTo further characterize WRB and find out whether it functions asa receptor for TRC40 at the ER membrane, we raised antibodiesin rabbits against two peptides of the coiled-coil domain of WRB(WRBcc) (Fig. 1B). These anti-WRB antibodies specificallyrecognized on western blots of cell lysates 19 kDa HA-taggedforms of WRB, which were also recognized by an anti-HA antibody(Fig. 2A, lanes 5–6 and 8–9). Besides the 19 kDa protein, smallermolecular weight forms of HA–WRB and WRB–HA wererecognized by the WRB antibodies (Fig. 2A, lanes 5–6). As thecalculated molecular weight of WRB is 19 kDa, we conclude thatthe 19 kDa forms are the full-length WRB proteins and suggestthat the faster migrating versions represent incomplete forms ordegradation intermediates of WRB.

To see whether WRB localizes to the membrane fraction ofmammalian cells, we permeabilized HeLa cells transfected withWRB–HA using digitonin to release the cytosolic content, andsolubilized membranes with Triton X-100. WRB–HA was detectedin the total cell lysate and the membrane fraction (Fig. 2B, lanes4–5). The anti-WRB antibodies were unable to detect endogenousWRB in the membranes of untransfected HeLa cells (Fig. 2B,lanes 1 to 3) and purified dog pancreas rough microsomes (datanot shown). We tested the sensitivity of the anti-WRB antibodiesin western blot analysis and applied decreasing amounts ofrecombinant WRBcc to an SDS gel. The antibodies could notdetect WRBcc protein below 50 ng (supplementary material Fig.S1). This suggests that the amount of WRB within the membranefraction of loaded HeLa cells or rough microsomes is less than 50ng (5 pmol).

To determine the cellular localization of WRB, we expressedCFP- or HA-tagged forms of WRB (WRB–CFP or WRB–HA) inRPE-1 cells and located these proteins using fluorescencemicroscopy. Cells expressing WRB–CFP displayed a reticularnetwork characteristic of the ER (Fig. 2C). The ER localizationwas confirmed by immunofluorescence analysis, in which WRB–HA was found to largely colocalize with the ER lumenal proteincalreticulin (Fig. 2D).

WRB interacts with TRC40 in a cell lysate and at the ERmembraneIt has been shown previously that TRC40-mediated membraneinsertion of TA proteins requires a receptor at the ER membrane(Favaloro et al., 2010; Schuldiner et al., 2008; Stefanovic andHegde, 2007). To see whether WRB functions as this receptor andinteracts with TRC40, we expressed TRC40 and WRB–HA eitheralone or together in HeLa cells, lysed the cells, and used an anti-TRC40, an anti-HA or an unrelated antibody (anti-myc) in co-immunoprecipitation experiments. The anti-TRC40 antibodyimmunoprecipitated TRC40 and in addition WRB–HA when bothproteins were expressed (Fig. 3A, lane 7). Conversely,immunoprecipitation with the anti-HA antibody resulted in co-immunoprecipitation of TRC40 (Fig. 3A, lane 15). This suggeststhat WRB–HA and TRC40 associate either directly or indirectlywith each other in cell lysates.

As WRB is a protein of the ER membrane and TRC40 a solublecytoplasmic protein, we asked whether TRC40 interacts with WRBat the ER membrane. To address this, we expressed YFP–TRC40alone or in combination with WRB–CFP in RPE-1 cells,permeabilized the plasma membrane with digitonin, and followedthe release of YFP–TRC40 over time using confocal microscopy.When WRB–CFP and YFP–TRC40 were co-expressed, most ofYFP–TRC40 was detectable as a diffusely distributed pool in thecytoplasm and the nucleus. Upon digitonin application, thispopulation disappeared by diffusion out of the cell, revealing apreviously hidden population of YFP– TRC40, which wasdistinctively overlapping the WRB–CFP signal (Fig. 3B, upperpanel; supplementary material Movie 1). As a control, YFP co-expressed with WRB–CFP completely diffused out of the cells afterdigitonin permeabilization (Fig. 3B, middle panel; supplementarymaterial Movie 1). When TRC40 alone was expressed, it was initially

