Ribonucleic acid synthesi ins embryonic chick muscle, rate of … · Ribosomal RNA obtained as a...

16
/. Embryol. exp. Morph. Vol. 56, pp. 253-267, 1980 253 Printed in Great Britain © Company of Biologists Limited 1980 Ribonucleic acid synthesis in embryonic chick muscle, rates of synthesis and half-lives of transfer and ribosomal RNA species By MARK NWAGWU 1 AND MOHAMMED NANA 2 From the Department of Biological Sciences, Brock University Ontario SUMMARY In this study the term 'rates of synthesis' does not refer to rates of transcription but to rates of accumulation of newly synthesized RNA. The rates of synthesis and half-lives of tRNA, 18S and 28S rRNA of 14-day and 17-day embryonic chick muscle were determined by following the accumulation of radioactive AMP in RNA after administration of [ 3 H]8-adenosine to chick embryos and correcting for the average specific activity of the precursor ATP pool. Transfer RNA of 14-day embryonic chick muscle is synthesized at a rate of 2-4 x 10 5 molecules per min per 2 N DNA content and decays with a half-life of 50 h. Transfer RNA of 17-day embryonic chick muscle is syn- thesized, and decays, at similar rates. Ribosomal RNA, 18S and 28S, are synthesized at a rate of 9-94 x 10 3 and 8-48 xlO 3 molecules per min per 2 N DNA, respectively, in 14-day embryonic chick muscle. The rates of rRNA syntheis in 17-day embryonic muscle are also similar. In both 14-day and 17-day embryonic muscle, 18S and 28S rRNA each decays with a half-life of 65 h. We conclude that the constant level of tRNA and rRNA in embryonic chick muscle from 14 to 17 days (Nwagwu & Nana, 1974) is maintained also by a constant rate of synthesis and turnover. INTRODUCTION The ribosome, polyribosome and transfer RNA contents of embryonic chick muscle do not change significantly during development from 11 to 17 days (Nwagwu & Nana, 1974). A number of mechanisms could regulate their amounts including the rate of RNA transcription (Emerson, 1971; Weber, 1972), the rate of degradation of primary transcriptional products during pro- cessing to tRNA, 18S and 28S rRNA (Cooper, 1973; Bowman & Emerson, 1977) and RNA turnover (Emerson, 1971; Weber, 1972; Bowman & Emerson, 1977). Previous attempts have been made to study RNA synthesis in developing 1 Author's present address: Department of Zoology, University of Ibadan, Ibadan, Nigeria. 2 Author's address: Department of Biological Sciences, Brock University, St. Catharines, Ontario, Canada L25 3A1. 17 EMB 56

Transcript of Ribonucleic acid synthesi ins embryonic chick muscle, rate of … · Ribosomal RNA obtained as a...

Page 1: Ribonucleic acid synthesi ins embryonic chick muscle, rate of … · Ribosomal RNA obtained as a precipitate by the above procedure, was pelleted by centrifugation at 10000 g for

/ . Embryol. exp. Morph. Vol. 56, pp. 253-267, 1980 2 5 3Printed in Great Britain © Company of Biologists Limited 1980

Ribonucleic acid synthesis inembryonic chick muscle, rates of synthesis and

half-lives of transfer and ribosomal RNAspecies

By MARK NWAGWU1 AND MOHAMMED NANA2

From the Department of Biological Sciences, Brock UniversityOntario

SUMMARY

In this study the term 'rates of synthesis' does not refer to rates of transcription but to ratesof accumulation of newly synthesized RNA.

The rates of synthesis and half-lives of tRNA, 18S and 28S rRNA of 14-day and 17-dayembryonic chick muscle were determined by following the accumulation of radioactive AMPin RNA after administration of [3H]8-adenosine to chick embryos and correcting for theaverage specific activity of the precursor ATP pool. Transfer RNA of 14-day embryonicchick muscle is synthesized at a rate of 2-4 x 105 molecules per min per 2 N DNA content anddecays with a half-life of 50 h. Transfer RNA of 17-day embryonic chick muscle is syn-thesized, and decays, at similar rates. Ribosomal RNA, 18S and 28S, are synthesized at arate of 9-94 x 103 and 8-48 xlO3 molecules per min per 2 N DNA, respectively, in 14-dayembryonic chick muscle. The rates of rRNA syntheis in 17-day embryonic muscle are alsosimilar. In both 14-day and 17-day embryonic muscle, 18S and 28S rRNA each decays with ahalf-life of 65 h. We conclude that the constant level of tRNA and rRNA in embryonicchick muscle from 14 to 17 days (Nwagwu & Nana, 1974) is maintained also by a constantrate of synthesis and turnover.

INTRODUCTION

The ribosome, polyribosome and transfer RNA contents of embryonic chickmuscle do not change significantly during development from 11 to 17 days(Nwagwu & Nana, 1974). A number of mechanisms could regulate their amountsincluding the rate of RNA transcription (Emerson, 1971; Weber, 1972),the rate of degradation of primary transcriptional products during pro-cessing to tRNA, 18S and 28S rRNA (Cooper, 1973; Bowman & Emerson,1977) and RNA turnover (Emerson, 1971; Weber, 1972; Bowman & Emerson,1977).

Previous attempts have been made to study RNA synthesis in developing1 Author's present address: Department of Zoology, University of Ibadan, Ibadan,

Nigeria.2 Author's address: Department of Biological Sciences, Brock University, St. Catharines,

Ontario, Canada L25 3A1.17 EMB 56

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254 M. NWAGWU AND M. NANA

chick muscle, in vivo. It has been shown that rRNA synthesis is high at 11 days,low at 14 days and high once again in 18-day-old chick embryonic muscle(Herrmann, Hey wood & Marchok, 1970). Nwagwu & Engemann (1979) haveshown that the patterns of rRNA synthesis in muscle from the 14th to the 15thand from the 17th to the 18th day of chick development are similar, suggestingthat the ribosome content during this period may be transcriptionally regulated.

