SH course 2 [兼容模式] - 中国科学院生物化学 ... · Organism to Study Human Disease •...

64
以果蝇为模式研究神经发育和 智力低下的分子遗传机制 张永清 张永清 中科院遗传与发育生物学研究所

Transcript of SH course 2 [兼容模式] - 中国科学院生物化学 ... · Organism to Study Human Disease •...

Page 1: SH course 2 [兼容模式] - 中国科学院生物化学 ... · Organism to Study Human Disease • Small size, ... Candidate Modifiers Were Identified ... brat and futsch acts antaggyyponistically

以果蝇为模式研究神经发育和

智力低下的分子遗传机制

张永清张永清

中科院遗传与发育生物学研究所

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Mental Retardation and MR-related Genes

Ch t i ti f l FMRP tCharacterization of novel FMRP partners

dFMRP interacts with Brat in regulating synapse growthin regulating synapse growth

dFMRP regulates MT formationdFMRP regulates MT formationand interacts with spastin

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M t l t d tiMental retardation(Intellectual Disability)(Intellectual Disability)

li d di d h t i da generalized disorder, characterized by significantly impaired cognitive y g y p gfunctioning and deficits in two or more adaptive behaviors with onset beforeadaptive behaviors with onset before the age of 18. 1-3% of general g gpopulation is mentally retarded

from wikipedia.com

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>300 MR genes cloned, >1000 entries registered

Inlow and Restifo, Genetics, 2004

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Identification of X-linked MR loci

202 201 215202 201

Chiurazzi et al., European Journal of Human Genetics, 2008

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82 MR genes on the X-chromon the X-chrom.

Syndromic MR: black yNon-syndromic MR: *greyMR with neuromuscular defects: +grey

Chiurazzi et al., EJHG, 2008

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Molecular Functions of MR Genesunknown

4% cell cycle4%

proteinsynthesis

3%

RNAprocessing

ubiquitin cycle3%

4%3%p g3%

DNA 3%

cell adhesion4%

metabolism3%

3 4%metabolism15% signal

transduction2

3

transcription

19%1

35pregulation

22%t k l t

membranecomponent

5

cytoskeleton5%

15%

Chiurazzi et al., EJHG, 2008

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Neuronal functions of MR-related genes

1 Neurogenesis (microcephaly)1, Neurogenesis (microcephaly)

2, Neuronal migration (Lissencephaly)

3 Synapse formation and plasticity3, Synapse formation and plasticity (Fragile X syndrome)

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Neuronal functions of MR-related genes

1 Neurogenesis (microcephaly)1, Neurogenesis (microcephaly)

2, Neuronal migration (Lissencephaly)

3 Synapse formation and plasticity3, Synapse formation and plasticity (Fragile X syndrome)

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Pre-synaptic

Post-synaptic

23 MR Genes

actin

Vaillend et al., Behavioral Brain Research, 2008

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Synapse dysgenesis in MR patients

Purpura, Science, 1974Dendritic spines

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Modeling of Fragile X Syndrome i F it Fliin Fruit Flies

1, Introduction of Fragile X Syndromeg y

2, Dissecting the Functions of FMRP via a Genetic Approachvia a Genetic Approach

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脆性X的临床特征脆性X的临床特征• Occurrence: Most common form of inherited • Occurrence: Most common form of inherited

mental retardation worldwide

• Physical: large ears, enlarged testes

• Behavioral and Cognitive:Mental retardation (IQ < 60)– Mental retardation (IQ < 60)

– Attentional-organizational dysfunction, autismautism

– Speech deficitH ti it i i l i t– Hyperactivity, seizures, social anxiety

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脆性X的临床特征• Occurrence: Most common form of inherited

脆性X的临床特征• Occurrence: Most common form of inherited

mental retardation worldwide

• Physical: large ears, enlarged testes

• Behavioral and Cognitive:Mental retardation (IQ < 60)– Mental retardation (IQ < 60)