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Fig. 1. WRB shows sequence similarity to yeast Get1. (A)Multiple sequence alignment of Get1 homologs of eukaryotic organisms. Identical residues areindicated in white on a red background and similar residues in red. Alignment was performed by ESPript software (Gouet et al., 1999). (B)Linear outline of WRB.The predicted TMDs (red bars), the coiled-coil (cc) domain and the peptides (P1 and P2) used to raise anti-WRB antibodies are indicated. (C)Predicted membranetopology of WRB.

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diffusely distributed in the cells, was still seen in the nuclei 40seconds after digitonin permeabilization and essentially disappearedfrom cells after 400 seconds (Fig. 3B, lower panel; supplementarymaterial Movie 1). This demonstrates that WRB–CFP can efficientlyrecruit YFP–TRC40 to the ER membrane, and suggests that theendogenous level of WRB is very low and insufficient to recruitdetectable amounts of TRC40 to the ER membrane.

The coiled-coil domain of WRB is the docking site forTRC40The coiled-coil domain of WRB (WRBcc) is predicted to beexposed on the cytoplasmic side of the ER [HMMTOP software(Tusnady and Simon, 2001)] and thus represents a good candidatefor a docking site for TRC40 at the ER membrane. To test whetherWRBcc alone can interact with TRC40, we expressed tagged formsof WRBcc [maltose-binding protein (MBP)–WRBcc] and TRC40(GST–TRC40), and MBP in Escherichia coli (supplementarymaterial Fig. S2), and allowed binding of MBP–WRBcc or MBPto an amylose resin. When GST–TRC40 was then passed over theresin, it was exclusively retained by the resin with bound MBP–WRBcc (Fig. 4A, lane 5). This suggests that the coiled-coil domainof WRB can directly associate with TRC40.

To see whether WRBcc can also associate with TRC40 in thecytosol of a eukaryotic cell, we co-expressed histidine-tagged WRBcc(HisWRBcc) with TRC40 in HeLa cells. We then asked whetherHisWRBcc can be co-immunoprecipitated with TRC40 and viceversa. WRBcc efficiently co-immunoprecipitated with TRC40 (Fig.4B, lane 7) and TRC40 with HisWRBcc (Fig. 4B, lane 15). Thisshows that WRBcc can also tightly interact with TRC40 in thecytosol. Taken together, these data suggest that the coiled-coil domainof WRB is the docking site for TRC40 at the ER membrane.

A recombinant coiled-coil domain of WRB interferes withTRC40-mediated insertion of TA proteins into the ERmembrane in vitroAs the coiled-coil domain of WRB is able to interact with TRC40,it might compete with ER- resident WRB for binding to TRC40and thereby interfere with membrane insertion of TA proteins. Totest the effect of WRBcc on membrane insertion of TA proteins,we expressed WRBcc in E. coli and purified it (supplementarymaterial Fig. S2). We then tested whether WRBcc affects TRC40-mediated TA protein insertion into the membrane of roughmicrosomes (RMs) derived from the pancreatic ER. A recombinantsoluble complex formed by MBP–TRC40 and the cargo TA proteinHZZ-RAMP4op was incubated in presence of RMs and ATP withincreasing amounts of WRBcc. Membrane insertion was monitoredafter SDS-PAGE by a shift in molecular mass due to glycosylation(membrane insertion) of the C-terminal opsin tag of RAMP4op, asdescribed previously (Favaloro et al., 2010) (Fig. 5A, lanes 1 and2). WRBcc interfered with HZZ-RAMP4op insertion in a dose-dependent manner (Fig. 5A, lanes 3 to 6). The amount ofglycosylated (membrane-inserted) HZZ-RAMP4op was reducedby up to 92% (Fig. 5A) when a 100-fold molar excess (10 M) ofWRBcc over MBP–TRC40–HZZ-RAMP4op was added. Addingsimilar amounts of MBP did not have any effect on membraneinsertion of HZZ-RAMP4op (Fig. 5A, lane 7).

