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PUBLICATIONS ON OMNIGRID MICROARRAYERS. (2000 – DEC 2018). 2018. Selectin ligands useful in the diagnosis and treatment of cancer. Inventors: Konstantinos Konstantopoulos, and Susan Napier Thomas. United States Patent: US 9855349 B2, Publication Date: 2 January 2018. https://patents.google.com/patent/US9855349B2/en Method for nucleotide detection. Inventors: Kay Klausing, Min-Jui Richard Shen, John Moore, Vincent Peter Smith, and Kevin Hall. United States Patent: US 9856529 B2, Publication Date: 2 January 2018. https://patents.google.com/patent/US9856529B2/en Impaired IFN-α-mediated signal in dendritic cells differentiates active from latent tuberculosis. Stefania Parlato, Teresa Chiacchio, Debora Salerno, Linda Petrone, Luciano Castiello, Giulia Romagnoli, Irene Canini, Delia Goletti, and Lucia Gabriele. PLoS One, 10 January 2018; 13(1): e0189477; 18 pp. https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5761858/pdf/pone.0189477.pdf Methods for making arrays for high throughput proteomics. Inventors: Philip Felgner, Huw Davies, and Xiaowu Ling. U.S. Patent Application: 2018/0016299 A1, Publication Date: 18 January 2018; (OmniGrid 100) https://patents.google.com/patent/US20180016299A1/en Antibody Profiling by Proteome Microarray with Multiplex Isotype Detection Reveals Overlap between Human and Aotus nancymaae Controlled Malaria Infections. Omid Taghavian, Aarti Jain, Chester J. Joyner, Sunny Ketchum, Rie Nakajima, Algis Jasinskas, Li Liang, Rich Fong, Christopher King, Bryan Greenhouse, Maxwell Murphy, Jason Bailey, Mary R. Galinski, John W. Barnwell, Christopher V. Plowe, D. Huw Davies, Philip L. Felgner Proteomics, January 2018; 18(2): 201700277. (OmniGrid 100) Unravelling the immune signature of Plasmodium falciparum transmission-reducing immunity. Will JR Stone, Joseph J. Campo, André Lin Ouédraogo, Lisette Meerstein-Kessel, Isabelle Morlais, Dari Da, Anna Cohuet, Sandrine Nsango, Colin J. Sutherland, Marga van de Vegte-Bolmer, Rianne Siebelink- Stoter, Geert-Jan van Gemert, Wouter Graumans, Kjerstin Lanke, Adam D. Shandling, Jozelyn V. Pablo, Andy A. Teng, Sophie Jones, Roos M. de Jong, Amanda Fabra-García, John Bradley, Will Roeffen, Edwin Lasonder, Giuliana Gremo, Evelin Schwarzer, Chris J. Janse, Susheel K. Singh, Michael Theisen, Phil Felgner, Matthias Marti, Chris Drakeley, Robert Sauerwein, Teun Bousema, and Matthijs M. Jore Nature Communications, 8 February 2018; 9(1): 558, 14 pp. (OmniGrid Accent) https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5805765/pdf/41467_2017_Article_2646.pdf
Transcript of digilabglobal.com · PUBLICATIONS ON OMNIGRID MICROARRAYERS. (2000 – DEC 2018). 2018. Selectin...
PUBLICATIONS ON OMNIGRID MICROARRAYERS. (2000 – DEC 2018). 2018. Selectin ligands useful in the diagnosis and treatment of cancer. Inventors: Konstantinos Konstantopoulos, and Susan Napier Thomas. United States Patent: US 9855349 B2, Publication Date: 2 January 2018. https://patents.google.com/patent/US9855349B2/en Method for nucleotide detection. Inventors: Kay Klausing, Min-Jui Richard Shen, John Moore, Vincent Peter Smith, and Kevin Hall. United States Patent: US 9856529 B2, Publication Date: 2 January 2018. https://patents.google.com/patent/US9856529B2/en Impaired IFN-α-mediated signal in dendritic cells differentiates active from latent tuberculosis. Stefania Parlato, Teresa Chiacchio, Debora Salerno, Linda Petrone, Luciano Castiello, Giulia Romagnoli, Irene Canini, Delia Goletti, and Lucia Gabriele. PLoS One, 10 January 2018; 13(1): e0189477; 18 pp. https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5761858/pdf/pone.0189477.pdf Methods for making arrays for high throughput proteomics. Inventors: Philip Felgner, Huw Davies, and Xiaowu Ling. U.S. Patent Application: 2018/0016299 A1, Publication Date: 18 January 2018; (OmniGrid 100) https://patents.google.com/patent/US20180016299A1/en Antibody Profiling by Proteome Microarray with Multiplex Isotype Detection Reveals Overlap between Human and Aotus nancymaae Controlled Malaria Infections. Omid Taghavian, Aarti Jain, Chester J. Joyner, Sunny Ketchum, Rie Nakajima, Algis Jasinskas, Li Liang, Rich Fong, Christopher King, Bryan Greenhouse, Maxwell Murphy, Jason Bailey, Mary R. Galinski, John W. Barnwell, Christopher V. Plowe, D. Huw Davies, Philip L. Felgner Proteomics, January 2018; 18(2): 201700277. (OmniGrid 100) Unravelling the immune signature of Plasmodium falciparum transmission-reducing immunity. Will JR Stone, Joseph J. Campo, André Lin Ouédraogo, Lisette Meerstein-Kessel, Isabelle Morlais, Dari Da, Anna Cohuet, Sandrine Nsango, Colin J. Sutherland, Marga van de Vegte-Bolmer, Rianne Siebelink-Stoter, Geert-Jan van Gemert, Wouter Graumans, Kjerstin Lanke, Adam D. Shandling, Jozelyn V. Pablo, Andy A. Teng, Sophie Jones, Roos M. de Jong, Amanda Fabra-García, John Bradley, Will Roeffen, Edwin Lasonder, Giuliana Gremo, Evelin Schwarzer, Chris J. Janse, Susheel K. Singh, Michael Theisen, Phil Felgner, Matthias Marti, Chris Drakeley, Robert Sauerwein, Teun Bousema, and Matthijs M. Jore Nature Communications, 8 February 2018; 9(1): 558, 14 pp. (OmniGrid Accent) https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5805765/pdf/41467_2017_Article_2646.pdf
Methods and Compositions For The Diagnosis And Treatment Of Cancer and Autoimmune Disorders. Inventors: Xiaowu Liang, Douglas Molina, and William Morrow. U.S. Patent Application: 2018/0045735 A1, Publication Date: 15 February 2018. (OmniGrid Accent) https://patents.google.com/patent/US20180045735A1/en The Immunome of Colon Cancer: Functional In Silico Analysis of Antigenic Proteins Deduced from IgG Microarray Profiling. Johana A. Luna Coronell, Khulan Sergelen, Philipp Hofer, István Gyurján, Stefanie Brezina, Peter Hettegger, Gernot Leeb, Karl Mach, Andrea Gsur, and Andreas Weinhäusel. Genomics, Proteomics & Bioinformatics, February 2018; 16(1): 73-84. https://www.sciencedirect.com/science/article/pii/S1672022918300081?via%3Dihub Methods and compositions involving lincRNA and leukemia. Inventors: Ella Waters, Norma I. Rodriguez-Malave, and Thilini Fernando. United States Patent: US 9909188 B2, Publication Date: 6 March 2018; https://patents.google.com/patent/US9909188B2/en Label-free biosensors in the field of stem cell biology. Farzaneh Fathi, Reza Rahbarghazi, and Mohammad-Reza Rashidi. Biosensors and Bioelectronics, 15 March 2018; 101: 188-198 An Automated Microfluidic DNA Microarray Platform for Genetic Variants Detection in Inherited Arrhythmic Diseases. Shu-Hong Huang, Yu-Shin Chang, Jyh-Ming Jimmy Juang, Kai-Wei Chang, Mong-Hsun Tsai, Tzu-Pin Lu, Liang-Chuan Lai, Eric Y. Chuang, and Nien-Tsu Huang. Analyst, 21 March 2018; 143(6): 1367-1377 Fluorescent Neomannosyl Bovine Serum Albumin as Efficient Probe for Mannose Receptor Imaging and MCF-7 Cancer Cell Targeting. Yang Yang, Tian-Wei Jia, Fei Xu, Wei Li, Shun Tao, Li-Qiang Chu, Yun He, Yu Li, Suri S. Iyer, and Peng Yu ACS Applied Nano Materials, 23 March 2018; 1(3): 1058–1065. Label-Free Biosensors in the Field of Stem Cell Biology. Farzaneh Fathi, Reza Rahbarghazi, and Mohammad-Reza Rashidi. Biosensors and Bioelectronics, March 2018; 101: 188-198. Method for nucleotide detection. Inventors: Kay Klausing, Min-Jui Richard Shen, John Moore, Vincent Peter Smith, and Kevin Hall. U.S. Patent Application: 2018/0100193 A1, Publication Date: 12 April 2018. https://patents.google.com/patent/US20180100193A1/en Fluorescent Dendritic Micro-Hydrogels: Synthesis, Analysis and Use in Single-Cell Detection. Lisa Christadore, Mark W. Grinstaff, and Scott E. Schaus. Molecules, 18 April 2018; 23(4): 936, 10 pp. (OmniGridAccent) http://www.mdpi.com/1420-3049/23/4/936 Multiplexed Analyses of Test Samples.
