RRocha - Overview of Clinical Data Standards - Apr 2016 · Overview'of'Clinical'Data' Standards'...

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Overview of Clinical Data Standards Roberto A. Rocha, MD, PhD, FACMI Clinical Informa9cs Director, Partners eCare, Partners Healthcare System Assistant Professor of Medicine Division of General Internal Medicine and Primary Care, Department of Medicine, Brigham and Women’s Hospital, Harvard Medical School Big Data in Healthcare: The Impact on Healthcare Quality, Cost and Access in China = April 18=19, 2016 =

Transcript of RRocha - Overview of Clinical Data Standards - Apr 2016 · Overview'of'Clinical'Data' Standards'...

Page 1: RRocha - Overview of Clinical Data Standards - Apr 2016 · Overview'of'Clinical'Data' Standards' Roberto'A.'Rocha,'MD,'PhD,'FACMI' Clinical'Informa9cs'Director,' Partners'eCare,'Partners'Healthcare'System'

Overview'of'Clinical'Data'Standards'

Roberto'A.'Rocha,'MD,'PhD,'FACMI'

Clinical'Informa9cs'Director,'

Partners'eCare,'Partners'Healthcare'System'

Assistant'Professor'of'Medicine'

Division'of'General'Internal'Medicine'and'Primary'Care,'Department'of'

Medicine,'Brigham'and'Women’s'Hospital,'Harvard'Medical'School'

Big%Data%in%Healthcare:%The%Impact%on%Healthcare%Quality,%Cost%and%Access%in%China%=%April%18=19,%2016%=%%

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Overview'

• Background'– Data'representa9on,'knowledge'exchange'

• Clinical'data'representa9on'– Terminologies,'Documents,'Informa9on'models'

• Clinical'knowledge'exchange'– InfobuMons,'Order'Sets,'CDS'Services'

• Conclusions'– Opportuni9es,'forms'of'par9cipa9on'

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Data'&'Knowledge'interoperability'

Home%

Ambulatory%Visit%

Hospital%

Procedure%

Rehabilita7on%

Phase%

Data%+%Knowledge%

Data%+%Knowledge%Data%+%Knowledge%

Data%+%Knowledge%

Interoperability%

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Definitions'(1/2)'

• Standard%O'“A'document,'established'by'

consensus%and'approved'by'a'recognized%body,'which'provides'rules,'guidelines,'or'characteris9cs'for'ac9vi9es”'

J.H. van Bemmel & M.A. Musen - Handbook of Medical Informatics

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Definitions'(2/2)'

• Interoperability%O'“The'ability'of'two'or'more'

systems'or'components'to'exchange%informa9on'and'to'use%the'informa9on'that'

has'been'exchanged.”'

IEEE Standard Computer Dictionary: A Compilation of IEEE Standard Computer Glossaries. Institute of Electrical and Electronics Engineers, 1990.

Page 6: RRocha - Overview of Clinical Data Standards - Apr 2016 · Overview'of'Clinical'Data' Standards' Roberto'A.'Rocha,'MD,'PhD,'FACMI' Clinical'Informa9cs'Director,' Partners'eCare,'Partners'Healthcare'System'

Development'of'standards'

• SDO:'Standards'Developing'Organiza9on'• Many'na9onal'and'interna9onal'organiza9ons'

– Interdependencies'and'overlapping'efforts'• Several'with'specific'focus'on'Healthcare'

– Examples:'HL7,'IHE,'DICOM,'CDISC,'…''

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CLINICAL'DATA'REPRESENTATION'

Page 8: RRocha - Overview of Clinical Data Standards - Apr 2016 · Overview'of'Clinical'Data' Standards' Roberto'A.'Rocha,'MD,'PhD,'FACMI' Clinical'Informa9cs'Director,' Partners'eCare,'Partners'Healthcare'System'

Clinical'data'representation'(4/18)'

• Define'“data%points”'(elements%and'values)'using'available'standards'

• Define'logical'models%that'combine'data%points%and'provide'meaningful'clinical'

informa7on%

• Obtain'detailed'provenance%to'understand'how%and'when%data'was'acquired,'and'also'who%provided'the'data'

• Represent'seman7c%and'temporal%linkages%between'data'instances''

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Clinical'data:'standards'

•  Data'elements'and'data'values'

– Available:'reference'terminologies'and'ontologies'

•  Informa9on'models'

– Work'in'progress:'isolated'efforts'and'collec9ons'

– Available:'clinical'documents'(mul9ple'types)'

•  Provenance'models'

– Work'in'progress:'compe9ng'models'

•  Seman9c'and'temporal'linkages'

–  Preliminary'work'

AddiDonal%work%is%needed%!%opportuniDes%

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LOINC'

•  Logical%Observa7on%Iden7fiers%Names%and%Codes%

• Organiza9on:'LOINC'CommiMee'

•  Purpose:'iden9fica9on'of'laboratory'and'clinical'observa9ons'(HL7'messages)'

•  Content:'laboratory'tests,'clinical'measurements,'

documents,'etc.'

