The End of Simulation? Mike Payne. If we are honest about the usefulness of simulations they should...
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Transcript of The End of Simulation? Mike Payne. If we are honest about the usefulness of simulations they should...
The End of Simulation?
Mike Payne
If we are honest about the usefulness of simulations they should be:
Genuinely predictive
Free of adjustable parameters
Computationally tractable and affordable
..... and if you want lots of people to use them then running the simulations should be as simple as possible – ideally nothing beyond specifying the system.
ONETEPLinear scaling quantum mechanical calculations
Peter Haynes
Arash Mostofi
Imperial College, London
Chris Kriton Skylaris
University of Southampton
0
10
20
30
40
50
60
0 500 1000 1500 2000 2500
Number of atoms
To
tal t
ime
(h)ONETEP
CASTEP
Total energy calculations with ONETEP on pieces of DNA. The total time taken by each DNA piece is plotted as a function of the number of atoms. Also shown are times for calculations of equivalent quality with CASTEP.
Application to DNA
£20
Hierarchies of atomistic modelling
Atoms 1 10 100 1000 1,000,000Time 0 0 ps ns s
0
0.0001 eV
qualitative
topological
0.01 eV
Tight binding
empirical
DFT
QMCCI
Accuracy
DFT
Empirical atomistic
Continuum
Multiscale Modelling Schemes
Correlated QM
Scheme to couple continuum simulations to empirical simulations developed by Peter Gumbsch and co-workers in 1991.
Many similar examples: electrostatics, solvation,...
What about coupling DFT (or cheap QM) atomistic and empirical atomistic simulations.?
Many so-called QM/MM schemes - few of them suitable for dynamicalyl evolving systems – let alone being parameter-free, predictive and usable.
“Learn on the fly” - Hybrid classical/quantum molecular dynamics simulation
Gábor Csányi
Engineering, Cambridge
Alessandro De Vita
King’s College, London
Learn on the Fly Scheme (LOTF)
Empirical Atomistic
Continuum
Atoms represented by empirical potentials with parameters fit to a quantum mechanical calculation
“Learn on the fly” Gábor Csányi
10
Learning the environment
Crack Propagation in Silicon
J.R. Kermode1, T. Albaret2, D. Sherman3, N. Bernstein4,P. Gumbsch5,6, MCP, G. Csányi7 & A. De Vita8,9
1. TCM Group, Cavendish Laboratory2. Université de Lyon 1, 3. Department of Materials Engineering, Technion–Israel Institute of
Technology, 4. Center for Computational Materials Science, NRL, 5. Institut für Zuverlässigkeit von Bauteilen und Systemen,
Universitat Karlsruhe 6. Fraunhofer–Institut für Werkstoffmechanik Freiburg7. Engineering Laboratory, University of Cambridge.8. Dept. of Physics, King’s College London, 9. INFM–DEMOCRITOS CENMAT, University of Trieste
Propagation of [1-10] (111) crack in silicon
Kermode et al., Nature 455, 1224 (2008)
This gives detailed description ofstress fields around the crack tip
Propagation of [1-10] (111) crack in silicon
Multiscalemodelling
BUT
Albert Bartok-Partay & Gabor Csanyi, Engineering, Cambridge
Imre Risi Kondor, Caltech
‘An art rather than a science’
Surface energies
• MEAM error ≈ 20-30%
Considerable recent progress by empirically correcting the limitations of DFT – DFT-D, LDA+U,....
What about when you do need properly correlated QM methods coupled to DFT simpler QM?
Simple in the case of, say CI, region within Hartree-Fock calculation.
Alternative approach – DMFT (Cedric Weber).
DFT
Empirical atomistic
Continuum
Hybrid Modelling Schemes (QM/MM)
Correlated QM
BUT
Hierarchies of atomistic modelling
Atoms 1 10 100 1000 1,000,000Time 0 0 ps ns s
0
0.0001 eV
qualitative
topological
0.01 eV
Tight binding
empirical
DFT
QMCCI
Accuracy
But larger systems have longer timescales
Mark Buchanan, New Scientist, p42 Vol. 2157 magazine, 24 October 1998
The timescale problem
Some sampling based approaches:Simulated annealingRandom sampling – Needs and PickardGeneric algorithms – Nested sampling – Csanyi and Bartok-Partay
Mark Buchanan, New Scientist, p42 Vol. 2157 magazine, 24 October 1998
The ‘known unknowns’
The long timescales are usually associated with getting over energy barriers between minima.IF the end points are known then many techniques exist for finding the transition state and its energy or free energy: Nudged elastic band, LST, QST, Blue Moon, OPTIM - Wales
Mark Buchanan, New Scientist, p42 Vol. 2157 magazine, 24 October 1998
So the problem is the ‘unknown unknowns’
Speeding up dynamics:Parallelise time ie do multiple uncorrelated dynamical simulations (perfect for Exaflops computers) Hyperdynamics – VoterMetadynamics – Parrinello
Mark Buchanan, New Scientist, p42 Vol. 2157 magazine, 24 October 1998
The efficient solution to the unknown unknowns
Metadynamics with machine learningParrinello
So is everything in place to be able to perform predictive, parameter free simulations for any system – ie the end of simulation as an intellectual challenge ?Not quite – need to retain data for re-use.