Report of President 2012/2013 - Institute of

Food & Health

>> Book Chapters

>> Books Edited

>> Peer Reviewed Journals

>> Other Journals

>> Conference Publications

>> Other Publications

Book Chapters

Dr Tommy Boland

Purcell, P.J., O'Brien, M., Boland, T.M., McEvoy, M. O'Kiely, P. (2013) 'The Impact of

Perennial Ryegrass Variety Throughout the Growing Season on in vitro Rumen Methane

Output' In: Purcell, P.J., O'Brien, M., Boland, T.M., McEvoy, M. O'Kiely, P (eds).

Breeding strategies for sustainable forage and turf grass improvement. Netherlands:

Springer.

Professor Francis Butler

Mc Carthy, U., Laniel, M., Uysal, I., Corkery, G., Butler, F., McDonnell, K. & Ward, S

(2013) 'Sustainable Global Food Supply Networks' In: Mc Carthy, U., Laniel, M., Uysal,

I., Corkery, G., Butler, F., McDonnell, K. & Ward, S (eds). Sustainable Food

Processing. UK: Blackwell Publishing.

Dr Enda Cummins

Tiwari U. and Cummins E. (2013) 'Sources of phytochemicals - Fruits and vegetables'

In: Tiwari B., Brunton N., Brennan C.S (eds). Handbook of Plant Food Phytochemicals:

Sources, Stability and Extraction. Chichester, West Sussex, PO19 8SQ, UK: Wiley-

Blackwell. , pp.107-137

Professor Nick Holden

A.A. Piwowarczyk, N.M. Holden (2013) 'Adsorption-Desorption Processes and

Mobility of (4-Chloro-2-Methylophenoxy) Acetic Acid (MCPA) in Irish Grassland

Soils' In: Daiki Kobayashi and Eito Watanabe (eds). Handbook on Herbicides:

Biological Activity, Classification and Health & Environmental Implications. United

States of America: Nova Science Publishers.

A.A. Piwowarczyk, N.M. Holden (2013) 'A Laboratory Lysimeter for Pesticide

Transport Studies' In: Daiki Kobayashi and Eito Watanabe (eds). Handbook on

Herbicides: Biological Activity, Classification and Health & Environmental

Implications. United States of America: Nova Science Publishers.

Dr Jean-Christophe Jacquier

Harbourne, N., Marete, E., Jacquier, J.C., O'Riordan, D. (2013) 'Conventional extraction

techniques for phytochemicals' In: Harbourne, N., Marete, E., Jacquier, J.C., O'Riordan,

D (eds). Handbook of Phytochemicals: sources, stability and extraction. England:

Wiley-Blackwell.

Dr James Lyng

Lyng, JG; McKenna, BM (2013) 'Ohmic Pasteurisation of meat and meat products' In:

Kutz, M (eds). Handbook of Farm, Dairy and Food Machinery Engineering.

Philadelphia: Elsevier. , pp.541-570

Dr Kevin McDonnell

Everard, C.D., McDonnell K and Fagan C.C. (2013) 'Environmental Impact Assessment'

In: Everard, C.D., McDonnell K and Fagan C.C (eds). Sustainable Food Processing.

London, UK: Blackwell Publishing.

Professor Colm O'Donnell

B.K. Tiwari, P. Cullen, C. Brennan, C.P. O'Donnell (2013) 'Non thermal processing' In:

B.K. Tiwari, N Brunton and C.S. Brennan (eds). Handbook of Plant Food

Phytochemicals: Sources, Stability and Extraction. UK: Wiley-Blackwell.

Professor Dolores O'Riordan

Harbourne, N., Marete, E., Jacquier, J.C., O'Riordan, D. (2013) 'Conventional extraction

techniques for phytochemicals' In: Harbourne, N., Marete, E., Jacquier, J.C., O'Riordan,

D (eds). Handbook of Phytochemicals: sources, stability and extraction. England:

Wiley-Blackwell.

Professor Shane Ward

Mc Carthy, U., Laniel, M., Uysal, I., Corkery, G., Butler, F., McDonnell, K. & Ward, S

(2013) 'Sustainable Global Food Supply Networks' In: Mc Carthy, U., Laniel, M., Uysal,

I., Corkery, G., Butler, F., McDonnell, K. & Ward, S (eds). Sustainable Food

Processing. UK: Blackwell Publishing.

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Books Edited

Dr Enda Cummins

Cummins E. and Curran T (Ed.). (2013) Biosystems Engineering Research Review 18.

Dublin: UCD.

Dr Tom Curran

Cummins, E. and Curran, T (Ed.) (Ed.). (2013) Biosystems Engineering Research Review

18. Dublin: UCD.

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Peer Reviewed Journals

Dr Tommy Boland

Boland, T.M., Quinlan, C., Pierce, K.M., Lynch, M.B., Kelly, A.K and Purcell, P. J.

(2013) 'The effect of pasture pre-grazing herbage mass on methane emissions, ruminal

fermentation, and average daily gain of grazing beef heifers'. Journal of Animal Science,

91:3867-3874.

Boots,B., Lillis,L., Clipson,N., Petrie,K., Kenny,D.A., Boland,T.M., and Doyle,E (2013)

'Responses of anaerobic rumen fungal diversity (phylum Neocallimastigomycota) to

changes in bovine diet'. Journal of Applied Microbiology, 114:626-635.

Deighton, M.H., O'Loughlin, B.M., Williams, S.R.O., Moate, P.J., Kennedy, E., Boland,

T.M. and Eckard, R.J. (2013) 'Declining sulphur hexafluoride permeability of

polytetrafluoroethylene membranes causes overestimation of calculated ruminant

methane emissions using the tracer Technique'. Animal Feed Science and Technology,

183.

O'Neill, B.F., Lewis, E., O'Donovan, M., Shalloo, L., Galvin, N., Mulligan, F.J., Boland,

T.M. and Delagarde, R. (2013) 'Predicting grass dry matter intake, milk yield and milk

fat and protein yield of spring calving grazing dairy cows during'. Animal, 7:1379-1389.

O'Brien, M., Navarro-Villa, A, Purcell, P., Boland, T.M. and O'Kiely, P. (2013)

'Reducing in vitro methanogenesis for two contrasting diets using a series of inclusion

rates of eleven additives'. Animal Production Science.

Ganche E, Delaby L, O'Donovan M, Boland TM, Kennedy E. (2013) 'Direct and

carryover effect of post-grazing sward height on total lactation dairy cow performance'.

Animal, 7 :1390-1400.

Wims, CM,McEvoy, M,Delaby, L,Boland, TM,O'Donovan, M (2013) 'Effect of

perennial ryegrass (Lolium perenne L.) cultivars on the milk yield of grazing dairy

cows'. Animal, 7 :410-421.

Boots, B,Lillis, L,Clipson, N,Petrie, K,Kenny, DA,Boland, TM,Doyle, E (2013)

'Responses of anaerobic rumen fungal diversity (phylum Neocallimastigomycota) to

changes in bovine diet'. Journal of Applied Microbiology, 114:626-635.

Navarro-Villa, A,O'Brien, M,Lopez, S,Boland, TM,O'Kiely, P (2013) 'In vitro rumen

methane output of grasses and grass silages differing in fermentation characteristics

using the gas-production technique (GPT)'. Grass and Forage Science, 68:228-244.

O'Neill, B.F., Lewis, E., O'Donovan, M., Shalloo, L., Mulligan, F.J., Boland, T.M. and

Delagarde, R. 2013. Grass and forage Science. (2012) 'Evaluation of the GrazeIn model

of grass dry-matter intake and milk production prediction for dairy cows in temperate

grass-based production systems. 1Sward characteristics and grazing management

factors'. Grass and Forage Science .

O'Neill, B.F., Lewis, E., O'Donovan, M., Shalloo, L., Mulligan, F.J., Boland, T.M. and

Delagarde, R. (2012) 'valuation of the GrazeIn model of grass dry-matter intake and

milk production prediction for dairy cows in temperate grass-based production systems

2 Animal characteristics'. Grass and Forage Science.

Creighton, P., Gilliland, T.J., Delaby, L., Kennedy, E., Boland, T.M. and O'Donovan, M

(2012) '. Effect of Lolium perenne sward density on productivity under simulated and

actual cattle grazing'. Grass and Forage Science.

Navarro-Villa, A. O'Brien, M., López, S., Boland, T.M. and O'Kiely, P. (2012) 'In vitro

rumen methane output of grasses and grass silages differing in fermentation

characteristics using the gas-production technique (GPT)'. Grass and Forage Science.

Dr Lorraine Brennan

Morris C, Gibney M, Roche H, Ryan M, Grada O, De Vito G, Gibney E, Brennan L

(2013) 'The relationship between aerobic fitness level and metabolic profiles in healthy

adults'. Molecular Nutrition and Food Research.

Morris C, O'Grada C, Ryan M, Roche HM, Gibney MJ, Gibney ER, Brennan L (2013)

'Identification of differential responses to an oral glucose tolerance test in healthy

adults'. PLoS ONE, 8 (8).

Matoba S, Bender K, Fahey AG, Mamo S, Brennan L, Lonergan P, Fair T (2013)

'Predictive value of bovine follicular components as markers of oocyte developmental

potential'. Reproduction, fertility, and development.