Inventors: James R. Heil, Daniel J. Schneider, Daniel T. Nieuwlandt, Sheri K. Wilcox, Dominic Zichi, Todd Gander, Bruce Eaton, and Larry Gold. U.S. Patent Application: 2018/0156787 A1, Publication Date: 7 June 2018; (OmniGridAccent) http://www.freepatentsonline.com/y2018/0156787.html Allergen Microarrays for In Vitro Diagnostics of Allergies: Comparison with ImmunoCAP and AdvanSure. Hyunjin Jeon, Joo Hyun Jung, Yoonji Kim, Youngeun Kwon, and Seon Tae Kim. Annals of Laboratory Medicine, July 2018; 38(4): 338-347. (OmniGrid100) https://synapse.koreamed.org/DOIx.php?id=10.3343/alm.2018.38.4.338 Specific detection of stable single nucleobase mismatch using SU-8 coated silicon nanowires platform. Melania Banu, Monica Simion, Marian C. Popescu, Pericle Varasteanu, Mihaela Kusko, and Ileana C. Farcasanu. Talanta, 1 August 2018; 185: 281–290 (OmniGrid Micro + GeneTAC UC4) Human experimental challenge with enterotoxigenic Escherichia coli elicits immune responses to canonical and novel antigens relevant to vaccine development. Subhra Chakraborty, Arlo Randall, Tim J. Vickers, Doug Molina, Clayton D. Harro, Barbara DeNearing, Jessica Brubaker, David A Sack, A Louis Bourgeois, Philip L Felgner, Xiaowu Liang, Sachin Mani, Heather Wenzel, R Reid Townsend, Petra E Gilmore, Michael J Darsley David A Rasko, James M Fleckenstein The Journal of Infectious Diseases, 24 May 2018; ahead of print. (OmniGrid Accent) 2017. Devices and methods for prognosis prediction for melanoma cancer. Inventors: Michael Alan Black, Jonathan Cebon, Parry John Guilford, and Thomas John. United States Patent: US 9534258 B2, Publication Date: 3 January 2017; https://www.google.com/patents/US9534258 Methods and compositions related to miR-21 and miR-29A, exosome inhibition and cancer metastasis. Inventors: Carlo M. Croce, and Muller Fabbri. U.S. Patent Application: 2017/0002353 A1, Publication Date: 5 January 2017; (OmniGrid 100). https://patents.google.com/patent/US20170002353A1/en MicroRNA expression in human peripheral blood microvesicles and uses thereof. Inventors: Clay B. Marsh, Melissa G. Piper, and Noura Ismail. U.S. Patent Application: 2017/0009306 A1, Publication Date: 12 January 2017; (OmniGrid 100) https://www.google.com/patents/US20170009306 Estudo do perfil da resposta imune por anticorpos em diferentes formas clínicas de leptospirose a partir de um microarranjo de proteína do genoma codificante completo de Leptospira interrogans sorovar Copenhageni. Carolina Lessa Aquino PhD Theses, 16 January 2017; Instituto Oswaldo Cruz, Rio de Janeiro, 127 pp. (OmniGrid 100) https://www.arca.fiocruz.br/bitstream/icict/23568/2/carolina_aquino_ioc_dout_2017.pdf
Unit dose formulation of antidotes for factor Xa inhibitors and methods of using the same. Inventors: Uma Sinha, Genmin Lu, Athiwat Hutchaleelaha, and Stanley J. Hollenbach. U.S. Patent Application: 2017/0014492 A1, Publication Date: 19 January 2017. https://patents.google.com/patent/US20170014492A1/en Compositions and Methods for Immunodominant Antigens of Mycobacterium tuberculosis. Inventors: Philip Felgner, Xiaowu Liang, and Maria Laura Gennaro. U.S. Patent Application: 2017/0023586 A1, Publication Date: 26 January 2017; (OmniGrid 100) https://www.google.com/patents/US20170023586 Distinct antibody responses of patients with mild and severe leptospirosis determined by whole proteome microarray analysis. Carolina Lessa-Aquino, Janet C. Lindow, Arlo Randall, Elsio Wunder, Jozelyn Pablo, Rie Nakajima, Algis Jasinskas, Jaqueline S. Cruz, Alcineia O. Damião, Nívison Nery, Guilherme S. Ribeiro, Federico Costa, José E. Hagan, Mitermayer Galvão Reis, Albert I. Ko, Marco Alberto Medeiros, Philip L. Felgner PLoS Neglected Tropical Diseases, 31 January 2017; 11(1): e0005349, 17 pp. (OmniGrid 100) http://journals.plos.org/plosntds/article?rev=1&id=10.1371/journal.pntd.0005349 Suppression of allergic lung inflammation and hyperreactivity. Inventors: Reen Wu, Ching-Hsien Chen, and Chen-Chen Lee. U.S. Patent Application: 2017/0028019 A1, Publication Date: 2 February 2017; https://patents.google.com/patent/US20170028019A1/en Proteomická analýza vybraných onkohematologických onemocnění Kristýna Pimková PhD Theses, 10 February 2017; Univerzita Karlova v Praze, 235 pp. https://dspace.cuni.cz/bitstream/handle/20.500.11956/2429/RPTX_2016_1_11160_0_529267_0_186154.pdf?sequence=1 Transient Cannabinoid Receptor 2 Blockade during Immunization Heightens Intensity and Breadth of Antigen-specific Antibody Responses in young and aged mice. Emmanuel Dotsey, Irina Ushach, Egest Pone, Rie Nakajima, Algis Jasinskas, Donovan A. Argueta, Andrea Dillon, Nicholas DiPatrizio, Huw Davies, Albert Zlotnik, Peter D. Crompton, and Philip L. Felgner Scientific Reports, 17 February 2017; 7: 42584, 14 pp. (OmniGrid 100) https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5314369/ MicroRNA signatures in human ovarian cancer. Inventor: Carlo M. Croce United States Patent: US 9574239 B2, Publication Date: 21 February 2017; (OmniGrid 100) https://www.google.com/patents/US9574239 Method and system to predict response to pain treatments. Inventors: Andria DelTredici, Russell Kuo-fu Chan, Guangdan Zhu, K. David Becker, Tanya Moreno U.S. Patent Application: 2017/0051349 A1, Publication Date: 23 February 2017; https://www.google.com/patents/US20170051349 Method and system to predict response to treatments for mental disorders. Inventors: Guangdan Zhu, Cindy Wang, Tanya Moreno, Andrew Hellman, Alok Tomar, Svetlana Ivanova Gramatikova, Aditi Chawla, Russell Kuo-fu Chan, Adriana Del Tredici, Adrian Vilalta, K. David Becker, Michael Nova,
U.S. Patent Application: 2017/0051350 A1, Publication Date: 23 February 2017; https://www.google.com/patents/US20170051350 Sterile protection against human malaria by chemoattenuated PfSPZ vaccine. Benjamin Mordmüller, Güzin Surat, Heimo Lagler, Sumana Chakravarty, Andrew S. Ishizuka, Albert Lalremruata, Markus Gmeiner, Joseph J. Campo, Meral Esen, Adam J. Ruben, Jana Held, Carlos Lamsfus Calle, Juliana B. Mengue, Tamirat Gebru, Javier Ibáñez, Mihály Sulyok, Eric R. James, Peter F. Billingsley, KC Natasha, Anita Manoj, Tooba Murshedkar, Anusha Gunasekera, Abraham G. Eappen, Tao Li, Richard E. Stafford, Minglin Li, Phil L. Felgner, Robert A. Seder, Thomas L. Richie, B. Kim Lee Sim, Stephen L. Hoffman, Peter G. Kremsner Nature, 23 February 2017; 542(7642): 445-449. (OmniGrid 100) Plasmodium falciparum antigens. Inventors: Denise Doolan, Angela Trieu, and Phillip L. Felgner. U.S. Patent Application: 2017/0051026 A1, Publication Date: 23 February 2017. (OmniGrid 100) https://www.google.com/patents/US20170051026 A High-throughput Cell Microarray Platform for Correlative Analysis of Cell Differentiation and Traction Forces. Kerim B. Kaylan, Andreas P. Kourouklis, and Gregory H. Underhill. JoVE (Journal of Visualized Experiments), 1 March 2017; 121: e55362, 12 min. (OmniGrid Micro) https://www.jove.com/video/55362/a-high-throughput-cell-microarray-platform-for-correlative-analysis Antidotes for factor XA inhibitors and methods of using the same. Inventors: Uma Sinha, Genmin Lu, and Pamela B. Conley. United States Patent: US 9587233 B2, Publication Date: 7 March 2017. https://patents.google.com/patent/US9587233B2/en Grading of breast cancer. Inventors: Xiao-Jun Ma, Dennis C. Sgroi, and Mark G. Erlander. U.S. Patent Application: 2017/0073767 A1, Publication Date: 16 March 2017. https://www.google.com/patents/US20170073767 Compositions and Methods For Immunodominant Antigens. Inventors: Philip Felgner, David Huw Davies, and Xiaowu Liang. U.S. Patent Application: 2017/0081659 A1, Publication Date: 23 March 2017; (OmniGrid 100) https://www.google.com/patents/US20170081659 Detection of traumatic brain injury. Inventors: Sarjubhai Patel, and Thomas Rau. United States Patent: US 9605315 B2, Publication Date: 28 March 2017; (OmniGrid 100) https://www.google.com/patents/US9605315 T cell subtypes and reciprocal inflammatory mediator expression differentiate P. falciparum memory recall responses in asymptomatic and symptomatic malaria patients in southeastern Haiti. Jason S. Lehmann, Joseph J. Campo, Micheline Cicéron, Christian P. Raccurt, Jacques Boncy, Valery E. M. Beau De Rochars, and Anthony P. Cannella. PLoS One, 3 April 2017; 12(4): e0174718, 29 pp. (OmniGrid Accent) http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0174718
