Structure and properties of virion Transmission and ... and epidemiology Clinical features ......
Transcript of Structure and properties of virion Transmission and ... and epidemiology Clinical features ......
Mosquito-borne viral infection
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Human Pathogen 2
Structure and properties of virionTransmission and epidemiologyClinical features Laboratory diagnosis Treatment & control
Poonsook Keelapang, Ph.D.Department of Microbiology, Faculty of Medicine,Chiang Mai University
• Viruses that maintained in nature through biological transmission between susceptible vertebrate hosts by hemotophagous arthropods (mosquito, tick, sandfly) or through transovarian and possible sexual transmission in arthropods
• Viruses multiply and produce viremia in vertebrates, multiply in the tissues of arthropods and are passed on to new vertebrate by the bites of arthropods after a period of extrinsic incubation.
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Arthropod-borne viruses (Arboviruses)
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1. Plague2. Smallpox3. Crimean ‐ Congo hemorrhagic fever4. West Nile Fever5. Yellow fever6. Lassa fever7. Nipah virus disease8. Marburg virus disease9. Ebola virus disease10. Handra virus disease11. Severe Acute Respiratory Syndrome 12. Middle East Respiratory Syndrome
ประกาศกระทรวงสาธารณสขุโรคตดิตอ่อนัตราย พ.ศ. ๒๕๕๙๓ มถิุนายน ๒๕๕๙
Family Flaviviridae (Flavus = yellow)
• Enveloped, spherical RNA virus (50-60 nm in diameter)
• Linear positive-sense ssRNA genome• Genus Flavivirus (53 species)
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EM: Dengue virus100 nm
3 structural proteins: Capsid (C), premembrane (prM/M) and envelope (E) (receptor binding, fusion, induce neutralizing Ab, hemagglutinating activity (goose RBCs)
7 nonstructural proteins: NS1, NS2a, NS2b, NS3, NS4a, NS4b, NS5
Replicate in cytoplasm, bud into ER
C prM E NS1 NS3 NS5NS2A NS2B NS4A NS4B
3’UTR5’UTRStructural proteins Nonstructural proteins
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Yellow fever virus Dengue virus
Murray Valley encephalitis virus
St. Louis encephalitis virus Japanese encephalitis virus
West Nile virus
Jawetz, Melnick, & Adelberg’s Medical Microbiology 27th Edition
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Major geographicdistribution
Primary vector
Reservoir Disease
Yellow fever virus Africa, South America
Aedes (Human, Monkey)
Hepatic necrosis,hemorrhage
Dengue virus Tropical and subtropical regions
Aedes (Human, Monkey)
Hemorrhagic fever
Zika virus Africa, Asia, South America
Aedes (Human, Monkey)
Fever+ rash
Japanese encephalitis virus
East and SoutheastAsia
Culex Bird, pig Encephalitis
West Nile virus Africa, Eastern Europe, Middle East, Asia, North America
Culex Bird Encephalitis
Murray Valley encephalitis virus
Australia Culex Bird Encephalitis
St. Louis encephalitis virus
America Culex Bird Encephalitis
Louping ill Britain Tick Sheep Meningitis Powassan Canada Tick Rodent EncephalitisRussian spring-summer encephalitis
Central Europe, USSR
Tick Rodent, bird Encephalitis
Yellow Fever Virus (YFV)• Mainly found in tropical Africa, south America, Caribbean • WHO estimates about 200,000 cases occur annually
• One antigenic type
Aedes africanus Aedes aegypti
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2015-2016AngolaCongo
Haemagogus ssp
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Outcome of YFV infection: Asymptomatic or a mild undifferentiated febrile illness: Classic yellow fever (incubation 3-6 days): sudden onset of fever,
headache, chills, generalized myalgia, nausea, vomiting
Severe cases (15-20%): fever, liver damage (jaundice), renal damage (oliguria, proteinuria), coagulation defects (nosebleed, bleeding gum, black vomit), hypotension seizures, coma, shock, and death.
