SLAS Labware Leachables Special Interest Group SLAS2017 Presentation

70
Identification of Potential Bioactive Leachables and Extractables from Plastic Lab Ware by using GC and LC Separation Methods linked with MS Detection. David A. Weil, Ph.D Senior Applications Scientist Agilent Technologies Wood Dale, IL [email protected]

Transcript of SLAS Labware Leachables Special Interest Group SLAS2017 Presentation

Page 1: SLAS Labware Leachables Special Interest Group SLAS2017 Presentation

Identification of Potential Bioactive Leachables and Extractables from Plastic Lab Ware by using GC and LC Separation Methods linked with MS Detection.

David A. Weil, Ph.DSenior Applications ScientistAgilent TechnologiesWood Dale, IL

[email protected]

Page 2: SLAS Labware Leachables Special Interest Group SLAS2017 Presentation

Overview

SLAS 2017 Meeting

Introduction: Bioactive Compounds

Lab Ware: Plastic or Glass

Leachables and Sample Loss

Challenges of E/L Analysis:

Commonly Found Impurities:

Agilent E and L Solutions Inorganic Analysis using ICP/MS

GC/MS Workflow

Accurate Mass E/L Database

LC/MS Workflows

Questions:

For Research Use Only. Not for use in diagnostic procedures.

Page 3: SLAS Labware Leachables Special Interest Group SLAS2017 Presentation

PFC’s: From Popcorn to French Fries to Clothing

SLAS 2017 Meeting

Silent Spring Institute, Environ. Sci. Technol. Lett

Durable Weather Clothing

Move in Europe to develop PFC Free

Clothing and Consumer Products

Page 4: SLAS Labware Leachables Special Interest Group SLAS2017 Presentation

Bisphenol A

SLAS 2017 Meeting

Baby Bottles

Water Bottles

Expoxy BPA containing Resin Cans

Page 5: SLAS Labware Leachables Special Interest Group SLAS2017 Presentation

Extractable/Leachable Analysis:Pharma/BioPharma, Medical Devices, Food Contact

SLAS 2017 Meeting

Drug Delivery, Container Closure System (CCS), Single-Use-Systems (SUS)

Focus on Identifying E/L Compounds based on RISK

Page 6: SLAS Labware Leachables Special Interest Group SLAS2017 Presentation

No Guidelines or Regulations for Plastic Lab Ware

SLAS 2017 Meeting

Don’t Forget Packaging and Migration of Inks and Adhesives

Page 7: SLAS Labware Leachables Special Interest Group SLAS2017 Presentation

Additives are Everywhere!

SLAS 2017 Meeting

Page 8: SLAS Labware Leachables Special Interest Group SLAS2017 Presentation

Lab Ware Focus Identify Potential Bioactive Contaminants

Glossman et. al. Proc. Natl. Acad. Sci.1993: Tinuvin 770 from Polypropylene plastic tubes was a potential L-type Ca+2-channel blocker

Holt et al, Science 2008: Erucamide, Stearamide (SA), and di(2-hydroxyethyl) methyldodecylammnoium (DiHEMDA) biocide leachable from disposable tubes. Inhibiting monoamine oxidase-B.

Jeffrey McDonald; Anal. Chem. 2008, Identified sorbitol based nuclear clarifying agents extracts from microcentrifuge tubes, various size pipette tips and conical tubes.

J. Biomolecular Screening 2009, With DMSO both Erucamide and Oleoylethanolamide (OEA) extract from pipette tips and are active in a functional bioassay of a G-protein-coupled fatty acid receptor.

J. Biomolecular Screening, 2014, Dilauryl thiodipropionate (DLTDP) AO and break down products leached microplate active in monoamine oxidase-B (MAO-B) inhibition assay.

Clinical Chemistry 2009, Blue Pipette Tips extracted Nonylphenol Ethoxylate that inhibited mitochondrial enzymatic activities

SLAS 2017 Meeting

Page 9: SLAS Labware Leachables Special Interest Group SLAS2017 Presentation

Identification of Leachable Compounds Detrimental to Cell Growth in Single-Use-Bioprocess Containers

Polyethylene Storage

Breakdown Products from

Irgafos 168

Irganox 1010

Irganox 1076

• bDtBPP from Irgafos 168

• 2,4-di-tert-butylphenol

• DtBP

SLAS 2017 Meeting

J Pharm Sci and Tech, 2013, 67, 123-134

Biotechnol. Prog. 2016, 32(6) 1547-1558

Page 10: SLAS Labware Leachables Special Interest Group SLAS2017 Presentation

Process-Relevant Concentrations of the Leachable bDtBPP Impact Negatively on CHO Cell Production Characteristics

SLAS 2017 Meeting

Biotechnol. Prog. 2016, 32(6) 1547-1558

Page 11: SLAS Labware Leachables Special Interest Group SLAS2017 Presentation

Glass vs Plastics: New High Recovery Glass Vials

SLAS 2017 Meeting

Page 12: SLAS Labware Leachables Special Interest Group SLAS2017 Presentation

SLAS 2017 Meeting

bis-(3,4-dimethylbenzylidene

sorbitol diacetal, Irgafos 168,

glycerol stearate and palmitate (SA)