Devices and Methods for Prognosis Prediction for Melanoma Cancer. Inventors: Michael Alan Black, Jonathan Cebon, Parry John Guilford, and Thomas John. U.S. Patent Application: 2017/0107583 A1, Publication Date: 20 April 2017; https://www.google.com/patents/US20170107583 Multiplexed single cell protein expression analysis in solid tumours using a miniaturised microfluidic assay. Alastair J. Magness, James A. Squires, Beatrice Griffiths, Khurum Khan, Amanda Swain, Keith R. Willison, David Cunningham, Marco Gerlinger, and David R. Klug. Convergent Science Physical Oncology, 28 April 2017; 3(2): 024003; 11 pp. (OmniGrid Micro) http://iopscience.iop.org/article/10.1088/2057-1739/aa6aae/meta Detection of viral infection. Inventors: Cameron Stewart, and Andrew Bean. United States Patent: US 9657360 B2, Publication Date: 23 May 2017; (OmniGrid 100) https://www.google.com/patents/US9657360 Combinatorial Discovery of Defined Substrates That Promote a Stem Cell State in Malignant Melanoma. Douglas Zhang, Junmin Lee, Michael B. Sun, Yi Pei, James Chu, Martha U. Gillette, Timothy M. Fan, and Kristopher A. Kilian. ACS Central Science, 24 May 2017; 3(5): 381–393. (OGR-03). https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5445527/ Development of ELISAs for diagnosis of acute typhoid fever in Nigerian children. Jiin Felgner, Aarti Jain, Rie Nakajima, Li Liang, Algis Jasinskas, Eduardo Gotuzzo, Joseph M. Vinetz, Fabio Miyajima, Munir Pirmohamed, Fatimah Hassan-Hanga, Dominic Umoru, Binta Wudil Jibir, Safiya Gambo, Kudirat Olateju, Philip L. Felgner, Stephen Obaro, and D. Huw Davies PLoS Neglected Tropical Diseases, 22 June 2017; 11(6): e0005679, 24 pp. (OmniGrid 100) https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5498068/pdf/pntd.0005679.pdf Diagnosis And Treatment Of Cancers With MicroRNA Located In Or Near Cancer-Associated Chromosomal Features. Inventors: Carlo M. Croce, Chang-Gong Liu, George A. Calin, and Cinzia Sevignani. U.S. Patent Application: 2017/0175123 A1, Publication Date: 22 June 2017; (OmniGrid 100). https://www.google.com/patents/US20170175123 nBioChip, a Lab-on-a-Chip Platform of Mono-and Polymicrobial Biofilms for High-Throughput Downstream Applications. Anand Srinivasan, Nelson S. Torres, Kai P. Leung, Jose L. Lopez-Ribot, and Anand K. Ramasubramanian. mSphere, 28 June 2017; 2(3): e00247-17, 13pp. (OmniGrid Micro) https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5489659/pdf/mSphere.00247-17.pdf Identification of Novel Seroreactive Antigens in Johne's Disease Cattle Using the Mycobacterium tuberculosis Protein Array. John P. Bannantine, Joseph J. Campo, Lingling Li, Arlo Randall, Jozelyn Pablo, Craig A. Praul, Juan Antonio Raygoza Garay, Judith R. Stabel, and Vivek Kapur. Clinical and Vaccine Immunology; 5 July 2017; 24(7): e00081-17, 16 pp. (OmniGrid Accent)
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Methods for predicting an individual's clinical treatment outcome from sampling a group of patient's biological profiles. Inventor: Nien-Chih Wei U.S. Patent Application: 2016/0306917 A1, Publication Date: 20 October 2016; https://www.google.com/patents/US20160306917 Targeting Dysregulated Epigenetic Enzymes for Prostate Cancer Treatment. David Jarrand Annual Report, US AMR & MC, Univ. Wisconsin, October 2016, W81XWH-15-1-0628, 42 pp. Methods and compositions related to miR-21 and miR-29a, exosome inhibition, and cancer metastasis. Inventors: Carlo M. Croce, and Muller Fabbri. United States Patent: US 9481885 B2, Publication Date: 1 November 2016; (OmniGrid 100) https://www.google.com/patents/US9481885 Serum antibody assay for determining protection from malaria, and pre-erythrocytic subunit vaccines. Inventors: Philip Felgner, Stephen L. Hoffman, Robert Seder, and Joseph J. Campo Jr. U.S. Patent Application: 2016/0320404 A1, Publication Date: 3 November 2016; (OmniGrid Accent) https://www.google.com/patents/US20160320404 Experimental Evolution Reveals Interplay between Sch9 and Polyploid Stability in Yeast. Yi-Jin Lu, Krishna BS Swamy, and Jun-Yi Leu. PLoS Genetics, 3 November 2016; 12(11): e1006409, 26 pp. (OmniGrid 100) https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5094715/pdf/pgen.1006409.pdf Plasmodium falciparum antigens. Inventors: Denise Doolan, Angela Trieu, and Phillip L. Felgner. United States Patent: US 9505812 B2, Publication Date: 29 November 2016; (OmniGrid 100) https://www.google.com/patents/US9505812 Diagnosis and treatment of cancers with microrna located in or near cancer-associated chromosomal features. Inventors: Carlo M. Croce, Chang-Gong Liu, George A. Calin, and Cinzia Sevignani. United States Patent: US9506065 B2, Publication Date: 29 November 2016; (OmniGrid 100) https://www.google.com/patents/US9506065 Mapping lung tumor cell drug responses as a function of matrix context and genotype using cell microarrays. Kerim B. Kaylan, Stefan D. Gentile, Lauren E. Milling, Kaustubh N. Bhinge, Farhad Kosari, and Gregory H. Underhill Integrative Biology, 5 December 2016; 8(12): 1221-1231. (OmniGrid Micro) Transcriptomic change as evidence for cadmium-induced endocrine disruption in marine fish model of medaka, Oryzias javanicus. Youn-Jung Kim, Nayoung Lee, Seonock Woo, Jae-Chun Ryu, and Seungshic Yum. Molecular & Cellular Toxicology, December 2016; 12(4): 409-420.
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Xanthan/chitosan gold chip for metal enhanced protein biomarker detection. Patrick Domnanich, Dacimoneida Brito Peña, and Claudia Preininger. Biosensors and Bioelectronics, 15 January 2011; 26(5): 2559-2565. Segmental duplication as one of the driving forces underlying the diversity of the human immunoglobulin heavy chain variable gene region. Sreemanta Pramanik, Xiangfeng Cui, Hui-Yun Wang, Nyam-Osor Chimge, Guohong Hu, Li Shen, Richeng Gao, and Honghua Li. BMC Genomics, 27 January 2011; 12(1): 78, 12 pp. (OmniGrid Accent) http://www.biomedcentral.com/1471-2164/12/78 Identification of immunodominant antigens by probing a whole Chlamydia ORFome microarray using sera from immunized mice. Maria I. Cruz-Fisher, Chunmei Cheng, Guifeng Sun, Sukumar Pal, Andy Teng, Douglas M. Molina, Matthew A. Kayala, Adam Vigil, Pierre Baldi, Philip L. Felgner, Xiaowu Liang, Luis M. de la Maza Infection and Immunity, January 2011; 79(1): 246-257. (OmniGrid100) http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3019893/ Developmental decoupling of alternative phenotypes: insights from the transcriptomes of horn-polyphenic beetles. Snell-Rood, Emilie C., Amy Cash, Mira V. Han, Teiya Kijimoto, Justen Andrews, Armin P. Moczek. Evolution, January 2011; 65(1): 231-245. (OmniGrid300) http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3010270/ Surface modification for small-molecule microarrays and its application to the discovery of a tyrosinase inhibitor. Hyang Yeon Lee, and Seung Bum Park. Molecular BioSystems, 1 February 2011; 7(2): 304-310. Use of a novel micro-fluidic device to create arrays for multiplex analysis of large and small molecular weight compounds by surface plasmon resonance. Katrina Campbell, Terry McGrath, Stefan Sjölander, Thord Hanson, Mattias Tidare, Östen Jansson, Anna Moberg, Mark Mooney, Christopher Elliott, and Jos Buijs. Biosensors and Bioelectronics, 15 February 2011; 26(6): 3029-3036. DNA microarray based detection of genes involved in safety and technologically relevant properties of food associated coagulase-negative staphylococci. Marion Seitter, Christiane Nerz, Ralf Rosenstein, Friedrich Götz, and Christian Hertel. International Journal of Food Microbiology, 28 February 2011; 145(2): 449-458. (OmniGrid100) 贾慧, 王艳辉, 王进忠, 王升启, and 董金皋. 基因芯片技术检测黄瓜花叶病毒 , 烟草花叶病毒和马铃薯 Y 病毒 . 华北农学报, Acta Agriculturae Boreali-Sinica, 28 February 2011; 26(1): 83-86. (Technique for Cucumber Mosaic Virus, Tobacco Mosaic Virus and Potato Virus Y by gene chip Hui Jia, Yan-hui Wang, Jin-zhong Wang, Sheng-qi Wang, Jin-gao Dong) Microarray analysis of gene expression in disk abalone Haliotis discus discus after bacterial challenge.