In other studies of muscle cells in culture, it has been shown that ribosomeaccumulation ceases after cell fusion (Hosick & Strohman, 1971). Also adecrease in the incorporation of radioactive precursors after myoblast fusionhas been reported (Marchock, 1966; Coleman & Coleman, 1968; Man & Cole1972). These reports, however, have not followed any changes in the ribosomecontent of myofibres long after fusion has occurred. In another work, Heywood& Nwagwu (1969) showed that the incorporation of 32P into rRNA of myosin-synthesizing polyribosomes of 14-day embryonic chick muscle was considerablyless than the incorporation into polysomal RNA.

Nwagwu & Onishchuk (1979) have shown that the patterns of tRNA syn-thesis during embryonic muscle development from the 14th day to 15th dayand from the 17th day to 18th day were similar. Therefore it would seem that thetRNA content was regulated by transcriptional mechanisms.

The specific activity of the precursor pool which supplies nucleotides forRNA synthesis was not determined in any of the above studies. It has thereforebeen difficult to obtain a clear picture of RNA synthesis in developing chickmuscle.

In this study we have followed the pattern of accumulation of AMP inrRNA and tRNA and have thereby determined the pattern of accumulation ofnewly synthesized RNA, after correcting for the specific activity of the precursorATP pool. The results show that the rates of synthesis of 18S and 28S rRNA of14-day embryonic chick muscle are similar to those of the correspondingrRNA of 17-day embryonic chick muscle; the half-life of rRNA is 65 h. Sincethe amounts of ribosomes of muscle of both embryonic ages are also similar(Nwagwu & Nana, 1974), we conclude that ribosome accumulation andturnover in embryonic chick muscle from the 14th day to 17th day do not change.

The results also show that the rates of tRNA synthesis in developing chickmuscle of 14-day and 17-day embryos are similar and that tRNA decays with ahalf-life of 50 h.

METHODSExtraction of ATP

Five 14-day chick embryos or four 17-day ones were each injected with 0-08ml of [3H]adenosine via one of the major chorioallantoic veins and incubatedat 37 °C for varying lengths of time. At the appropriate time, leg skeletalmuscle (2-5 g) was dissected out quickly to minimize ATP degradation (seeMandel, 1964).

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RNA synthesis in embryonic chick muscle 255

The muscle was homogenized in 3 vols of cold (0 °C) 70% ethanol/1 %potassium citrate, pH 6-8 (v/v) (Mandel, 1964) with 20 strokes of a loose-fitting Dounce homogenizer. Prior to use, the ethanol/potassium citrate mixturewas stored at — 20 °C for at least 12 h. Potassium citrate was included toinhibit the conversion of ADP to ATP during the extraction steps (Seraidarian,Moinments & Wallner, 1962). The homogenate was centrifuged at 18000 rev/min in the IEC Model B20 centrifuge with a type 870 rotor for 20 min at 0 °C.The supernatant was approriately diluted with 70 % ethanol for further analysis.

Specific activity of ATP

The specific activity of ATP was determined as described by Emerson &Humphreys (197J).

Preparation of rRNA (for determination of optimal conditions for hydrolysis andfor estimation of [3H] exchange during hydrolysis) and tRNA

[3H]8-adenosine was injected into 14-day-old chick embryos via one of thechorioallantoic veins and the embryos were incubated for 6 h.

Leg muscle (2-5 g) was homogenised in RSB buffer (300 mM-NaCl - 10 mM-MgCl2 - 10 niM Tris-HCl, pH 7-0) with ten strokes of a loose-fitting Douncehomogenizer. The homogenate was centrifuged at 10000g for 10 min at 0 °C.

The resultant S-10 supernatant fraction was further centrifuged at 120000£for 2h at 0 °C in a Model B 60 IEC ultracentrifuge. Ribosomal RNA wasextracted from the pellet by the hot phenol-sodium dodecyl sulphate methoddescribed by Penman (1966) after resuspension of the pellet in 2-3 ml of NTESbuffer (40 mM Tris - HC1 (pH 7-8) - 2 mM EDTA - 100 mM-NaCl - 1 % (w/v)sodium dodecyl sulphate).

Transfer RNA was prepared from the S-120 supernatant fraction by themethod of Nwagwu & Nana (1974). Transfer RNA prepared in this manner,elutes as a single peak of 4S RNA following chromatography on SephadexG-75 column (Nwagwu & Hossain, 1975). Furthermore, the tRNA peakaccepts serine with high efficiency (Nwagwu & Hossain, 1975).

Hydrolysis of rRNA

Ribosomal RNA obtained as a precipitate by the above procedure, waspelleted by centrifugation at 10000 g for 10 min at 0 °C, resuspended in 3 ml of300 mM-NaOH and alkaline-soluble radioactivity determined by the method ofHumphreys (1973).

Hydrolysis of tRNA

Transfer RNA was resuspended in 1 ml of 300 mM-NaOH. A portion, 0-1 mlin duplicate, was removed for estimation of the total radioactivity of tRNA andcarrier adenosine (approx. 1 A260 unit) was added to the remaining portion(see Hecht, Zamecnik, Stephenson & Scott, 1958). Duplicate portions of the

17-2

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256 M. NWAGWU AND M. NANA

resuspension, 0-3 ml each and equivalent to 4-A-5 A260 units tRNA wereincubated at 80 °C for 60 min. Subsequent analyses were similar to thosedescribed by Humphreys (1973).

Determination of [3H] exchange

The tritium of adenine exchanges with water in base (Wilt, 1969). Thisexchange was measured as described by Humphreys (1973).