•  Informa9on:'

–  hMp://loinc.org''

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hMps://search.loinc.org''

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SNOMED'CT'

•  Systema7zed%Nomenclature%of%Medicine%–%Clinical%Terms%

•  OrganizaDon:'Interna9onal'Health'Terminology'Standards'

Development'Organisa9on'(IHTSDO)'–  SNOMED'Terminology'Solu9ons'O'College'of'American'Pathologists'

•  Purpose:'Encoding'of'mul9ple'clinical'domains'

•  Content:'Comprehensive'(diseases,'signs,'symptoms,'living'

organisms,'chemicals,'body'parts,'morphology,'occupa9ons,'

modifiers,'etc.)'

•  Informa9on:''

–  hMp://www.ihtsdo.org''

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hMp://browser.ihtsdotools.org'

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Many'others'(incomplete'list)'

•  RxNorm:'clinical'drugs'and'drug'delivery'devices'(NLM)'

hMps://www.nlm.nih.gov/research/umls/rxnorm/''

•  NDFNRT:'Na9onal'Drug'File'O'Reference'Terminology'(VA)'

hMp://evs.nci.nih.gov/`p1/NDFORT/'''

•  IIS:'Vaccina9on'code'sets'(CDC)'hMp://www.cdc.gov/vaccines/programs/iis/codeOsets.html'''

•  HL7%Vocabulary%domains'(messaging,'documents,'services)'

hMp://www.hl7.org/documentcenter/public_temp_1A973D1BO1C23O

BA17O0CCBD68843B23790/standards/vocabulary/vocabulary_tables/infrastructure/

vocabulary/vocabulary.html''

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Document'standards'

•  Clinical%Document%Architecture%(CDA)%

•  Organiza9on:'HL7'Interna9onal'•  Purpose:'document'markup'standard'that'specifies'the'

structure%and'seman7cs%of'"clinical'documents"'for'the'

purpose'of'exchange'between'healthcare'providers'and'

pa9ents'

•  Content:'–  Con9nuity'of'care,'procedure'note,'pa9ent'assessments,'etc.'

–  Clinical'oncology'treatment'plan,'PHR'plans,'gene9c'tes9ng'reports,'

public'cancer'registries,'etc.''

–  Data'Provenance'•  Informa9on:'

–  hMp://www.hl7.org/implement/standards/product_brief.cfm?product_id=7'''

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Information'models'

•  Clinical%Informa7on%Modeling%Ini7a7ve%(CIMI)%

•  Organiza9on:'HL7'Interna9onal'•  Purpose:'Improve'the'interoperability'of'healthcare'systems'

through'shared'implementable'clinical'informa9on'models'O'a'

single%curated%collec7on%with'bindings'to'reference'terminologies%

•  Content:'laboratory'test'results,'vital'signs,'diagnoses,'procedures,'pa9ent'measures,'etc.'

•  Informa9on:'

–  hMp://www.hl7.org/Special/CommiMees/cimi/index.cfm'

–  hMp://www.opencimi.org''

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CLINICAL'KNOWLEDGE'EXCHANGE'

Page 18: RRocha - Overview of Clinical Data Standards - Apr 2016 · Overview'of'Clinical'Data' Standards' Roberto'A.'Rocha,'MD,'PhD,'FACMI' Clinical'Informa9cs'Director,' Partners'eCare,'Partners'Healthcare'System'

Implementation'of'CDS'modalities%

CDS'modality% Types'of'Knowledge'Assets%

1.'Information'selection'and'

retrieval'Reference'

2.'Information'aggregation'and'

presentation' Actionable'

3.'Data'entry'assistance'

4.'Event'monitors'

Executable'

5.'Care'workflow'assistance'

6.'Descriptive'or'predictive'modeling'

Cost'

Ava

ilability'

Complex

ity'

Maint

aina

bility'

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StandardsTbased'implementations?'CDS'modality% Relevant'Interoperability'Standards'

(data'&'knowledge'representation'and'exchange)'

1.'Information'selection'and'

retrieval'

Guideline%Elements%Model%(GEM):'ASTM'

ContextNaware%Info%Retrieval%(InfobuMon):'HL7'Structured%Product%Label'(medica9ons):%HL7'

2.'Information'aggregation'and'

presentation'Clinical%Document%Architecture%(CDA):'HL7'

Health'Quality'Measures'Format'(eMeasures):'HL7'

Order'sets:'HL7'3.'Data'entry'assistance'

4.'Event'monitors'

Arden%Syntax%for%Medical%Logic%Systems:'HL7'GELLO%N%A%Common%Expression%Language:'HL7'

Decision'Support'Services:'HL7'

Virtual'Medical'Record'(vMR):'HL7'

5.'Care'workflow'assistance'

6.'Descriptive'or'predictive'modeling'

Kawamoto K, Del Fiol G, Lobach DF, Jenders RA. Standards for scalable clinical decision support: need, current and emerging standards, gaps, and proposal for progress.