We then asked whether WRBcc has an effect on membraneinsertion of a TA protein that can insert unassisted in vitro, but canalso associate with TRC40 (Favaloro et al., 2010). WRBcc showeddose-dependent inhibition of insertion of the TA protein cytochromeb5 (HZZ-Cb5op) when it was co-purified with TRC40 (Fig. 5B,lanes 3 to 6), whereas no significant effect on membrane insertionof HZZ-Cb5op alone could be observed (Fig. 5C, lanes 3 to 6).WRBcc also had no effect on membrane insertion of the type IImembrane protein invariant chain synthesized in vitro in thepresence of RMs (supplementary material Fig. S3).

These results suggest that WRBcc can efficiently compete withWRB at the ER membrane and specifically prevent TRC40-mediated membrane insertion of TA proteins.

1303WRB is a membrane receptor for TRC40

Fig. 2. WRB is a 19 kDa membrane protein of the ER. (A)Identification ofWRB–HA and HA–WRB. N-terminally or C-terminally HA-tagged forms ofWRB (HA–WRB or WRB–HA) were expressed in HeLa cells. Proteins wereseparated by SDS-PAGE and analyzed by immunoblotting using the pre-immune serum (lanes 1–3), the anti-WRB serum (lanes 4–6) or anti-HAantibody (lanes 7–9). The asterisks indicate incomplete WRB. (B)Membraneassociation of WRB–HA. Untransfected HeLa cells (lanes 1–3) or HeLa cellstransfected with HA–WRB (lanes 4–6) were analyzed by SDS-PAGE andimmunoblotting using anti-WRB, anti-TRAM and anti-GAPDH antibodies.HeLa cells were permeabilized with digitonin, and cell constituents separatedinto a cytosolic and membrane fractions by centrifugation. Proteins of wholecell lysate (lanes 1 and 4), membrane (lanes 2 and 5) and cytosolic fractions(lanes 3 and 6) were analyzed. (C)Localization of WRB–CFP. CFP-taggedWRB (WRB–CFP) or CFP were expressed in RPE-1 cells and visualized byfluorescence microscopy. (D)ER localization of WRB–HA. WRB–HA wasexpressed in RPE-1 cells, immunostained with an anti-HA antibody andvisualized with a fluorescent secondary antibody (red) by fluorescencemicroscopy. As an ER marker, calreticulin was visualized similarly using ananti-calreticulin antibody and a fluorescent secondary antibody (green).

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DiscussionTRC40-mediated targeting and membrane insertion of TA proteinsinvolves a receptor at the ER membrane (Favaloro et al., 2010;Schuldiner et al., 2008; Stefanovic and Hegde, 2007). Here, weprovide several lines of evidence that WRB is a component of thepostulated mammalian receptor complex for the TRC40-mediateddelivery of TA proteins to the ER membrane. WRB shares similarsequence and topology with yeast Get1, a subunit of the receptorfor Get3. Both Get1 and WRB have three predicted TMDs, and acytosolically exposed coiled-coil domain between the first and thesecond TMDs. The coiled-coil domain shows the highest degree ofconservation between H. sapiens WRB and S. pombe Get1 (23%identity, 49% similarity). Evolutionary conservation of Get1function between lower and higher eukaryotes is also suggested bythe previous finding that Get3 of C. thermophilum is able tomediate insertion of TA proteins into the membrane of canine RMs(Bozkurt et al., 2009).