Preparation of radioactive 18S and 28S RNA

Chick embryos, 14 and 17 days old were each injected with [3H]adenosine(0-08 ml) and incubated for varying lengths of time. Ribosomal RNA wasprepared as described above and a portion, 0-4 ml (equivalent to 6-12 A26ounits) was layered on 27 ml or 15 % to 30 % (w/v) linear sucrose densitygradient prepared in NTES buffer and centrifuged at 24000 rev/min in IECultracentrifuge with a swinging-bucket rotor, type SB-110, for 18 h at 24 °C.After centrifugation, fractions, 1 ml each, were collected as the absorbance(A260 nm) was recorded with a Gilford Model 2400 spectrophotometer. Peakscorresponding to 18S and 28S rRNA were separately pooled and the RNAprecipitated with 2 vol of absolute ethanol at - 2 0 °C for 12-18 h.

Determination of the percentage of radioactive AMP in 18S and 28S rRNA

The RNA samples precipitated with ethanol as described above were re-covered by centrifugation at 17000g for 20 min at 0 °C. The pellets were re-suspended in 1 ml of 300 ml NaOH and incubated at 80 °C for 60 min. andnucleotides obtained as described by Humphreys (1973). The nucleotides weredissolved in 0-1 ml of 100 mM-NH40H. A portion, 20 [A, was spotted on PEIthin-layer cellulose plate which has been exhaustively irrigated with distilledwater. The plate was developed in 500 mM sodium formate, pH 3-4 for about4 h, dried in a fume hood for 2-4 h at 20 °C and the spots of AMP and GMPcorresponding to those of their respective standard markers were scraped intoseparate scintillation vials. The nucleotides were eluted with 0-5 ml of 1 M-HC1for 15 min. PCS: xylene (2:1, v/v) (10 ml) was added, the whole mixtureagitated for 4-6 h and the radioactivity determined. In subsequent experiments,the total radioactivity in rRNA (18S and 28S) and tRNA was determined andmultiplied by the appropriate percentage of the total radioactivity present inAMP (see Humphreys, 1973).

Determination of radioactivity

Radioactivity was determined in the presence of 10 ml of a scintillationmixture, PCS:xylene (2:1, v/v) with a Packard Tricarb liquid scintillationspectrometer, Model 3310, having a [3H]counting efficiency of 17%.

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RNA synthesis in embryonic chick muscle 257

Materials

Leg muscle of 14- and 17-day-old Dekalb 171 White Leghorn embryos wasused in this study. [3H]8-adenosine (20 /*Ci/m-mole) purchased from Schwarz-Mann, Orangeburg, New York, N.Y., was rid of alcohol and finally dissolved in0-9 % saline (v/v) to give a final specific activity of 19-3 /^Ci/mmole. Fireflyluciferase (Sigma FLE-250) and Dowex l-x-8 chloride from 200-400 meshsize were obtained from Sigma Chemical Co., Dekalb, No., U.S.A. Dowexl-x-8 formate was prepared from the chloride form by extensive washing with2 M formic acid until no more chloride ions were removed (at which point noprecipitate was formed with AgNO3). The resin was then thoroughly washedwith distilled water. Polyethleneimine (PEI) thin-layer cellulose plates werepurchased from Brinkmann Instruments, Toronto, Canada. Ribonuclease-free sucrose for density gradient centrifugation was purchased from Schwarz-Mann, Orangeburg, New York, N.Y. All chemicals were of analytical grade.PCS scintillant was purchased from Amersham-Searle, Toronto, Canada.

RESULTS

Incorporation of [3H]adenosine into nucleotides

Developing chick muscle was labelled with [3H]adenosine and the incorpora-tion of the radioisotope into adenine and guanine nucleotides over a timeinterval of 30 min to 12 h was measured. The results presented in Table 1 showthat ATP accounted for 64 % to 68 % of the total radioactivity of the ethanol-soluble fraction, while only 2-4-3% was recovered in adenosine. The radio-activities in all adenine nucleotides represent 83 % of the radioactivity of theethanol-soluble fraction. Thus 30 min after its introduction into muscle, a largepercentage of adenosine is converted to adenine nucleotides particularly ATP.Radioactivity recovered in guanine nucleotides accounted for 17 % of the radio-activity of the ethanol-soluble fraction. Thus a significant portion of the adeno-sine pool is interconverted to guanine nucleotides (see Hauschka, 1973).

Amount and specific activity of ATP in 13-day and 17-day embryonic chickmuscle

After correcting for the efficiency of ATP extraction and elution, the quan-tities of ATP in 1 g fresh weight of muscle of 14- and 17-day embryonic chickembryos were determined to be 222 and 299 nmole, respectively (Table 2). Thespecific activity of ATP increases rapidly up to the 60 min time point and thenreaches a plateau level. The specific activity of ATP from 14-day embryonicmuscle (2-5) is higher than that from 17-day embryonic muscle (2-0) by 25 % atthe plateau level of the graph.

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OO

Tab

le 1

. Am

ount

of

radi

oact

ivit

y in

the

etha

nol-

solu

ble f

ract

ion

and

the

perc

enta

ge o

f th

is r

adio

acti

vity

rec

over

ed in

AT

P,

AM

P,

AD

P/d

AT

P,

aden

osin

e, t

otal

ade

nine

nuc

leot

ides

and

tota

l gua

nine

nuc

leot

ides

(The

dat

a ar

e ex

pres

sed

as m

eans

± S

.E. T

he s

ampl

e si

ze i

s in

par

enth

eses

.)