Neal CM, Hunter AM, Brennan L, O'Sullivan A, Hamilton DL, De Vito G, Galloway

SD (2013) 'Six weeks of a polarized training-intensity distribution leads to greater

physiological and performance adaptations than a threshold model in trained cyclists'.

Journal of Applied Physiology, 114 (4):461-471.

Brennan, L (2013) 'Metabolomics in nutrition research: current status and perspectives'.

Biochemical Society Transactions, 41:670-673.

Forte, R,Boreham, CAG,Leite, JC,De Vito, G,Brennan, L,Gibney, ER,Pesce, C (2013)

'Enhancing cognitive functioning in the elderly: multicomponent vs resistance training'.

Clinical Interventions in Aging, 8:19-27.

Ryan, MF,Grada, CO,Morris, C,Segurado, R,Walsh, MC,Gibney, ER,Brennan,

L,Roche, HM,Gibney, MJ (2013) 'Within-person variation in the postprandial lipemic

response of healthy adults'. American Journal of Clinical Nutrition, 97:261-267.

Neal, CM,Hunter, AM,Brennan, L,O'Sullivan, A,Hamilton, DL,DeVito, G,Galloway,

SDR (2013) 'Six weeks of a polarized training-intensity distribution leads to greater

physiological and performance adaptations than a threshold model in trained cyclists'.

Journal of applied physiology (Bethesda, Md.: 1985), 114:461-471.

Monahan FJ, Moloney AP, Osorio MT, Rohrle, FT, Schmidt O and Brennan L (2012)

'Authentication of grass-fed beef using bovine muscle, hair or urine'. Trends in Food

Science & Technology, 28 (2):69-76.

Dr Nigel Patrick Brunton

Russo, Daniela, Kenny, Owen, Smyth, Thomas J., Milella, Luigi, Hossain, Mohammad

B., Diop, Moussoukhoye Sissokho, Rai, Dilip K., Brunton, Nigel P. (2013) 'Profiling of

Phytochemicals in Tissues from Sclerocarya birrea by HPLC-MS and Their Link with

Antioxidant Activity'. ISRN Chromatography, 2013.

Tierney, MichelleS, Soler-Vila, Anna, Rai, DilipK, Croft, AnnaK, Brunton, NigelP,

Smyth, ThomasJ (2013) 'UPLC-MS profiling of low molecular weight phlorotannin

polymers in Ascophyllum nodosum, Pelvetia canaliculata and Fucus spiralis'.

Metabolomics, :1-12.

Tierney, Michelle S., Smyth, Thomas J., Hayes, Maria, Soler-Vila, Anna, Croft, Anna

K., Brunton, Nigel (2013) 'Influence of pressurised liquid extraction and solid liquid

extraction methods on the phenolic content and antioxidant activities of Irish

macroalgae'. International Journal of Food Science and Technology, 48 (4):860-869.

Brunton, Nigel P (2013) 'Thermal processing'. Handbook of Plant Food

Phytochemicals: Sources, Stability and Extraction, :247-259.

Lyng J.G., , Zhang L., , Marra F., , Brunton N.P. (2013) 'Effect of freezing rate and

comminution on dielectric properties of pork'. Czech Journal of Food Science, 31:413-

418.

Mitchell, Michelle, Brunton, Nigel P., Wilkinson, Martin G. (2013) 'The influence of

salt taste threshold on acceptability and purchase intent of reformulated reduced sodium

vegetable soups'. Food Quality and Preference, 28 (1):356-360.

Mitchell, Michelle, Brutnon, Nigel P., Fitzgerald, Richard J., Wilkinson, Martin G.

(2013) 'The Use of Herbs, Spices, and Whey Proteins as Natural Flavor Enhancers and

Their Effect on the Sensory Acceptability of Reduced-Salt Chilled Ready-Meals'.

Journal of Culinary Science & Technology, 11 (3):222-240.

Olivia Kenny, Catherine McCarthy, Nigel Brunton, Mohammad Hossain, Dilip Rai,

Stuart Collins, Peter Jones, Anita R. Maguire, Nora M. O'Brien (2013) 'Anti-

inflammatory properties of potato glycoalkaloids in stimulated Jurkat and Raw 264.7

mouse macrophages'. Life Sciences.

Rawson, Ashish, Brunton, Nigel P, Rai, Dilip K, McLoughlin, Padraig, Tiwari, Brijesh

K, Tuohy, Maria G (2013) 'Stability of falcarinol type polyacetylenes during processing

of Apiaceae vegetables'. Trends in Food Science & Technology.

Rawson, Ashish, Hossain, Mohammad B, Patras, Ankit, Tuohy, Maria, Brunton, Nigel

(2013) 'Effect of boiling and roasting on the polyacetylene and polyphenol content of

fennel (< i> Foeniculum vulgare) bulb'. Food Research International, 50 (2):513-518.

Reilly, Kim, Cullen, Eileen, Lola-Luz, Theodora, Stone, Dorothy, Valverde, Juan,

Gaffney, Michael, Brunton, Nigel, Grant, James, Griffiths, Bryan S. (2013) 'Effect of

organic, conventional and mixed cultivation practices on soil microbial community

structure and nematode abundance in a cultivated onion crop'. Journal of the Science of

Food and Agriculture.

Reilly, Kim, Valverde, Juan, Finn, Leo, Rai, Dilip K., Brunton, Nigel, Sorensen, Jens C.,

Sorensen, Hilmer, Gaffney, Michael (2013) 'Potential of cultivar and crop management

to affect phytochemical content in winter-grown sprouting broccoli (Brassica oleracea L.

var. italica)'. Journal of the Science of Food and Agriculture.

Tiwari U, Rawson A., Valverde J., Reilly K., Brunton N. and Cummins E.* (2013) 'A

Farm- to- Fork Model to Evaluate the Level of Polyacetylenes in Processed Carrots'.

International Journal of Food Science and Technology, 48 (8):1626-1639.

Tierney, M. S., Smyth, T. J., Rai, D. K., Soler-Vila, A., Croft, A. K., Brunton, N. (2013)

'Enrichment of polyphenol contents and antioxidant activities of Irish brown macroalgae

using food-friendly techniques based on polarity and molecular size'. Food Chemistry,

139 (1-4):753-761.

Tiwari, U., Cummins E., Brunton, N., O'Donnell, C. and Gallagher E. (2013) 'A

comparison of oat flour and oat bran-based bread formulations'. British Food Journal,

115 (2):300-313.

Kenny, Olivia M. McCarthy, Catherine M. Brunton, Nigel P. Hossain, Mohammad B.

Rai, Dilip K. Collins, Stuart G. Jones, Peter W. Maguire, Anita R. O'Brien, Nora M.

(2013) 'Anti-inflammatory properties of potato glycoalkaloids in stimulated Jurkat and

Raw 264.7 mouse macrophages'. Life Sciences, 92 (13):775-782.

Kenny, O., Smyth, T. J., Hewage, C. M., Brunton, N. P (2013) 'Antioxidant properties

and quantitative UPLC-MS analysis of phenolic compounds from extracts of fenugreek

(Trigonella foenum-graecum) seeds and bitter melon (Momordica charantia) fruit'. Food

Chemistry, 141 (4):4295-4302.

Mireia Corell, Eimilee Sheehy Paul Evans, Nigel Brunton Juan Valverde (2013)

'Absolute Configuration of Falcarinol (9Z-heptadeca-1,9-diene-4,6-diyn-3-ol) from

Pastinaca sativa'. Natural Product Reports.

Keenan, D. F., Valverde, J., Gormley, R., Butler, F., Brunton, N. P. (2012) 'Selecting

apple cultivars for use in ready-to-eat desserts based on multivariate analyses of

physico-chemical properties'. LWT-Food Science and Technology, 48 (2):308-315.

Rawson, A., Tiwari, B. K., Brunton, N., Brennan, C., Cullen, P. J., O'Donnell, C. P.

(2012) 'Application of Supercritical Carbon Dioxide to Fruit and Vegetables: Extraction,

Processing, and Preservation'. Food Reviews International, 28 (3):253-276.

Professor Francis Butler

Juneja, V.K.,Gonzales-Barron, U., Butler, F., Yadav, A.S., Friedman, M. (2013)

'Predictive thermal inactivation model for the combined effect of temperature,

cinnamaldehyde and carvacrol on starvation-stressed multiple Salmonella serotypes in

ground chicken'. International Journal of Food Microbiology, 165 (2):184-199.

Gonzales-Barron, U., Cadavez, V., Sheridan, J.J.,Butler, F. (2013) 'Modelling the effect

of chilling on the occurrence of Salmonella on pig carcasses at study, abattoir and batch

levels by meta-analysis'. International Journal of Food Microbiology, 163 (2-3):101-

113.

Gonzales-Barron, U., Zwietering, M.H., Butler, F. (2013) 'A novel derivation of a

within-batch sampling plan based on a Poisson-gamma model characterising low

microbial counts in foods'. International Journal of Food Microbiology, 161 (2):84-96.

Gibbons, JF,Boland, F,Buckley, JF,Butler, F,Egan, J,Fanning, S,Markey, BK,Leonard,

FC (2013) 'Influences on antimicrobial prescribing behaviour of veterinary practitioners

in cattle practice in Ireland'. Veterinary Record, 172.