Mahanama De Zoysa, Chamilani Nikapitiya, Chulhong Oh, Youngdeuk Lee, Ilson Whang, Jae-Seong Lee, Cheol Young Choi, and Jehee Lee. Fish & Shellfish Immunology, February 2011; 30(2): 661-673. http://www.researchgate.net/profile/Jae-Seong_Lee/publication/49737878_Microarray_analysis_of_gene_expression_in_disk_abalone_Haliotis_discus_discus_after_bacterial_challenge/links/0f317534f65e6e39bb000000.pdf C terminus of Clostridium perfringens enterotoxin downregulates CLDN4 and sensitizes ovarian cancer cells to Taxol and Carboplatin. Zhijian Gao, Xiaoyin Xu, Bruce McClane, Qing Zeng, Babak Litkouhi, William R. Welch, Ross S. Berkowitz, Samuel C. Mok, and Elizabeth I.O. Garner. Clinical Cancer Research, 1 March 2011; 17(5): 1065-1074. (OmniGrid100) http://clincancerres.aacrjournals.org/content/17/5/1065.full.pdf+html Rat mitochondrion-neuron focused microarray (rMNChip) and bioinformatics tools for rapid identification of differential pathways in brain tissues. Yan A. Su, Qiuyang Zhang, David M. Su, and Michael X. Tang. International Journal of Biological Sciences, 29 March 2011; 7(3): 308-322. (OmniGrid100) http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3076503/ Tumour-specific methylation of PTPRG intron 1 locus in sporadic and Lynch syndrome colorectal cancer. Eddy HJ van Roon, Noël FCC de Miranda, Merlijn P. van Nieuwenhuizen, Emile J. de Meijer, Marjo van Puijenbroek, Pearlly S. Yan, Tim HM Huang, Tom van Wezel, Hans Morreau, Judith M. Boer. European Journal of Human Genetics, March 2011; 19(3): 307-312. http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3061992/ Development of a single base extension-tag microarray for the detection of pathogenic Vibrio species in seafood. Wanyi Chen, Shuijing Yu, Chunxiu Zhang, Jilun Zhang, Chunlei Shi, Yu Hu, Biao Suo, Huan Cao, and Xianming Shi. Applied Microbiology and Biotechnology, March 2011; 89(6): 1979-1990. (OmniGrid Accent) http://www.ebioservice.com/paper/2011/2011018.pdf Effect of sublethal heat stress on Salmonella typhimurium virulence. S. A. Sirsat, K. M. Burkholder, A. Muthaiyan, S. E. Dowd, A. K. Bhunia, and S. C. Ricke. Journal of Applied Microbiology, March 2011; 110(3): 813-822. (OmniGrid Accent) http://onlinelibrary.wiley.com/doi/10.1111/j.1365-2672.2011.04941.x/full Integration of molecular biology tools for identifying promoters and genes abundantly expressed in flowers of Oncidium Gower Ramsey. Chen-Tran Hsu, De-Chih Liao, Fu-Hui Wu, Nien-Tze Liu, Shu-Chen Shen, Shu-Jen Chou, Shu-Yun Tung, Chang-Hsien Yang, Ming-Tsair Chan, and Choun-Sea Lin. BMC Plant Biology, 7 April 2011; 11(1): 60, 14 pp. (OmniGrid 100) http://www.biomedcentral.com/content/pdf/1471-2229-11-60.pdf A first step towards practical single cell proteomics: a microfluidic antibody capture chip with TIRF detection. Ali Salehi-Reyhani, Joseph Kaplinsky, Edward Burgin, Miroslava Novakova, Richard H. Templer, Peter Parker, Mark AA Neil, Oscar Ces, Paul French, Keith R. Willison and David Klug
Lab on a Chip, 7 April 2011; 11(7): 1256-1261. (OmniGrid Micro) http://www.researchgate.net/profile/Richard_Templer/publication/49968139_A_first_step_towards_practical_single_cell_proteomics_a_microfluidic_antibody_capture_chip_with_TIRF_detection/links/02e7e52b40a7bda486000000.pdf Development of a high-throughput Candida albicans biofilm chip. Anand Srinivasan, Priya Uppuluri, Jose Lopez-Ribot, and Anand K. Ramasubramanian. PLoS One, 22 April 2011; 6(4): e19036, 9 pp. (OmniGrid Micro) http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0019036 Development of single-stranded DNA aptamers for specific Bisphenol A detection. Minjoung Jo, Ji-Young Ahn, Joohyung Lee, Seram Lee, Sun Woo Hong, Jae-Wook Yoo, Jeehye Kang, Pooja Dua, Dong-ki Lee, Seunghun Hong, and Soyoun Kim Oligonucleotides, April 2011; 21(2): 85-91. (OmniGrid Accent) http://online.liebertpub.com/doi/full/10.1089/oli.2010.0267 Analysis of differentially expressed genes in the precocious line of Eimeria maxima and its parent strain using suppression subtractive hybridization and cDNA microarrays. Hui Dong, Jiaojiao Lin, Hongyu Han, Lianlian Jiang, Qiping Zhao, Shunhai Zhu, and Bing Huang. Parasitology Research, April 2011; 108(4): 1033-1040. Gene expression changes in patient-matched gastric normal mucosa, adenomas, and carcinomas. Hyunki Kim, Jung Woo Eun, Hanna Lee, Suk Woo Nam, Hwanseok Rhee, Kwi Hye Koh, and Hoguen Kim. Experimental and Molecular Pathology, April 2011 90(2): 201-209. http://www.researchgate.net/profile/Hwanseok_Rhee/publication/49709407_Gene_expression_changes_in_patient-matched_gastric_normal_mucosa_adenomas_and_carcinomas/links/551fea1d0cf29dcabb08f543.pdf Methods for Screening Chemical, Biological, and Physical Agents for Disinfecting Infectious Norovirus. Inventors: Myung L. Kim, and David J. Schlesinger. U.S. Patent Application: 2011/0104300 A1, Publication Date: 5 May 2011; (OmniGrid 100) https://www.google.com/patents/US20110104300 Visual genome-wide RNAi screening to identify human host factors required for Trypanosoma cruzi infection. Auguste Genovesio, Miriam A. Giardini, Yong-Jun Kwon, Fernando de Macedo Dossin, Seo Yeon Choi, Nam Youl Kim, Hi Chul Kim, Sung Yong Jung, Sergio Schenkman, Igor C. Almeida, Neil Emans, Lucio H. Freitas-Junior PLoS One, 20 May 2011; 6(5): e19733. http://www.plosone.org/article/info%3Adoi%2F10.1371%2Fjournal.pone.0019733 Analysis of methanotroph community composition using a pmoA-based microbial diagnostic microarray. Nancy Stralis-Pavese, Guy CJ Abell, Angela Sessitsch, and Levente Bodrossy. Nature Protocols, May 2011; 6(5): 609-624. (OmniGrid 100) http://www.nature.com/nprot/journal/v6/n5/full/nprot.2010.191.html Antibodies on demand: a fast method for the production of human scFvs with minimal amounts of antigen.