Tim

e(m

in)

30 60 180

360

720

Eth

ano

l-so

lubl

efr

acti

on(d

pm)

6966

20±

70

28

2(4

)

7747

16±

55

19

9(4

)

7481

88±

30

35

4(4

)

7583

65±

46

99

8(4

)

5061

91±

42

86

0(4

)

Rad

ioac

tivi

ty o

f et

hano

l-so

lubl

e fr

acti

on

AT

P

64-5

±1

-5 (

4)

67

-4±

l-2

(4)

68 0

±0

-5 (

4)

66-2

±1-

8 (4

)

67

1+

11

(4)

AD

P/d

AT

P*

7-7

±0

-6 (

4)

6-7

±0

-3 (

4)

6-8

±0

-4 (

4)

6-7

±0-

3 (4

)

70

±0

4 (4

)

AM

P

5-8

±0

-8 (

4)

5-9

±0

-2 (

4)

5-5

±0

1 (4

)

5-5

±0

-5 (

4)

6-0

±0

-2 (

4)

reco

vere

d in

nucl

eoti

des

(%)

Ade

nosi

ne

3O±

0-26

2-8

±0-

5

2-8

±0-

4

2-8

±0-

5

2-4

±0-

4

(4)

(4)

(4)

(4)

(4)

Tot

alad

enin

eN

ucle

o-ti

des

81

0

82-8

83

1

81-2

82-5

Tot

algu

anin

eN

ucle

o-ti

des

19-3

17-2

17 18-8

17-5

M. NWA O c d Z

[3 H] A

deno

sine

(0

08

ml;

1-9

5 x

108 d

.p.m

.) w

as i

njec

ted

into

14-

day

chic

k em

bryo

s an

d, a

t th

e ap

prop

riat

e ti

me,

the

am

ount

of

radi

oact

ivit

yin

tot

al m

uscl

e h

om

og

enat

e, t

he e

than

ol-s

olub

le f

ract

ion,

AT

P,

AD

P/d

AT

P a

deno

sine

and

gua

nine

nuc

leot

ides

was

det

erm

ined

as

desc

ribe

du

nd

er '

Met

ho

ds'

sec

tion

. T

he

amo

un

t of

rad

ioac

tive

AT

P w

as 1

2-2

nmol

e at

the

60

min

tim

e po

int

and

rem

aine

d at

thi

s le

vel

for

12 h

. R

esul

tsob

tain

ed w

ith

17-d

ay e

mbr

yoni

c m

uscl

e w

ere

sim

ilar

to

thos

e pr

esen

ted

and

are

ther

efor

e om

itte

d.*

AD

P a

nd d

AT

P d

id n

ot c

hro

mat

og

rap

h di

stin

ctly

fro

m e

ach

othe

r an

d w

ere

ther

efor

e po

oled

tog

ethe

r.

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RNA synthesis in embryonic chick muscle 259

Table 2. The content and specific activity of ATP of 14-day and 17-day embryonicchick leg muscle

(The data are expressed as mean±s.E./g fresh weight of muscle. The sample size is inparentheses.)

Specificactivity*

(dpm/pmoleDay ATP(nmol/g) ATP)

14 222 ±13 (42) 2-517 299±10(42) 2

Muscle (2-5 g) was homogenized in 5 ml of 70% ethanol/1 % potassium citrate, pH 6-8,and ATP was separated and quantified as described under 'Methods'.

A m o u n t o f A T P - r x M x 1 0 0

86-5 70-71'where y is the amount of ATP determined, without making any corrections for the efficienciesof extraction and of elution of ATP; 100/86-5 is the correction factor for the efficiency ofATP extraction (70% ethanol - 1 % potassium citrate, pH 6-8, extracted 86-5% of totalmuscle ATP); 100/70-71 is the correction factor for the efficiency of ATP elution with 40 ITIMglycyl-glycine HC1 buffer pH 7-41).

* The specific activity of ATP reaches a maximum after 60 min and remains at this levelfor .12 h.

Incorporation of [sH]adenosine into AMP in rRNA

Approximately 51 % and 20 % of the radioactivity of rRNA are representedby AMP and ATP respectively, for all the time-points studied. Radioactivityin adenine nucleotides thus comprises 71% of the total radioactivity of rRNA.Of the total radioactivity in tRNA 21-27 % is represented by AMP while GMPaccounts for approximately 29 %.

Accumulation of AMP in rRNA and tRNA

As shown in Fig. 1, AMP rapidly accumulates in both 18S and 28S rRNA of14- and 17-day embryonic muscle within 1 h of introduction of radioactiveadenosine. The time it takes for the specific activity of AMP to reach a constantlevel would be the time it takes to replace all old, unlabelled rRNA moleculeswith new, radioactive ones. However, for practical reasons, AMP accumulationin RNA was followed for only 12 h by which time only a small fraction of totalRNA has been labelled. This limitation raises a major problem in workingwith developing systems in vivo; for if we continued labelling for much longerperiods, for example 24-48 h, then we would no longer be studying 14-dayembryonic muscle. Furthermore, the embryos do not survive prolongedincubation following administration of 0-08 ml of radioisotope. We have there-fore made the following assumptions:

(a) the kinetics of synthesis and decay of radioactively labelled RNA aresimilar to those of total RNA;

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260 M. NWAGWU AND M. NANA

15

10

605S.

120 240 360 480

Time (min)

600 720

Fig. 1. Time course of accumulation of 28S rRNA ( • • ) ; tRNA (A—A)and 18S rRNA (O—O) of 14-day embryonic chick muscle. The values given rep-resent net accumulation, that is, the difference between synthesis and degradationof RNA molecules. Developing chick embryos, 14 and 17 days old, were injectedwith [3H]adenosine (008 ml) and incubated for varying lengths of time. At theappropriate time, leg muscle (2-5 g) was dissected out and tRNA and rRNA wereextracted and analyzed as described in the' Methods' section. The 18S and 28S rRNApeaks were separately pooled and the RNA precipitated with two volumes ofabsolute ethanol at -20 °C for 12-18 h. The amount of RNA (in A268 units) wasdetermined and the RNA hydrolyzed. AMP was isolated by thin-layer cellulosechromatography and its radioactivity converted to moles of AMP, after correctingfor [3H]exchange during hydrolysis and the average specific activity of the ATP pool.The quantity of AMP expressed in picomoles was converted to micrograms of RNAas follows:

jug of tRNA = pmole AMP x —— x 330 x 106;