Keenan, D. F., Valverde, J., Gormley, R., Butler, F., Brunton, N. P. (2012) 'Selecting

apple cultivars for use in ready-to-eat desserts based on multivariate analyses of

physico-chemical properties'. LWT-Food Science and Technology, 48 (2):308-315.

Dr Enda Cummins

Tiwari U, Rawson A., Valverde J., Reilly K., Brunton N. and Cummins E.* (2013) 'A

Farm- to- Fork Model to Evaluate the Level of Polyacetylenes in Processed Carrots'.

International Journal of Food Science and Technology, 48 (8):1626-1639.

Cushen M., Kerry J., Morris M., Cruz-Romerob,M., Cummins E.* (2013) 'Migration

and exposure assessment of silver from a PVC nanocomposite'. Food Chemistry, 139 (1-

4):389-397.

Harris S, Cormican M and Cummins E.* (2013) 'Risk Ranking of Antimicrobials in the

Environment: An Irish case study'. Human and Ecological Risk Assessment, 19

(5):1264-1284.

Tiwari U. and Cummins E*; (2013) 'Factors influencing levels of phytochemicals in

selected fruit and vegetables during pre and post food processing operations'. Food

Research International, 50 (2):497-506.

Harris S., Morris C., Morris D., Cormican M. and Cummins E.* (2013) 'The effect of

hospital effluent on antimicrobial resistant E. coli within a municipal wastewater

system'. Environmental Science: Processes & Impacts, 15 (3):617-622.

Harris S, Morris C, Morris D, Cormican M and Cummins E.* (2013) 'Simulation Model

to Predict the Fate and effect of Ciprofloxacin in the Environment after Wastewater

Treatment'. Journal of Environmental Science and Health, Part A: Toxic/Hazardous

Substances & Environmental Engineering, 48 (7):675-685.

Tiwari, U., Cummins E., Brunton, N., O'Donnell, C. and Gallagher E. (2013) 'A

comparison of oat flour and oat bran-based bread formulations'. British Food Journal,

115 (2):300-313.

Coffey R., Dorai-Raj S., O'Flaherty V., Cormical M. and Cummins E. (2013) 'Modelling

of Pathogenic Indicator Organisms in a Small-Scale Agricultural Catchment using

SWAT'. International Journal of Human and Ecological Risk Asse, 19 (1):232-253.

Coffey, R,Dorai-Raj, S,O'Flaherty, V,Cormican, M,Cummins, E (2013) 'Modeling of

Pathogen Indicator Organisms in a Small-Scale Agricultural Catchment Using SWAT'.

Human and Ecological Risk Assessment, 19:232-253.

Harris, S,Morris, C,Morris, D,Cormican, M,Cummins, E (2013) 'The effect of hospital

effluent on antimicrobial resistant E. coli within a municipal wastewater system'.

Environmental Science-Processes & Impacts, 15:617-622.

Tiwari, U,Cummins, E,Brunton, N,O'Donnell, C,Gallagher, E (2013) 'A comparison of

oat flour and oat bran-based bread formulations'. British Food Journal, 115:300-313.

Tiwari, U,Cummins, E (2013) 'Factors influencing levels of phytochemicals in selected

fruit and vegetables during pre- and post-harvest food processing operations'. Food

Research International, 50:497-506.

Coffey R, Benham B, Krometis LA, Wolfe ML and Cummins E (2013) 'Assessing the

Effects of Climate Change on Waterborne Microorganisms: Implications for EU and US

Water Policy'. Human and Ecological Risk Assessment.

Harris S., Cormican M., and Cummins E*. (2012) 'The effect of conventional

wastewater treatment on the levels of antimicrobial-resistant bacteria in effluent: a meta-

analysis of current studies'. Environmental Geochemistry and Health, 34 (6):749-762.

Labite H and Cummins E*; (2012) 'A Quantitative Approach for Ranking Human

Health Risks from Pesticides in Irish Groundwater'. Human and Ecological Risk

Assessment, 18 (6):1549-1185.

Dr Tom Curran

P. O. Mc Alpine, C. J. O'Shea, P. F. Varley, P. Solan, T. Curran, and J. V. O'Doherty

(2012) 'The effect of protease and nonstarch polysaccharide enzymes on manure odor

and ammonia emissions from finisher pigs'. Journal of Animal Science, 90:369-371.

Professor Séamus Fanning

Haughton, P.N., Lyng, J., Fanning, S., Whyte, P. (2013) 'Potential of a commercially

available water acidification product for reducing Campylobacter in broilers prior to

slaughter'. Poultry Science, 54:319-324.

Bolton, D,Patriarchi, A,Fox, A,Fanning, S (2013) 'A study of the molecular basis of

quinolone and macrolide resistance in a selection of Campylobacter isolates from

intensive poultry flocks'. Food Control, 30:222-226.

Beuchat, LR,Komitopoulou, E,Beckers, H,Betts, RP,Bourdichon, F,Fanning, S,Joosten,

HM,Ter Kuile, BH (2013) 'Low-Water Activity Foods: Increased Concern as Vehicles

of Foodborne Pathogens'. J FOOD PROTECT, 76:150-172.

Gibbons, JF,Boland, F,Buckley, JF,Butler, F,Egan, J,Fanning, S,Markey, BK,Leonard,

FC (2013) 'Influences on antimicrobial prescribing behaviour of veterinary practitioners

in cattle practice in Ireland'. Veterinary Record, 172.

Monaghan, A,Byrne, B,Fanning, S,Sweeney, T,McDowell, D,Bolton, DJ (2013)

'Serotypes and virulence profiles of atypical enteropathogenic Escherichia coli (EPEC)

isolated from bovine farms and abattoirs'. Journal of Applied Microbiology, 114:595-

603.

O'Leary, D,Mc Cabe, EM,McCusker, MP,Martins, M,Fanning, S,Duffy, G (2013)

'Microbiological study of biofilm formation in isolates of Salmonella enterica

Typhimurium DT104 and DT104b cultured from the modern pork chain'. Int J Food

Microbiol, 161:36-43.

Gibbons, JF,Markey, BK,Jahns, H,Boland, F,Abbott, Y,Burns, A,Egan, J,Fanning,

S,Gutierrez, M,Leonard, FC (2013) 'Investigation of the persistence and transmission of

MRSA CC 5 in pigs following intra-nasal inoculation'. Veterinary Microbiology,

162:771-778.

Pascu, ML,Danko, B,Martins, A,Jedlinszki, N,Alexandru, T,Nastasa, V,Boni,

M,Militaru, A,Andrei, IR,Staicu, A,Hunyadi, A,Fanning, S,Amaral, L (2013) 'Exposure

of Chlorpromazine to 266 nm Laser Beam Generates New Species with Antibacterial

Properties: Contributions to Development of a New Process for Drug Discovery'. PLoS

ONE, 8.

De Majumdar, S,Veleba, M,Finn, S,Fanning, S,Schneiders, T (2013) 'Elucidating the

Regulon of Multidrug Resistance Regulator RarA in Klebsiella pneumoniae'.

Antimicrobial Agents and Chemotherapy, 57:1603-1609.

Jarvis, KG,Yan, QQ,Grim, CJ,Power, KA,Franco, AA,Hu, L,Gopinath,

G,Sathyamoorthy, V,Kotewicz, ML,Kothary, MH,Lee, C,Sadowski, J,Fanning, S,Tall,

BD (2013) 'Identification and Characterization of Five New Molecular Serogroups of

Cronobacter spp'. Foodborne Pathog Dis, 10 :343-352.

Zhou, ZM,McCann, A,Litrup, E,Murphy, R,Cormican, M,Fanning, S,Brown,

D,Guttman, DS,Brisse, S,Achtman, M (2013) 'Neutral Genomic Microevolution of a

Recently Emerged Pathogen, Salmonella enterica Serovar Agona'. PLoS Genetics, 9.

Monaghan A, Byrne B, Fanning S, Sweeney T, McDowell D, Bolton DJ (2012)

'Serotypes and virulotypes of non-O157 shiga-toxin producing Escherichia coli (STEC)

on bovine hides and carcasses'. Food Microbiology, 32 (2):223-229.

Monaghan, n, Byrne, B., Fanning, S., Sweeney, T., McDowell, D., Bolton, D.J. (2012)

'Serotypes and virulotypes of non-O157 shiga-toxin producing Escherichia coli (STEC)

on bovine hides and carcasses'. Food microbiology, 32 (2):223-229.

Haughton, P.N., Lyng, J., Cronin, D., Morgan, D., Fanning, S., Whyte, P. (2012)

'Susceptibility of Campylobacter to high intensity near ultraviolet/visible 3955nm light

and its effectiveness for the decontamination of raw chicken and contact surfaces'.

International Journal of Food Microbiology, 159 (3):267-273.

Dr Eileen Gibney

Morris C, Gibney M, Roche H, Ryan M, Grada O, De Vito G, Gibney E, Brennan L

(2013) 'The relationship between aerobic fitness level and metabolic profiles in healthy

adults'. Molecular Nutrition and Food Research.