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Development and experimental validation of a 20K Atlantic cod (Gadus morhua) oligonucleotide microarray based on a collection of over 150,000 ESTs. Marije Booman, Tudor Borza, Charles Y. Feng, Tiago S. Hori, Brent Higgins, Adrian Culf, Daniel Léger, Ian C. Chute, Anissa Belkaid, Marlies Rise, A. Kurt Gamperl, Sophie Hubert, Jennifer Kimball, Rodney J. Ouellette, Stewart C. Johnson, Sharen Bowman, and Matthew L. Rise Marine Biotechnology, August 2011; 13(4): 733-750. (OmniGrid 100) http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3139889/ A novel genetic marker of the ovomucoid gene associated with hatchability in Tsaiya ducks (Anas platyrhynchos). H-L. Huang, Y-S. Cheng, C-W. Huang, M-C. Huang, and W-H. Hsu. Animal Genetics, August 2011; 42(4): 421-427. (OmniGrid Accent) Effect of fluidic transport on the reaction kinetics in lectin microarrays. Bibhas Roy, Tamal Das, Tapas K. Maiti, and Suman Chakraborty. Analytica Chimica Acta, 2 September 2011; 701(1): 6-14. http://www.researchgate.net/profile/Bibhas_Roy/publication/235933182_Effect_of_fluidic_transport_on_the_reaction_kinetics_in_lectin_microarrays/links/00b495391d57065b0e000000.pdf Mitochondria-Specific Mouse Gene Array and its Application in Toxicogenomics. Varsha G. Desai In: General, Applied and Systems Toxicology, 15 September 2011; John Wiley & Sons, Wiley Online Library (OmniGrid100) DOI: 10.1002/9780470744307.gat209 Positive emotional learning is regulated in the medial prefrontal cortex by GluN2B-containing NMDA receptors. Jeffrey Burgdorf, Roger A. Kroes, Craig Weiss, M. Matthew Oh, John F. Disterhoft, Stefan M. Brudzynski, Jaak Panksepp, and Joseph R. Moskal. Neuroscience, 29 September 2011; 192: 515-523. http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3166413/ Sterile protective immunity to malaria is associated with a panel of novel P. falciparum antigens. Angela Trieu, Matthew A. Kayala, Chad Burk, Douglas M. Molina, Daniel A. Freilich, Thomas L. Richie, Pierre Baldi, Philip L. Felgner, and Denise L. Doolan. Molecular & Cellular Proteomics, September 2011; 10(9): M111.007948, 15 pp. (OmniGrid 100) http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3186199/?report=printable Identification and exploration of pollen tube small proteins encoded by pollination-induced transcripts. Jong-Chin Huang, Liang-Chi Chang, Min-Long Wang, Cian-Ling Guo, Mei-Chu Chung, and Guang-Yuh Jauh. Plant and Cell Physiology, September 2011; 52(9): 1546-1559. http://pcp.oxfordjournals.org/content/52/9/1546.long Gene expression profiles in response to salt stress in Hibiscus tiliaceus. Guili Yang, Renchao Zhou, Tian Tang, Xiaoshu Chen, Jianhua Ouyang, Lian He, Weijin Li, Sufang Chen, Miaomiao Guo, Xinnian Li, Cairong Zhong, Suhua Shi Plant Molecular Biology Reporter, September 2011; 29(3): 609-617. http://www.researchgate.net/profile/Renchao_Zhou/publication/225724260_Gene_Expression_Profiles_in_Response_to_Salt_Stress_in_Hibiscus_Tiliaceus/links/00b7d518f8d4f7e9a5000000.pdf
Genome-wide expression profiling and mutagenesis studies reveal that lipopolysaccharide responsiveness appears to be absolutely dependent on TLR4 and MD-2 expression and is dependent upon intermolecular ionic interactions. Jianmin Meng, Mei Gong, Harry Björkbacka, and Douglas T. Golenbock. The Journal of Immunology, 1 October 2011; 187(7): 3683-3693. http://www.jimmunol.org/content/187/7/3683.long Profiling the humoral immune response of acute and chronic Q fever by protein microarray. Adam Vigil, Chen Chen, Aarti Jain, Rie Nakajima-Sasaki, Algimantas Jasinskas, Jozelyn Pablo, Laura R. Hendrix, James E. Samuel, and Philip L. Felgner. Molecular & Cellular Proteomics, October 2011; 10(10): M110.006304, 12 pp. (OmniGrid100) http://www.mcponline.org/content/10/10/M110.006304.full Detection of human papilloma viruses using nanostructurated silicon support in microarray technology. Monica Simion, Lorand Savu, Antonio Radoi, Mihaela Miu, and Adina Bragaru. Journal of nanoscience and nanotechnology, October 2011; 11(10): 9102-9109. (OmniGrid Micro) Allergen diagnosis microarray with high-density immobilization capacity using diamond-like carbon-coated chips for profiling allergen-specific IgE and other immunoglobulins. Koichi Suzuki, Mineyoshi Hiyoshi, Hitomi Tada, Miwa Bando, Takao Ichioka, Norio Kamemura, and Hiroshi Kido. Analytica Chimica Acta, 14 November 2011; 706(2): 321-327. (OmniGrid Accent) Interplay between histopathological alterations, cigarette smoke and chemopreventive agents in defining microRNA profiles in mouse lung. Alberto Izzotti, Patrizia Larghero, Roumen Balansky, Ulrich Pfeffer, Vernon E. Steele, and Silvio De Flora. Mutation Research. Fundamental and Molecular Mechanisms of Mutagenesis, 1 December 2011; 717(1-2): 17-24. Protein chip for the parallel quantification of high and low abundant biomarkers for sepsis. Ursula Sauer, Patrick Domnanich, and Claudia Preininger. Analytical Biochemistry, 1 December 2011; 419(1): 46-52. Rapid selection of single cells with high antibody production rates by microwell array. Sunyoung Park, Jieun Han, Wanjung Kim, Gyun Min Lee, and Hak-Sung Kim. Journal of Biotechnology, 10 December 2011; 156(3): 197-202. http://bel.kaist.ac.kr/extfiles/papers/1317621506-1.pdf Humoral immune responses to Plasmodium falciparum among HIV-1-infected Kenyan adults. Obinna N. Nnedu, Michael P. O'Leary, Daniel Mutua, Beth Mutai, Mina Kalantari-Dehaghi, Al Jasinskas, Rie Nakajima-Sasaki, Grace John-Stewart, Phelgona Otieno, Xiaowu Liang, John Waitumbi, Francis Kimani, David Camerini, Philip L. Felgner, Judd L. Walson, and Adam Vigil Proteomics - Clinical Applications, 28 December 2011; 5(11-12): 613-623. (OmniGrid100) http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3406934/ Fluorescent labeling agents change binding profiles of glycan-binding proteins. Yiyan Fei, Yung-Shin Sun, Yanhong Li, Kam Lau, Hai Yu, Harshal A. Chokhawala, Shengshu Huang, James P. Landry, Xi Chen, and Xiangdong Zhu.
Molecular BioSystems, December 2011; 7(12): 3343-3352. (OmniGrid100) http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3271732/ Lateralization of the developing rat hippocampal formation. Amanda Gross PhD Theses, December 2011; University of New Mexico, 272 pp. http://repository.unm.edu/bitstream/handle/1928/17475/Amanda%20Gross%27%20Final%20Dissertation.pdf?sequence=1 Metal Ion Sensor with Catalytic DNA in a Nanofluidic Intelligent Processor. Donald M. Cropek, Tulika S. Dalavoy, Paul W. Bohn, Yi Lu, Jonathan V. Sweedler, and Mark A. Shannon. Final Report, December 2011; ERDC/CERL-TR-11-47, Engineer Research and Development Center, Champaign IL, 130 pp. (OmniGrid100) http://www.dtic.mil/dtic/tr/fulltext/u2/a575220.pdf 2010. Analyse komplexer Alterationen des MDM4-TP53-MDM2-Regulationsnetzwerks im humanen hepatozellulären Karzinom basierend auf hochauflösenden array-basierten Comparativen Genomischen Hybridisierungen. Claudia Schiller PhD Theses, 25 January 2010; Ruprecht-Karls-Universitat, Heidelberg, Germany, pp.1-133 http://archiv.ub.uni-heidelberg.de/volltextserver/10449/1/INAUGURAL_DISSERTATION_Claudia_Schiller_2010_ohne_Sperre.pdf Microarray analysis of Paramecium bursaria chlorella virus 1 transcription. Giane M. Yanai-Balser, Garry A. Duncan, James D. Eudy, Dong Wang, Xiao Li, Irina V. Agarkova, David D. Dunigan, and James L. Van Etten. Journal of Virology, January 2010; 84(1): 532-542. (OmniGrid100) http://jvi.asm.org/content/84/1/532.full Oligonucleotide-based microarray for detection of plant viruses employing sequence-independent amplification of targets. Veenita Grover, Margaret L. Pierce, Peter Hoyt, Fengqiu Zhang, and Ulrich Melcher. Journal of Virological Methods, January 2010; 163(1): 57-67. http://www.researchgate.net/profile/Ulrich_Melcher/publication/38029663_Oligonucleotide-based_microarray_for_detection_of_plant_viruses_employing_sequence-independent_amplification_of_targets/links/0917a1f6b6297abafc85e444.pdf Phage-type specific markers identified by Diversity Arrays Technology (DArT) analysis of Salmonella enterica ssp. enterica serovars Enteritidis and Typhimurium. Evelyn Hackl, Marianne Konrad-Köszler, Andrzej Kilian, Peter Wenzl, Christian Kornschober, and Angela Sessitsch. Journal of Microbiological Methods, January 2010; 80(1): 100-105. http://www.bashanfoundation.org/angela/angelaphage.pdf