We show that WRB is a membrane protein of the ER and thatit interacts with TRC40 there. In a previous study, when thesubcellular localization of the WRB protein was characterized byimmunofluorescence analysis with polyclonal antibodies (anti-peptide 33–46 of WRB), a positive signal was predominantlyobserved over the cell nucleus (Egeo et al., 1998). We have notbeen able to detect WRB in untransfected RPE-1 or HeLa cells

using our anti-WRB antibodies in immunofluorescence analysis orwestern blotting.

We demonstrate an interaction between WRB and TRC40 byco-immunoprecipitation of the two proteins and also bycolocalization of WRB–CFP with YFP–TRC40 at the ERmembrane of RPE-1 cells. WRB–CFP recruits YFP–TRC40 to theER membrane only when WRB–CFP is overexpressed. As YFP–TRC40 was not detectably recruited to the ER of untransfectedHeLa cells, this also suggests that the endogenous level of WRBis rather low.

We show that a purified coiled-coil domain of WRB canefficiently interact with TRC40. This strongly suggests that thisdomain of WRB functions as the ER membrane docking site forTRC40 and the TRC40–TA protein complex. Moreover, WRBcccan interfere with TRC40-mediated membrane insertion of RAMP4and also cytochrome b5 (Cb5), but not with TRC40- independentmembrane insertion of Cb5 or with signal recognition particle(SRP)-dependent membrane insertion of the type II membraneprotein invariant chain. This suggests that WRB is part of the ERmembrane receptor complex for TRC40-mediated membraneinsertion of TA proteins. Whereas WRB appears to be a well-conserved homolog of Get1, we could not identify by sequencesimilarity a candidate Get2 homolog in higher eukaryotes, althoughit is conserved among several yeast species. Whether WRB alone

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Fig. 3. TRC40 associates with WRB–HA at the ER. (A)Co-immunoprecipitation of WRB–HA with TRC40 (left panel) and TRC40 with WRB–HA (right panel).HeLa cells were transfected with WRB–HA alone and with WRB–HA and TRC40 (left panel), or with TRC40 alone and with WRB–HA and TRC40 (right panel).20% of the cell lysates were directly loaded onto the gel (lanes 1, 5 and 9, 13) and the rest were used for immunoprecipitation with the anti-TRC40 antibody (lanes3 and 7), the anti-HA antibody (lanes 11, 15), an unrelated antibody (anti-myc) (lanes 4, 8 and 12, 16) or without an antibody (lanes 2, 6 and 10, 14). Lysates (TOT)and immunoprecipitates (IP) were analyzed by SDS-PAGE and immunoblotting using the anti-HA (left panel) or anti-TRC40 (right panel) antibodies. The asteriskindicates light chains of anti-myc antibody. (B)Colocalization of YFP–TRC40 with WRB–CFP at the ER. WRB–CFP was co-expressed with YFP–TRC40 (upperpanel) or with YFP (middle panel), or YFP–TRC40 was expressed alone (lower panel). Cells were permeabilized with digitonin to release cytosolic content, andthe CFP (red), YFP (green) signals or both signals were recorded over time using confocal microscopy. Untreated cells or cells treated with digitonin for 40 secondsand 400 seconds are shown. Scale bars: 10m. A graphical interpretation of the colocalization of YFP–TRC40 (green) with WRB–CFP (red) is shown on top of thefigure.Jo

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is sufficient to drive TRC40-dependent membrane insertion of TAproteins or a Get2 homolog is required remains to be investigated.

WRB has been described as a tryptophan-rich basic proteinbecause of its overall basic character and its tryptophan-rich C-terminal region (Egeo et al., 1998; Murata et al., 2009). Analternative name for WRB is congenital heart disease 5 protein

(CDH5) based on the finding that the human gene encoding WRBhas been mapped to Down syndrome (DS) region-2 of chromosome21 (21q22.3), within the congenital heart disease region (Egeo etal., 1998; Korenberg et al., 1992; Vidal-Taboada et al., 1998).Human WRB (CDH5) was found to be widely expressed in adultand fetal tissues, with higher expression levels in the heart, brain,