Case mortality rate: 20-50%https://brianaltonenmph.files.wordpress.com/2013/02/12cb1852-ca52-a385-4df510507aee6c19_whitesofeyesturnyellow.jpg
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Prevention:Live-attenuated yellow fever vaccine YF-17D provides protection for >10 years; used for persons living in or traveling to endemic areas
Contraindications: • Allergy to a vaccine component • Age <6 months (8 months)• Immunocompromised (HIV with low
CD4 T cells, thymus disorder, abnormal immune function, malignant, transplantation, immunosuppressive)
(Age >60 years, pregnancy, breastfeeding)
Dengue virus (DENV)• 4 serotypes: DENV-1,-2,-3,-4 (40% difference)• Tropical and sub-tropical regions
2013: 390 millions infections/year; 96 millions casesThailand: 6-29% per year
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Guzman MG et al. 2014
DENV in Thailand
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Daytime biting, Breeds in clean water in household container
Aedes aegypti Aedes albopictus
Transmission • Sylvatic cycle (mosquito ↔ monkey)• Urban cycle (mosquito ↔ human)
• Female mosquito takes up DENV in infected blood meals midgut ovaries, brain and fat body salivary glands (~5-10 days) chronic infection (vertical/sexual transmission)
Viremia in human ~ 4-5 days (fever phase)
Vectors : Aedes ssp.
.
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DENV infection in human skin: immature dendritic cells, Langerhans cells lymphoid organs, blood: monocytes, macrophages,
B lymphocytes liver, spleen, kidney, lung, bone marrow, thymus, brain etc.Immune response• Primary infection (first serotype): CMI, HMI
• Serotype – specific : prolonged • Cross – reactive : short - term (3 - 9 months)
• Secondary infection - tend to be more severe ? Antibody-dependent enhancement ? Original antigenic sin
Fc-bearing monocytes or macrophages
• Severity: age (children), gender (female), nutrition (well-nourished), race (Asian, Caucasian), genetics, virus strain
Dengue Classification
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1. Severe plasma leakage2. Severe hemorrhage3. Severe organ impairment
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with warning signs
Dengue + Warning signs
without
Severe Dengue
Probable dengueLive in/travel to dengue endemic area. Fever and 2 of the following criteria:• Nausea, vomiting• Rash• Muscle & bone pains• Tourniquet test positive• Leukopenia• Any warning signs
Warning signs• Abdominal pain or
tenderness• Persistent vomiting• Clinical fluid accumulation• Mucosal bleed• Lethargy, restlessness• Liver enlargement > 2cm• Hematocrit• Platelet count
Laboratory-confirmed dengue
DENGUE GUIDELINES FOR DIAGNOSIS,TREATMENT, PREVENTION AND CONTROL (WHO,2009)
Severe plasma leakage• Shock (DSS)• Fluid accumulation with respiratory distressSevere bleedingSevere organ involvement• Liver: AST or ALT > 1,000 IU/ml
• CNS: impaired consciousness
• Heart and other organs
Outcomes of DENV infection Asymptomatic (majority) Symptomatic (incubation 4-7 days)• Undifferentiated fever
Fever without specific symptoms• Dengue fever (DF)
Fever with +2 of the following: headache, retro-orbital pain, arthralgia/bone pain, myalgia, rash, hemorrhagic manifestations, leukopenia
• Dengue hemorrhagic fever (DHF) without/with shock (DSS)Fever, hemorrhagic manifestations, thrombocytopenia, plasma leakage
• Expanded dengue syndrome/isolated organopathy(unusual manifestations e.g. hepatic and brain dysfunction)
http://naturalunseenhazards.files.wordpress.com/2010/07/dengue-shoulder.jpg
15Comprehensive Guidelines for Prevention and Control of Dengue and Dengue Haemorrhagic Fever (WHO, 2011)
Hepatomegaly Increased vascular permeability
Hemorrhagic manifestations:(+) tourniquet
petechiae
FeverAnorexiaVomiting