O'Brien, S.A., Feeney, E.L., Scannell, A.G.M., Markey, A., Gibney, E.R. (2013) 'Bitter

taste perception and dietary intake patterns in Irish children'. Journal Of Nutrigenetics

And Nutrigenomics, 6 (1):43-58.

Morris C, O'Grada C, Ryan M, Roche HM, Gibney MJ, Gibney ER, Brennan L (2013)

'Identification of differential responses to an oral glucose tolerance test in healthy

adults'. PLoS ONE, 8 (8).

Drummond EM and Gibney ER (2013) 'Epigenetic regulation in obesity'. Current

Opinion in Clinical Nutrition and Metabolic Care, 16 (4):392-397.

Forte R, Pesce C, Leite JC, De Vito G, Gibney ER, Tomporowski PD, Boreham CA.

(2013) 'Executive function moderates the role of muscular fitness in determining

functional mobility in older adults'. Aging Clin Exp Res, 25 (3):291-298.

Forte, R,Boreham, CAG,Leite, JC,De Vito, G,Brennan, L,Gibney, ER,Pesce, C (2013)

'Enhancing cognitive functioning in the elderly: multicomponent vs resistance training'.

Clinical Interventions in Aging, 8:19-27.

Ryan, MF,Grada, CO,Morris, C,Segurado, R,Walsh, MC,Gibney, ER,Brennan,

L,Roche, HM,Gibney, MJ (2013) 'Within-person variation in the postprandial lipemic

response of healthy adults'. American Journal of Clinical Nutrition, 97:261-267.

Drummond, EM,Harbourne, N,Marete, E,Martyn, D,Jacquier, JC,O'Riordan, D,Gibney,

ER (2013) 'Inhibition of Proinflammatory Biomarkers in THP1 Macrophages by

Polyphenols Derived From Chamomile, Meadowsweet and Willow bark'. Phytotherapy

research : PTR, 27 :588-594.

O'Brien, SA,Feeney, EL,Scannell, AGM,Markey, A,Gibney, ER (2013) 'Bitter Taste

Perception and Dietary Intake Patterns in Irish Children'. Journal Of Nutrigenetics And

Nutrigenomics, 6:43-58.

Professor Mike Gibney

Morris C, Gibney M, Roche H, Ryan M, Grada O, De Vito G, Gibney E, Brennan L

(2013) 'The relationship between aerobic fitness level and metabolic profiles in healthy

adults'. Molecular Nutrition and Food Research.

Martyn DM, McNulty BA, Nugent AP, Gibney MJ (2013) 'Food additives and preschool

children. Proc Nutr Soc. 2013 Feb;72(1):109-16'. Proceedings of the Nutrition Society,

72 (1):109-116.

Gibney MJ, Walsh MC. The future direction of personalised nutrition: my diet, my

phenotype, my genes. Proc Nutr Soc. 2013 Jan 30:1-7. (2013) 'The future direction of

personalised nutrition: my diet, my phenotype, my genes'. Proceedings of the Nutrition

Society, 30:1-7.

Devlin NF, McNulty BA, Gibney MJ, Thielecke F, Smith H, Nugent AP (2012) 'Whole

grain intakes in the diets of Irish children and teenagers'. British Journal of Nutrition.

Professor Nick Holden

Yan, M.-J., Humphreys, J., Holden, N. M. (2013) 'LCA of milk production from

commercial dairy farms: the influence of management tactics'. Journal of Dairy Science,

96:4112-4124.

Kerebel A., Jordan P, Cassidy, R., Holden, N.M (2013) 'Farmer Perception Of Suitable

Conditions For Slurry Application Compared With Decision Support System

Recommendations'. Agricultural Systems, 120:49-60.

Yan, M.-J., Humphreys, J., Holden, N. M (2013) 'Evaluation of Input-Output and

process based LCA of Irish milk production'. Journal of Agricultural Science, 151:701-

713.

Kerebel, A., R. Cassidy, P. Jordan, N. M. Holden (2013) 'Soil Moisture Deficit as a

predictor of the trend in soil water status of grass fields'. Soil Use and Management,

29:419-431.

Jianjun Cao, E, Yeh, N.M. Holden, Yangyang Yang (2013) 'The effects of enclosures

and land-use contracts on grassland degradation on the Qinghai Tibetan plateau'.

Journal of Arid Environments, 97:3-8.

Piwowarczyk A A. and N M. Holden (2013) 'Phenoxyalkanoic acid herbicide sorption

and the effect of co-application in a Haplic Cambisol with contrasting management'.

Chemosphere, 90:535-541.

Yan, M-J, Humphreys, J. and Holden, N. M (2013) 'The carbon footprint of pasture

based milk production: can white clover make a difference?'. Journal of Dairy Science,

96:857-865.

J O'Connell, John Connolly, Eric F. Vermote and Nicholas M. Holden (2013)

'Radiometric normalisation of a multispectral database of satellite imagery of peatlands

for change detection monitoring'. International Journal of Remote Sensing, 32:2377-

2393.

Labite H, N. M. Holden, K G. Richards, G Kramers, A Premrov, C. E. Coxon, E

Cummin (2013) 'Comparison of pesticide leaching potential to groundwater under EU

FOCUS and site specific conditions'. Science of the Total Environment, 463-464:432-

441.

Dr Jean-Christophe Jacquier

Egan, T.a b and Jacquier, J.-C.a and Rosenberg, Y.b and Rosenberg, M.b (2013) 'Cold-

set whey protein microgels for the stable immobilization of lipids'. Food Hydrocolloids,

31 (2):317-324.

Harbourne, N. and Marete, E. and Jacquier, J.C. and O'Riordan, D. (2013) 'Stability of

phytochemicals as sources of anti-inflammatory nutraceuticals in beverages - A review'.

Food Research International, 50 (2):480-486.

Marete, E.N. and Jacquier, J.-C. and O'Riordan, D. (2013) 'Effect of processing

temperature on the stability of parthenolide in acidified feverfew infusions'. Food

Research International, 50 (2):593-596.

Drummond, E.M. and Harbourne, N. and Marete, E. and Martyn, D. and Jacquier, J.C.

and O'Riordan, D. and Gibney, E.R. (2013) 'Inhibition of proinflammatory biomarkers

in THP1 macrophages by polyphenols derived from chamomile, meadowsweet and

willow bark'. Phytotherapy Research, 27 (4):588-594.

Professor Cecily Kelleher

McGorrian C, O' Hara MC, Reid V, Minogue M, Fitzpatrick P, Kelleher C. (2013) 'A

brief cookery skills intervention is no more effective than written information alone in

reducing body mass index in overweight cardiac rehabilitation patients'. Health

Promotion International.

Murphy, TM,Mullins, N,Ryan, M,Foster, T,Kelly, C,McClelland, R,O'Grady,

J,Corcoran, E,Brady, J,Reilly, M,Jeffers, A,Brown, K,Maher, A,Bannan, N,Casement,

A,Lynch, D,Bolger, S,Buckley, A,Quinlivan, L,Daly, L,Kelleher, C,Malone, KM (2013)

'Genetic variation in DNMT3B and increased global DNA methylation is associated

with suicide attempts in psychiatric patients'. Genes Brain And Behavior, 12:125-132.

O'Donovan, A,Rush, G,Hoatam, G,Hughes, BM,McCrohan, A,Kelleher, C,O'Farrelly,

C,Malone, KM (2013) 'SUICIDAL IDEATION IS ASSOCIATED WITH ELEVATED

INFLAMMATION IN PATIENTS WITH MAJOR DEPRESSIVE DISORDER'.

Depression And Anxiety, 30:307-314.

Shortt, E,McGorrian, C,Kelleher, C (2013) 'A qualitative study of infant feeding

decisions among low-income women in the Republic of Ireland'. Midwifery, 29:453-460.

.Murphy TM, Mullins N, Ryan M, Foster T, Kelly C, McClelland R, O'Grady J,

Corcoran E, Brady J, Reilly M, Jeffers A, Brown K, Maher A, Bannan N, Casement A,

Lynch D, Bolger S, Buckley A, Quinlivan L, Daly L, Kelleher C, Malone KM. (2012)

'Genetic variation in DNMT3B and increased global DNA methylation is associated

with suicide attempts in psychiatric patients'. Genes, Brain and Behavior.

Dr James Lyng

Lyng J.G., , Zhang L., , Marra F., , Brunton N.P. (2013) 'Effect of freezing rate and

comminution on dielectric properties of pork'. Czech Journal of Food Science, 31:413-

418.

Haughton, P.N., Lyng, J., Fanning, S., Whyte, P. (2013) 'Potential of a commercially

available water acidification product for reducing Campylobacter in broilers prior to

slaughter'. Poultry Science, 54:319-324.

Halpin, R.M., Cregenzan-Alberti, O., Whyte, P., Lyng, J.G., Noci, F. (2013) 'Combined

treatment with mild heat, manothermosonication and pulsed electric fields reduces

microbial growth in milk'. Food Control, 34:364-371.

McDonnell, C.K., Allen, P., Duggan, E., Arimi, J.M., Casey, E., Duane, G. & Lyng, J.G

(2013) 'The effect of salt and fibre direction on water dynamics, distribution and

mobility in pork muscle: A low field NMR study'. Meat Science, 95:51-58.