1305WRB is a membrane receptor for TRC40

Fig. 5. Recombinant WRBcc specifically preventsTRC40-dependent membrane insertion of TA proteins.(A)WRBcc was expressed in E. coli and tested for itsability to affect TRC40-mediated membrane insertion(glycosylation) of the TA protein RAMP4op. HZZ-RAMP4op–MBP–TRC40 complexes were produced in E.coli, purified and incubated in the absence (lane 1) orpresence (lanes 2–7) of RMs, and increasing amounts ofpurified WRBcc (lanes 3–6) or MBP (lane 7). Proteinswere analyzed by SDS-PAGE and immunoblotting usinganti-opsin, anti-MBP or anti-WRB antibodies.Quantification of relative amounts of glycosylated(membrane-inserted) HZZ-RAMP4op is shown in thegraph. Error bars ± s.d. (B)Effect of WRBcc on membraneinsertion of cytochrome b5 (Cb5) co-purified with MBP–TRC40. HZZ-Cb5op–MBP–TRC40 complexes wereincubated in the absence (lane 1) or presence (lanes 2 –7) ofRMs, and increasing amounts of purified WRBcc (lanes 3–6) or MBP (lane 7). Proteins were analyzed by SDS-PAGEand immunoblotting as described above. (C)Effect ofWRBcc on membrane insertion of cytochrome b5 (Cb5).HZZ-Cb5op was incubated in the absence (lane 1) orpresence (lanes 2–7) of RMs, and increasing amounts ofpurified WRBcc (lanes 3–6) or MBP (lane 7). Proteinswere analyzed by SDS-PAGE and immunoblotting asdescribed above.

Fig. 4. WRBcc interacts with TRC40.(A)Purified GST–TRC40 and MBP–WRBcc interact with each other. MBP(lane 1) and MBP–WRBcc (lane 3)were bound to amylose resin. GST–TRC40 (lane 2) was then incubatedwith the resins, and the unbound andbound proteins characterized by SDS-PAGE and Coomassie Blue staining.(B)HisWRBcc co-immunoprecipitateswith TRC40 and TRC40 withHisWRBcc. HisWRBcc (lanes 1–4) andTRC40 (lanes 9–12) were expressedalone or together (lanes 5–8 and 13–16)in HeLa cells, and either TRC40 (leftpanel) or hisWRBcc (right panel) wasimmunoprecipitated by their respectiveantibodies (anti-TRC40 or anti-his).Co-immunoprecipitated proteins werethen characterized by western blotanalysis using the anti-his (left panel) oranti-TRC40 (right panel) antibody.

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liver, skeletal muscle and pancreas (Egeo et al., 1998). Knockingdown CHD5 (WRB) function in medaka fish (Oryzias latipes)caused severe cardiac disorder, including abnormal chamberdifferentiation, abnormal looping and eye abnormalities such ascyclops (Murata et al., 2009). It was suggested that medaka CHD5(WRB) is directly involved in the molecular mechanism of heartchamber differentiation and looping, and might be associated withbrain and eye development (Murata et al., 2009). In zebrafish, aWRB mutant (pwi) showed photoreceptor-specific retinaldegeneration (Gross et al., 2005). Our data suggest that WRB(CDH5) is involved in TA protein targeting and insertion into theER membrane. From the ER, TA proteins are distributed to allmembranes of the endomembrane system and play crucial roles innearly all aspects of cell biology (Borgese et al., 2003). Examplesof TA proteins are components of the translocation site (Sec61,RAMP4), SNAREs involved in vesicular trafficking, componentsof the membrane-bound degradation machinery, structural proteinsof the Golgi apparatus and enzymes whose activities are spatiallyrestricted in the cell (Borgese et al., 2003). Deletion or mutation ofWRB, the receptor for TRC40-mediated ER membrane insertionof TA proteins, is expected to have very pleiotropic effects relatedto irregular biosynthesis of the various TA proteins. Theidentification of WRB as a component of the membrane receptorcomplex for the TRC40-mediated insertion of TA proteins opensup the possibility to more directly investigate the role of the TRC(Get) system in, for example, early developmental processes, asobserved in the WRB mutants (Gross et al., 2005; Murata et al.,2009).