Analysis of loss of heterozygosity on chromosome 4q in hepatocellular carcinoma using high-throughput SNP array. Huakun Zhang, Haiqing Ma, Qijing Wang, Minshan Chen, Desheng Weng, Hui Wang, Jun Zhou Yongqiang Li, Jiancong Sun, Yibing Chen, Xiaoting Liang, Jingjing Zhao, Ke Pan, Huiyun Wang, Jianchuan Xia Oncology Reports, 1 February 2010; 23(2): 445-455. (OmniGrid Accent) Addressable bipartite molecular hook (ABMH): Immobilized hairpin probes with sensitivity below 50fM. Julien BP Landré, Markus F. Blaess, Matthias Kohl, Tina Schlicksbier, Andriy Ruryk, Ralf Kinscherf, Ralf A. Claus et al. Albin Hermetter, Matthias Keller, Michael Bauer,Hans-Peter Deigner Analytical Biochemistry, 1 February 2010; 397(1): 60-66. http://www.researchgate.net/profile/Ralf_Claus/publication/26890970_Addressable_bipartite_molecular_hook_(ABMH)_immobilized_hairpin_probes_with_sensitivity_below_50_fM/links/0deec5281147810dbe000000.pdf Mixture comprising placental plasmodium polypeptide for use in treatment and prevention of parasitic infection of liver. Inventors: Michal Fried, Patrick E. Duffy, Susan Francis, Jason P. Wendler, Theonest K. Mutabingwa, and Andrew Oleinikov. United States Patent: US 7655247 B2, Publication Date: 2 February 2010; (OGR-04) https://www.google.com/patents/US7655247 Protein microarray: sensitive and effective immunodetection for drug residues. Li Zhong, Wei Zhang, Cindy Zer, Kun Ge, Xu Gao, and Kemp H. Kernstine. BMC Biotechnology, 16 February 2010; 10(1): 12, 7 pp. (OmniGrid100) http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2827365/ Identification of differentially expressed genes in early stages of Eimeria tenella by suppression subtractive hybridization and cDNA microarray. Hong Y. Han, Jiao J. Lin, Qi P Zhao, Hui Dong, Lian L. Jiang, Mei Q Xu, Shun H. Zhu, Bing Huang. Journal of Parasitology, February 2010; 96(1): 95-102. (OmniGrid Accent) Hepatic Stellate Cell and Myofibroblast-Like Cell Gene Expression in the Explanted Cirrhotic Livers of Patients Undergoing Liver Transplantation. J. Michael Estep, Linda O’Reilly, Geraldine Grant, James Piper, Johann Jonsson, Arian Afendy, Vikas Chandhoke and Zobair M. Younossi Digestive Diseases and Sciences, February 2010; 55(2): 496-504 (OmniGrid Accent) Analysis of loss of heterozygosity on chromosome 4q in hepatocellular carcinoma using high-throughput SNP array. Huakun Zhang, Haiqing Ma, Qijing Wang, Minshan Chen, Desheng Weng, Hui Wang, Jun Zhou, Yongqiang Li, Jiancong Sun, Yibing Chen, Xiaoting Liang, Jingjing Zhao, Ke Pan, Huiyun Wang and Jianchuan Xia Oncology Reports, February 2010; 23(2): 445-455. (OmniGrid Accent) (we have .pdf file) Isolation and characterization of osmotic stress-induced genes in poplar cells by suppression subtractive hybridization and cDNA microarray analysis. Eun-Kyung Bae, Hyoshin Lee, Jae-Soon Lee, and Eun-Woon Noh.
Plant Physiology and Biochemistry, February-March 2010; 48(2/3): 136-141. Use of High-Throughput Proteomic Arrays for the Discovery of Disease-Associated Molecules. Douglas M. Molina, W. John W. Morrow, and Xiaowu Liang. In: Pharmaceutical Sciences Encyclopedia, 15 March 2010; John Wiley & Sons, DOI: 10.1002/9780470571224.pse259. Serological profiling of a Candida albicans protein microarray reveals permanent host-pathogen interplay and stage-specific responses during candidemia. A. Brian Mochon, Ye Jin, Matthew A. Kayala, John R. Wingard, Cornelius J. Clancy, M. Hong Nguyen, Philip Felgner, Pierre Baldi, and Haoping Liu. PLoS Pathogens, 26 March 2010; 6(3): e1000827, 14 pp. (OmniGrid100) http://journals.plos.org/plospathogens/article?id=10.1371/journal.ppat.1000827 Comparison of global transcriptional responses to primary and secondary Eimeria acervulina infections in chickens. Chul-Hong Kim, Hyun S. Lillehoj, Yeong-Ho Hong, Calvin L. Keeler, and Erik P. Lillehoj. Developmental & Comparative Immunology, March 2010; 34(3): 344-351. (OmniGrid Accent) Expression of phosphofructokinase in Neisseria meningitidis. Gino JE Baart, Marc Langenhof, Bas van de Waterbeemd, Hendrik-Jan Hamstra, Bert Zomer, Leo A. van der Pol, E. Coen Beuvery, Johannes Tramper, and Dirk E. Martens. Microbiology, March 2010; 156(2): 530-542. (OmniGrid100) http://mic.sgmjournals.org/content/journal/micro/10.1099/mic.0.031641-0?crawler=true&mimetype=application/pdf Bioconjugation of barium titanate nanocrystals with immunoglobulin G antibody for second harmonic radiation imaging probes. Chia-Lung Hsieh, Rachel Grange, Ye Pu, and Demetri Psaltis. Biomaterials, March 2010; 31(8): 2272-2277. (OmniGrid300) http://infoscience.epfl.ch/record/154687/files/BM_31_2272_Mar2010.pdf Development of a DNA microarray to detect antimicrobial resistance genes identified in the National Center for Biotechnology Information database. Jonathan G. Frye, Rebecca L. Lindsey, Gaelle Rondeau, Steffen Porwollik, Fred Long, Michael McClelland, Charlene R. Jackson, Mark D. Englen, Richard J. Meinersmann, Mark E. Berrang, Johnnie A. Davis, John B. Barrett, Jennifer B. Turpin, Sutawee N. Thitaram, Paula J. Fedorka-Cray Microbial Drug Resistance, March 2010; 16(1): 9-19. http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3116450/ Changes in reproductive roles are associated with changes in gene expression in fire ant queens. Yannick Wurm, John Wang, and Laurent Keller. Molecular Ecology, March 2010; 19(6): 1200-1211. (OmniGrid300) http://s3.amazonaws.com/academia.edu.documents/30620274/wurm2010fireantqueendealationexpression.pdf?AWSAccessKeyId=AKIAJ56TQJRTWSMTNPEA&Expires=1440103127&Signature=ctqQg%2Bi1My5Ib2lbMFOB37nL0QI%3D&response-content-disposition=inline Transcriptome analysis of Escherichia coli O157: H7 exposed to lysates of lettuce leaves. Jennifer L. Kyle, Craig T. Parker, Danielle Goudeau, and Maria T. Brandl. Applied and Environmental Microbiology, March 2010; 76(5): 1375-1387. (OmniGrid Accent)