Page 13: SLAS Labware Leachables Special Interest Group SLAS2017 Presentation

What are Extractable/Leachable Compounds?Extractables

• Chemical compounds that can be extracted out of

a packaging, single-use-system, or drug delivery

system at

• High-temperatures: to obtain the worst

case leachable profile

• Solvent extraction: polar and non-polar

solvent to mimic similar properties as drug

product

Leachables

• Chemical compounds from the components that

leach into the final drug product system

• Normal use conditions

• Accelerated storage conditions

Compound migration

• Chemical Compounds that crossed the primary

packaging material barrier from secondary and

tertiary packaging, accumulating in the drug

product

Determining Potential

Compound Migration

Determining Actual

Compound Migration

Leachables

(Drug)

Extractables

(Packaging)

Extractables

Leachables are generally

a subset of extractables

Leachables Leachables

Extractables

New Leachables may be

identified from drug-

packaging interaction

SLAS 2017 Meeting

For Research Use Only. Not for use in diagnostic procedures.

Page 14: SLAS Labware Leachables Special Interest Group SLAS2017 Presentation

Plastic Materials: Source of Contamination

Sources of extractables are plastic and elastomeric components

(monomers, polymeric initiators, plasticizers, etc.) ink and adhesives

(label) and degradation products (processing, storage, sterilization)

Cindy Zweiben, Pfizer, Inc., Characterization of Extractables and Leachable in Parenteral Drug Products

February 8, 2017

Extractable Leachable ASTS 2016

15

Page 15: SLAS Labware Leachables Special Interest Group SLAS2017 Presentation

SLAS 2017 Meeting

Vulcanizing Agents

Antioxidants

Azo Dyes

Phthalates

Lubricants, Slip

Agents, Fatty Acids and EstersNitrosamines

Silicone

Oils

Toxic

Elements (Hg,

Cd, Pb, As, Cr,

W, Tl, Os, Ba)

PAHs

Monomers,

Dimers,

Oligomers

Compounds Frequently Identified as Contaminants

Wide variety of Chemical Classes, Polarity, Molecular Weights, Properties

For Research Use Only. Not for use in diagnostic procedures.

Page 16: SLAS Labware Leachables Special Interest Group SLAS2017 Presentation

Phthalate Additives are Everywhere

SLAS 2017 Meeting

Antoinette M. Reid et. el. (2007) An investigation into possible sources of phthalate contamination in the

environmental analytical laboratory, International Journal of Environmental Analytical Chemistry, 87:2, 125-133

Page 17: SLAS Labware Leachables Special Interest Group SLAS2017 Presentation

Solvent Effects

SLAS 2017 Meeting

Antoinette M. Reid et. el. (2007) An investigation into possible sources of phthalate contamination in the

environmental analytical laboratory, International Journal of Environmental Analytical Chemistry, 87:2, 125-133

Page 18: SLAS Labware Leachables Special Interest Group SLAS2017 Presentation

Common Compounds Leached from Lab-ware

• PAH’s from Elastomers

• Anti-static Agents from Packaging

• Mold Release Agents: Fatty Acids and Fatty acid amide

• Surfactants!

• Stabilizers, Antioxidants, UV inhibitors, Antioxidants

• Break Down Products from Adhesives and Dyes

• Biocides

SLAS 2017 Meeting

Page 19: SLAS Labware Leachables Special Interest Group SLAS2017 Presentation

SLAS 2017 Meeting

Ref: White Paper No 26, Sept 2015 by Eppendorf

Leachables from Plastic Consumables

Page 20: SLAS Labware Leachables Special Interest Group SLAS2017 Presentation

Challenges of Extractable and Leachable Analyses

Extracts contain compounds with wide range of MW, polarity, hydrophobicity,

concentrations, and from commercial sources with wide range of purities

and breakdown/degradation products produced during manufacturing and

sterilization.

• No standardized LC separation method exists.

• Which ionization method(s): ESI, APCI or APPI?

• Acid/Base properties of mobile phase greatly effects ionization efficiency.

• Does higher sensitivity of MS eliminates concentration step.

• Identification: is accurate mass MS and MS/MS enough?

• Databases: open source vs commercial.

SLAS 2017 Meeting

For Research Use Only. Not for use in diagnostic procedures.

Page 21: SLAS Labware Leachables Special Interest Group SLAS2017 Presentation

Key Separation MethodsAnalytical Technology

Analyte Type

Headspace

GC/MS

Volatiles/high migration potential

species(e.g. inks, adhesives, glue, residual solvents)

GC/MS Semi-volatiles(e.g. residual monomers, antioxidants,

plasticizers, hydrocarbon, preservatives, PAHs)

HPLC/UV/MS Non-volatiles(e.g. plasticizer, antioxidants, mold releases,

accelerators, slip agents, lubricants, solubilizing

agents, silicones and low MW polymers)

ICP/OES or ICP/MS

Elemental (e.g.. Leachable Metals, residual catalyst)

Ion Mobility Mass Spectrometry (IMMS)

Oligomers and polymers (e.g. pegylated materials, plasticizers,

surfactants, siloxane0 resin)

OrthogonalChromatography (SFC, 2D LC)

Non-volatile or semi-volatile additives challenging to detect by traditional methods due

to issues of matrix effects, ion suppression,

selectivity and sensitivity

FT-IR Non-volatile organic molecules

CE: Capillary electrophoresis

GFC: Gel-filtration chromatography

SEC: Size-exclusion chromatography

IC: Ion chromatography

Polarity

Mo

lecu

lar

We

ight

HPLC

GC

SEC

CE

GFC

IC

SLAS 2017 Meeting

For Research Use Only. Not for use in diagnostic procedures.