Materials and MethodsPlasmidsConstructs used in this study were obtained by standard methods and verified bysequencing. For pRK5rs-HA-WRB, WRB was amplified from pCMV-Sport6-WRB(Image Consortium, Berlin, Germany) using the primers 5�-GACCATG -AGCTCAGCCGCGGCCGACCACTG-3� and 5�-CTCAAGCGTAATCT GGA -ACATCGTATGGGTAGCTGAACGGATGAAG-3�. The fragment was cloned intopCR-II-TopoTA (Invitrogen) and then subcloned into the pRK5rs backbone.

For pRK5rs-WRB-HA, the sequence encoding WRB was amplified using theprimers 5�-GACCATGAGCTCAGCCGCGGCCGACCACTG-3 and 5�-CTCAAG -CGTAATCTGGAACATCGTATGGGTAGCTGAACGGATGAAG-3�. The fragmentwas cloned into pCR-II-TopoTA (Invitrogen) and then subcloned into the pRK5rsbackbone.

For pECFP-WRB, the sequence encoding WRB was amplified from pCMV-Sport6-WRB using the primers 5�-TATCTACTCGAGACCA TGAGCT -CAGCCGCG-3� and 5�-TAGATAGGTACCAAGCTGAAC GGATGAAG-3�, andthe fragment was cloned into the pmCerulean-N1 vector (Rizzo et al., 2004).

For pEYFP-TRC40, a BamHI-XbaI fragment originated from pCDNA3-Asna1 (akind gift from Blanche Schwappach, University of Göttingen, Germany) was clonedinto pmVenus-C1vector (Nagai et al., 2002).

For pRK5rs-hisWRBcyt, a BamHI-HindIII fragment from pQE80-WRBcc wascloned into the pRK5rs backbone.

For pQE80MBP-WRBcc, the sequence encoding the coiled-coil domain of WRBwas amplified from pCMV-Sport6-WRB using the primers 5�-TATCTAGGAT -CCTCCTTCATGTCCAGGGTG-3� and 5�-ATAGATGAAT TCTTATTTTAT CTT -GGCTAA- 3�. The fragment was cloned into pQE80 backbone (Qiagen) and thensubcloned into pQE80-MBPtev (Favaloro et al., 2010).

For pGEX-TRC40, the sequence encoding TRC40 was amplified from pCDNA3-Asna1 using the primers 5�-GAATTCTCCACCATGGCGGCAGGGGTG-3� and5�-GTATATCCCAAGCTTCTACTGGGCACTGGG-3�. The fragment was clonedinto pCR-II-TopoTA (Invitrogen) and then subcloned into the pGEX-5X-1 backbone(Amersham).

Vectors for bacterial expression of the MBP–TRC40–TA protein complexes andHZZ-Cb5op (pT5L/T7-MBP-Asna1/HZZ-R4op, pT5L/T7-MBP-Asna1/HZZ-Cb5opand pQET328-HZZ-Cb5op) were previously described (Favaloro et al., 2010).

pGEM4Z-MNCb-RAMP4 and pGem4Ii for in vitro transcription of RAMP4opand invariant chain mRNAs were previously described (Favaloro et al., 2008).