Dehydration
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Thrombocytopenia
Leakage of plasmaHemoconcentration
HypoproteinmiaPleural effusion/ascites
Coagulopathy
Major manifestations/Pathophysiological changes of DHF
DHFSeverityGrade
I
II
III
IV
Hypovolemia
Shock
Death
Disseminated intravascular clot (DIC)
Severe bleeding(GI, brain, etc)
DFDHF/DSS
Nimmanitya, 1978Comprehensive Guidelines for Prevention and Control of Dengue and Dengue Haemorrhagic Fever (WHO, 2011)
Spontaneous bleeding
Circulatory failure – weak pulse, narrow pulse pressure, hypotension, restlessness
Profound shock –undetectable BP and pulse
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http://www.cdc.gov/dengue/training/cme/ccm/images/tourniquet_test1.png
>10 จุด ตอ่ตารางนิ้ว
Inflate the cuff to a pressure exactly halfway between systolic and diastolic pressures for 5 minutes
Tourniquet test
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Phases of infection: DHFFebrile2-7 days
Convalescent2-4 days
Critical 24-48 hours
No aspirin
↑> 20%
< 100,000/mm3
Plasma leak to pleural or peritoneal spaces Improve appetite and
sense of well being
Intravascular fluid therapy
Comprehensive Guidelines for Prevention and Control of Dengue and Dengue Haemorrhagic Fever (WHO, 2011)
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Diagnosis of dengue virus infection
1° infection 2° infection
IgG
IgM cut-off
IgG cut-off1:2560 HI
tite
r
IgM IgM
Onset of symptoms
viremia
Virus isolation
RNA, NS1
• Virus isolation (1-2 wks)Toxorhychites mosquito (intrathoracic), Mosquito cell lines (C6/36, AP-61), mammalian cell lines (Vero, BHK-21)
• Detection of viral genomeRT-PCR (1-2 days)
• Detection of viral antigen NS1 Ag (immunochromatographic test, ELISA) (15 min -3 hr)
Detection of antibody (2 sera – acute, convalescent) -IgM/IgG rapid test • Increased IgM titer (IgM detectable from d5-21 and persist for 2-3 months) • >4-fold rising IgG titer (HI, ELISA, NT) (IgG detectable from d6-30; 1°type-
specific, 2°cross-reactive)• IgM/IgG: 1°> 1.2 ; 2°< 1.2
viremia
Virus isolation
RNA, NS1
NS1antigen appears as early as day 1 after the onset of the fever and declines to undetectable levels by5–6 days
Dengvaxia® (CYD-TDV)(First approved human vaccine: Mexico, Brazil, Philippines, Thailand)
Clinical efficacy and safety of a novel tetravalent dengue vaccine in healthy children in Asia: a phase 3, randomised, observer-masked, placebo-controlled trial Capeding et al., Lancet 2014; 384:1358-65 22
live recombinant tetravalent dengue vaccine
prME YF17D
0/6/12 month schedule
For use in individuals 9-45 years of age living in endemic areas
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Zika virus 1947 : First isolated from a sentinel monkey in Zika forest in Uganda 1954 : First report case in human in Nigeria
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Adapted from https://wwwnc.cdc.gov/travel/files/zika-areas-of-risk.pdf
11947 First documented in monkey in Uganda
1954 First human case in Nigeria
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2007 Outbreak in Yap185 cases
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2013Outbreak in French polynesia8510 cases
5 2014Outbreak in New Caledonia114 cases
62014-2016Outbreak in Central and South Americaestimated > 1.5 million cases
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Zika virus: 1 serotype, 2 lineages (African and Asian)Transmission:
Vector : Aedes ssp. (Ae. aegypti, Ae. albopictus, Ae. Africanus, etc.) Sexual transmission : semen, female genital tract (Penot et al., 2016, Moreira
et al. 2016) Platelet transfusion (Motta et al., 2016)Perinatal transmission (Besnard et al., 2014)
http://www.vox.com/2016/1/20/10795562/zika-virus-cdc-mosquitoes-birth-defects