– Attentional-organizational dysfunction, autismS h d fi it– Speech deficit

– Hyperactivity, seizures, social anxiety

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脆性 是 常 遗传病脆性X是一常见遗传病

1 in 4000 males and 1 in 6000 females

1 in 259 women carry Fragile X y g

1 in 800 men carry Fragile X 800 e ca y ag e

1-3% mentally retarded

No cure for mental retardation

1 3% mentally retarded

No cure for mental retardation

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Large Ears and Large TestesLarge Ears and Large Testes

Gu et al., Asian Journal of Andrology, 2006

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刘备的儿子刘禅 大竖耳 扶不起的阿斗刘备的儿子刘禅、大竖耳,扶不起的阿斗有可能脆性X智力低下

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Diagnostic Cytogenetic Marker: a Break at the Tip of X

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T i l tid E i DiTrinucleotide Expansion Disease

Coding region5’ 3’CGG

Normal

20-50

g gCGG

50 200

正常

Coding region5’ 3’CGG

Pre-muta.

50-200

CGG

>200

前突变

Coding region5’ 3’CGG

Full muta.全突变

Fragile X全突变

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Multi-domain, RNA Binding FMRP Multi domain, RNA Binding FMRP

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神经突触发育异常神经突触发育异常

KO mouse

spine

More numerous, structurally structurally abnormal

d d iti idendritic spines

Control mouse

Comery et al., PNAS, 1997 10 μm

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212 9

11

823

20

30

21

22

19

31

26

2834 29

1

2

36

54 10

7

14

13 15

1816

17

20

24

21

3125

31

33

32

2730

7 17 24

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A Simple System With Complex BehaviorsDrunken Stoned

Sleep

FightingL i dl Learning and

memoryHomosexual

courting adapted from Yi Zhong

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Drosophila is an Ideal Model pOrganism to Study Human Disease

• Small size, short life cycle

V d i• Very productive

• Harmless, easy to handle

• Huge collection of mutants

• Well developed and hi ti t d ti t lsophisticated genetic tools

C d • Conserved genome sequence, 75% (1378) disease genes have fly homologueshave fly homologues

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The Nobel Prize in Physiology or Medicine 1933

For his discoveries concerning the role played by the chromosome in heredity y

Morgan, T.H. Science, 1910. Sex limited inheritance in Drosophila

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The Drosophila model: dfmr1 genep gSingle, Conserved Ortholog

Making Mutantsp[EP]3517

p[EP]3422 1 KB PolyA PolyATransposon Inserts

² 50M² 83M Imprecise

E i i All l ² 113M ² 192N

Revertant

Excision Alleles (null mutants)

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A Model Synapse (突触模型)A Model Synapse (突触模型)Neuromuscular Junction (NMJ) SynapsesNeuromuscular Junction (NMJ) Synapses

Motor neuron cell body

axon

NMJ synapses

muscle

Big Simple Accessible

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FMRP Has a Conserved Function at Synapsesat Synapses

Comery et al., PNAS, 1997

dfxrNOEWTn

dfxrn

dfxrMOE revertantn

Comery et al., PNAS, 1997

1bn

n

n

n

KO

Control MutantControl MutantWTZhang et al., Cell, 2001

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dFMRP Regulates Microtubule Dynamics dFMRP Regulates Microtubule Dynamics in Nervous System and Testes

Nervous system

Futsch /MAP1B

MT stability synaptic structure/function

y

dFMRP/MAP1B structure/function

????? cMT missing immotile sperm????? cMT missing immotile sperm

Spermatogenesis

Zhang et al., Cell 107: 591-603, 2001 Zhang et al., Developmental Biology, 2004

Zhang and Broadie, Trends in Genetics, 2005Pan et al., Current Biology, 2004

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FMRP’s Partners Remain Uncharacterized

Zhang and BroadieTIG 21, 2005

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Modeling of Fragile X Syndrome i F it Fliin Fruit Flies

1, Introduction of Fragile X Syndromeg y

2, Dissecting the Functions of FMRP via a Genetic Approachvia a Genetic Approach

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Forward Genetics–FMRP Suppressors