AntibodiesMouse monoclonal anti-HA is from Covance, mouse monoclonal anti-polyhistidinewas from Sigma, rabbit polyclonal anti-calreticulin from ABR, mouse monoclonal

anti-MBP from NEB, rabbit monoclonal anti-GAPDH from Cell Signaling. Mousemonoclonal anti-opsin, mouse monoclonal anti-myc, rabbit polyclonal anti-TRAMand rabbit polyclonal anti-TRC40 were previously described (Favaloro et al., 2010).The anti-WRB antibodies were raised in rabbits against two ovalbumin-conjugatedsynthetic peptides (LQKDAEQESQMRAEIQDMKQELS and ARLERKINKMT -DKLKTHVKART) by Peptide Speciality Laboratories, Heidelberg, Germany. Rabbitanti-mouse IgG and goat anti-rabbit IgG secondary antibodies were from Sigma.Fluorescent secondary antibodies Alexa-Fluor-546 goat anti-rabbit IgG and Alexa-Fluor-568 goat anti-mouse IgG were from Invitrogen.

Cell culture and transfectionHeLa cells (ATCC, CCL-2) were grown in DMEM containing 4.5 g/l glucose, 10%FBS and 2 mm L-glutamine. For western blot analysis, HeLa cells were seeded insix-well slots. 18 hours after calcium phosphate transfection (Chen and Okayama,1987), cells were supplied with fresh medium.

RPE-1 cells were grown in DMEM/F12 supplemented with 10% FBS and 2 mmL-glutamine. Cells were transiently transfected in 12-well slots with Fugene HD(Roche), as suggested by the manufacturer.

Cell lysis and western blot48 hours after transfection, HeLa cells were lysed in Triton X-100 lysis buffer(50 mM Hepes-NaOH pH 7.5, 150 mM NaCl, 1.5 mM MgCl2, 10% glycerol, 1 mMEGTA, 1 mM phenylmethylsulfonyl fluoride and 1% Triton X-100). Non-solubilizedmaterial was removed by centrifugation at 25,000 g for 10 minutes at 4°C.

For fractionation, cells were first permeabilized for 10 minutes with 0.02%digitonin (50 mM Hepes-NaOH pH 7.5, 150 mM NaCl, 1.5 mM MgCl2, 10%glycerol, 0.02% digitonin, 1 mM EGTA, 1 mM phenylmethylsulfonyl fluoride) torelease cytosolic proteins. The permeabilized cells were pelleted at 15,000 g for 10minutes at 4°C, and lysed in Triton X-100 lysis buffer to solubilize membraneproteins. Non-solubilized material was removed by centrifugation at 25,000 g for 10minutes at 4°C. Protein lysates were separated by 16.5% Tris-Tricine SDS-PAGE.For western blots, blocking and antibody incubation were done with 7% w/vskimmed milk (Carl Roth) in 1� PBS-0.02% Tween.

For densitometric analysis of the amount of glycosylated protein, ImageJ softwarewas used (NIH, http://www.rsbweb.nih.gov/ij/).

ImmunofluorescenceRPE-1 cells were fixed with 2% paraformaldehyde in PBS supplemented with 125mM sucrose for 20 minutes followed by 10 minutes incubation in 1%paraformaldehyde in PBS. Cells were then permeabilized with 0.3% Triton X-100and 0.05% SDS, and incubated for 45 minutes at room temperature with primaryantibodies (1:300 dilution). Secondary antibody incubation was performed for 45minutes at room temperature (1:500 dilution) with Alexa-Fluor-546 goat anti-rabbitIgG or Alexa-Fluor-568 goat anti-mouse IgG. Cells were mounted with Mowiol(Sigma).

MicroscopyWide-field fluorescence images (as shown in Fig. 2) were acquired with a CellRIX81 microscope system (Olympus) using an UPLSAPO 60� 1.35 numericalaperture (NA) oil objective lens and appropriate filter settings. Confocal microscopy(as shown in Fig. 3) was performed on a TCS SP2 laser-scanning system (Leica).All images were taken with a 63� 1.4 NA oil HCX Plan Apochromat objective(Leica) and identical pinhole settings of 2 airy units. For multi-channel imaging,each fluorophore was imaged sequentially in the frame-interlace mode to eliminatecross-talk between the channels. The methodology and a detailed protocol for thepermeabilization of cells with digitonin for imaging purposes have been described(Lorenz et al., 2006). Z-stacks of images were recorded over time and displayed asmaximum intensity projections.

