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Blad1MG-RAST gene predictions for sample AT5, based on the SWISSPROT database. MG-RAST ID 4702457.3EntryGene namesProtein namesPathwayTaxonomic lineage IDs (SUPERKINGDOM)Taxonomic lineage IDs (KINGDOM)Gene ontology IDsQ6D2L3mqo ECA3082Probable malate:quinone oxidoreductase (EC 1.1.5.4) (MQO) (Malate dehydrogenase [quinone])PATHWAY: Carbohydrate metabolism; tricarboxylic acid cycle; oxaloacetate from (S)-malate (quinone route): step 1/1. {ECO:0000255|HAMAP-Rule:MF_00212}.2GO:0052589; GO:0008924; GO:0006099Q81BT0BC_3066UPF0271 protein BC_30662GO:0005975; GO:0003824B9LER8gatA Chy400_1855Glutamyl-tRNA(Gln) amidotransferase subunit A (Glu-ADT subunit A) (EC 6.3.5.7)2GO:0005524; GO:0050567; GO:0006412B1HZM7rpmG Bsph_443550S ribosomal protein L332GO:0005840; GO:0003735; GO:0006412Q56894flgCFlagellar basal-body rod protein FlgC2GO:0030694; GO:0071973C6DHQ1trmA PC1_0191tRNA/tmRNA (uracil-C(5))-methyltransferase (EC 2.1.1.-) (EC 2.1.1.35) (tRNA (uracil(54)-C(5))-methyltransferase) (tRNA(m5U54)-methyltransferase) (RUMT) (tmRNA (uracil(341)-C(5))-methyltransferase)2GO:0030697C6DAJ1bamA yaeT PC1_0949Outer membrane protein assembly factor BamA2GO:0043165; GO:0009279; GO:0016021; GO:0051205P33627TUBA6 TUA6Tubulin alpha-6 chain (Alpha-6-tubulin)275933090GO:0005525; GO:0003924; GO:0005737; GO:0005874; GO:0007017; GO:0005200A8GDA7kdsA Spro_19942-dehydro-3-deoxyphosphooctonate aldolase (EC 2.5.1.55) (3-deoxy-D-manno-octulosonic acid 8-phosphate synthase) (KDO-8-phosphate synthase) (KDO 8-P synthase) (KDOPS) (Phospho-2-dehydro-3-deoxyoctonate aldolase)PATHWAY: Carbohydrate biosynthesis; 3-deoxy-D-manno-octulosonate biosynthesis; 3-deoxy-D-manno-octulosonate from D-ribulose 5-phosphate: step 2/3. {ECO:0000255|HAMAP-Rule:MF_00056}.; PATHWAY: Bacterial outer membrane biogenesis; lipopolysaccharide biosynthesis. {ECO:0000255|HAMAP-Rule:MF_00056}.2GO:0008676; GO:0005737; GO:0019294Q2NS78SG1722UPF0756 membrane protein SG17222GO:0005887B8H8Y9rsmG Achl_3932Ribosomal RNA small subunit methyltransferase G (EC 2.1.1.-) (16S rRNA 7-methylguanosine methyltransferase) (16S rRNA m7G methyltransferase)2GO:0005737; GO:0070043P48866COX1Cytochrome c oxidase subunit 1 (EC 1.9.3.1) (Cytochrome c oxidase polypeptide I)PATHWAY: Energy metabolism; oxidative phosphorylation.2759GO:0009060; GO:0005507; GO:0004129; GO:0022900; GO:0020037; GO:0016021; GO:0005506; GO:0005743; GO:0006119; GO:0005886; GO:0070469P32816gldA gldGlycerol dehydrogenase (GDH) (GLDH) (GlyDH) (EC 1.1.1.6)PATHWAY: Polyol metabolism; glycerol fermentation; glycerone phosphate from glycerol (oxidative route): step 1/2.2GO:0019588; GO:0008888; GO:0046872P07021yfiB b2605 JW2586Putative lipoprotein YfiB2GO:0009279; GO:0016021; GO:0005886O22256PME20 ARATH20 At2g47550 T30B22.15Probable pectinesterase/pectinesterase inhibitor 20 [Includes: Pectinesterase inhibitor 20 (Pectin methylesterase inhibitor 20); Pectinesterase 20 (PE 20) (EC 3.1.1.11) (Pectin methylesterase 20) (AtPME20)]PATHWAY: Glycan metabolism; pectin degradation; 2-dehydro-3-deoxy-D-gluconate from pectin: step 1/5.275933090GO:0045330; GO:0005618; GO:0042545; GO:0004857; GO:0005576; GO:0045490; GO:0030599P76460atoE b2223 JW2217Short-chain fatty acids transporter2GO:0016021; GO:0005886; GO:0006810C6DHY3lolB PC1_2116Outer-membrane lipoprotein LolB2GO:0009279; GO:0008565Q31YR1cbpA SBO_2231Curved DNA-binding protein2GO:0003681; GO:0005737; GO:0009295; GO:0006457Q38YY6LCA_0289Probable phosphoketolase (EC 4.1.2.