Page 22: SLAS Labware Leachables Special Interest Group SLAS2017 Presentation

Relative Applicability of LC/MS TechniquesM

ole

cu

lar

Weig

ht

Analyte Polarity

API/Electrospray

APPI

APCI

1000

100,000

10,000

nonpolar very polar

Page 23: SLAS Labware Leachables Special Interest Group SLAS2017 Presentation

Extractable and Leachable (E&L) Analysis

• What? Why? How?Overview

• Comprehensive E and L SolutionAgilent Portfolio

• LC/MS Data Analysis Workflow

• GC/MS Data Analysis WorkflowTraining Focus

• Commercialization

• Available collateralSupporting Info

• Who? Their E&L Strategy? How to win against them?Competition

SLAS 2017 Meeting

Page 24: SLAS Labware Leachables Special Interest Group SLAS2017 Presentation

Analytical Technologies Required

SLAS 2017 Meeting

Objective: To detect a wide class of known and unknown organic/inorganic compounds that

maybe present in container closure systems at levels links to risk assessment threshold levels

Mass H

unte

r Data

Analy

sis

Sa

mple

Se

pa

ratio

n

Toxic elements/ Heavy metals

Non-volatile residues

Volatile Residues

Agilent delivers the most comprehensive analytical solutions portfolio

For Research Use Only. Not for use in diagnostic procedures.

Page 25: SLAS Labware Leachables Special Interest Group SLAS2017 Presentation

QQQ

6400 series

TOF

6200 series

7010

GC/QQQ

Q-TOF

6500 series

7200

GC/QTOF7900 ICP-MS

Cary 610

FTIR Microscopes

7697A Headspace GC

5100 ICP-OES

Infinity II

LC Systems

SQ

6100 series

Agilent’s Comprehensive Portfolio for E&L Analysis

MassHunter Control

SLAS 2017 Meeting

For Research Use Only. Not for use in diagnostic procedures.

Page 26: SLAS Labware Leachables Special Interest Group SLAS2017 Presentation

SLAS 2017 Meeting

ICPMS Case Study

For Research Use Only. Not for use in diagnostic procedures.

Page 27: SLAS Labware Leachables Special Interest Group SLAS2017 Presentation

Elemental E&Ls in Eye Drops

SLAS 2017 Meeting

Aqueous Extract

PH 2.5

Aqueous Extract

PH 9.5IPA/Water 50/50

Sealed Vessel

121°C

Sealed Vessel

121°CSonication Sonication Reflux

3 hoursSealed Vessel

55°C / 3d

Elemental Analysis

by ICP-MS and ICP-OES

ExtractionExtraction Techniques:

• Sonication (2 hrs, T=10°C)

• Sealed Vessel (55 °C / 3 d)

• Sealed Vessel (140 °C / 1 hr)

Purchased from

the DollarTree

in Berkeley, CA

Agilent 7900 ICP-MS

Agilent App Note in Progress !

For Research Use Only. Not for use in diagnostic procedures.

Page 28: SLAS Labware Leachables Special Interest Group SLAS2017 Presentation

Extraction conditions vs. number of found elements

SLAS 2017 Meeting

For Research Use Only. Not for use in diagnostic procedures.

Page 29: SLAS Labware Leachables Special Interest Group SLAS2017 Presentation

Agilent Publications about USP <232>/<233>

SLAS 2017 Meeting

pub 5990-9382EN, 2014 pub 5990-9365EN, 2015

For Research Use Only. Not for use in diagnostic procedures.

Page 30: SLAS Labware Leachables Special Interest Group SLAS2017 Presentation

ICP-OES App Note following USP <661.1> protocols

SLAS 2017 Meeting

Page 31: SLAS Labware Leachables Special Interest Group SLAS2017 Presentation

SLAS 2017 Meeting

GC/MS Workflow Examples

For Research Use Only. Not for use in diagnostic procedures.

Page 32: SLAS Labware Leachables Special Interest Group SLAS2017 Presentation

Agilent’s GC/MS Portfolio

5977B

SQ

7000D,

7010B

TQ

7200

QTOF

Plus various sample introduction devices:

Headspace sampler, Thermal Desorber, Purge and trap, Twister, etc.

For Research Use Only. Not for use in diagnostic procedures.

SLAS 2017 Meeting

Page 33: SLAS Labware Leachables Special Interest Group SLAS2017 Presentation

Agilent’s GC/MS Portfolio

5977B

SQ

7000D,

7010B

TQ

7200

QTOF

Plus various sample introduction devices:

Headspace sampler, Thermal Desorber, Purge and trap, Twister, etc.

High Efficiency Ion Source

JetClean

For Research Use Only. Not for use in diagnostic procedures.

SLAS 2017 Meeting

Page 34: SLAS Labware Leachables Special Interest Group SLAS2017 Presentation

Agilent’s GC/MS Portfolio

5977B

SQ

7000D,

7010B

TQ

7200

QTOF

Plus various sample introduction devices:

Headspace sampler, Thermal Desorber, Purge and trap, Twister, etc.

