Survey of bacteria Heliobacteria Eurybacteria Sphingobacteria Spirochaetae Hadobacteria...

Survey of bacteria

Heliobacteria

Eurybacteria

Sphingobacteria

Spirochaetae

Hadobacteria

Proteobacteria

Cyanobacteria

Planctobacteria

Endobacteria

Euryarchaeota

Actinobacteria

Thaumarchaeota

Togobacteria

Nanoarchaeota

Composed byBas Kooijman

Korarchaeota

Crenarchaeota

http://www.bio.vu.nl/thb/deb/sheets/cycle_pr.htm

Lipobacteria

outer membrane present, usually with murein wall between the two membranes; outer membrane of phospholipids

acyl ester lipids; lipopolysaccaride absent

no flagellar shaft outside membrane

Spirochaeta (Spirochaetae)

From: Margulis, L & Schwartz, K.V.1998 Five kingdoms.Freeman, NY

Chloroflexus (Chlorobacteria Hadobacteria)


Deinococcus (Deinobacteria Hadobacteria)


One cell from a tetrad

Heliobacteria

Heliobacterium modesticaldum Heliorestis species

Glycobacteria

outer membrane present, usually with murein wall between the two

membranes; phospholipids in inner leaflet, lipopolysaccharides in

outer leaflet

acyl ester lipids

small recognition RNA (in Proteobacteria)

RuBisCo may be present

if present, flagella pass through outer membrane

Eurybacteria

Selenobacteria Selenomonas, Sporomusa

Fusobacteria Fusobacterium, Leptotrichia

Fibrobacteria Fibrobacter

Selenomonas palpitans from sheep rumen liquor

Planctomyces (Planctomycetales)


Gemmata (Planctomycetales)


Poribacteria

Fieseler,L, Horn, M., Wagner, M. and Hentschel1, U. (2004)Discovery of the Novel Candidate Phylum “Poribacteria” in Marine Sponges APPLIED AND ENVIRONMENTAL MICROBIOLOGY 70: 3724–3732

Bacterial types in the sponge Aplysina aerophoba1 Long rods with membrane-bound nuclear region and S-layer-type outer membrane, cell division by septation2 Short fat rods with membrane-bound nuclear region and electron-dense cytoplasm3 D-shaped cells with clear membrane-bound nuclear region and S-layer-type outer membrane4 Rods with clear membrane-bound nuclear region and gram-negative outer membrane5 Rods with clear, membrane-bound nuclear region and S-layer-type outer membrane6 Rods with membrane-bound compartment that is devoid of DNA; the compartment contains most of the RNA, while the DNA is restricted to the cytoplasm; the outer membrane contains budding appendages; there is an unusually wide periplasmic space and a phenotypic resemblance to G. aurantiaca

Anabaena (Phycobacteria Cyanobacteria)

From: Margulis, L & Schwartz, K.V.1998 Five kingdoms.Freeman, NYStaley, J. T. et al 1989 Bergey’s manual ofSystematic bacteriology. William & Wilkins, Baltimore

S external layer (slime or sheath)OM outer memebranePL peptidoglycan layerCM cytoplasmic membraneCW cell wallCY cytoplasmaE cell envelopeGV gas vesicle

N nucleoplasmic regionC carboxysomePP polyphosphate granuleCP cyanophycin granuleGG glycogen granulesTH thylakoidPB phycobilisome

Prochloron (Phycobacteria Cyanobacteria)


Pleurocapsa (Phycobacteria Cyanobacteria)

From: Staley, J. T. et al 1989 Bergey’s manual of Systematic bacteriology. William & Wilkins, Baltimore

Chamaesiphon (Gloeobacteria Cyanobacteria)


A bud enlargesB unequal fissionC forming reproductive pole, r

Nitrobacter (Proteobacteria)


Azotobacter (Proteobacteria)


Stigmatella (Proteobacteria)


Bdellovibrio (Proteobacteria)

From: Prescott, L.M. et al 1996 Microbiology. WCB, Dubuque

Caulobacter (Hyphomicrobia Proteobacteria)

From: Dworkin, M. 1985 Developmental biology of the bacteria.Benjamin/Cummings Publ. Co, ReadingMargulis, L & Schwartz, K.V.1998 Five kingdoms.Freeman, NY

Ancalomicrobium (Hyphomicrobia Proteobacteria)


Pedomicrobium (Hyphomicrobia Proteobacteria)


1 mother cell with hyphae and buds2 young bud3 mature bud with flagellum4 swarmer cell5 young mother cell attached to surface6 mature mother cell, beginning bud formation

Myxococcus (Thiobacteria Proteobacteria)

From: Dworkin, M. 1985 Developmental biology of the bacteria.Benjamin/Cummings Publ. Co, Reading

Leucothrix (Thiobacteria Proteobacteria)


Saprospira (Flavobacteria Sphingobacteria)


Chlorochromatium (Chlorobibacteria Sphingobacteria)


(= Chlorochromatium)

Posibacteria

(Gram-positive bacteria plus mycoplasmas, thermotogales)

single cytoplasmic membrane only, no outer membrane

large signal recognition RNA

acyl ester lipids; murein widespread

Streptomyces (Actinobacteria)

From: Dworkin, M. 1985 Developmental biology of the bacteria.Benjamin/Cummings Publ. Co, Reading

Bacillus (Endobacteria)

From: Margulis, L. & Schwartz, K.V. 1998 Five kingdoms.Freeman, NYPrescott, L.M. et al 1996 Microbiology. WCB, Dubuque

Mycoplasmas (Aphragmabacteria Endobacteria)


Thermogota (Togobacteria)


Archaebacteria

single cytoplasmic membrane only, no outer membrane

large signal recognition RNA

isoprenoid ether lipids; murein absent

presence of N-linked glycoprotein (as in eukaryotes and some other bacteria)

Nanoarchaeum equitans (Nanoarchaeota)

Found at 90°C in submarin ventsEpibiontic on Archaebacterium Ignicoccus, which grows anaerobically on S, H2, CO2

and produces H2SIntracellular membranes presentDiameter 400 m, genome size 0.5 Mbp

After: Huber, H., Hohn, M. J., Rschel, R. and others2002 A new phylum of Archaea represented by a nanosizedhyperthermophilic symbiomt, Nature 417: 63 - 67

Euryarchaeota


Archaeoglobi Halobacteria MethanobacteriaMethanococciMethanomicrobiaMethanopyri ThermococciThermoplasmata

Methanobacterium

Halobacteria sp. strain NRC-1each cell about 5 μm long.

http://en.wikipedia.org/wiki/Archaeoglobi

http://en.wikipedia.org/wiki/Halobacteria

http://en.wikipedia.org/wiki/Methanobacteria

http://en.wikipedia.org/wiki/Methanococci

http://en.wikipedia.org/wiki/Methanomicrobia

http://en.wikipedia.org/wiki/Methanopyri

http://en.wikipedia.org/wiki/Thermococci

http://en.wikipedia.org/wiki/Thermoplasmata

Thermoplasma (Thermoplasmata Euryarchaeota)


(Thaumarchaeota)Cenarchaeales Nitrosopumilales

http://en.wikipedia.org/wiki/Cenarchaeales

http://en.wikipedia.org/wiki/Nitrosopumilales

(Crearchaeota) AcidilobalesDesulfurococcalesSulfolobalesThermoproteales

Korarchaeum (Korarchaeota )

Korarchaeum cryptofilum

Survey of bacteria Heliobacteria Eurybacteria Sphingobacteria Spirochaetae Hadobacteria...

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