O'Dowd, LP; Arimi, JM; Noci, F; Cronin, DA; Lyng, JG (2013) 'An assessment of the

effect of pulsed electrical fields on tenderness and selected quality attributes of post

rigour beef muscle'. Meat Science, 93 (2):303-309.

Haughton, P.N., Lyng, J., Cronin, D., Morgan, D., Fanning, S., Whyte, P. (2012)

'Susceptibility of Campylobacter to high intensity near ultraviolet/visible 3955nm light

and its effectiveness for the decontamination of raw chicken and contact surfaces'.

International Journal of Food Microbiology, 159 (3):267-273.

Dr Kevin McDonnell

Murphy, F., Devlin, G. and McDonnell, K; (2013) 'The Evaluation Of Flash Point And

Cold Filter Plugging Point With Blends Of Diesel And Cyn-Diesel Pyrolysis Fuel For

Automotive Engines'. the open fuels and energy science journal, 6 :1-8.

Devlin, G. Klvac, R. and McDonnell, K; (2013) 'Fuel efficiency and CO2 emissions of

biomass based haulage in Ireland - A case study'. Energy, 54:55-62.

Galbally, P,Ryan, D,Fagan, CC,Finnan, J,Grant, J,McDonnell, K (2013) 'Biosolid and

distillery effluent amendments to Irish short rotation coppiced willow plantations:

Impacts on groundwater quality and soil'. Agricultural Water Management, 116:193-

203.

Henihan, AM,Bowen, B,Lynch, D,McDonnell, K,Kwapinski, W,Leahy, JJ (2013)

'Utilisation of poultry litter as an energy feedstock'. BIOMASS & BIOENERGY, 4 :197-

204.

Dr Fiona McGillicuddy

Finucane OM, Reynolds CM, McGillicuddy FC, Roche HM (2012) 'Insights into the

role of macrophage migration inhibitory factor in obesity and insulin resistance'. The

Proceedings of the Nutrition Society, 71 (4):622-633.

Börgeson E, McGillicuddy FC, Harford KA, Corrigan N, Higgins DF, Maderna P,

Roche HM, Godson C (2012) 'Lipoxin A4 attenuates adipose inflammation'. FASEB

Journal, 26 (10):4287-4294.

Oliver, E., McGillicuddy, F. C., Harford, K. A., Reynolds, C. M., Phillips, C. M.,

Ferguson, J. F., Roche, H. M. (2012) 'Docosahexaenoic acid attenuates macrophage-

induced inflammation and improves insulin sensitivity in adipocytes-specific differential

effects between LC n-3 PUFA'. J Nutr Biochem, 23 (9):1192-200.

Professor Frank Monahan

Contini C, lvarez, R, O'Sullivan M, Dowling D, Gargan S, and Monahan FJ. (2013)

'Effect of an active packaging with Citrus extract on lipid oxidation and sensory quality

of cooked turkey meat'. Meat Science.

Contini C, Valzacchi S, O'Sullivan M, Simoneau C, Dowling DP and Monahan FJ

(2013) 'Overall Migration and Kinetics of Release of Antioxidant Compounds from

Citrus Extract-Based Active Packaging'. Journal of Agricultural and Food Chemistry.

Luciano, G,Pauselli, M,Servili, M,Mourvaki, E,Serra, A,Monahan, FJ,Lanza, M,Priolo,

A,Zinnai, A,Mele, M (2013) 'Dietary olive cake reduces the oxidation of lipids,

including cholesterol, in lamb meat enriched in polyunsaturated fatty acids'. Meat Sci,

93:703-714.

Monahan, F.J., Moloney, A.P., Osorio, M.T., Röhrle, F.T., Schmidt, O. and Brennan, L.

(2012) 'Authentication of grass-fed beef using bovine muscle, hair or urine'. Trends in

Food Science & Technology, 28 (2):69-76.

Dr Anne Nugent

Martyn DM, McNulty BA, Nugent AP, Gibney MJ. (2013) 'Food additives and

preschool children'. Proceedings of the Nutrition Society, 72 (109).

Devlin NF, McNulty BA, Gibney MJ, Thielecke F, Smith H, Nugent AP (2013)

'Wholegrain intakes in the diets of Irish children and teenagers'. British Journal of

Nutrition, 110 (2):354-362.

Devlin UM, McNulty BA, Nugent AP, Gibney MJ. (2012) 'The use of cluster analysis to

derive dietary patterns: methodological considerations, reproducibility, validity and the

effect of energy mis-reporting'. Proceedings of the Nutrition Society.

Professor John O'Doherty

Walsh, Ann M and Sweeney, Torres and Bahar, Bojlul and O'Doherty, John V (2013)

'Multi-functional roles of chitosan as a potential protective agent against obesity'. PLoS

ONE, 8 (1).

Bahar, Bojlul and O'Doherty, John V and O'Doherty, Alan M and Sweeney, Torres

(2013) 'Chito-Oligosaccharide Inhibits the De-Methylation of a CpG Island within the

Leptin (LEP) Promoter during Adipogenesis of 3T3-L1 Cells'. PLoS ONE, 8 (3).

Murphya, Padraigin and Bello, Fabio Dal and O'Doherty, John and Arendt, Elke K and

Sweeney, Torres and Coffey, Aidan (2013) 'The effects of liquid versus spray-dried

Laminaria digitata extract on selected bacterial groups in the piglet gastrointestinal tract

(GIT) microbiota'. Anaerobe.

Hamill, Ruth M and Aslan, Ozlem and Mullen, Anne M and O'Doherty, John V and

McBryan, Jean and Morris, Dermot G and Sweeney, Torres (2013) 'Transcriptome

analysis of porcine M. semimembranosus divergent in intramuscular fat as a

consequence of dietary protein restriction'. BMC Genomics, 14 (1).

Murphy, P and Dal Bello, F and O'Doherty, J and Arendt, EK and Sweeney, T and

Coffey, A (2013) 'Analysis of bacterial community shifts in the gastrointestinal tract of

pigs fed diets supplemented with $\beta$-glucan from Laminaria digitata, Laminaria

hyperborea and Saccharomyces cerevisiae'. animal, :1-9.

Leliveld, LMC and Riemensperger, AV and Gardiner, GE and O'Doherty, JV and

Lynch, PB and Lawlor, PG (2013) 'Effect of weaning age and postweaning feeding

programme on the growth performance of pigs to 10 weeks of age'. Livestock Science.

Moroney, NC and O'Grady, MN and O'Doherty, JV and Kerry, JP (2013) 'Effect of a

brown seaweed (< i> Laminaria digitata) extract containing laminarin and fucoidan on

the quality and shelf-life of fresh and cooked minced pork patties'. Meat science.

Walsh, AM and Sweeney, T and O'Shea, CJ and Doyle, DN and O'Doherty, JV and

others (2013) 'Effect of dietary laminarin and fucoidan on selected microbiota, intestinal

morphology and immune status of the newly weaned pig'. Br J Nutr, 26:1-9.

Murphy P, Dal Bello F, O'Doherty J, Arendt EK, Sweeney T, Coffey A (2013) 'Analysis

of bacterial community shifts in the gastrointestinal tract of pigs fed diets supplemented

with β-glucan from Laminaria digitata, Laminaria hyperborea and Saccharomyces

cerevisiae'. Animal, 7 (7):1079-1087.

Murphya P, Dal Bello F, O'Doherty J, Arendt EK, Sweeney T, Coffey A (2013) 'The

effects of liquid versus spray-dried Laminaria digitata extract on selected bacterial

groups in the piglet gastrointestinal tract (GIT) microbiota'. Anaerobe, 21:1-8.

O'Shea, CJ and Sweeney, T. and Bahar, B. and Ryan, MT and Thornton, K. and

O'Doherty, JV (2012) 'Indices of gastrointestinal fermentation and manure emissions of

growing-finishing pigs as influenced through singular or combined consumption of

Lactobacillus plantarum and inulin'. Journal of Animal Science, 90 (11):3848-3857.

Murphy, P. and Bello, F.D. and O'Doherty, J. and Arendt, E.K. and Sweeney, T. and

Coffey, A. (2012) 'Effects of cereal beta-glucans and enzyme inclusion on the porcine

gastrointestinal tract microbiota'. Anaerobe.

Professor Colm O'Donnell

M. Zhao, C.P. O'Donnell, G. Downey (2013) 'Detection of offal adulteration in

beefburgers using near infrared reflectance spectroscopy and multivariate modelling'.

Journal of Near Infrared Spectroscopy, 21 (4):237-248.

S.Kadam, B. Tiwari, C.P. O'Donnell (2013) 'Application of Novel Extraction

Technologies for Bioactives from Marine Algae'. Journal of Agricultural and Food

Chemistry, 61 (20):4667-4675.

U. Tiwari, E. Cummins, N Brunton, C. O'Donnell, E Gallagher (2013) 'A comparison of

oat flour and oat bran-based bread formulations'. British Food Journal, 115 (2-3):300-

313.

L.Agelet, A. Gowen, C.Hurburgh Jr. and C.P. O'Donnell (2012) 'Feasibility of

conventional and Roundup Ready soybeans discrimination by different near infrared

reflectance technologies'. Food Chemistry, 134 (2):1165-1172.