/tgof 18SrRNA = pmole A M P x ^ x 330x 106;

100p% of 28S rRNA = pmole A M P x — x 330 x 10°;

18'5

given that (a) 18-3% of all nucleotides in tRNA is represented by AMP (Zachau,1972; Sodd & Doctor, 1974); (b) 24% and 18-5% of all nucleotides in 18S rRNAand 28S rRNA, respectively, are represented by AMP (Lerner, Bell & Darnell,1963; Loening, 1968) and (c) the average molecular weight of a nucleotide is 330daltons. The 2 N DNA contents of 14- and 17-day embryonic chick muscle areestimated as 21 and 2-5 mg/g fresh weight of muscle, respectively, from the data ofFig. 2 and table 3 of Herrmann et al. (1970). As the results for 17-day RNA aresimilar to those presented, they have been omitted.

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RNA synthesis in embryonic chick muscle 261

100908070

100QO8070

s—o

1

l r—

1 1

(.a)m

«

(b)

o

1 1 1

120 240 360 480

Time (min)

600 720

Fig. 2. Standard decay analysis of tRNA (a) and .18S rRNA (6) of 14-day embryonicchick muscle. The logarithm of the percentage of the total RNA remaining unlabel-led is plotted against time. If an equilibrium exists and the rate of RNA synthesisequals its rate of degradation, then the accumulation curves of Fig. 1 would be theinverse of the decay curve of non-radioactive RNA molecules beginning from thetime when the radioisotope was administered. The percentages of the steady-state levelof RNA (Cog) synthesized at the different times given in Fig. 1 were calculated andthe percentages of non-radioactive RNA obtained by difference. The graphs wereplotted as described by Brandhorst & Humphreys (1971) and Humphreys (1973).The graphs for 28S and 18S rRNA are superposable. The graphs for 17-day RNAare also omitted as they are similar to those of 14-day RNA.

(b) radioactively labelled RNA does not represent a pool of RNA havingunique properties;

(c) the first-order decay plot of RNA during the labelling period of 12 h(Fig. 2) is similar to the decay plot of RNA during the period required to reachsteady-state; extrapolation of the decay graph to intersect the abscissa is a truereflection of the decay graph of RNA.

Synthesis and accumulation of tRNA, 18S and 28S rRNA

The steady-state levels of tRNA, 18S and 28S rRNA of 14-day embryonicmuscle determined chemically are, respectively, 1-1 x 109,5-62 x 107 and 4-79 x 107

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262 M. N W A G W U AND M. NANA

Table 3. Steady-stdte amounts (Coo), rates of synthesis and decay and half-lives oftRNA, 18 S and 28S rRNA of 14- and 17-day embryonic chick muscle

Day tRNA 18SrRNA 28S rRNA

datax 10-8/2N DNA) from chemical 14

17

1417

1417

1417

14171417

1417

45-7144-29

10-99 x 108

8-9 xlO8

l-44xlO9

1-18 xlO9

105 xlO-8

0-86 xlO-8

2-4 xlO5

1-97 xlO5

2-3 x io-4

2-3 x lO"4

50 h50 h

65-666213

5-62 xlO7

5-34 xlO7

7-75 xlO7

7-36 xlO7

1-16 xlO-8

1-lxlO"8

9-94 x 103

9-44 x 103

1-77x10-41-77 xlO-4

65 h65 h

127-6911402

4-79 xlO7

4-26 x 107

6-61 xlO7

5-89 xlO7

2-26 x 10-8

2-20 xlO-8

8-48 x 103

7-55 xlO3

1-77 x 1O-*1-77 xlO-4

65 h65 h

Cooa* (Number of molecules per 2 N DNAfrom chemical data)

Cm6* (number of molecules per 2 N DNA,from incorporation data)

Rate of synthesis {Ks)c (jigfmixr1 per

2 N DNA)

Rate of synthesis (Ks)c* (number of

molecules/min/2 N DNA)Rate of decay (Kd)

d (min-1)

Half-life (/̂ )

Co, = steady-state content of RNA derived either from chemical data or from incorpora-tion of AMP into RNA.(a) Cro is the average of 36 separate chemical determinations. The amount of tRNA was

determined as described by Nwagwu & Lianga (1974). The amount of rRNA was deter-mined by spectrophotometric analysis of each of 18S and 28S rRNA peaks after sucrose-gradient centrifugation.

(6) Coo was derived from the incorporation data of Fig. 2 by calculating the amount of totalRNA synthesized at steady-state at the given rate of synthesis.

(c) The rate of synthesis (Ks) was determined from the equation,

Co, = 5 * where Kd = —(f* = half-life),

(d) The half-life, t§, was derived from Fig. 3 after extrapolating the graph to intersect theabscissa.

* The number of molecules was calculated by assuming that the molecular weights oftRNA, 18S and 28S rRNA are, respectively, 25000, 0-7 x 106 and 1-6 x 106 daltons (Loening,1968).

molecules per DNA content (Table 3). Similar quantities are present in 17-dayembryonic muscle. Thus 18S and 28S rRNA accumulate in approximatelyequal amounts as would be expected since they both originate from a commonprecursor molecule (see Perry, 1976).

