Synthesis and Functionalization of Indoles Through Palladium-Catalyzed Reactions Sandro Cacchi* and...

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Synthesis and Functionalization of Indoles Through Palladium- Catalyzed Reactions Sandro Cacchi* and Giancarlo Fabrizi Dipartimento di Chimica e Technologie del Farmaco, Sapienza, Universita di Roma, P.le A. Moro 5, 00185 Roma, Italy Chem. Rev. 2011, 111, PR215–PR283 updated 2005, 105 (7), 2873-2920 Indole is the acronym from indigo (the natural dye) and oleum (used for the isolation) Indole ring is a structural component of a vast number of biologically active natural and synthetic compounds Classical Indole Syntheses: the Fischer indole synthesis the Gassman indole synthesis the Madelung synthesis the Bischler indole synthesis the Batcho-Leimgruber synthesis the Bartoli indole synthesis

Transcript of Synthesis and Functionalization of Indoles Through Palladium-Catalyzed Reactions Sandro Cacchi* and...

Page 1: Synthesis and Functionalization of Indoles Through Palladium-Catalyzed Reactions Sandro Cacchi* and Giancarlo Fabrizi Dipartimento di Chimica e Technologie.

Synthesis and Functionalization of Indoles Through Palladium-Catalyzed Reactions

Sandro Cacchi* and Giancarlo FabriziDipartimento di Chimica e Technologie del Farmaco, Sapienza, Universita di Roma, P.le A. Moro 5, 00185 Roma, ItalyChem. Rev. 2011, 111, PR215–PR283 updated 2005, 105 (7), 2873-2920

Indole is the acronym from indigo (the natural dye) and oleum (used for the isolation)

Indole ring is a structural component of a vast number of biologically active natural and synthetic compounds

Classical Indole Syntheses:

the Fischer indole synthesis

the Gassman indole synthesis

the Madelung synthesis

the Bischler indole synthesis

the Batcho-Leimgruber synthesis

the Bartoli indole synthesis

Page 3: Synthesis and Functionalization of Indoles Through Palladium-Catalyzed Reactions Sandro Cacchi* and Giancarlo Fabrizi Dipartimento di Chimica e Technologie.

Classical Indole Syntheses

the Fischer indole synthesis

the Gassman indole synthesis

the Madelung cyclization

the Bischler indole synthesis,

the Batcho-Leimgruber synthesis of indoles

the Bartoli indole synthesis

¡Palladium-catalyzed reactions have deeply influenced the

strategies of indole synthesis in the last 30 years¡

Page 4: Synthesis and Functionalization of Indoles Through Palladium-Catalyzed Reactions Sandro Cacchi* and Giancarlo Fabrizi Dipartimento di Chimica e Technologie.

El Premio Nobel de Química 2010 fue otorgado a los científicos Richard F. Heck (EE.UU.), Ei-ichi Negishi (Japón), y Akira Suzuki (Japón), por “las reacciones de acoplamiento cruzado catalizadas por paladio en síntesis orgánica”

Ei-ichi NegishiAkira SuzukiRichard F. Heck

“Palladium-catalyzed reactions are in fact strongly dependent on a number of factors such as the nature of stabilizing ligands (as well as their presence or absence), bases, additives, the combination of them, solvents, and temperature. All of these factors combine to afford a toolbox of tunable reaction conditions that make palladium chemistry so flexible and, to some extent, unpredictable, leaving room for an uninterrupted discovery of new, exciting chemistry despite the vast amount of studies developed so far”

Page 5: Synthesis and Functionalization of Indoles Through Palladium-Catalyzed Reactions Sandro Cacchi* and Giancarlo Fabrizi Dipartimento di Chimica e Technologie.

GENERAL STRATEGIES1. Construction of the pyrrole ring based on the utilization, as precursors, ofcompounds containing nitrogen nucleophiles and carbon-carbon triple bonds

1.1. Cyclization of Alkynes: disconnection a

N

R1

R2

R3

g

a

e

b

Synthesis and Functionalization of Indoles Through Palladium-Catalyzed Reactions

Page 6: Synthesis and Functionalization of Indoles Through Palladium-Catalyzed Reactions Sandro Cacchi* and Giancarlo Fabrizi Dipartimento di Chimica e Technologie.

1.1. Cyclization of Alkynes

N

R1

R2

R3

g

a

e

b

Page 7: Synthesis and Functionalization of Indoles Through Palladium-Catalyzed Reactions Sandro Cacchi* and Giancarlo Fabrizi Dipartimento di Chimica e Technologie.

1.2. Disconnection a + g

N

R1

R2

R3

g

a

e

b

N

NNH2

N N

NNH2

?

Page 8: Synthesis and Functionalization of Indoles Through Palladium-Catalyzed Reactions Sandro Cacchi* and Giancarlo Fabrizi Dipartimento di Chimica e Technologie.