Esquerre C., Gowen A., Downey G. and O'Donnell, C.P. (2012) 'Wavelength selection

for development of a near infrared imaging system for early detection of bruise damage

in mushrooms (Agaricus bisporus)'. Journal of Near Infrared Spectroscopy, 20 (5):537-

546.

Professor Dolores O'Riordan

Harbourne, N. and Marete, E. and Jacquier, J.C. and O'Riordan, D. (2013) 'Stability of

phytochemicals as sources of anti-inflammatory nutraceuticals in beverages - A review'.

Food Research International, 50 (2):480-486.

Marete, EN,Jacquier, JC,O'Riordan, D (2013) 'Effect of processing temperature on the

stability of parthenolide in acidified feverfew infusions'. Food Research International,

50:593-596.

Drummond, EM,Harbourne, N,Marete, E,Martyn, D,Jacquier, JC,O'Riordan, D,Gibney,

ER (2013) 'Inhibition of Proinflammatory Biomarkers in THP1 Macrophages by

Polyphenols Derived From Chamomile, Meadowsweet and Willow bark'. Phytotherapy

research: PTR, 27:588-594.

Dr Aifric O'Sullivan

O'Sullivan A, Armstrong P, Schuster GU, Pedersen TL, Allayee H, Stephensen CB,

Newman JW (2013) 'Habitual Diets Rich in Dark-Green Vegetables Are Associated

with an Increased Response to omega-3 Fatty Acid Supplementation in Americans of

African Ancestry'. Journal of Nutrition.

O'Sullivan A, He X, McNiven EM, Haggarty NW, Lönnerdal B, Slupsky CM (2013)

'Early diet impacts infant rhesus gut microbiome, immunity, and metabolism'. Journal of

Proteome Research, 12 (6):2833-2845.

O'Sullivan A, He X, McNiven EM, Hinde K, Haggarty NW, Lonnerdal B, Slupsky CM

(2013) 'Metabolomic phenotyping validates the infant Rhesus Monkey as a model of

human infant metabolism'. Journal of Pediatric Gastroenterology and Nutrition, 56

(4):355-63.

Neal CM, Hunter AM, Brennan L, O'Sullivan A, Hamilton DL, De Vito G, Galloway

SD (2013) 'Six weeks of a polarized training-intensity distribution leads to greater

physiological and performance adaptations than a threshold model in trained cyclists'.

Journal of Applied Physiology, 114 (4):461-471.

O'Sullivan A, Willoughby RE, Mishchuk D, Alcarraz B, Cabezas-Sanchez C, Condori

RE, David D, Encarnacion R, Fatteh N, Fernandez J, Franka R, Hedderwick S,

McCaughey C, Ondrush J, Paez-Martinez A, Rupprecht C, Velasco-Villa A, Slupsky

CM (2012) 'Metabolomics of cerebrospinal fluid from humans treated for rabies'.

Journal of Proteome Research.

Mr Mick O'Sullivan

Contini C, lvarez, R, O'Sullivan M, Dowling D, Gargan S, and Monahan FJ. (2013)

'Effect of an active packaging with Citrus extract on lipid oxidation and sensory quality

of cooked turkey meat'. Meat Science.

Contini C, Valzacchi S, O'Sullivan M, Simoneau C, Dowling DP and Monahan FJ

(2013) 'Overall Migration and Kinetics of Release of Antioxidant Compounds from

Citrus Extract-Based Active Packaging'. Journal of Agricultural and Food Chemistry.

Dr Karina Pierce

Boland, T.M., Quinlan, C., Pierce, K.M., Lynch, M.B., Kelly, A.K and Purcell, P. J.

(2013) 'The effect of pasture pre-grazing herbage mass on methane emissions, ruminal

fermentation, and average daily gain of grazing beef heifers'. Journal of Animal Science,

91:3867-3874.

T. M. Boland, C. Quinlan, K. M. Pierce, M. B. Lynch, A. K. Kelly and P. J. Purcell

(2013) 'The effect of pasture pre-grazing herbage mass on methane emissions, ruminal

fermentation, and average daily gain of grazing beef heifers'. Livestock Science.

B. McCarthy, L.Delaby, K.M Pierce, A. Brennan and B.Horan (2013) 'The effect of

stocking rate and calving date on milk production of Holstein Friesian dairy cows'.

Livestock Science.

McDonald, R., K.M. Pierce, R. Fealy, B. Horan (2013) 'Characteristics, intentions and

expectations of new entrant dairy farmers entering the Irish dairy industry through the

New Entrant Scheme'. International Journal of Agricultural Management.

Al Ibrahim, R. M., Whelan, S. J., Pierce, K. M., Campion, D. P., Gath, V. P., Mulligan,

F. J. (2013) 'Effect of timing of post-partum introduction to pasture and supplementation

with Saccharomyces cerevisiae on milk production, metabolic status, energy balance and

some reproductive parameters in early lactation dairy cows'. Journal Of Animal

Physiology And Animal Nutrition, 97:105-114.

Whelan, S. J., Mulligan, F. J., Callan, J. J., Flynn, B., Pierce, K. M. (2013) 'Effect of

forage source and a supplementary methionine hydroxyl analogue on rumen

fermentation parameters in lactating dairy cows offered a low crude protein diet'. Animal

Feed Science and Technology, 183:62-66.

McDonald, R., L. Shalloo, K.M. Pierce, B. Horan. 2013 (2013) 'Evaluating expansion

strategies for start-up European Union dairy farm businesses'. Journal of Dairy Science.

Meade, G., Pierce, K., O'Doherty, J.V., Mueller, C., Hepp, S., Lanigan, G. and Mc Cabe,

T. (2012) 'Gaseous emissions of methane and carbon dioxide following land application

of high and low nitrogen pig manures to winter wheat at three key crop growth stages'.

Journal of Agricultural Science.

Professor Helen Roche

Phillips CM, Tierney AC, Perez-Martinez P, Defoort C, Blaak EE, Gjelstad IM, Lopez-

Miranda J, Kiec-Klimczak M, Malczewska-Malec M, Drevon CA, Hall W, Lovegrove

JA, Karlstrom B, Risérus U, Roche HM. (2013) 'Obesity and Body Fat Classification in

the Metabolic Syndrome: Impact on Cardiometabolic Risk Metabotype'. Obesity,.

Camargo A, Rangel-Zúñiga OA, Peña-Orihuela P, Marín C, Pérez-Martínez P, Delgado-

Lista J, Gutierrez-Mariscal FM, Malagón MM, Roche HM, Tinahones FJ, Lopez-

Miranda J. (2013) 'Postprandial changes in the proteome are modulated by dietary fat in

patients with metabolic syndrome'. Journal of Nutritional Biochemistry, 24:318-324.

Morris C, Gibney M, Roche H, Ryan M, Grada O, De Vito G, Gibney E, Brennan L

(2013) 'The relationship between aerobic fitness level and metabolic profiles in healthy

adults'. Molecular Nutrition and Food Research.

Perez-Martinez P, Garcia-Rios A, Delgado-Lista J, Gjelstad IM, Gibney J, Kieć-Wilk B,

Camargo A, Helal O, Karlström B, Blaak EE, Hall W, Risérus U, Dembińska-Kieć A,

Defoort C, Saris WH, Lovegrove JA, Drevon CA, Roche HM, Lopez-Miranda J. (2013)

'Gene-nutrient interactions on the phosphoenolpyruvate carboxykinase influence insulin

sensitivity in metabolic syndrome subjects'. Clinical Nutrition, Aug;32(4):630-5 :630-

635.

Camargo A, Meneses ME, Perez-Martinez P, Delgado-Lista J, Jimenez-Gomez Y, Cruz-

Teno C, Tinahones FJ, Paniagua JA, Perez-Jimenez F, Roche HM, Malagon MM,

Lopez-Miranda J (2013) 'Dietary fat differentially influences the lipids storage on the

adipose tissue in metabolic syndrome patients'. The Journal of nutrition.

Morris C, O'Grada C, Ryan M, Roche HM, Gibney MJ, Gibney ER, Brennan L (2013)

'Identification of differential responses to an oral glucose tolerance test in healthy

adults'. PLoS ONE, 8 (8).

McAllan L, Keane D, Schellekens H, Roche HM, Korpela R, Cryan JF, Nilaweera KN.

(2013) 'Whey protein isolate counteracts the effects of a high-fat diet on energy intake

and hypothalamic and adipose tissue expression of energy balance-related genes'. British

Journal of Nutrition, 4:1-13.

Yubero-Serrano EM, Delgado-Lista J, Peña-Orihuela P, Perez-Martinez P, Fuentes F,

Marin C, Tunez I, Tinahones FJ, Perez-Jimenez F, Roche HM, Lopez-Miranda J (2013)

'Oxidative stress is associated with the number of components of metabolic syndrome:

LIPGENE study'. Experimental & molecular medicine, 45.

Morine MJ, Toomey S, McGillicuddy FC, Reynolds CM, Power KA, Browne JA,

Loscher C, Mills KH, Roche HM. (2013) 'Network analysis of adipose tissue gene

expression highlights altered metabolic and regulatory transcriptomic activity in high-

fat-diet-fed IL-1RI knockout mice'. Journal of Nutritional Biochemistry, 24:788-799.