High Efficiency Ion Source

JetClean

Intuvo GC

For Research Use Only. Not for use in diagnostic procedures.

SLAS 2017 Meeting

Page 35: SLAS Labware Leachables Special Interest Group SLAS2017 Presentation

Agilent’s GC/MS Portfolio

5977B

SQ

7000D,

7010B

TQ

7200

QTOF

Plus various sample introduction devices:

Headspace sampler, Thermal Desorber, Purge and trap, Twister, etc.

High Efficiency Ion Source

JetClean

Intuvo GC

For Research Use Only. Not for use in diagnostic procedures.

SLAS 2017 Meeting

Page 36: SLAS Labware Leachables Special Interest Group SLAS2017 Presentation

For Research Use Only. Not for use in diagnostic procedures.

SLAS 2017 Meeting

Page 37: SLAS Labware Leachables Special Interest Group SLAS2017 Presentation

SLAS 2017 Meeting

Page 38: SLAS Labware Leachables Special Interest Group SLAS2017 Presentation

Extractable and Leachable (E&L)

• What? Why? How?Overview

• Positioning and Value Proposition

• Differential Analysis Software Overview and Positioning

Agilent Portfolio

• LC/MS Qualitative Data Analysis WorkflowWorkflow Focus

• Commercialization

• Available collateralSupporting Info

• Who? Their E&L Strategy? How to win against them?Competition

SLAS 2017 Meeting

Page 39: SLAS Labware Leachables Special Interest Group SLAS2017 Presentation

Extractable/Leachable LC-QTOF WorkflowM

ass H

unte

r Data

Analy

sis

Sam

ple

Separa

tion

Semi-Volatile and

Non-volatile Residues

Extra

ctio

ns

Samples -Standards

-Extracts Drug Containers

-Extracts Drug Product

ChromatographyColumns: C18/C8/C3

Organic Mobile Phase:

ACN, MeOH, ACN/IPA,

MeOH/IPA

Varied Buffers: None,

0.1% Formic Acid, 2mM &

4mM NH4Acetate

Ionization SourcesJet Stream (ESI),

APCI, Multimode

MS-Instrument 6530 / 6545 / 6550

SLAS 2017 Meeting

Page 40: SLAS Labware Leachables Special Interest Group SLAS2017 Presentation

Comparing C3, C8, C18 Separations Using Same BuffersBase Peak Chromatograms

C3

C8

C18

Results: C3 Column Optimum for Higher Mass Extractables

Create orthogonality by using multiple chemistriesSLAS 2017 Meeting

Page 41: SLAS Labware Leachables Special Interest Group SLAS2017 Presentation

Agilent 6545 QTOF Performance 50K Resolution and <1ppm Accuracy on 6545 QTOF

Mass

(m/z)

Resolution

(FWHM)

Accuracy

(ppm)

118.0862 19599 0.01

322.0481 32295 -0.05

622.0290 41212 0.05

922.0098 45590 0.01

1221.9906 49020 -0.04

1521.9716 51019 0.06

2121.9332 53292 0.04

2421.9140 52961 0.05

2721.8947 53277 -0.03

53,277 mass resolution for

2,722 m/z ion

SLAS 2017 Meeting

Page 42: SLAS Labware Leachables Special Interest Group SLAS2017 Presentation

6x10

0

0.2

0.4

0.6

0.8

1

1.2

1.4

1.6

1.8

2

2.2

2.4

2.6

2.8 455.290321

(M+H)+

441.274704

471.284287

487.279822

(M+H)+

Counts vs. Mass-to-Charge (m/z)435 440 445 450 455 460 465 470 475 480 485 490 495 500 505

Wide In-spectrum Dynamic RangeFive decades of response in a single scan

2.68 million

counts

25 counts

verapamil dihydroxy metabolite of verapamil

desmethyl

metabolite

monohydroxy

metabolite

400

counts

verapamil

SLAS 2017 Meeting

Page 43: SLAS Labware Leachables Special Interest Group SLAS2017 Presentation

Irganox 1093

Irganox 1076

Irganox 1330

Irgacure 369

C38H78SO7

C26H29PO4

Irganox 1035

Ionization Modes: APCI vs Jet Stream ESIExamples: Irganox and Irgacure Mixture

Red = APCI

Blue = Jet Stream

SLAS 2017 Meeting

Page 44: SLAS Labware Leachables Special Interest Group SLAS2017 Presentation

Mass Profiler: Stem DCM Extract Jet Stream vs APCI

SLAS 2017 Meeting

Polyol surfactant

Page 45: SLAS Labware Leachables Special Interest Group SLAS2017 Presentation

SLAS 2017 Meeting

Page 46: SLAS Labware Leachables Special Interest Group SLAS2017 Presentation

Extractable and Leachable Accurate Mass LC/MS PCDL

• Comprehensive database with > 1000 compounds

• Library with accurate MS/MS mass spectra from > 350

compounds for seamless integration into the All Ions workflow

• Retention times for > 129 compounds

• Database/library are designed and curated for highest quality

& reliability

• Easy development of screening LC/MS methods

• Use with 1260/1290 Infinity LC, and high resolution 6200

Series TOF & 6500 Series Q-TOF LC/MS Systems

• Literature references for first pass risk assessment (e.g.