Consequent of Zika virus infection• Asymptomatic : 80%• Symptomatic
– Incubation period: not clear (4-7 days?)– Symptoms: fever, skin rash, conjunctivitis, muscle and joint pain,
malaise and headache; usually mild and last for 2-7 days– Complications:
• Guillain-Barré syndrome• Zika virus infection during pregnancy may cause congenital brain
abnormalities such as microcephaly, metal retardation, and visual and auditory impairment; greatest risk if mother is infected during the first trimester
26https://static01.nyt.com/images/2016/07/23/nyregion/23ZIKA2/23ZIKA2-master675.jpg
https://med.stanford.edu/news/all-news/2016/09/how-zika-affects-cranial-precursor-cells/_jcr_content/main/image.img.620.high.jpg
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No specific treatmentNo vaccinePrevention• Protection against mosquito bites• For regions with no active transmission of Zika virus,
WHO recommends practising safer sex or abstinence for a period of 6 months for men and women who are returning from areas of active transmission
Diagnosis• RT-PCR (serum, plasma, urine*, saliva, CSF)• Zika-specific IgM , PRNT – difficult to interpret in endemic areas and
in travellers with a previous history of flavivirus infection or vaccination against flavivirus
Japanese Encephalitis Virus (JEV)
• First recognized in Japan (1871) • South Asia, Southeast Asia,
East Asia and the Western Pacific
• 67,900 cases/year• 15,000 human deaths/year
• Temperate area : epidemic, summer
• Tropical area : sporadic, rainy season,
• Children (<15 years) are principally affected
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JEV: 1 serotype, 5 genotypes
Vector: Culex tritaeniorhynchus, Cx. gelidus, Cx. vishnui, Cx. Annulus, Cx. pseudovishnui, Cx. fuscocephalus
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- Bite at night time- Breed in rice fields, irrigation canals and water pools
filled with stagnant water
Dead end (incidental) hosts: human, horse
Natural cycle
• JE virus is maintained in a cycle involving mosquitoes and vertebrate hosts, mainly pigs and wading birds
Amplifying hosts/Reservior: pig, birds (egrets & herons)
Clinical spectrum of JEV infection in human
• Asymptomatic:symptomatic = 25-1000:1
• Incubation period : 5 to 15 days1. Prodrome : sudden onset of severe headache, high fever,
nausea, vomiting2. Encephalitis stage: altered sensorium, convulsion, neck
stiffness, muscular rigidity, mask-like facies, acute flaccid weakness, movement disorder; Case fatality rate : 8.5-72%
3. Late stage: recovery or persistence of neurologic, cognitive, or psychiatric sequelae (45-75% of survivors)
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Anterior horn cells of spinal cord
Thalamus
Midbrain
Basal ganglia
Cerebral cortex
Cerebellum
31U.K. Misra, J. Kalita / Progress in Neurobiology 91 (2010) 108–120
severe neck (retrocollis-คอแอน่ไปดา้นหลงั) upper limb dystonia (กลา้มเนื้อแข็งเกร็งผดิรูป)severe wasting of both
the legs
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Laboratory:• RT-PCR (CSF) • CSF : Anti-JE IgM > 40 IU/ml• Serum: Anti-JE IgM > 40 IU/ml
JE IgM:dengue IgM ratio > 1
Clinical: fever + conscious change
Diagnosis
Treatment : no specific antiviral drug
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Personal protective measures to prevent mosquito bites
Human vaccine
- Killed, bivalent vaccine (Beijing-1 & Nakayama): prepared in mouse brain, 3 doses with 91% protection
- Inactivated Vero cell culture-derived JE vaccine (IXIARO)
- Live-attenuated, monovalent vaccine (SA14-14-2): propagated in primary hamster kidney cells; > 95% protection
- Live-attenuated, chimeric JEV/YFV vaccine (IMOJEV): propagated in Vero cells ; 95% protection
Prevention and control
Outbreak of West Nile Virus in the US.