Image processing was performed using ImageJ (NIH, http://www.rsbweb.nih.gov/ij/).

ImmunoprecipitationLysates were diluted in a 1:4 ratio with IP buffer (20 mM Hepes-NaOH pH 7.5, 150mM NaCl, 10% glycerol, 0.1% Triton X-100). Antibodies were added at 1:150 finaldilution and incubated for 2 hours. Protein A–sepharose beads (AmershamBiosciences) were added and incubated for one further hour. Beads were washed fivetimes with IP buffer and immunoprecipitated proteins were eluted with 2� SDSsample buffer.

In vitro post-translational membrane insertionIn vitro reconstitution of post-translational membrane insertion of TA proteins fromrecombinant TRC40–TA protein complexes and RM was performed as previouslydescribed (Favaloro et al., 2010). Where indicated, recombinant WRBcc was addedto the reaction mixture.

Protein expression and purificationExpression of MBP, MBP–WRBcc and GST–TRC40 was induced in BL21AI E.coli strain with 1 mM IPTG for 2 hours at 30°C. Cells were then harvested andresuspended in ice-cold LS buffer (50 mM HEPES, 150 mM KOAc, 10 mM

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MgOAc2, 10% glycerol, 1 mM PMSF, pH 7.0) containing 10 g/ml DNase I. Afterlysis with Avestin Emulsiflex-C5, aggregates were removed by centrifugation at100,000 g for 30 minutes at 4°C. For MBP and MBP–WRBcc purification, bacteriallysates was loaded onto an amylose resin (NEB) column. The resin was washed with10 volumes LS buffer containing 5 mM ATP, 10 volumes HS buffer (50 mMHEPES, 500 mM KOAc, 10 mM MgOAc2, 10% glycerol, 1 mM PMSF, pH 7.0) and10 volumes LS buffer. Proteins were eluted with LS buffer containing 20 mMmaltose.

To remove the N-terminal tag from MBP–WRBcc, the resin was incubated withhistidine-tagged TEV protease in a 1:30 w/w ratio for 2 hours at 4°C. TEV proteasewas removed by incubation with Ni-NTA resin (Qiagen). GST–TRC40 was purifiedusing GST trap HP columns (GE Healthcare), as suggested by the manufacturer, andproteins were eluted in LS buffer containing 10 mM reduced glutathione.

Purification of MBP–TRC40–TA protein complexes and HZZ-Cb5op haspreviously been described (Favaloro et al., 2010).

Pull down2 M MBP or MBP–WRBcc were bound to amylose resin (NEB) together with 2M GST–TRC40, and incubated for 1 hour in the cold with gentle shaking. Boundand unbound proteins were analyzed by SDS-PAGE and Coomassie Blue staining.

In vitro transcription and translationmRNAs were synthesized from the SP6 promoter using linearized plasmid DNA.Proteins were synthesized in rabbit reticulocyte lysate (RRL) according to themanufacturer’s instructions (Promega) in the presence of 35S-labelled methionineand cysteine (7.5 Ci per 10 l reaction) and in the absence or presence of RMs.Translation and membrane insertion of the TA protein RAMP4op and the invariantchain of MHC class II molecules were done as described previously (Favaloro et al.,2008), with the exception that increasing amounts of purified recombinant WRBccwere added as indicated in supplementary material Fig. S3.

This work was supported by a grant from the DeutscheForschungsgemeinschaft (SFB 638 A2). We thank Klaus Meese forexcellent technical assistance, Irmgard Sinning, Günes Bozkurt andMatthias Seedorf for critically reading the manuscript and helpfulsuggestions, and members of our group for stimulating discussions.The data included in this manuscript have never been either submittedfor publication or published elsewhere. The authors declare no conflictof interest.

Supplementary material available online athttp://jcs.biologists.org/cgi/content/full/124/8/1301/DC1

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