-)2GO:0016832; GO:0005975P94364cydA yxkK BSU38760Cytochrome bd ubiquinol oxidase subunit 1 (EC 1.10.3.-) (Cytochrome d ubiquinol oxidase subunit I)2GO:0019646; GO:0070069; GO:0009055; GO:0016021; GO:0046872; GO:0016682; GO:0005886P24465CYP71A1Cytochrome P450 71A1 (EC 1.14.-.-) (ARP-2) (CYPLXXIA1)275933090GO:0005789; GO:0009835; GO:0020037; GO:0016021; GO:0005506; GO:0004497; GO:0016705A8GI41nadK Spro_3685NAD kinase (EC 2.7.1.23) (ATP-dependent NAD kinase)2GO:0005524; GO:0019674; GO:0003951; GO:0006741; GO:0005737; GO:0046872P14853COX3 COXIII GlmaxMp04Cytochrome c oxidase subunit 3 (EC 1.9.3.1) (Cytochrome c oxidase polypeptide III)275933090GO:0019646; GO:0004129; GO:0016021; GO:0005743P03009Probable transposase for transposon Tn9032GO:0003677; GO:0006310; GO:0032196Q819I5ppk BC_3993Polyphosphate kinase (EC 2.7.4.1) (ATP-polyphosphate phosphotransferase) (Polyphosphoric acid kinase)2GO:0005524; GO:0006799; GO:0008976; GO:0009358A4IM25ileS GTNG_1001Isoleucine--tRNA ligase (EC 6.1.1.5) (Isoleucyl-tRNA synthetase) (IleRS)2GO:0005524; GO:0002161; GO:0005737; GO:0004822; GO:0006428; GO:0008270O86963glpOAlpha-glycerophosphate oxidase (EC 1.1.3.21) (Glycerol-3-phosphate oxidase)PATHWAY: Membrane lipid metabolism; glycerophospholipid metabolism.2GO:0006071; GO:0004368; GO:0009331; GO:0006072; GO:0004369; GO:0006650Q6D8J0mutH ECA0984DNA mismatch repair protein MutH (Methyl-directed mismatch repair protein)2GO:0003677; GO:0006304; GO:0005737; GO:0004519; GO:0006298B8I3S9fhs Ccel_0018Formate--tetrahydrofolate ligase (EC 6.3.4.3) (Formyltetrahydrofolate synthetase) (FHS) (FTHFS)PATHWAY: One-carbon metabolism; tetrahydrofolate interconversion. {ECO:0000255|HAMAP-Rule:MF_01543}.2GO:0005524; GO:0009396; GO:0004329; GO:0035999A1JR39YE2953UPF0271 protein YE29532GO:0005975; GO:0003824A5CQ48prfA CMM_1157Peptide chain release factor 1 (RF-1)2GO:0005737; GO:0016149Q9SSQ9PLDALPHA2 PLD2 At1g52570 F6D8.21Phospholipase D alpha 2 (AtPLDalpha2) (PLD alpha 2) (EC 3.1.4.4) (Choline phosphatase 2) (Phosphatidylcholine-hydrolyzing phospholipase D 2)275933090GO:0070290; GO:0009738; GO:0005509; GO:0009941; GO:0030136; GO:0009873; GO:0016042; GO:0016020; GO:0046470; GO:0004630; GO:0005773Q9ZV25PLL4 At2g28890 F8N16.18Probable protein phosphatase 2C 23 (AtPP2C23) (EC 3.1.3.16) (Protein POLTERGEIST-LIKE 4) (Protein phosphatase 2C PLL4) (PP2C PLL4)275933090GO:0048366; GO:0046872; GO:0005634; GO:0005886; GO:0004722Q07942anfHNitrogenase iron protein 2 (EC 1.18.6.1) (Nitrogenase Fe protein 2) (Nitrogenase component II) (Nitrogenase reductase)2GO:0051539; GO:0005524; GO:0018697; GO:0046872; GO:0016612; GO:0009399; GO:0016163B7NMA6yohJ ECIAI39_2280UPF0299 membrane protein YohJ2GO:0016021; GO:0005886P63229gmhB Z0212 ECs0202D-glycero-beta-D-manno-heptose-1,7-bisphosphate 7-phosphatase (EC 3.1.3.82) (D,D-heptose 1,7-bisphosphate phosphatase) (HBP phosphatase)PATHWAY: Nucleotide-sugar biosynthesis; ADP-L-glycero-beta-D-manno-heptose biosynthesis; ADP-L-glycero-beta-D-manno-heptose from D-glycero-beta-D-manno-heptose 7-phosphate: step 2/4.; PATHWAY: Bacterial outer membrane biogenesis; LPS core biosynthesis.2GO:0097171; GO:0034200; GO:0005737; GO:0016311; GO:0009244; GO:0000287; GO:0008270Q1JFE4serS