*

*

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突变体中的各种突变位点突变体中的各种突变位点

Point Mutations

Sup29: R47C EMA: E68K (5)Sup10/5b: G80D Sup18: R115C (4), 115HWAug11: A158T, 158V LDec8m: S174F*Point Mutations WSep6Af: L186H LDec8m: G220E ZHNu: G269E (2) G269R XDL: R279C (2)SAug21Df: V354E Sup Nu10/1:Q378P

**

SAug21Df: V354E Sup Nu10/1:Q378P

* *** * *24 missense, 12 AA

**

* **** *

**** **

N CdFMRP

50 aa NLS KH1 NES RGGKH2 *60s

i t tiPhDPPiD

* *** **** * *N CdFMRP

1 113 - 154 224 - 270 290 - 335 426-434 470-499 681

interactionPPiD

32 truncations

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点突变对蛋白与蛋白互作的影响点突变对蛋白与蛋白互作的影响

Y t T H b id AMammalian:CYFIP, NUFIP, 82-FIP

Yeast Two-Hybrid Assay

Drosophila:CYFIP NUFIPCYFIP, NUFIP

** *** *** *

17 missenses, 8 AA *

***

** ***

* **N CdFMRP

50 aa NLS KH1 NES RGGKH260s

interactionPhDPPiD

* *1 113 - 154 224 - 270 290 - 335 426-434 470-499 681

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N terminal mutations disrupt specific protein-protein interactions

BD-NT218AD-CYFIP1

BDAD

BD AD

CYFIP1 FXR1 82-FIP

R48C (R47C) N N N

E66K (E68K) * N **

R48CA156T

BDAD-CYFIP1

ADBD-NT218

E66K (E68K) * N **

G78D (G80D) N N **

R113C (R115C) ** N **E66K

G78D

A156V

( )

R113H (R115H) * N **

A156T (A158T) N N N

R113C

S172F

L184H

A156V (A158V) N N N

S172F (S174F) ** N N

L184H (L186H) N ** NR113H G217E

L184H (L186H) N ** N

G217E (G220E) N N N

N t i i iti l f it i i f tiN terminus is critical for its in vivo functionReeve et al., J Neurosci, 2008

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多途径的突变体筛选多途径的突变体筛选

LOF: EMS化学筛选LOF: EMS化学筛选

染色体缺失筛选染 体缺失筛选

GOF: 共过表达筛选GOF: 共过表达筛选

LOF: loss-of-function; GOF: gain-of-function

To uncover FMRP pathway by characterizing suppressors

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Deficiency and Co-overexpression ScreenDeficiency and Co overexpression Screen

GMR promoter Gal4 dfmr1UAS

Gal4

promoter f

Eye specific Gal4

suppress hsuppress enhance

dfmr1 OE dfmr1 OE/Gene Ydfmr1 OE/Gene X

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Candidate Modifiers Were Identified 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20

XX

21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 402L

B tC t 32E2G t2

2R41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60

Brat37C1-6

Cmet 32E2Cana 32E2

Got222B8

Suppressor Enhancer Weak enhancerWeak suppressor No effect

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已得到10个侯选互作基因已得到10个侯选互作基因

基因 染色体 定位 分子功能

Glutamate oxaloacetate 2 22B8 aspartate transaminase activitytransaminase 2

CENP-meta 2 32E2 microtubule motor activity, structural constituent of cytoskeletony

CENP-ana 2 32E2 microtubule motor activity

Brain tumor 2 37C1-C6 protein binding, translation suppressor

Boule 3 66F5 mRNA binding

Rm62 3 83D1-D2 mRNA binding, RNA helicase activity

Adenylate kinase 1 3 69A2 adenylate kinase activityAdenylate kinase-1 3 69A2 adenylate kinase activity

NPFR1 3 83D5-E1 neuropeptide factor receptor 1

CG11843 3 98F6 unknown

CG4484 3 67A3 unknown

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brat mutants suppress dfmr1OE rough eyepp f g y

Wild Type dfmr1 OE;Df(2L)pr-A16dfmr1 OE Df(2L)pr-A16

dfmr1 OE;dfmr1 OE; brat11dfmr1 OE; brat1

UAS-brat1Adfmr1 OE; brat11dfmr1 OE; brat1

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Tumor Suppressor and Transla. RepressorWT Brat

A polarity protein

B tBrat

A polarity protein as Dlg, Lgl, Scrib etc.