1.3. Disconnection a + e + g

1.4.Disconnection a + b

N

R1

R2

R3

g

a

e

b

Page 9: Synthesis and Functionalization of Indoles Through Palladium-Catalyzed Reactions Sandro Cacchi* and Giancarlo Fabrizi Dipartimento di Chimica e Technologie.

1.5. Disconnection a + d

N

R1

R2

R3

ag

e

b

cd

Page 10: Synthesis and Functionalization of Indoles Through Palladium-Catalyzed Reactions Sandro Cacchi* and Giancarlo Fabrizi Dipartimento di Chimica e Technologie.

1.6. Disconnection a + e (SINTESIS DE LAROCK)

N

R1

R2

R3

ag

e

b

cd

Page 11: Synthesis and Functionalization of Indoles Through Palladium-Catalyzed Reactions Sandro Cacchi* and Giancarlo Fabrizi Dipartimento di Chimica e Technologie.

1.6. Disconnection a + e (SINTESIS DE LAROCK)

N

R1

R2

R3

ag

e

b

cd

Page 12: Synthesis and Functionalization of Indoles Through Palladium-Catalyzed Reactions Sandro Cacchi* and Giancarlo Fabrizi Dipartimento di Chimica e Technologie.

1.6. Disconnection a + e (SINTESIS DE LAROCK)

N

R1

R2

R3

ag

e

b

cd

1.7. Disconnection c

Page 13: Synthesis and Functionalization of Indoles Through Palladium-Catalyzed Reactions Sandro Cacchi* and Giancarlo Fabrizi Dipartimento di Chimica e Technologie.

1.8. Disconnection a + f

N

R1

R2

R3

ag

e

b

cd

R5

R2 = CH---- Nu

f

Page 14: Synthesis and Functionalization of Indoles Through Palladium-Catalyzed Reactions Sandro Cacchi* and Giancarlo Fabrizi Dipartimento di Chimica e Technologie.

N

R1

R2

R3

ag

e

b

cd

GENERAL STRATEGIES1. Construction of the pyrrole ring based on the utilization, as precursors, ofcompounds containing nitrogen nucleophiles and carbon-carbon triple bonds

Page 15: Synthesis and Functionalization of Indoles Through Palladium-Catalyzed Reactions Sandro Cacchi* and Giancarlo Fabrizi Dipartimento di Chimica e Technologie.

GENERAL STRATEGIES2. Construction of the pyrrole ring based on the utilization, as precursors, ofcompounds containing nitrogen nucleophiles and carbon-carbon double bonds

2.1. Disconnection e

Synthesis and Functionalization of Indoles Through Palladium-Catalyzed Reactions

N

R1

R2

R3

a

e

c

a + e

Page 16: Synthesis and Functionalization of Indoles Through Palladium-Catalyzed Reactions Sandro Cacchi* and Giancarlo Fabrizi Dipartimento di Chimica e Technologie.

2.1. Disconnection e

N

R1

R2

R3

a

e

c

a + e

Page 17: Synthesis and Functionalization of Indoles Through Palladium-Catalyzed Reactions Sandro Cacchi* and Giancarlo Fabrizi Dipartimento di Chimica e Technologie.

2.2. Disconnection a + e

N

R1

R2

R3

a

e

c

a + e

2.2. Disconnection a

Page 18: Synthesis and Functionalization of Indoles Through Palladium-Catalyzed Reactions Sandro Cacchi* and Giancarlo Fabrizi Dipartimento di Chimica e Technologie.

2.3. Disconnection a

2.4. Disconnection c + h

N

R1

R2

R3

a

e

c

a + e

R3 = CH2----Nu

h

Page 19: Synthesis and Functionalization of Indoles Through Palladium-Catalyzed Reactions Sandro Cacchi* and Giancarlo Fabrizi Dipartimento di Chimica e Technologie.

GENERAL STRATEGIES2. Construction of the pyrrole ring based on the utilization, as precursors, ofcompounds containing nitrogen nucleophiles and carbon-carbon double bonds

Synthesis and Functionalization of Indoles Through Palladium-Catalyzed Reactions

N

R1

R2

R3

a

e

c

a + e

R3 = CH2----Nu

h

Page 20: Synthesis and Functionalization of Indoles Through Palladium-Catalyzed Reactions Sandro Cacchi* and Giancarlo Fabrizi Dipartimento di Chimica e Technologie.

GENERAL STRATEGIES3. Construction of the pyrrole ring by C-N bond forming reactions (Buchwald /Hartwig methodologies)

Synthesis and Functionalization of Indoles Through Palladium-Catalyzed Reactions

N

R1

R2

R3

a

e

b

g

3.1. Disconnection g

Page 21: Synthesis and Functionalization of Indoles Through Palladium-Catalyzed Reactions Sandro Cacchi* and Giancarlo Fabrizi Dipartimento di Chimica e Technologie.