MGAS10270_Spy1550Serine--tRNA ligase (EC 6.1.1.11) (Seryl-tRNA synthetase) (SerRS) (Seryl-tRNA(Ser/Sec) synthetase)PATHWAY: Aminoacyl-tRNA biosynthesis; selenocysteinyl-tRNA(Sec) biosynthesis; L-seryl-tRNA(Sec) from L-serine and tRNA(Sec): step 1/1. {ECO:0000255|HAMAP-Rule:MF_00176}.2GO:0005524; GO:0005737; GO:0016260; GO:0097056; GO:0004828; GO:0006434B1HT97gpsA Bsph_1921Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94) (NAD(P)H-dependent glycerol-3-phosphate dehydrogenase)PATHWAY: Membrane lipid metabolism; glycerophospholipid metabolism. {ECO:0000255|HAMAP-Rule:MF_00394}.2GO:0051287; GO:0005975; GO:0046167; GO:0046168; GO:0047952; GO:0004367; GO:0036439; GO:0009331; GO:0006650; GO:0008654C6DC42sfsA PC1_3113Sugar fermentation stimulation protein homolog2Q834V4obg EF_1527GTPase Obg (EC 3.6.5.-) (GTP-binding protein Obg)2GO:0005525; GO:0003924; GO:0005737; GO:0000287; GO:0042254C6DI79argH PC1_4058Argininosuccinate lyase (ASAL) (EC 4.3.2.1) (Arginosuccinase)PATHWAY: Amino-acid biosynthesis; L-arginine biosynthesis; L-arginine from L-ornithine and carbamoyl phosphate: step 3/3. {ECO:0000255|HAMAP-Rule:MF_00006}.2GO:0042450; GO:0004056; GO:0005737P07642araCArabinose operon regulatory protein2GO:0019568; GO:0005737; GO:0043565; GO:0003700; GO:0006351B2GJ30acpS KRH_06530Holo-[acyl-carrier-protein] synthase (Holo-ACP synthase) (EC 2.7.8.7) (4'-phosphopantetheinyl transferase AcpS)2GO:0005737; GO:0006633; GO:0008897; GO:0000287Q6CZZ2rpsM ECA400930S ribosomal protein S132GO:0019843; GO:0005840; GO:0003735; GO:0000049; GO:0006412Q8ZL81STM3670Uncharacterized protein STM36702B8H9C7aspS Achl_2022Aspartate--tRNA(Asp/Asn) ligase (EC 6.1.1.23) (Aspartyl-tRNA synthetase) (AspRS) (Non-discriminating aspartyl-tRNA synthetase) (ND-AspRS)2GO:0005524; GO:0050560; GO:0005737; GO:0003676; GO:0006418Q0S2M9nadE RHA1_ro06432NH(3)-dependent NAD(+) synthetase (EC 6.3.1.5)PATHWAY: Cofactor biosynthesis; NAD(+) biosynthesis; NAD(+) from deamido-NAD(+) (ammonia route): step 1/1. {ECO:0000255|HAMAP-Rule:MF_00193}.2GO:0005524; GO:0009435; GO:0003952; GO:0008795Q6D7J9nagB ECA1326Glucosamine-6-phosphate deaminase (EC 3.5.99.6) (GlcN6P deaminase) (GNPDA) (Glucosamine-6-phosphate isomerase)PATHWAY: Amino-sugar metabolism; N-acetylneuraminate degradation; D-fructose 6-phosphate from N-acetylneuraminate: step 5/5. {ECO:0000255|HAMAP-Rule:MF_01241}.2GO:0006044; GO:0019262; GO:0005975; GO:0004342; GO:0016787A4IJK6rpmD GTNG_012350S ribosomal protein L302GO:0015934; GO:0003735; GO:0006412Q5Z9S8ABCG42 PDR12 Os06g0554800 LOC_Os06g36090 P0458E11.3-1 P0458E11.3-2ABC transporter G family member 42 (OsABCG42) (Pleiotropic drug resistance protein 12) (OsPDR12)275933090GO:0005524; GO:0042626; GO:0016021; GO:0005886; GO:0055085Q8W468ARI8 At1g65430 T8F5.21Probable E3 ubiquitin-protein ligase ARI8 (EC 6.3.2.-) (ARIADNE-like protein ARI8) (Protein ariadne homolog 8)PATHWAY: Protein modification; protein ubiquitination.275933090GO:0005737; GO:0016874; GO:0032436; GO:0000209; GO:0042787; GO:0031624; GO:0000151; GO:0061630; GO:0004842; GO:0008270Q03CY2trpF LSEI_0076N-(5'-phosphoribosyl)anthranilate isomerase (PRAI) (EC 5.3.1.24)PATHWAY: Amino-acid biosynthesis; L-tryptophan biosynthesis; L-tryptophan from chorismate: step 3/5. {ECO:0000255|HAMAP-Rule:MF_00135}.2GO:0004640; GO:0000162B8DHI9thrS LMHCC_1010Threonine--tRNA ligase