Brat

?Brat

?

Br

at?

BratPumNos

FMRP?

5’ 3’

dMyc

5’ 3’

Hunchback

Asymmetric division Embryo development

Ectopic neuroblast: Misexpression of Hb:Ectopic neuroblast:

brain tumor

Misexpression of Hb:

fewer segment

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Brat controls bouton buddingWT dfmr150M brat150/brat192Syt

brat mutants have more numerous, clustered boutons with smaller bouton size

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Smaller and clustered boutons in brat mutants SSR

1

SS

AZ2

33

AZ AZ

Wei Xie from Southeast Uni.

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Abnormal synapse transmissionWT EJP mEJPA

5mV

brat11/brat192

200ms

500ms

1mV

B

WT brat11/brat192

V) V) z)

WT brat /brat

**C D E F

mpl

itude

(mV

mpl

itude

(m

requ

ency

(H

tal C

onte

nt **

EJP

Am

mEJ

P A

mEJ

P Fr

Qua

nt

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brat interacts with dfmr1 genetically at NMJ synapses

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FMRP interacts with Brat biochemicallyFMRP interacts with Brat biochemically

In vivo Co IP In vitro pull down Fig 4In vivo Co-IP In vitro pull-down Fig. 4

anti-GFPti dFMRP

ti GFP

anti-dFMRP

anti-GFP

许执恒组

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Brat colocalizes with dFMRP

*

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Brat and dFMRP interact genetically and biochemicallyBrat and dFMRP interact genetically and biochemically

Wh t i th f th i t ti ?What is the consequence of the interaction?

dFMRP

Futsch/MAP1B

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brat and futsch acts antagonistically at synapsesg y y p

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Brat suppresses Futsch/MAP1B expressionC

D

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Working Model

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FMRP

I t t ith MT S i P t i S ti dInteracts with MT Severing Protein Spastin and

Regulates Microtubule Network FormationRegulates Microtubule Network Formation

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spastin mutants suppress the dfmr1i h overexpression rough eye

WT dfmr1OE

dfmr1OE;UAS‐spastindfmr1OE;spastin dfmr1OE;spastin‐RNAi

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Genetic interaction between dfmr1 and spastin at NMJ

10 μm

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Tubulin Poly. MT

Spastin

a tubulin severing protein

Hereditary Spastic ParaplegiaHereditary Spastic Paraplegia遗传性痉挛性截瘫

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Microtubule network disrupted in dfmr1 mutants

dfmr1WT dfmr1OE

湖北大学金珊

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Disrupted MT network when dfmr1 expression is altered

acetylated tubulin

湖北大学金珊

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Tubulin expression is altered in dfmr1 mutants

α-tubulin

Total Soluble Precipitated

α-tubulinactin

WT dfmr1 dfmr1 OE

WT dfmr1 dfmr1 OE

acetylated-tubulin

WT dfmr1 dfmr1 OE

actin

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dfmr1 interacts with spastin

dfmr1, spastin mutants have similar synapse phenotypep y p p yp

D bl t t h h d h tDouble mutants have enhanced synapse phenotypes

spastin mutants rescue dfmr1 OE phenotypes

dfmr1 regulates MT network formation

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Tubulin Poly MTTubulin Poly. MT

Spastin Futsch/MAP1B

pdFMRP + Brat

Fragile X syndrome

Hereditary Spastic Paraplegia

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总结总结

以传统的模式动物果蝇为材料,通过突变

体的筛选和鉴定,利用多学科的试验手段

揭示FMRP在神经突触的功能,从而阐明脆

性X的发病机制,最终为治疗脆性X智力低下

提供理论指导

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ACKNOWLEDGEMENTSACKNOWLEDGEMENTS

林欣大爱

陈严林欣大

姚爱玉

金珊

东南大学谢维博士;遗传发育所许执恒博士

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项目资助:项目资助:

中国科学院(重要方向性项目)

国家基金委(重点、杰青)

科技部(863,973)

美国脆性X研究基金会美 究