In 14-day embryonic muscle the steady-state levels of tRNA, 18S and 28SrRNA derived from incorporation of AMP into RNA are, respectively, 1-44 x109, 7-75 x 107 and 6-61 x 107 molecules per 2N DNA content (Table 3). Similarquantities are also present in 17-day embryonic muscle. Since the steady-statelevels derived from both chemical and incorporation data are in good agree-

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RNA synthesis in embryonic chick muscle 263

Table 4. Specific radioactivities of AMP {dpm/p-mole AMP) in tRNA, 18S rRNA.and rRNA of 14- and 17-day embryonic chick muscle at their respective steady-state levels

Day

1417

pmole AMP perA260 unit RNA (A)

tRNA

2772727727

18SrRNA

3963739637

28SrRNA

3055330553

Total radioactivity atsteady state (B)

tRNA

6692954307

18S 28SrRNA rRNA

95921 7392277669 59818

Specificradioactivity (B/A)

18S 28StRNA rRNA rRNA

2-41 2-42 2-42196 1-96 1-96

Since the specific radioactivity of ATP was determined at steady state, the specific radio-activity of AMP in RNA was also estimated at steady state. The specific radioactivity ofAMP in RNA given as dpm AMP/A260 unit RNA was converted to dpm/pmole AMP inRNA. We calculated (a) the number of moles of AMP in 1 A260 unit of RNA given that (i)1 A26o unit of tRNA is equivalent to 20/*g (Nwagwu & Lianga, 1974); (ii) 1 A260 unit of18S or 28S rRNA is equivalent to 54-5/*g (Wool & Cavicchi, .1967); (iii) AMP represents18-3% of the total nucleotides in tRNA and 24% and .18-5% of all nucleotides in 18S and28S rRNA respectively (Lerner et al. 1963; Loening, 1968); (iv) the average molecular weightof a nucleotide is 330. {b) the radioactivity which would be present in AMP in RNA atsteady state (that is, 100% labelling of AMP) given that (i) after 12 h of labelling, approxi-mately 27 % of the steady-state content of tRNA and 11 % of the steady-state content of eachof 18S and 28S rRNA are radioactive (calculated from Fig. 1 and Table 3). The valuesobtained by using time points other than 12 h do not differ significantly from those given inthe table.

ment, the rates of RNA synthesis and decay based on incorporation of AMPinto RNA are apparently reliable.

Rates of synthesis and decay and half lives of tRNA, 18S and 28S rRNA

From the equations and parameters described by Galau, Lipson, Britten &Davidson (1977) for molecules whose decay follows first-order kinetics, we havedetermined the rates of accumulation of newly synthesized tRNA, 18S and28S rRNA of 14- and 17-day embryonic chick muscle. Ribosomal RNAmolecules, 18S and 28S, are synthesized at similar rates of 9-94 x 103 and 8-48 x103 molecules/min/2N DNA content (Table 3) in 14-day embryonic muscle.Similar rates were obtained for 17-day 18S and 28S rRNA. Transfer RNA of14-day is synthesized at a rate of 2-4 x 105 molecules/min/2N DNA content.The rate for 17-day tRNA is also similar. Thus, the rates of accumulation ofnewly synthesized tRNA and rRNA are not co-ordinately regulated. Thisfinding is collaborated by the results of other workers (see Neidhart, 1964;Smith, 1976). Both 18S and 28S rRNA ofl4- and 17-day embryonic muscledecay with a half-life of 65 h; tRNA decays with a half-life of 50 h (Table 3).

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264 M. NWAGWU AND M. NANA

Specific radioactivity of AMP in tRNA, 18S and 28S rRNA

ATP may be compartmentalized in muscle and the ATP pool we have meas-ured may therefore not be the real precursor pool for AMP in RNA. The resultsin Table 4 show that the specific radioactivity of AMP in tRNA, 18S and 28SrRNA is similar to that of the ATP pool. We therefore conclude that tRNA,18S and 28S rRNA are all synthesized from the same precursor ATP pool(see Wiegers, Kramer, Klapproth & Hilz, 1976).

DISCUSSION

This study represents the first reported attempt to determine the rate ofsynthesis and the half-life of rRNA in developing chick muscle, in vivo. Itsreliability, or otherwise, depends largely on the accuracy of the specific activityof the ATP precursor pool which allowed us to determine more precisely theaccumulation of AMP in RNA. The specific activity of ATP reaches a constantmaximum level within 1 h in general agreement with the observations of otherworkers (Brandhorst & Humphreys, 1971; Bowman & Emerson, 1977). Sincewe have not followed the synthesis of the primary transcription product, prob-ably a 40S ribosomal RNA (Bowman & Emerson, 1977), we cannot make adefinite statement about transcriptional regulation of rRNA synthesis, especiallyas the 40S rRNA precursor may turn over during processing, and the 18S and28S rRNA molecules may themselves turn over before assembly into ribosomes.The rates of RNA synthesis we have determined therefore, more appropriatelyrefer to rates of accumulation of newly synthesized RNA, following transcrip-tion and processing. What is clear, however, is that newly synthesized rRNAaccumulates in ribosomes of muscle of chick embryos, 14 and 17 days old, atsimilar rates.

It should be informative to determine the pattern of accumulation of newlysynthesized RNA in younger embryos in which the percentage of proliferatingcells is higher than those of 14- and 17-day embryos (see Herrmann et al. 1970).One could then follow, in vivo, the pattern of RNA synthesis during the transi-tion from a stage when myoblasts predominate to one in which myotubes andmyofibres form. For practical reasons, we could not include younger embryos inthis study. We presume that our results, at best, would apply also to 11-dayembryos since from these results and those obtained earlier (Nwagwu & Nana,1974), there is apparently a direct relationship between the quantity of RNAand the rate of accumulation of newly synthesized RNA.

Bowman & Emerson (1977) have shown that the specific activity of ATP inmyoblasts is more than ten times that of ATP in fibres, in culture. In chick legmuscle at 14 and 17 days, only 22% and 18%, respectively, of the total cellpopulation are proliferating (Herrmann et al. 1970). However, the total in-corporation of ATP into this relatively small percentage would be higher than

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RNA synthesis in embryonic chick muscle 265

the total incorporation into fibres. Our ATP data therefore reflect the averageincorporation of ATP into both myoblasts and fibres as well as other non-muscle cells.