ELSIE cross-references)

• Continuous refresh with new spectra -3 years of free PCDL

updates

1290 Infinity II UHPLC

6550 iFunnel LC/Q-TOF

Quickly and Confidently Identify Known E & L Compounds

For Research Use Only. Not for use in diagnostic procedures.SLAS 2017 Meeting

Page 47: SLAS Labware Leachables Special Interest Group SLAS2017 Presentation

Increasing Your Confidence in Compound Identification

Accurate Mass (AM)

AM +

Isotope Pattern

(IP)

AM

+

Retention

Time (RT)

+

IP

MS/MS Library

AM

+

RT

+

MS/MS

Library

Confident

compound

identification

is crucial

SLAS 2017 Meeting

For Research Use Only. Not for use in diagnostic procedures.

Page 48: SLAS Labware Leachables Special Interest Group SLAS2017 Presentation

Database Content and Curation

Agilent

Custom

DatabaseELSIE

Compounds

Agilent

Database

E&L

Database

Entries

SWISS

Lists

Jenke &

Carlson 1

Compounds

SciFinder

Chemspider

Pubchem

Curation of

Compound

Data and

Spectra

Agilent

E&L PCDL

For Research Use Only. Not for use in diagnostic procedures.

Ref 1: PDA JPST, Jenke and Carlson: PDA J Pharm Sci Technol 2014 Sep-Oct;68(5):407-55. "A compilation of safety impact

information for extractables associated with materials used in pharmaceutical packaging, delivery, administration, and manufacturing

systems."

SLAS 2017 Meeting

Page 49: SLAS Labware Leachables Special Interest Group SLAS2017 Presentation

MassHunter PCDL Manager Software

Library

- Normalized MS/MS spectra

- Positive and negative polarity

- Multiple adduct ion species

- Multiple collision energies

- Additional spectra can be added

- Spectra acquired at 10, 20, and 40 V collision energies for

multiple confirmation points, and other energies if needed

SLAS 2017 Meeting

Database

- Names, formulas, monoisotopic

masses, structures, common identifiers

- Retention times from experimental data

- Fully searchable and integrated into

Mass Hunter Software suite

- Additional compounds can be added

- Class tags allow easy generation of

personalized/subset PCDLs

For Research Use Only. Not for use in diagnostic procedures.

Page 50: SLAS Labware Leachables Special Interest Group SLAS2017 Presentation

What is “Curation”?: PCDL Curating compound information is very time-consuming – we can save you that time…

SLAS 2017 Meeting

Essential Chemical list

• Carefully selected and

prioritized by experts.

• Reviewed for relevance in

application area in question (e.g.

E&L)

Common

name: Verified

from multiple

different

sources for

commonalityAccurate and up-to-date

compound information: IUPAC

name, accurate mass of neutral

molecule, molecular formula,

molecular structure, Chemspider,

CAS etc.

Notes Area:

• Compound class

tags

• Regulation tags

and references

• Chinese,

Japanese and

English synonyms

• Toxicology

research

references

• Outdated and

alternative CAS

identifiers

• Compound

descriptions

Page 51: SLAS Labware Leachables Special Interest Group SLAS2017 Presentation

Retention Time for Increased Confidence

SLAS 2017 Meeting

Factors causing your retention times to differ include different instrument

delay volumes, dead volumes or configuration changes.

Retention time information added to 129 compounds, thus adding in

retention time to the identification score and increasing identification

confidence. Our RTs can be used as reference

• Retention times are included for 129 compounds in the E_n_L_AMRT_PCDL.

• Retention times can be specified as optional or required in your MassHunter

Qualitative Analysis workflow

• System Configuration document describing necessary chromatographic setup

allows you to replicate retention times

Page 52: SLAS Labware Leachables Special Interest Group SLAS2017 Presentation

Entitlement to 3-year Free UpdateWhen you buy the standalone tMRM DB/PCDL, you will be entitled to a 3-year free update via

SubscribeNet.

Snapshot of SubscribeNet

When you order standalone database/library, you will

o Receive an activation code.

o Go to SubscribeNet and create a profile.

o Enter the activation code, see a line item with a link to the software they purchased

with a visible Expiration Date.

o Receive an email when a new update of database/library is released.

o Go to the website and download it If your product has not expired. The Expiration Date

is 3 years after the day you register on SubscribeNet with the activation code.

SLAS 2017 Meeting

Page 53: SLAS Labware Leachables Special Interest Group SLAS2017 Presentation

What is “Curation”: PCDL Library Spectra Example

SLAS 2017 Meeting

• Each precursor and product ion peak are corrected to

theoretical accurate mass

• Spectra acquired at 10, 20, and 40 V collision energies

• Spectra acquired with more collision energies if

necessary in separate data file

• Spectra measured in positive and/or negative ion

mode where applicable

• Spectra measured for multiple ion species

• Spectra are filtered for signal intensity and curated for:

• Spectrum noise

• Chemical impurities

• Incorrectly set instrumentation parameters

10V

40V

20V

Page 54: SLAS Labware Leachables Special Interest Group SLAS2017 Presentation

SLAS 2017 Meeting

Add YOUR curated accurate MS/MS spectra to new or existing compound entries

PCDL Library Spectra

FBF = Find by Formula

Open data in

MH Qual

Open method

(LibrarySearching-

Default.m)

