Research and teaching with blogs and wikis [email protected] Feb 23, 2007 Drexel...
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Transcript of Research and teaching with blogs and wikis [email protected] Feb 23, 2007 Drexel...
![Page 1: Research and teaching with blogs and wikis Jean-Claude.Bradley@drexel.edu Feb 23, 2007 Drexel University Chemistry Department Philadelphia Area Educational.](https://reader031.fdocuments.net/reader031/viewer/2022020417/5697bfc01a28abf838ca3be3/html5/thumbnails/1.jpg)
Research and teaching with Research and teaching with blogs and wikis blogs and wikis
[email protected]@drexel.edudu
Feb 23, 2007Feb 23, 2007Drexel University Chemistry Department
Philadelphia Area Educational Technology Conference
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Where is Science headed?Where is Science headed?
WE ARE HEREWE ARE HERE
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The Robot ScientistThe Robot Scientist
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How will this happen?How will this happen?
Self-organizing reduntant processesSelf-organizing reduntant processes Agents can participate with zero or Agents can participate with zero or
near-zero cost (free hosted services)near-zero cost (free hosted services) Fully Open Access (Read and Write)Fully Open Access (Read and Write) Publication of all aspects of the Publication of all aspects of the
scientific process: Open Source scientific process: Open Source Science / Science / Open Notebook ScienceOpen Notebook Science
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How can machines know what How can machines know what is important?is important?
Ask the humansAsk the humans
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UsefulChem BlogUsefulChem Blog
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What chemists think is What chemists think is important in 2005important in 2005
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Find-A-DrugFind-A-Drug
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Diketopiperazine LibraryDiketopiperazine LibraryEvolves to: on pot Evolves to: on pot
Ugi Ugi reaction/cyclizationreaction/cyclization
First iteration: First iteration: Solid Support Solid Support
SynthesisSynthesis
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The Molecules BlogThe Molecules Blog
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The Experiments BlogThe Experiments Blog
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Comments from peersComments from peers
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The UsefulChem WikiThe UsefulChem Wiki
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Telling the story of the failuresTelling the story of the failures
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Experiments moved to wikiExperiments moved to wiki
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Experiment HistoryExperiment History
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Experiment EditsExperiment Edits
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Third Party Time-Stamp on Third Party Time-Stamp on Experiment VersionsExperiment Versions
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Monitoring experimental Monitoring experimental progressprogress
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How are people finding our How are people finding our experiments?experiments?
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Molecules found by InChIMolecules found by InChI
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Automation in UsefulChemAutomation in UsefulChem
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CMLRSS feed on BioclipseCMLRSS feed on Bioclipse
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CMLRSS feed on BloglinesCMLRSS feed on Bloglines
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Open science connectivityOpen science connectivity
More info on open source science here
http://usefulchem.wikispaces.com
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Extending the interaction Extending the interaction outside of scienceoutside of science
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usefulchem.blogspot.comusefulchem.blogspot.com
The blog as an integrative The blog as an integrative tooltool
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usefulchem.wikispaces.com/Exp049usefulchem.wikispaces.com/Exp049
The wiki as the laboratory The wiki as the laboratory notebooknotebook
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usefulchem.wikispaces.com/Exp049 (2 usefulchem.wikispaces.com/Exp049 (2 min)min)
Graphical Mining of Data with Graphical Mining of Data with JSpecViewJSpecView
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neurodatabase.orgneurodatabase.org
Raw Experimental DataRaw Experimental Data
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Selected Experiments (some Selected Experiments (some failed)failed)
Orgprepdaily.wordpress.comOrgprepdaily.wordpress.com
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Orgprepdaily.wordpress.comOrgprepdaily.wordpress.com
Vendor ReliabilityVendor Reliability
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Generalized ProtocolsGeneralized Protocols
Openwetware.orgOpenwetware.org
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Lab Notebook for intra-group Lab Notebook for intra-group communicationcommunication
Openwetware.orgOpenwetware.org
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Discussing HypothesesDiscussing Hypotheses
RRResearch.blogspot.comRRResearch.blogspot.com
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Writing Code for the Writing Code for the Automation ComponentAutomation Component
Also – Rich Apodaca, Christoph Also – Rich Apodaca, Christoph Steinbeck, Peter Murray-RustSteinbeck, Peter Murray-Rust
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