Both 18S and 28S rRNA decay with a half-life of 65 h (Table 3). Emerson(1971) estimated that the half-life of rRNA of growing fibroblasts is approxi-mately 40 h. Weber (1972) showed that rRNA is stable in growing chickfibroblast cells but begins to turn over with a half-life of 35-45 h as the cellsbecome contact-inhibited. Bowman & Emerson (1977) found that the half-lifeof 18S and 28S rRNA in muscle fibers in culture is 45 h. Abelson, Johnson,Penman & Green (1974) have shown that in resting 3T3 cells, 28S and 18S rRNAdecay with half-lives of 50 and 72 h respectively. The half-life of tRNA ofdeveloping chick muscle of 14- and 17-day-old embryos is 50 h (Table 3).Results obtained by other workers show that the half-life of tRNA is 35-45 hin cultured chick fibroblasts (Weber, 1972), 36 h in resting 3T3 and 3T6 cells and60 h in growing 3T6 cells (Abelson et al. 1974).

We calculated that there are approximately 15 AMP residues in tRNA ofdeveloping chick muscle given that (1) the steady-state amount of AMP intRNA is approximately 30 nmole per A260 unit (calculated from Fig. 1);(2) 1 mg of tRNA is equal to 20 A260 units (Nwagwu & Lianga, 1974); (3)transfer RNA has a molecular weight of 25000 daltons. From the data obtain-able from other systems, it would seem that there are 12-17 AMP residues inseveral tRNA species (see Zachau, 1972). We are therefore confident that themethods we have used to determine the specific activity of the ATP pool andthe accumulation of AMP in tRNA are reliable.

The rates of accumulation of newly synthesized rRNA which we determinedagree with the corresponding rates in other systems (1-16 x 10~8/^g/min/2 NDNA for 18S rRNA at 14 days and 2-26 x 10-Vg/min/2 N DNA for 28SrRNA). In growing fibroblasts the rate of rRNA synthesis is calculated to be4-7 x 10~3 pg/min/2 N DNA content (Emerson & Humphreys, 1971). The ratecalculated for rapidly dividing somatic tissues is approximately 4-5 x 103 rRNAmolecules/min/cell (see Davidson, 1968). Brandhorst & McConkey (1974) haveshown that L cells synthesize rRNA at the rate of 1-8 x 10~2 pg/min/cell. Inblastula-gastrula stages of sea-urchin embryos the rate of rRNA synthesis wasdetermined to be 2-2 x 10"2 pg/min/2 N DNA content (Galau et al. 1977).Bowman & Emerson (1977) calculated the rate of rRNA accumulation inmyoblasts and fibres as 1150 and 630 molecules/min/2 N DNA, in contrast to arate of approximately 7600-10000 molecules/min/2 N DNA obtained in thisstudy. Of course, direct comparisons cannot be made between physiologicalsystems in vitro and in vivo, especially as they are both subject to differentregulating factors, such as hormonal influences, rate of supply of nutrients andinfluence of cell-cell interactions, among others.

The rates we have determined depend principally on three parameters, thesteady-state content of RNA (Coo), the half-life of RNA (from which the decay

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266 M. NWAGWU AND M. NANA

constant Kd is obtained) and the specific activity of the ATP pool. Since thehalf-life of rRNA determined in this study (65 h) is similar to that obtained inmuscle cell cultures by Bowman & Emerson (1977), only our calculation of <?«,could affect the rate of synthesis, Ks. The value for C^ is an average of 36separate chemical determinations. Furthermore, our calculations of CK basedon incorporation of AMP into R.NA and RNA turnover agree favourably withthe values of C^ determined chemically (having regard for all the assumptionsmade in the calculations). There is no evidence for compartmentalization of theATP pool of muscle cells (see Emerson & Humphreys, 1971). The results shownin Table 4 also support this, suggesting that the ATP pool we have measuredsupplies AMP for tRNA and rRNA synthesis. We conclude that the rates ofRNA synthesis we have determined are reliable.

It has been suggested that detailed analysis of ribosome turnover should beundertaken, since ribosome turnover may result in qualitative differencesbetween the ribosomes and in increased efficiency of the ribosomes in proteinsynthesis (Nwagwu & Nana, 1974). The results of this study show that ribo-somes of developing chick muscle are unstable and turnover with a half-life of65 h. Analysis of the efficiency of ribosomes in protein synthesis would elucidatethe role of translational mechanisms in regulating protein synthesis in developingchick muscle.

The research was supported by grants from the National Research Council and BrockUniversity.

REFERENCES

ABELSON, H. T., JOHNSON, L. F., PENMAN, S. & GREEN, H. (1974). Changes in RNA inrelation to growth of the fibroblast. II. The lifetime of mRNA, rRNA and tRNA inresting and growing cells. Cell 1, 161-165.

BRANDHORST, B. P. & HUMPHREYS, T. (1971). Synthesis and decay rates of major classes ofdeoxyribonucleic acid-like ribonucleic acid in sea urchin embryos. Biochemistry 10, 877-881.

BRANDHORST, B. P. & MCCONKEY, E. H. (1974). Stability of nuclear RNA in mammaliancells. / . molec. Biol. 85, 451-463.

BOWMAN, L. H. & EMERSON, C. P. (1977). Post-transcriptional regulation of ribosomeaccumulation during myoblast differentiation. Cell 10, 587-596.

COOPER, H. L. (1973). Degradation of 28S RNA late in ribosomal RNA maturation innon-growing lymphocytes and its renewal after growth stimulation. / . Cell Biol. 59,250-254.

COLEMAN, J. R. & COLEMAN, A. W. (1968). Muscle differentiation and macromolecularsynthesis. / . cell. Physiol. 72, Suppl. 1, 19-34.

