http://udock.fr

Who ?

Matthieu MontesCNAM GBA

Guillaume LevieuxCNAM CEDRIC

video

Why ?

How ?

Gamification

• Electrostatics

Gamification

• Shape

Gamification

• Grapnels and touch like interface

Gamification

• Realtime feedbacks

Gamification

• Enrich

Then ?

Player behavior modeling

• Online log of every in game action• Online log of best poses• Offline analysis to :

– Find interesting solutions from naive users– Find new heuristics for docking algorithms– Feed the design process

Quick and dirty prototypingProtein coordinate file (PDB)

Chimera DockPrep

Deleting watersRepairing side‐chainsAdding hydrogensAssigning partial chargesWriting in mol2 format

Protein coordinate file (mol2)

Udock loaderGeneration of the 3D meshGeneration of the SESColoration of the SES

Protein 3D object

Bullet Generation of the collision mesh

Interactive Protein object

Protein coordinate file (PDB)

Teaching

Validation

Further work

• Gamification process• Offline version for researchers• Multiple vizualisation methods

Thanks !

Questions ?