Phelan, N,O'Connor, A,Tun, TK,Correia, N,Boran, G,Roche, HM,Gibney, J (2013)

'Leucocytosis in women with polycystic ovary syndrome (PCOS) is incompletely

explained by obesity and insulin resistance'. Clinical Endocrinology, 78:107-113.

Ryan, MF,Grada, CO,Morris, C,Segurado, R,Walsh, MC,Gibney, ER,Brennan,

L,Roche, HM,Gibney, MJ (2013) 'Within-person variation in the postprandial lipemic

response of healthy adults'. American Journal of Clinical Nutrition, 97:261-267.

Reynolds, CM,Toomey, S,McBride, R,McMonagle, J,Morine, MJ,Belton, O,Moloney,

AP,Roche, HM (2013) 'Divergent effects of a CLA-enriched beef diet on metabolic

health in ApoE(-/-) and ob/ob mice'. J Nutr Biochem, 24:401-411.

McArdle MA, Finucane OM, Connaughton RM, McMorrow AM, Roche HM (2013)

'Mechanisms of obesity-induced inflammation and insulin resistance: insights into the

emerging role of nutritional strategies'. Frontiers in endocrinology, 4.

Finucane OM, Reynolds CM, McGillicuddy FC, Roche HM (2012) 'Insights into the

role of macrophage migration inhibitory factor in obesity and insulin resistance'. The

Proceedings of the Nutrition Society, 71 (4):622-633.

Borgeson, E., McGillicuddy, F. C., Harford, K. A., Corrigan, N., Higgins, D. F.,

Maderna, P., Roche, H. M., Godson, C. (2012) 'Lipoxin A4 attenuates adipose

inflammation'. FASEB J, 26 (10):4287-94.

Allott EH, Oliver E, Lysaght J, Gray SG, Reynolds JV, Roche HM, Pidgeon GP (2012)

'The SGBS cell strain as a model for the in vitro study of obesity and cancer'. Clinical &

translational oncology: official publication of the Federation of Spanish Oncology

Societies and of the National Cancer Institute of Mexico, 14 (10):774-782.

Oliver E, McGillicuddy FC, Harford KA, Reynolds CM, Phillips CM, Ferguson JF,

Roche HM (2012) 'Docosahexaenoic acid attenuates macrophage-induced inflammation

and improves insulin sensitivity in adipocytes-specific differential effects between LC n-

3 PUFA'. The Journal of nutrition, 23 (9):1192-1200.

Dr Amalia Scannell

Crofton, E.C., Markey, A., Scannell, A.G.M. (2013) 'Consumers' expectations and needs

towards healthy cereal based snacks: An exploratory study among Irish adults'. British

Food Journal, 115 (8):1130--1148.

O'Brien, S.A., Feeney, E.L., Scannell, A.G.M., Markey, A., Gibney, E.R. (2013) 'Bitter

taste perception and dietary intake patterns in Irish children'. Journal Of Nutrigenetics

And Nutrigenomics, 6 (1):43-58.

Ktenioudaki, A., Crofton, E., Scannell, A.G.M., Hannon, J.A., Kilcawley, K.N.,

Gallagher, E. (2013) 'Sensory properties and aromatic composition of baked snacks

containing brewer's spent grain'. Journal of cereal science, 57 (3):384-390.

Feng, Y.-Z., Elmasry, G., Sun, D.-W., Scannell, A.G.M., Walsh, D., Morcy, N. (2013)

'Near-infrared hyperspectral imaging and partial least squares regression for rapid and

reagentless determination of Enterobacteriaceae on chicken fillets'. Food Chemistry, 138

(2-3):1829--1836.

Professor Da-Wen Sun

Feng, Y.-Z., Elmasry, G., Sun, D.-W., Scannell, A.G.M., Walsh, D., Morcy, N. (2013)

'Near-infrared hyperspectral imaging and partial least squares regression for rapid and

reagentless determination of Enterobacteriaceae on chicken fillets'. Food Chemistry, 138

(2-3):1829--1836.

Professor Torres Sweeney

Murphy, P and Dal Bello, F and O'Doherty, J and Arendt, EK and Sweeney, T and

Coffey, A (2013) 'Analysis of bacterial community shifts in the gastrointestinal tract of

pigs fed diets supplemented with $\beta$-glucan from Laminaria digitata, Laminaria

hyperborea and Saccharomyces cerevisiae'. animal, :1-9.

Walsh, AM and Sweeney, T and O'Shea, CJ and Doyle, DN and O'Doherty, JV and

others (2013) 'Effect of dietary laminarin and fucoidan on selected microbiota, intestinal

morphology and immune status of the newly weaned pig'. Br J Nutr, 26:1-9.

Hamill RM, Aslan O, Mullen AM, O'Doherty JV, McBryan J, Morris DG, Sweeney T

(2013) 'Transcriptome analysis of porcine M. semimembranosus divergent in

intramuscular fat as a consequence of dietary protein restriction'. Genomics, 14.

Murphy P, Dal Bello F, O'Doherty J, Arendt EK, Sweeney T, Coffey A (2013) 'Analysis

of bacterial community shifts in the gastrointestinal tract of pigs fed diets supplemented

with β-glucan from Laminaria digitata, Laminaria hyperborea and Saccharomyces

cerevisiae'. Animal, 7 (7):1079-1087.

Murphya P, Dal Bello F, O'Doherty J, Arendt EK, Sweeney T, Coffey A (2013) 'The

effects of liquid versus spray-dried Laminaria digitata extract on selected bacterial

groups in the piglet gastrointestinal tract (GIT) microbiota'. Anaerobe, 21:1-8.

Walsh AM, Sweeney T, O'Shea CJ, Doyle DN, O'Doherty JV (2013) 'Effect of dietary

laminarin and fucoidan on selected microbiota, intestinal morphology and immune

status of the newly weaned pig'. The Journal of nutrition:1-9.

Monaghan ì Byrne B, Fanning S, Sweeney T, McDowell D, Bolton DJ (2013) 'Serotypes

and virulence profiles of atypical enteropathogenic Escherichia coli (EPEC) isolated

from bovine farms and abattoirs'. Journal of Applied Microbiology, 114 (2):595-603.

Walsh, AM,Sweeney, T,Bahar, B,Flynn, B,O'Doherty, JV (2013) 'The effects of

supplementing varying molecular weights of chitooligosaccharide on performance,

selected microbial populations and nutrient digestibility in the weaned pig'. Animal,

7:571-579.

Bahar, B,O'Doherty, JV,O'Doherty, AM,Sweeney, T (2013) 'Chito-Oligosaccharide

Inhibits the De-Methylation of a 'CpG' Island within the Leptin (LEP) Promoter during

Adipogenesis of 3T3-L1 Cells'. PLoS ONE, 8.

Bahar B, O'Doherty JV, O'Doherty AM, Sweeney T (2013) 'Chito-oligosaccharide

inhibits the de-methylation of a 'CpG' island within the leptin (LEP) promoter during

adipogenesis of 3T3-L1 cells'. PLoS ONE, 8 (3).

Walsh AM, Sweeney T, Bahar B, O'Doherty JV (2013) 'Multi-functional roles of

chitosan as a potential protective agent against obesity'. PLoS ONE, 8 (1).

Mukhopadhya A, O'Doherty JV, Smith A, Bahar B, Sweeney T. (2012) 'The

microbiological and immunomodulatory effects of spray-dried versus wet dietary

supplementation of seaweed extract in the pig gastrointestinal tract'. Journal of Animal

Science, 90 (4):28-30.

Monaghan A, Byrne B, Fanning S, Sweeney T, McDowell D, Bolton DJ (2012)

'Serotypes and virulotypes of non-O157 shiga-toxin producing Escherichia coli (STEC)

on bovine hides and carcasses'. Food Microbiology, 32 (2):223-229.

Hamill RM, McBryan J, McGee C, Mullen AM, Sweeney T, Talbot A, Cairns MT,

Davey GC (2012) 'Functional analysis of muscle gene expression profiles associated

with tenderness and intramuscular fat content in pork'. Meat Sci, 92 (4):440-450.

Hamill, R.M., McBryan, J., McGee, C., Mullen, A.M., Sweeney, T., Talbot, A., Cairns,

M.T., Davey, G.C. (2012) 'Functional analysis of muscle gene expression profiles

associated with tenderness and intramuscular fat content in pork'. Meat Science, 92

(4):440-450.

Monaghan, n, Byrne, B., Fanning, S., Sweeney, T., McDowell, D., Bolton, D.J. (2012)

'Serotypes and virulotypes of non-O157 shiga-toxin producing Escherichia coli (STEC)

on bovine hides and carcasses'. Food microbiology, 32 (2):223-229.

Ryan MT, O'Shea CJ, Collins CB, O'Doherty JV, Sweeney T (2012) 'Effects of dietary

supplementation with Laminaria hyperborea, Laminaria digitata, and Saccharomyces

cerevisiae on the IL-17 pathway in the porcine colon'. Journal of Animal Science, 90

Suppl 4:263-265.

Ryan MT, Collins CB, O'Doherty JV, Sweeney T (2012) 'Effects of dietary Beta-glucans

supplementation on cytokine expression in porcine liver'. Journal of animal science, 90

Suppl 4:40-42.