http://aem.asm.org/content/76/5/1375.full Identification of immunodominant antigens of Chlamydia trachomatis using proteome microarrays. Douglas M. Molina, Sukumar Pal, Mathew A. Kayala, Andy Teng, Paul J. Kim, Pierre Baldi, Philip L. Felgner, Xiaowu Liang, and M. Luis. Vaccine, 9 April 2010; 28(17): 3014-3024. (OmniGrid Accent) http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3048468/ Development of a Novel DNA Microchip for Pathogen Detection Khin Lay Maw MS Theses, 13 April 2010; Georgia State University, 40 pp. (OmniGridMicro) http://scholarworks.gsu.edu/chemistry_theses/34 HST. 509/Biophysics 205 Project Proposal. Daniel Goodman Project Proposal, 23 April 2010; 8 pp. (OmniGrid100) http://llama.mshri.on.ca/courses/Biophysics205/Proposals_2010/Daniel_2010.pdf Surveying genome-wide levels of sequence divergence between species using comparative genomic hybridization: A proof-of-concept from Drosophila. Suzy C.P. Renn, Heather E. Machado, Albyn Jones, Kosha Soneji, Rob Kulathinal, Hans A Hofmann BMC Genomics, 29 April 2010, 11: 271, 12 pp. (OmniGrid100) http://www.biomedcentral.com/1471-2164/11/271 Development of an oligonucleotide-based microarray to detect multiple foodborne pathogens. Biao Suo, Yiping He, George Paoli, Andrew Gehring, Shu-I. Tu, and Xianming Shi. Molecular and Cellular Probes, April 2010; 24(2): 77-86. (OmniGrid Accent) http://www.researchgate.net/profile/Biao_Suo/publication/38014483_Development_of_an_oligonucleotide-based_microarray_to_detect_multiple_foodborne_pathogens/links/0fcfd5057bacf4ca4e000000.pdf Large scale immune profiling of infected humans and goats reveals differential recognition of Brucella melitensis antigens. Li Liang, Diana Leng, Chad Burk, Rie Nakajima-Sasaki, Matthew A. Kayala, Vidya L. Atluri, Jozelyn Pablo, Berkay Unal, Thomas A. Ficht, Eduardo Gotuzzo, Mayuko Saito,W. John W Morrow, Xiaowu Liang, Pierre Baldi, Robert H.Gilman, Joseph M. Vinetz, Renée M. Tsolis, Philip L. Felgner PLoS Neglected Tropical Diseases, 4 May 2010; 4(5): e673, 11 pp. (OmniGrid100) http://journals.plos.org/plosntds/article?id=10.1371/journal.pntd.0000673 Simple surface chemistry to immobilize DNA probes that significantly increases sensitivity and spots density of surface plasmon resonance imaging based microarray systems. Flavien Pillet, Christophe Thibault, Sophie Bellon, Emmanuel Maillart, Emmanuelle Trévisiol, Christophe Vieu, Jean M. François, and Véronique Anton Leberre. Sensors and Actuators B: Chemical, 18 May 2010; 147(1): 87-92. (OmniGrid Micro) Detecting microRNA activity from gene expression data. Stephen F. Madden, Susan B. Carpenter, Ian B. Jeffery, Harry Björkbacka, Katherine A. Fitzgerald, Luke A. O'Neill, and Desmond G. Higgins. BMC Bioinformatics, 18 May 2010; 11(1): 257, 14 pp. (OmniGrid100) http://www.biomedcentral.com/1471-2105/11/257
Study of CRP immobilization on nanostructured silicon. Monica Simion, Lavinia L. Ruta, Mihaela Matache, Irina Kleps, Mihaela Miu, Codruta C. Paraschivescu, Adina Bragaru, and Teodora Ignat. Materials Science and Engineering: Ser. B, 25 May 2010; 169(1): 67-72. (OmniGrid Micro) http://www.researchgate.net/profile/Monica_Simion/publication/235218149_Study_of_CRP_immobilization_on_nanostructured_silicon/links/02bfe5107b14d04d80000000.pdf A Comparison of Control Spleen Gene Expression Using Microarray and High Through-Put Sequencing. Anne Mirabito. BS Theses, May 2010; University of Delaware, 45 pp. (OmniGrid Accent) http://dspace.udel.edu/bitstream/handle/19716/12611/Mirabito%2c%20Anne.pdf?sequence=1 Effect of pistachio oil on gene expression of IFN-induced protein with tetratricopeptide repeats 2: A biomarker of inflammatory response. Jun Zhang, Penny M. Kris-Etherton, Jerry T. Thompson, and John P. Vanden Heuvel. Molecular Nutrition & Food Research, May 2010; 54(Suppl.1): S83-S92. Applications of microarrays for crop improvement: here, there, and everywhere. David W. Galbraith, and Jeremy Edwards. BioScience, May 2010; 60(5): 337-348. (OmniGrid 300) http://bioscience.oxfordjournals.org/content/60/5/337.full Modulation of microRNA expression by budesonide, phenethyl isothiocyanate and cigarette smoke in mouse liver and lung. Alberto Izzotti, Patrizia Larghero, Cristina Cartiglia, Mariagrazia Longobardi, Ulrich Pfeffer, Vernon E. Steele, and Silvio De Flora. Carcinogenesis, May 2010; 31(5): 894-901. (OmniGrid Accent) http://carcin.oxfordjournals.org/content/31/5/894.full Application of a target array comparative genomic hybridization to prenatal diagnosis. Ji Hyeon Park, Jung Hoon Woo, Sung Han Shim, Song-Ju Yang, Young Min Choi, Kap-Seok Yang, and Dong Hyun Cha. BMC Medical Genetics, 24 June 2010; 11: 102, 8 pp. (OmniGrid100) http://www.biomedcentral.com/1471-2350/11/102/ Printed protein microarrays on unmodified plastic substrates. Meike Moschallski, Johannes Baader, Oswald Prucker, and Jürgen Rühe. Analytica Chimica Acta, 25 June 2010; 671(1): 92-98. (OmniGrid100) http://www.researchgate.net/profile/Oswald_Prucker/publication/44667029_Printed_protein_microarrays_on_unmodified_plastic_substrates/links/0046351dbf2f46f6e9000000.pdf Genome-wide profiling of humoral immune response to Coxiella burnetii infection by protein microarray. AdamVigil, Rocio Ortega, Rie Nakajima-Sasaki, Jozelyn Pablo, Douglas M. Molina, Chien-Chung Chao, Hua-Wei Chen, Wei-Mei Ching, and Philip L. Felgner. Proteomics, June 2010; 10(12): 2259-2269. (OmniGrid100) http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2892821/
Microarray image enhancement by denoising using decimated and undecimated multiwavelet transforms. Ali Zifan, Mohammad Hassan Moradi, and Shahriar Gharibzadeh. Signal, Image and Video Processing, June 2010; 4(2): 177-185. http://bme2.aut.ac.ir/mhmoradi/EN.Journal%20Articles/Microarray%20image%20enhancement%20by%20denoising%20using%20decimated.pdf AMY2A: A possible tumor-suppressor gene of 1p21. 1 loss in gastric carcinoma. Ji Un Kang, Sun Hoe Koo, Kye Chul Kwon, and Jong Woo Park. International Journal of Oncology, June 2010; 36(6): 1429-1435. (we have pdf file) Comparison of genotypes of Salmonella enterica serovar Enteritidis phage type 30 and 9c strains isolated during three outbreaks associated with raw almonds. Craig T. Parker, Steven Huynh, Beatriz Quiñones, Linda J. Harris, and Robert E. Mandrell. Applied and Environmental Microbiology, June 2010; 76(11): 3723-3731. (OmniGrid Accent) http://aem.asm.org/content/76/11/3723.full DNA methylation analysis for minimal-invasive Breast cancer diagnostic testing. Matthias Wielscher MS Theses, June 2010; Universität Wien, 93 pp. http://othes.univie.ac.at/10526/1/2010-06-19_0209594.pdf Array-based analysis of secreted glycoproteins for rapid selection of a single cell producing a glycoprotein with desired glycosylation. Sunyoung Park, Wanjung Kim, Yongtae Kim, Young Dok Son, Sang-Chul Lee, Eunkyung Kim, Sung Ho Kim, Jung Hoe Kim, and Hak-Sung Kim. Analytical Chemistry, 1 July 2010: 82(13): 5830-5837. Direct and Rapid Detection of RNAs on a Novel RNA Microchip. Sarah M. Spencer, Lina Lin, Cheng-Feng Chiang, Zhengchun Peng, Peter Hesketh, Jozef Salon, and Zhen Huang. ChemBioChem, 5 July 2010; 11(10): 1378-1382. (OmniGrid Micro) http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3637927/ Identification of the feline humoral immune response to Bartonella henselae infection by protein microarray. Adam Vigil, Rocio Ortega, Aarti Jain, Rie Nakajima-Sasaki, Xiaolin Tan, Bruno B. Chomel, Rickie W. Kasten, Jane E. Koehler, and Philip L. Felgner. PLoS One, 6 July 2010; 5(7): e11447, 11 pp. (OmniGrid100) http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0011447 Temperature and time-resolved total internal reflectance fluorescence analysis of reusable DNA hydrogel chips. Thorsten Neumann, Andrew J. Bonham, Gregory Dame, Bernd Berchtold, Thomas Brandstetter, and Jürgen Rühe. Analytical Chemistry, 15 July 2010; 82(14): 6124-6131. (OmniGrid100) Genomic change of chromosome 8 predicts the response to taxane-based neoadjuvant chemotherapy in node-positive breast cancer.