FBF wt extract

MS/MS spectra

Check annotation

SEND to PCDL

Export curated spectra to

customized PCDL

Curate spectra by

filtering on:

• Calculated m/z (MS/MS

annotated peaks)

• Minimum base peak

abundance

• Spectral noise

Annotated MS/MS Spectra for

Benzothiazole

CE: 20 eV

CE: 10 eV

CE: 40 eV

CE: 20 eV

CE: 10 eV

CE: 40 eV

Untargeted QTOF data can be retrospectively reviewed

with addition of new compounds

Page 55: SLAS Labware Leachables Special Interest Group SLAS2017 Presentation

MassHunter Profinder Mass Profiler Professional

Agilent LC/MS

Process/ID Profilingdetect

High Level Data Analysis Workflow for LC/MS Data

For Research Use Only. Not for use in diagnostic procedures.

MassHunter Profiler

SLAS 2017 Meeting

Page 56: SLAS Labware Leachables Special Interest Group SLAS2017 Presentation

What Does Molecular Feature Extractor Do?

Raw data Background noise

removed

Individual m/z peaks

grouped into isotope

clusters

Isotope

clusters

grouped into

molecular

features

Identification, Quantification, Differential Analysis are performed on chemically qualified

compound data

SLAS 2017 Meeting

Page 57: SLAS Labware Leachables Special Interest Group SLAS2017 Presentation

Profinder Software Automated Data Mining

• Batch Processing Feature Extraction

for Differential Analysis

• Supports Data from:

GC/MSD and GC/QTOF

LC/TOF and LC/QTOF

• Wizard Driven Software

• Targeted or Untargetd Analysis

• Supports Differential and All Ions

• Seamlessly integrated with

differential analysis software

programs

• Minimizes false positive and

negative results

SLAS 2017 Meeting

Page 58: SLAS Labware Leachables Special Interest Group SLAS2017 Presentation

Differential Analysis for E&L StudiesMass Profiler and Mass Profiler Professional

Mass Profiler (MP) Mass Profiler Professional (MPP)

LC/MS Untargeted Feature Finding (With Profinder)

LC/MS Targeted Feature Finding (With Profinder) (With Profinder)

Normalization

Abundance Filter

Fold Change Filter

Frequency Filter

PCA Plots

Database search

2 Sample Set Analysis

Multiple Sample Set Analysis

Advanced Data Visualization

Advanced Statistical Analysis

GC/MS EI data

For Research Use Only. Not for use in diagnostic procedures.

SLAS 2017 Meeting

Page 59: SLAS Labware Leachables Special Interest Group SLAS2017 Presentation

Non-Target Screening: Unknown Discovery

SLAS 2017 Meeting

Mass Profiler Professional: Multivariate Analysis

Study looks at characterising extractables from 4 different gaskets using 3

different solvents.

Gaskets:

E3609-70

FF350-75

HF355-65

S1138-70

Solvents:

Isopropyl Alcohol (IPA)

Dichloromethane (DCM)

Heptane

Using multivariate analysis of all permutations allows the dissection of

common and unique extractables across the study.

Samples were kindly provided by Andrew Feilden, Smithers Rapra, UK

Page 60: SLAS Labware Leachables Special Interest Group SLAS2017 Presentation

Non-Target Screening: Unknown Discovery

SLAS 2017 Meeting

Mass Profiler Professional : Multivariate Analysis

• Four different gaskets were extracted with DCM, IPA and Heptane.

• Molecular Feature Extraction was used to reveal compounds, while Multivariate analysis allows us to examine the differential

presence of the compounds in each gasket.

Page 61: SLAS Labware Leachables Special Interest Group SLAS2017 Presentation

Non-Target Screening: Unknown Discovery

SLAS 2017 Meeting

Mass Profiler Professional :

Multivariate Analysis

• Four different gaskets

were extracted with

DCM.

• Molecular Feature

Extraction was used to

reveal compounds.

• Multivariate analysis

allows us to examine the

differential presence of the

compounds in each

gasket.

Page 62: SLAS Labware Leachables Special Interest Group SLAS2017 Presentation

Non-Target Screening: Unknown DiscoveryMass Profiler Professional : Multivariate Analysis

SLAS 2017 Meeting

Four different gaskets were extracted with DCM. Using Molecular Feature Extraction to reveal compounds and

multivariate analysis to examine their differential presence, the extractables in each gasket can be investigated.

This shows that no compounds were

extracted from all gaskets and each

gasket has compounds extracted

exclusively from them.

E3609-70 -112

FF350-75 – 1

S1138-70 – 121

HF335-65 -19

Page 63: SLAS Labware Leachables Special Interest Group SLAS2017 Presentation

Acknowledgements

Robert Williams

Syed Lateef

Emma Rennie

Mahsan Miladi

Dorothy Yang

Thomas Glauner

Andrew Feilden (SR)

SLAS 2017 Meeting

Maria VanDamme

Smriti Khera

Kai Chen

Sarah Xu

Shi-Fen Xu

With slides and significant input from…

Page 64: SLAS Labware Leachables Special Interest Group SLAS2017 Presentation

SLAS 2017 Meeting

For Research Use Only. Not for use in diagnostic procedures.