Bahar B, O'Doherty JV, Hayes M, Sweeney T (2012) 'Extracts of brown seaweeds can

attenuate the bacterial lipopolysaccharide-induced pro-inflammatory response in the

porcine colon ex vivo'. Journal of Animal Science, 90 Suppl 4:46-48.

Mukhopadhya A, O'Doherty JV, Smith A, Bahar B, Sweeney T (2012) 'The

microbiological and immunomodulatory effects of spray-dried versus wet dietary

supplementation of seaweed extract in the pig gastrointestinal tract'. Journal of Animal

Science, 90 Suppl 4:28-30.

Bahar B, O'Doherty JV, Sweeney T (2012) 'Assessment of RNA integrity in the

postmortem pig colonic tissue ex vivo'. Journal of Animal Science, 90 Suppl 4:22-24.

O'Shea CJ, Sweeney T, Bahar B, Ryan MT, Thornton K, O'Doherty JV (2012) 'Indices

of gastrointestinal fermentation and manure emissions of growing-finishing pigs as

influenced through singular or combined consumption of Lactobacillus plantarum and

inulin'. Journal of Animal Science, 90 (11):3848-3857.

O'Shea, CJ and Sweeney, T. and Bahar, B. and Ryan, MT and Thornton, K. and

O'Doherty, JV (2012) 'Indices of gastrointestinal fermentation and manure emissions of

growing-finishing pigs as influenced through singular or combined consumption of

Lactobacillus plantarum and inulin'. Journal of Animal Science, 90 (11):3848-3857.

Walsh, A.M., Sweeney, T., Bahar, B., Flynn, B., O'Doherty, J.V. (2012) 'The effect of

chitooligosaccharide supplementation on intestinal morphology, selected microbial

populations, volatile fatty acid concentrations and immune gene expression in the

weaned pig'. Animal, 6 (10):1620-1626.

Sweeney T, Collins CB, Reilly P, Pierce KM, Ryan M, O'Doherty JV (2012) 'Effect of

purified Beta-glucans derived from Laminaria digitata, Laminaria hyperborea and

Saccharomyces cerevisiae on piglet performance, selected bacterial populations, volatile

fatty acids and pro-inflammatory cytokines in the gastrointestinal tract of pigs'. Journal

of Nutrition, 108 (7):1226-1234.

Murphy, P. and Bello, F.D. and O'Doherty, J. and Arendt, E.K. and Sweeney, T. and

Coffey, A. (2012) 'Effects of cereal beta-glucans and enzyme inclusion on the porcine

gastrointestinal tract microbiota'. Anaerobe.

Walsh AM, Sweeney T, Bahar B, Flynn B, O'Doherty JV (2012) 'The effect of

chitooligosaccharide supplementation on intestinal morphology, selected microbial

populations, volatile fatty acid concentrations and immune gene expression in the

weaned pig'. Animal, 6 (10):1620-1626.

Walsh AM, Sweeney T, Bahar B, Flynn B, O'Doherty JV (2012) 'The effects of

supplementing varying molecular weights of chitooligosaccharide on performance,

selected microbial populations and nutrient digestibility in the weaned pig'. Animal,:1-9.

Murphy P, Bello FD, O'Doherty JV, Arendt EK, Sweeney T, Coffey A (2012) 'Effects of

cereal β-glucans and enzyme inclusion on the porcine gastrointestinal tract microbiota'.

Anaerobe.

Professor Patrick Gerard Wall

Rutsaert, P,Regan, A,Pieniak, Z,McConnon, A,Moss, A,Wall, P,Verbeke, W (2013)

'The use of social media in food risk and benefit communication'. Trends in Food

Science & Technology, 30:84-91.

Dr Paul Whyte

Haughton, P.N., Lyng, J., Fanning, S., Whyte, P. (2013) 'Potential of a commercially

available water acidification product for reducing Campylobacter in broilers prior to

slaughter'. Poultry Science, 54:319-324.

Thomas, K.M., McCann, M.S., Collery, M.M., Whyte, P., McDowell, D.A., Duffy, G.

(2013) 'Transfer of verocytotoxigenic Escherichia coli O157, O26, O111, O103 and

O145 from fleece to carcass during sheep slaughter in an Irish export abattoir'. Food

Microbiology, 34:38-45.

Halpin, R.M., Cregenzan-Alberti, O., Whyte, P., Lyng, J.G., Noci, F. (2013) 'Combined

treatment with mild heat, manothermosonication and pulsed electric fields reduces

microbial growth in milk'. Food Control, 34:364-371.

Thomas, KM,McCann, MS,Collery, MM,Moschonas, G,Whyte, P,McDowell,

DA,Duffy, G (2013) 'Transfer of verocytotoxigenic Escherichia coli O157, O26, O111,

O103 and O145 from fleece to carcass during sheep slaughter in an Irish export abattoir'.

Food Microbiology, 34:38-45.

Haughton, P.N., Lyng, J., Cronin, D., Morgan, D., Fanning, S., Whyte, P. (2012)

'Susceptibility of Campylobacter to high intensity near ultraviolet/visible 3955nm light

and its effectiveness for the decontamination of raw chicken and contact surfaces'.

International Journal of Food Microbiology, 159 (3):267-273. Back to Top

Other Journals

Dr Karina Pierce

Whelan, S. J., Mulligan, F. J., Pierce, K. M (2013) 'Nitrogen efficiency in contrasting

dairy production systems' Advances in Animal Biosciences.

Pierce, K. M., Al Ibrahim, R. M., Palladino, R. A., Whelan, S. J., Mulligan, F. J. (2013)

'Short Communication: Effect of timing of introduction to pasture post calving and

supplementation with Saccharomyces cerevisiae on milk fatty acid profiles in early

lactation dairy cows' Food and Nutritional Sciences .

Professor Patrick Gerard Wall

Shan, C; Regan, A; De Brun, A; Barnett, J; van der Sanden, M; Wall, P; McConnon, A

(2013) 'Food crisis coverage by social and traditional media: A case study of the 2008

Irish dioxin crisis' Public Understanding of Science.

Back to Top

Conference Publications

Dr Enda Cummins

Cummins E. (2012) Nanotechnologies in the food industry Global Food Safety -

Solutions for today and tomorrow, 5

Professor Séamus Fanning

Burns A., Shore A., Gibbons J., McManus B., Abbott Y., Markey B., Murphy A.,

Coleman D., Fanning S., Gutierrez M., Egan J., Leonard F.. (2013) Methicillin-resistant

and susceptible Staphylococcus aureus in pig herds in Ireland Society for General

Microbiology, Dublin,

Dr Kevin McDonnell

Ger Devlin and Radomir Klvac (2013) Opportunities for developing excavator based

cable logging operations in Ireland - A productivity analysis Forest Operations in

Mountaineous Conditions - IUFRO 3.06, Oslo, Norway,

Ger Devlin (2013) Bioenergy - Strategies and obstacles - How to reach 2020 targets

Mendel University (guest lecturer), Mendel University, Brno, Czech Republic,

Professor Frank Monahan

Monahan FJ, Moloney AP and Schmidt O. (2013) Meat authentication: determination of

the dietary background and geographical origin of meats 50th Annual Meeting of the

Brazilian Society of Animal Science, Campinas, Brazil,

Monahan FJ, Moloney AP and Schmidt O (2013) Authenticity and traceability of

grassland production and products . In: JLP Daniel, MC Santos, LG Nussio eds. 3rd

International Symposium on Forage Quality and Conservation, Campinas, Brazil, 169 -

190

Professor Shane Ward

Ger Devlin and Radomir Klvac (2013) Opportunities for developing excavator based

cable logging operations in Ireland - A productivity analysis Forest Operations in

Mountaineous Conditions - IUFRO 3.06, Oslo, Norway,

Ger Devlin (2013) Bioenergy - Strategies and obstacles - How to reach 2020 targets

Mendel University (guest lecturer), Mendel University, Brno, Czech Republic,

Corkery, G.; Ward, S.; Kenny, C; Hemmingway, P. (2013) Monitoring environmental

parameters in poultry production facilities Computer Aided Process Engineering - CAPE

Forum 2013,

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Other Publications

Dr Lorraine Brennan

Lindsay, KL,Walsh, CA,Brennan, L,McAuliffe, FM (2013) Probiotics in pregnancy and

maternal outcomes: a systematic review. Reviews.

Professor John O'Doherty

O'sullivan, J.T. and Gallagher, M. and O'doherty, J. and Sweeney, T. (2012) The

Improvement of Gastrointestinal Health, Immunity and Performance by Dietary

Intervention. .

Professor Dolores O'Riordan

Harbourne, N,Marete, E,Jacquier, JC,O'Riordan, D (2013) Stability of phytochemicals as

sources of anti-inflammatory nutraceuticals in beverages - A review. Reviews.

Professor Helen Roche

McAllan, L,Cotter, PD,Roche, HM,Korpela, R,Nilaweera, KN (2013) Impact of leucine

on energy balance. Reviews.

Professor Torres Sweeney

O'sullivan, J.T. and Gallagher, M. and O'doherty, J. and Sweeney, T. (2012) The

Improvement of Gastrointestinal Health, Immunity and Performance by Dietary

Intervention. .

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