DAVIDSON, E. H. (1968). Gene Activity in Early Development. New York: Academic Press.EMERSON, C. P. (1971). Regulation of the synthesis and stability of ribosomal RNA during

contact inhibition of growth. Nature, New Biol. 232, 101-106.EMERSON, C. P. & HUMPHREYS, T. (1971). A simple and sensitive method for quantitative

measurement of cellular RNA synthesis. Analyt. Biochem. 40, 254-266.GALAU, G. A., LIPSON, E. D., BRITTEN, R. J. & DAVIDSON, E. H. (1977). Synthesis and turn-

over of polysomal RNAs in sea urchin embryos. Cell 10, 415-432.HAUSCHKA, P. V. (1973). Analysis of nucleotide pools in animal cells. In Methods in Cell

Biology, vol. (ed. D. M. Prescott), pp. 361-462. New York: Academic Press.

Page 15: Ribonucleic acid synthesi ins embryonic chick muscle, rate of … · Ribosomal RNA obtained as a precipitate by the above procedure, was pelleted by centrifugation at 10000 g for

RNA synthesis in embryonic chick muscle 267HECHT, L. I., ZAMECNIK, P. C, STEPHENSON, M. L. & SCOTT, J. F. (1958). Nucleotide tri-

phosphates as precursors of ribonucleic acid and groups in a mammalian system. /. biol.Chem. 233, 954-963.

HEYWOOD, S. M. & NWAGWU, M. (1969). Partial characterization of presumptive myosinmessenger ribonucleic acid. Biochemistry 8, 3839-3845.

HERRMANN, H., HEYWOOD, S. M. & MARCHOK, A. C. (1970). Reconstruction of muscledevelopment as a sequence of macromolecular synthesis. In Current Topics in DevelopmentalBiology, vol. 5 (ed. A. A. Moscona & A. Monrcy), 181-234. New York: Academic Press.

HOSICK, H. L. & STROHMAN, R. C. (1971). Changes in ribosomal polysomal balance in chickmuscle cells during tissue dissociation, development in culture and exposure to simplifiedculture medium. / . cell. Physiol. 11, 145-156.

HUMPHREYS, T. (1973). Quantitative measurement of RNA synthesis. In Molecular Tech-niques and Approaches in Developmental Biology (ed. Chrispeels), pp. 141-163. New York:Academic Press.

LERNER, M. A., BELL, E. & DARNELL, J. E. (1963). Ribosomal RNA in the developing chickembryo. Science N. Y. 141, 1187-1188.

LOENING, U. E. (1968). Molecular weight of ribosomal RNA in relation to evolution./ . molec. Biol. 38, 355-365.

MAN, N. T. & COLE, R. J. (1972). RNA synthesis during mammalian myogenesis in culture.Expl Cell. Res. 73, 429-435.

MANDEL, P. (1964). Free nucleotides in animal tissues. Prog. Nucl. Acid Res. & Mo I. Biol. 3,299-334.

MARCHOK, A. C. (1966). An autoradiographic observation of nucleotide incorporation indeveloping muscle cells. Expl Cell. Res. 43, 214-217.

NEIDHART, F. C. (1964). The regulation of RNA synthesis in bacteria. Prog. Nucl. AcidRes. & Mo I. Biol. 3, 145-181.

NWAGWU, M. &ENGEMANN, J. (1979). Ribosomal RNA synthesis in developing chickmuscle. / . West African Science Assoc. (in the Press).

NWAGWU, M. & HOSSAIN (1975). Seryl transfer RNA formation by polysomal and super-natant fractions of developing chick muscle. West African Journal of Biological andApplied Chemistry 18, 9-16.

NWAGWU, M. & LIANGA, J. (1974). Changes in seryl-tRNA formation in developing chickmuscle. Can. J. Biochem. 52, 838-844.

NWAGWU, M. & NANA, M. (1974). Quantitative measurement of active polysomes of devel-oping chick muscle. Devi Biol. 41, 1-13.

NWAGWU, M. & ONISHCHUK (1979). Transfer RNA synthesis in developing chick muscle./ . West African Science Assoc. (in the Press).

PENMAN, S. (1966). RNA metabolism in the Hela cell nucleus. / . molec. Biol. 17, 117-130.PERRY, R. P. (1976). Processing of RNA. A. Rev. Biochem. 45, 605-629.SMITH, J. D. (1976). Transcription and processing of transfer RNA precursors. Prog. Nucl.

Res. & Mot. Biol. 16, 25-73.SERAIDARIAN, K., MOINMENTS, F. H. M. & WALLNER, A. (1962). The amount and compart-

mentalization of adenosine diphosphate in muscle. Biochem. biophys. Acta 65, 443-460.SODD, M. A. & DOCTOR, B. P. (1974). Nucleotide sequences of tRNA Meth. Enzym. 29,741-756.WEBER, M. J. (1972). Ribosomal RNA turnover in contact inhibited cells. Nature, New Biol.

235, 58-61.WIEGERS, U., KRAMER, G., KLAPPROTH, K. & HILZ, H. (1976). Separate pyrimidine nucleo-

tide pools for messenger and ribosomal RNA synthesis in HeLe S3 cells. Eur. J. Biochem.64, 535-540.

WILT, F. H. (1969). An artifact in the alkaline hydrolysis of RNA labelled with Guanosine-8-T. Analyt. Biochem. 27, .186-189.

WOOL, I. G. & CAViccHr, P. (1967). Protein synthesis by skeletal muscle ribosomes. Effect ofdiabetes and insulin. Biochemistry 6, 1231-1242.

ZACHAU, H. G. (1972). Transfer ribonucleic acids. In The Mechanism of Protein Synthesis andits Regulation, (ed. L. Bosch), pp. 173-217. New York: American Elsevier.

(Received 5 August 1979)

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