Page 65: SLAS Labware Leachables Special Interest Group SLAS2017 Presentation

Appendix

SLAS 2017 Meeting

For Research Use Only. Not for use in diagnostic procedures.

Page 66: SLAS Labware Leachables Special Interest Group SLAS2017 Presentation

References

SLAS 2017 Meeting

• USP Plastic Packaging General Chapters: An Overview, D. Jenke, D. Norwood, Packaging, Storage, and Distribution Expert Committee, USP,

http://www.usp.org/sites/default/files/usp_pdf/EN/meetings/workshops/stim_article_661_final.pdf

• USP <1663> ASSESSMENT OF EXTRACTABLES ASSOCIATED WITH PHARMACEUTICAL PACKAGING/DELIVERY SYSTEMS

http://www.usp.org/sites/default/files/usp_pdf/EN/meetings/workshops/m7126.pdf

• USP <1664> ASSESSMENT OF DRUG PRODUCT LEACHABLES ASSOCIATED WITH PHARMACEUTICAL PACKAGING/DELIVERY SYSTEMS

http://www.usp.org/sites/default/files/usp_pdf/EN/meetings/workshops/m7127.pdf

• Guidelines on Plastic Immediate Packaging Materials, EMEA, European Medicines Agencies Inspections, 2005,

http://www.ema.europa.eu/docs/en_GB/document_library/Scientific_guideline/2009/09/WC500003448.pdf

• Recommendations for Extractables and Leachables Testing, Introduction, Regulatory Issues and Risk Assessment,

BioProcess International 5(11):pp36-49 (December 2007),

http://www.bpsalliance.org/wp-content/uploads/2014/06/BPSA-Extractables-101-BPI-Suppl-May-2008.pdf

• Recommendations for Extractables and Leachables Testing, Executing a Program,

BioProcess International 6(1):pp44-53 (January 2008) ,

http://www.bioprocessintl.com/wp-content/uploads/bpi-content/BPI_A_080601AR06_O_76422a.pdf

• The chemical safety assessment process for extractables and leachables associated with packaged pharmaceutical products,

D. Jenke, European Pharmaceutical Review, Volume 18, Issue 1, 2013,

http://www.europeanpharmaceuticalreview.com/wp-content/uploads/EPR-Manufacturing-Packaging-Supplement-2013.pdf

• Metal Leachables in Therapeutic Biologic Products: Origin, Impact and Detection, Shuxia Zhou et al, Americal Pharmaceutical Review, May 01, 2010, http://www.americanpharmaceuticalreview.com/Featured-Articles/116570-Metal-Leachables-in-Therapeutic-Biologic-Products-Origin-Impact-and-Detection/

• Newsletter of the AAPS Aggregation and Biological Relevance Focus Group, May 2011, volumn2, Issue

https://www.aaps.org/uploadedFiles/Content/Sections_and_Groups/Focus_Groups/PABCFGnewsMay2011.pdf

• Development of Biotechnology Products in Prefilled Syringes: Technical Considerations and Approaches, Advait Badkar et al.,

AAPS PharmSciTech, Vol. 12, No. 2, June 2011: https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3134644/pdf/12249_2011_Article_9617.pdf

For Research Use Only. Not for use in diagnostic procedures.

Page 67: SLAS Labware Leachables Special Interest Group SLAS2017 Presentation

References• HPLC and LC/MS Analysis of Pharmaceutical Container Closure System Leachables and Extracatbles, D. Norwood et al.,

Journal of Liquid Chromatography & Related Technologies, 32: 1768-1827, 2009

• Application of the threshold of toxicological concern ( TTC) concept to the safety assessment of chemically complex food matrices,

M.A.J. Rennen et al., Food and Chemical Toxicology 49.(2011) 933-940

• Leachables and Extractables Handbook, Safety Evaluation, Qualification and Best Practices Applied to Inhalation Drug Products; First Edition, D.

Ball, D. Norwood, C Stults, L. Nagao, John Wiley& Sons, Inc, Published 2012

• Development of Safety Qualification Thresholds and Their Use in Orally Inhaled and Nasal Drug Product Evaluation,

Douglas Ball et al., Toxicological Sciences 97 (2), 226 – 236 (2007)

• Regulatory Perspective on Safety Qualification of Extractables and Leachables, Ingrid Markovic ,PQRI Workshop, Bethesda (MD), Feb 22, 2011

http://pqri.org/wp-content/uploads/2015/11/Markovic.pdf

• Regulatory Perspective on E&L in Biologics: Quality Considerations, Ingrid Markovic, UPS/PQORI E&L Workshop, April 28, 2014, Rockville ( MD)

https://www.usp.org/sites/default/files/usp_pdf/EN/meetings/09_markovich_presentation.pdf

• SAFETY THRESHOLDS AND BEST PRACTICES FOR 6 EXTRACTABLES AND LEACHABLES IN ORALLY INHALED 7 AND NASAL DRUG

PRODUCTS, PQRI, 2006, http://pqri.org/wp-content/uploads/2015/08/pdf/LE_Recommendations_to_FDA_09-29-06.pdf

• Current FDA Perspective on Leachable Impurities in Parenteral and Opthalmic Drug Products, AAPS Workshop on Pharmaceutical Stability, 2011,