Synthesis and Functionalization of Indoles Through Palladium-Catalyzed Reactions

N

R1

R2

R3

a

e

b

g

3.1. Disconnection e + g

3.2. Disconnection a + g

Page 22: Synthesis and Functionalization of Indoles Through Palladium-Catalyzed Reactions Sandro Cacchi* and Giancarlo Fabrizi Dipartimento di Chimica e Technologie.

Synthesis and Functionalization of Indoles Through Palladium-Catalyzed Reactions

N

R1

R2

R3

a

e

b

g

3.3. Disconnection a + b

Page 23: Synthesis and Functionalization of Indoles Through Palladium-Catalyzed Reactions Sandro Cacchi* and Giancarlo Fabrizi Dipartimento di Chimica e Technologie.

Synthesis and Functionalization of Indoles Through Palladium-Catalyzed Reactions

N

R1

R2

R3

a

e

b

g

3.3. Disconnection a + e

Page 24: Synthesis and Functionalization of Indoles Through Palladium-Catalyzed Reactions Sandro Cacchi* and Giancarlo Fabrizi Dipartimento di Chimica e Technologie.

GENERAL STRATEGIES3. Construction of the pyrrole ring by C-N bond forming reactions

Synthesis and Functionalization of Indoles Through Palladium-Catalyzed Reactions

N

R1

R2

R3

a

e

b

g

Page 25: Synthesis and Functionalization of Indoles Through Palladium-Catalyzed Reactions Sandro Cacchi* and Giancarlo Fabrizi Dipartimento di Chimica e Technologie.

GENERAL STRATEGIES4. Functionalization of the preformed indole system

Synthesis and Functionalization of Indoles Through Palladium-Catalyzed Reactions

Page 26: Synthesis and Functionalization of Indoles Through Palladium-Catalyzed Reactions Sandro Cacchi* and Giancarlo Fabrizi Dipartimento di Chimica e Technologie.

GENERAL STRATEGIES4. Functionalization of the preformed indole system

Synthesis and Functionalization of Indoles Through Palladium-Catalyzed Reactions

Page 27: Synthesis and Functionalization of Indoles Through Palladium-Catalyzed Reactions Sandro Cacchi* and Giancarlo Fabrizi Dipartimento di Chimica e Technologie.

GENERAL STRATEGIES4. Functionalization of the preformed indole system

Synthesis and Functionalization of Indoles Through Palladium-Catalyzed Reactions

Page 28: Synthesis and Functionalization of Indoles Through Palladium-Catalyzed Reactions Sandro Cacchi* and Giancarlo Fabrizi Dipartimento di Chimica e Technologie.

GENERAL STRATEGIES4. Functionalization of the preformed indole system

Synthesis and Functionalization of Indoles Through Palladium-Catalyzed Reactions

Page 29: Synthesis and Functionalization of Indoles Through Palladium-Catalyzed Reactions Sandro Cacchi* and Giancarlo Fabrizi Dipartimento di Chimica e Technologie.

GENERAL STRATEGIES4. Functionalization of the preformed indole system

Synthesis and Functionalization of Indoles Through Palladium-Catalyzed Reactions

Page 30: Synthesis and Functionalization of Indoles Through Palladium-Catalyzed Reactions Sandro Cacchi* and Giancarlo Fabrizi Dipartimento di Chimica e Technologie.

GENERAL STRATEGIES4. Functionalization of the preformed indole system

Synthesis and Functionalization of Indoles Through Palladium-Catalyzed Reactions

Page 31: Synthesis and Functionalization of Indoles Through Palladium-Catalyzed Reactions Sandro Cacchi* and Giancarlo Fabrizi Dipartimento di Chimica e Technologie.

Classical Indole Syntheses

the Fischer indole synthesis

the Gassman indole synthesis

the Madelung cyclization

the Bischler indole synthesis,

the Batcho-Leimgruber synthesis of indoles

the Bartoli indole synthesis

¡Palladium-catalyzed reactions have deeply influenced the

strategies of indole synthesis in the last 30 years¡

Conclusion: “In general, it is apparent from a synthetic perspective that the application of palladiumbcatalysis to indole chemistry has had a considerable impact on the synthesis of this important class of compounds. It is used almost routinely in today’s preparation of a vast number of indoles, ranging from simple to complex molecular targets.”

Synthesis and Functionalization of Indoles Through Palladium-Catalyzed ReactionsSandro Cacchi* and Giancarlo FabriziDipartimento di Chimica e Technologie del Farmaco, Sapienza, Universita di Roma, P.le A. Moro 5, 00185 Roma, Italy

Chem. Rev. 2011, 111, PR215–PR28 updated 2005, 105 (7), 28732920