Open Med Inform J. 2010;4:235-44.

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Problem'List'infobuttons'

Informa9on'about'

“Depression”'

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HL7'Infobutton'standard'Del'Fiol'G,'Huser'V,'Strasberg'HR,'

Maviglia'SM,'Cur9s'C,'Cimino'JJ.'

Implementa9ons'of'the'HL7'ContextO

Aware'Knowledge'Retrieval'

("InfobuMon")'Standard:'Challenges,'

strengths,'limita9ons,'and'uptake.'J%Biomed%Inform.'2012'Jan'2.'

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Integration'across'repositories'

•  Common%Terminology%Services%–%Release%2%(CTS2)%

•  Organiza9on:''HL7'+'Object'Management'Group'(OMG)'

•  Purpose:'standardized'interface'for'the'use'and'management'

of'terminologies'(extensible'to'knowledge'assets)%

•  Content:'concepts,'value'sets,'code'systems,'en99es,'

informa9on'models,'APIs,'etc.'

•  Informa9on:'

–  hMp://www.hl7.org/implement/standards/product_brief.cfm?product_id=384'

–  hMp://www.omg.org/spec/CTS2/'

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Content%Sources%(e.g.,%EHR%content,%Open%source%content,%Licensed%content,%etc.)%

IMPORT%(XML%format%compa7ble%with%available%standards%–%e.g.,%CTS2)%%

Content%Consumers%(e.g.,%Clinical%applica7ons%and%services,%EHR%systems,%etc.)%%

Publication

Authoring

Linking Validation

Review & Vetting

ETL%

CKMS%

EXPORT%(same%XML%format%used%for%Import)%%

ETL%

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CONCLUSIONS'

Page 25: RRocha - Overview of Clinical Data Standards - Apr 2016 · Overview'of'Clinical'Data' Standards' Roberto'A.'Rocha,'MD,'PhD,'FACMI' Clinical'Informa9cs'Director,' Partners'eCare,'Partners'Healthcare'System'

Known'challenges'with'standards'

• Widespread%use%of'the'standard'– Measurement'of'acceptance%(success)'–  Implementa9on'costs%versus'benefits%obtained'

•  Standards'usually'define'a'nonNprescrip7ve%model'

–  Formal'document,'precise'defini9ons,'wellOdefined'

problems'(scenarios)'

–  Conformance,'variability,'evolu7on%

•  High'degree'of'complexity%and'dynamism%– Wide'spectrum'of'scenarios'and'approaches'

–  Con9nuous'evolu7on%(dynamic):'domain'+'technology'

–  Extensive'(cumbersome)'documenta9on'

Page 26: RRocha - Overview of Clinical Data Standards - Apr 2016 · Overview'of'Clinical'Data' Standards' Roberto'A.'Rocha,'MD,'PhD,'FACMI' Clinical'Informa9cs'Director,' Partners'eCare,'Partners'Healthcare'System'

Participate!'

•  Most'SDOs'welcome'open'and'broad%par9cipa9on'–  Healthcare'providers,'government'stakeholders,'payers,'

pharmaceu9cal'companies,'system'vendors,'consultants'

•  Understand'the'scope'and'applicability'of'exis9ng'standards'–  Gain'access%to'available'standards'–  Decide'how'each'standard'applies%to'your'organiza9on'

•  Contribute'to'and'influence'the'development'of'standards'

–  Bring'your'specific%needs%and'discuss'implementa9on'op9ons'

–  Seek'informa9on'from'other'stakeholders'to'make'informed%decisions%

•  Achieve'industry'leadership'by'demonstra9ng'interoperability'

–  Learn'about'industry'best%prac7ces%–  Understand'implementa9on'7meline%and'costs%

–  Improve'the'quality%and'sustainability%of'your'local'systems'

Page 27: RRocha - Overview of Clinical Data Standards - Apr 2016 · Overview'of'Clinical'Data' Standards' Roberto'A.'Rocha,'MD,'PhD,'FACMI' Clinical'Informa9cs'Director,' Partners'eCare,'Partners'Healthcare'System'

Acknowledgements%

Perry'Mar'

Sarah'Collins'

David'Dubois'

Ben'Gross'

Saverio'Maviglia'

Beatriz'Rocha'

Other'members'of'the'Clinical%Informa7cs%Team%at'Partners'

Stanley'Huff'

Members'of'the'Modeling%and%Terminology%Teams%at'Intermountain'

Page 28: RRocha - Overview of Clinical Data Standards - Apr 2016 · Overview'of'Clinical'Data' Standards' Roberto'A.'Rocha,'MD,'PhD,'FACMI' Clinical'Informa9cs'Director,' Partners'eCare,'Partners'Healthcare'System'

Thank%you!%

Roberto A. Rocha, MD, [email protected]

http://scholar.harvard.edu/rarocha

This'work'by'Roberto'A.'Rocha'is'licensed'under'a'Crea9ve'Commons'AMribu9onO

NonCommercialOShareAlike'4.0'Interna9onal'License'