D. Lewis, http://www.fda.gov/downloads/AboutFDA/CentersOffices/OfficeofMedicalProductsandTobacco/CDER/UCM301045.pdf

• Subvisible Particulate Matter, Development in Regulations and Low Volume Methods, Satish K. Sing, AAPS Workshop 2014,

http://www.aaps.org/uploadedFiles/Content/Sections_and_Groups/Focus_Groups/Protein_Aggregation_and_Biological_Consequences/PABCFG

Wrkshp20114_Singh.pdf

• Creating a holistic extractable & leachables (E&L) program for biotechnology products, Kim Li, Gary Rogers, Yasser Nashed-Samuel, et al., PDA J

Pharm Sci and Tech 2015, 69, 590-619, http://www.ncbi.nlm.nih.gov/pubmed/26429108

• Creating a Holistic Extractables and Leachables (E&L) Program for Biotechnology Products; Kim Li et al., PDA J Pharm Sci and Tech 2015, 69

590-619

SLAS 2017 Meeting

For Research Use Only. Not for use in diagnostic procedures.

Page 68: SLAS Labware Leachables Special Interest Group SLAS2017 Presentation

SLAS 2017 Meeting

• Perspectives on the PQRI Extractables and Leachables “ safety thresholds and best practices” recommendations for inhalation drug products,

D. Norwood, L. Nagao, C. Stults, PDA J Pharm Sci and Tech 2013, 67, 413 – 429

http://steriletechportal.pda.org/?q=content/pdajpst/67/5/413.full.pdf

• SAFETY THRESHOLDS AND BEST PRACTICES FOR 6 EXTRACTABLES AND LEACHABLES IN ORALLY INHALED 7 AND NASAL DRUG PRODUCTS,

PQRI, 2006, http://pqri.org/wp-content/uploads/2015/08/pdf/LE_Recommendations_to_FDA_09-29-06.pdf

• Current FDA Perspective on Leachable Impurities in Parenteral and Opthalmic Drug Products, AAPS Workshop on Pharmaceutical Stability, 2011,

D. Lewis, http://www.fda.gov/downloads/AboutFDA/CentersOffices/OfficeofMedicalProductsandTobacco/CDER/UCM301045.pdf

• Determination of elemental impurities in leachate solutions from syringes using sector field ICP-mass spectrometry,

K. Van Hoecke, C. Catry, F. Vanhaecke, Journal of Pharmaceutical and Biomedical Analysis, 77 (2013), 139-144

• Identification and analysis of polymer additives using packed-column supercritical fluid chromatography with APCI mass spectrometric detection,

M. Carrot, D. Jones, G. Davidson, Analyst, 1998, 123, 1827-1833

• Utilization of Internal Standard Response Factors to Estimate the Concentration of Organic Compounds Leached from Pharmaceutical Packaging Systems

and Applications of Such Estimated Concentrations to Safety Assessment, D.Jenke and A.Odufu,

Journal of Chromatographic Science, 2012; 50:206-212

• Standardized Extractables Testing Protocol for Single-Use Systems in Biomanufacturing, Weibin Ding et al., Pharmaceutical Engineering,

November/December, Vol 34, No 6, 2014

• Minimizing immonogenicity of biopharmaceuticals by controlling critical quality attributes of proteins, Miranda van Beers; Muriel Bardor

Biotechnol. J. 2012, 7

• A Method Utilizing Ultra-High Performance Liquid Chromatography and Mass Spectrometric Detection for the Analysis of Material Extracts Produced

During a Controlled Extraction Study; Steven A. Zrdavkovic et.al; PDA J Pharm Sci and Tech 2014, 68 504-526

• Controlled Extraction studies Applied to Polyvinyl Chloride and Polyethylene Materials: Conclusions from the ELSIE Controlled Extraction Pilot Study,

Andrew Teasdale et al.; AAPS PharmSciTech, Vol 16, No 3, June 2015

• Risk-Based Scientific Approach for Determination of Extractables/Leachables from Biomanufacturing on Antibody-Drug Conjugates (ADCs); Weibing Ding;

From Antibody Drug Conjuagtes, Methods in Molecular Biology, Springer Verlag, vol. 1045, pp 303 – 311

• Single-use in biopharmaceutical industry: A review of current technology impact, challenges and limitation,

Adriana G. Lopes, Food and Bioproducts Processing 93 (2015) 98-114

• A Compilation of Safety Impact Information fo Extractables Associated with Material Used In Pharmaceutical Packaging, Delivery, Administration,

and Manufacturing Systems, D. Jenke and T. Carlson, PDA J Pharm Sci and Tech 2014, Vol. 68, 407-455

• Safety Risk Categorization of Organic Extractables Associated with Polymers used in Packaging , Dennis Jenke, Pharm Res (2015) 32:1105-1127

References

For Research Use Only. Not for use in diagnostic procedures.

Page 69: SLAS Labware Leachables Special Interest Group SLAS2017 Presentation

REF: Porex Corporation

SLAS 2017 Meeting

Page 70: SLAS Labware Leachables Special Interest Group SLAS2017 Presentation

FluidX GC/MS Analysis of PP Sample Storage

SLAS 2017 Meeting

Extraction with Ethanol at 20oC for 24 hours

Ref: Poster from FluidX, Robin Grimwood, Brooks Life Science Systems, Stockport, UK