34http://wwwnc.cdc.gov/eid/images/05-0289a-F1.gif
New York
West Nile Virus (first detected in Uganda 1937)(Middle East, Australia, Africa, Europe, America)
• Vector: Culex ssp. Reservoir: Bird
• Incidental hosts: human, horse
• Asymptomatic: 80%
• West Nile fever: fever, vomiting, skin rash with swollen lymph glands
• West Nile encephalitis (1 in 150): high fever, neck stiffness, disorientation, coma, tremors, convulsions, muscle weakness and paralysis. High risk: elderly (> 50 years) and immunocompromised persons (mortality rate: 3-15%)
• IgM antibody-capture ELISA (CSF, serum), no vaccine35
Family Togaviridae (toga=cloak)2 Genera: Alphavirus, Rubivirus
• E1 spikes act as attachment proteins, induce neutralizing activity and possess hemagglutinating activity
• Replicates in cytoplasm
E1(59 kDa)
E2C
• An enveloped, icosahedral RNA virus (70 nm in diameter) with a linear single-stranded, positive-sense RNA (11.8 kb)
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Major geographicdistribution
Primary vector
Reservoir Disease
Eastern Equine Encephalitis virus
North America Culex,Anopheles
Birds Encephalitis (mortality rate 30‐70%)
Western Equine Encephalitis virus
North America Culex,Anopheles
Reptile,(Bird?)
Encephalitis(mortality rate 3‐7%)
Venezuelan Equine Encephalitis virus
Central and SouthAmerica
Culex,Anopheles
Rodents Encephalitis
Chikungunya virus Africa, Asia Aedes Human Fever + rash + arthralgia
Onyong‐nong virus Africa Anopheles ? Fever + rash + arthralgia
Ross River virus Australia Culexannulirostris
Kangaroo, wallabies
Fever + rash + arthralgia
Mayaro virus South America Haemagogous Monkeys Febrile illness
Alphaviruses
Chikungunya virus (G. Alphavirus)(Makonde )= that which bends up
• First isolated in 1952 from the serum of a febrile patient during a dengue epidemic in Tanzania (Lumsden, 1955).
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3 genotypes: West African, Asian, East-Central-South African
Weaver et al., N Engl J Med 2015;372:1231-9.
Transmission - mainly through mosquito bites
Viremia persistsfor upto 5 days (up to 109 copies/ml)
Madariaga et al., Braz J Infect Dis 2016;20:91-8.
Extrinsic incubation period:7- 10 days
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Others: rodent, birdPrimary reservoir: human
40Couderc T & Lecuit M. Antiviral Research 2015;121:120–131.
Pathogenesis
Outcome of chikungunya virus infection• Asymptomatic infection: 3-25%• Incubation: 2-4 days (range 1-12 days)• High fever (>39°C), arthralgia (joint pain), headache, rash,
back pain, myalgia, nausea, vomiting and photophobia
• Migratory polyalthalgia, bilateral and symmetric. Most commonly in hands and feet joints. Joint swelling.
WHO SEAROBurt et al., Lancet 2012; 379: 662–71
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Infant (intrapartum transmission): neurologic disease, hemorrhagic symptoms, and myocardial disease
50-60% persistent joint pains for months or years
Case fatality rate = 1:1000
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Schwartz O & Albert ML. Nature Reviews Microbiology 2010; 8: 491-499.
Diagnosis• Virus isolation: < 3 days• Genome detection (RT-PCR): < 8 days• Anti-CHIKV IgM: > 5 days, peak at weeks 3 - 5 after the onset of
illness and persist for about 2 months• Anti-CHIKV IgG: (paired sera) 4 fold rising titer by HI or ELISA no specific treatment no vaccine
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Bunyaviruses
• Enveloped RNA virus (Ø 100-120 nm)
• Tripartite, linear negative-sense ssRNA genome
Major geographicdistribution
Primary vector
Reservoir Disease
California encephalitis virus
North America Aedesmelanimon
Rodent Encephalitis
Bunyamwera Africa Aedes Rodent, rabbit Febrile illness
La Crosse America (Midwestern states)
Aedestriseriatis
Rodent Encephalitis(Mortality rate 1%)
Rift Valley fever Africa Aedes Sheep, Cattle Hemorrhagic fever (Mortality rate 50%)
Crimean ‐ Congo hemorrhagic fever Africa, Asia , Europe Tick
Recommended readings
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