Sehwan Han, Kyeongmee Park, Eunah Shin, Hyun-Jung Kim, Jung Yeon Kim, Ji Young Kim, and Geumhee Gwak. Oncology Reports, July 2010; 24(1): 121-128. (OmniGrid100) (we have pdf file) Microbial diagnostic microarray for food-and water-borne pathogens. Tanja Kostić, Beatrix Stessl, Martin Wagner, Angela Sessitsch, and Levente Bodrossy. Microbial Biotechnology, July 2010; 3(4): 444-454. http://onlinelibrary.wiley.com/doi/10.1111/j.1751-7915.2010.00176.x/full Genetic diversity in Campylobacter jejuni is associated with differential colonization of broiler chickens and C57BL/6J IL10-deficient mice. David L. Wilson, Vijay AK Rathinam, Weihong Qi, Lukas M. Wick, Jeff Landgraf, Julia A. Bell, Anne Plovanich-Jones, Jodi Parrish, Russell L. Finley, Linda S. Mansfield, John E. Linz Microbiology, July 2010; 156(7): 2046-2057. (OmniGrid100) http://mic.sgmjournals.org/content/journal/micro/10.1099/mic.0.035717-0?crawler=true&mimetype=application/pdf Covered with epoxy resin and/or phenolic resin; solid phase synthesis. Inventor: Claudia Preininger United States Patent: US 7790472 B2, Publication Date: 7 September 2010; https://www.google.com/patents/US7790472 High-throughput profiling of the humoral immune responses against thirteen human papillomavirus types by proteome microarrays. Martha Luevano, Hans-Ulrich Bernard, Hugo A. Barrera-Saldaña, Victor Trevino, Alejandro Garcia-Carranca, Luisa L.Villa, Bradley J. Monk, Xiaolin Tan, D. Huw Davies, Phil L. Felgner, Mina Kalantari Virology, 15 September 2010; 405(1): 31-40. (OmniGrid100) http://www.sciencedirect.com/science/article/pii/S0042682210003326?np=y Salt concentration effects on equilibrium melting curves from DNA microarrays. J. Fuchs, J-B. Fiche, A. Buhot, R. Calemczuk, and T. Livache. Biophysical Journal, 22 September 2010; 99(6): 1886-1895. http://www.sciencedirect.com/science/article/pii/S0006349510008416 Method for constructing a genomic hybridization array for precision genetic diagnosis. Inventors: Lisa G. Shaffer, Bassem A. Bejjani U.S. Patent Application: 2010/0248992 A1, Publication Date: 30 September 2010 (OG Accent) http://www.lens.org/lens/patent/US_2010_0248992_A1/fulltext Evaluation of one-and two-color gene expression arrays for microbial comparative genome hybridization analyses in routine applications. Roland Schwarz, Biju Joseph, Gabriele Gerlach, Anja Schramm-Glück, Kathrin Engelhard, Matthias Frosch, Tobias Müller, and Christoph Schoen. Journal of clinical microbiology, September 2010; 48(9): 3105-3110. http://jcm.asm.org/content/48/9/3105.full Centrifugal Fluidic System for Enhanced Mixing and Reducing Incubation Times During Protein Microarray Processing. Z. Noroozi, H. Kido, R. Peytavi, R. Sasaki, A. Jasinskas, P. Felgner and M. J. Madou
In: 14th International Conference on Miniaturized Systems for Chemistry and Life Sciences, Groningen, The Netherlands, 3 - 7 October 2010; pp. 79-81 (OmniGrid 100) http://www.rsc.org/binaries/LOC/2010/PDFs/Papers/028_1143.pdf Epigenetische Veränderungen in Tumoren: Untersuchung der DNA-Methylierung in prognostischen Subgruppen der chronischen lymphatischen Leukämie und im Medulloblastom. Verena Julia Fleig Ph.D. Theses, 19 October 2010; Ruprecht - Karls – Universität, Heidelberg, 185 pp. http://archiv.ub.uni-heidelberg.de/volltextserver/11364/1/Dissertation_Verena_Fleig.pdf Electrochemical Investigation of Porous Silicon/Gold System in Biological Electrolyte. Monica Simion, Mihaela Miu, Lucia Cortojan, Irina Kleps, Lorand Savu, Mihai Danila, and Adina Bragaru ECS Transactions, October 2010; 25(31): 59-68. (OmniGrid Micro) Melanocortin 1 receptor genotype: an important determinant of the damage response of melanocytes to ultraviolet radiation. Ana Luisa Kadekaro, Sancy Leachman, Renny J. Kavanagh, Viki Swope, Pamela Cassidy, Dorothy Supp, Maureen Sartor, Viki Swope, Pamela Cassidy, Dorothy Supp, Maureen Sartor, Sandy Schwemberger, George Babcock, Kazumasa Wakamatsu, Shosuke Ito, Amy Koshoffer, Raymond E. Boissy, Prashiela Manga, Richard A. Sturm, and Zalfa A. Abdel-Malek The FASEB Journal, October 2010; 24(10): 3850-3860. http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3229421/ Impaired Wnt signaling in embryonal rhabdomyosarcoma cells from p53/c-fos double mutant mice. Shalini Singh, Charles Vinson, Cathy M. Gurley, Greg T. Nolen, Marjorie L. Beggs, Radhakrishnan Nagarajan, Erwin F. Wagner, David M. Parham, and Charlotte A. Peterson. The American Journal of Pathology, October 2010; 177(4): 2055-2066. http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2947299/ EST sequencing and gene expression profiling of cultivated peanut (Arachis hypogaea L.). Yu-Ping Bi, Wei Liu, Han Xia, Lei Su, Chuan-Zhi Zhao, Shu-Bo Wan, and Xing-Jun Wang. Genome, October 2010; 53(10): 832-839. http://www.researchgate.net/profile/Xingjun_Wang6/publication/47510578_EST_sequencing_and_gene_expression_profiling_of_cultivated_peanut_(Arachis_hypogaea_L.)/links/552ef51e0cf2acd38cbbdad1.pdf Prenatal exposure to carbon monoxide delays postnatal cardiac maturation. Laura Sartiani, Francesca Stillitano, Cristina Luceri, Silvia Suffredini, Simona Toti, Carlotta De Filippo, Vincenzo Cuomo, Maria Tattoli, Piero Dolara, Alessandro Mugelli and Elisabetta Cerbaihttp://www.nature.com/labinvest/journal/v90/n11/full/labinvest2010122a.html - aff1#aff1 Laboratory Investigation, November 2010; 90(11): 1582-1593. (OmniGrid100) http://www.nature.com/labinvest/journal/v90/n11/full/labinvest2010122a.html Development and application of bovine and porcine oligonucleotide arrays with protein-based annotation. John R. Garbe, Christine G. Elsik, Eric Antoniou, James M. Reecy, Karl J. Clark, Anand Venkatraman, Jae-Woo Kim, Robert D. Schnabel C. Michael Dickens, Russell D. Wolfinger, Scott C. Fahrenkrug, and Jeremy F. Taylor BioMed Research International, 14 December 2010; 2010: 453638, 11 pp. (OmniGrid300) http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3010673/
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Robert T. Gaeta, Suk-Young Yoo, J. C. Pires, R. W. Doerge, Z. Jeffrey Chen, and Thomas C. Osborn PLoS One, 10 March 2009; 4(3):e4760. Synchronous Elicitation of Development in Root Caps Induces Transient Gene Expression Changes Common to Legume and Gymnosperm Species. Fushi Wen, Ho Hyung Woo, Elizabeth A. Pierson, Toril D. Eldhuset, C. G. Fossdal, N. E. Nagy and Martha C. Hawes Plant Molecular Biology Reporter, March 2009; 27(1): 58-68 (OmniGrid100, OnmiGrid300) The Role of Substrates in Microarray Experimentation and How to Choose the Correct Coating for Microarraying. R. Dietrich, D. Haines, R. Redkar, and A. Rees In: Microarray Innovations: Technology and Experimentation. Gary Hardiman, Ed.; CRC Press, Boca Raton, FL; 2 April 2009, p.53-69 Microarray Quality Control. Inventors: Mansoor S. Mohammed, Natasa Dzidic US Patent Application: 20090088328 A1, Publication Date: 2 April 2009. Discovery tool with integrated microfluidic biomarker optical detection array device and methods for use. Inventors: Paolin Shen, Li Jiang, Kejung Jiang, Zhongzhong Chen US Patent Application: US 2009/0097022 A1, Publication Date: 9 April 2009 (OmniGrid Accent) http://patents.com/us-20090097022.html Genotyping Campylobacter jejuni by Comparative Genome Indexing: An Evaluation with Pulsed-Field Gel Electrophoresis and flaA SVR Sequencing. Lauren G. Pittenger, Mark D. Englen, Craig T. Parker, Jonathan G. Frye, Beatriz Quiñones, Sharon T. Horn, Insook Son, Paula J. Fedorka-Cray, Mark A. Harrison. Foodborne Pathogens and Disease, April 2009; 6(3): 337-349 Method for washing and drying pins in microarray spotting instruments. Inventors: Avery Osgood, Mack J. Schermer, Marc Silvagni (PerkinElmer LAS, Inc.) United States Patent: US 7521245 B1; Publication Date: 21 April 2009 Surface plasmon resonance imaging for parallelized detection of protein biomarkers. Marek Piliarik, Lucie Párová, Hana Vaisocherová, and Jiří Homola. Proceedings of SPIE7356 Europe Optics+ Optoelectronics, Optical Sensors 2009, Prague, 18 May 2009; 73560D Protein microarray for the analysis of human melanoma biomarkers. Patrick Domnanich, Ursula Sauer, Johanna Pultar and Claudia Preininger Sensors and Actuators B: Chemical, 20 May 2009; 139(1): 2-8 Microarray analysis of the microflora of root caries in elderly. D. Preza, I. Olsen, T. Willumsen, S. K. Boches, S. L. Cotton, B. Grinde and B. J. Paster European Journal of Clinical Microbiology & Infectious Diseases, May, 2009; 28(5): 509-517 An integrated bioinformatics approach to improve two-color microarray quality-control: impact on biological conclusions.
Rachel I. M. van Haaften, Cristina Luceri, Arie van Erk and Chris T. A. Evelo Genes & Nutrition, June, 2009; 4(2): 123-127 (OmniGrid100) http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2690723/ Significant modulation of mitochondrial electron transport system by nicotine in various rat brain regions. Ju Wang, Jong-Man Kim, David M. Donovan, Kevin G. Becker, and Ming D. Li. Mitochondrion, June 2009; 9(3): 186-195. http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2783500/ Macromolecular scaffolds for immobilizing small molecule microarrays in label-free detection of protein-ligand interactions on solid support. Y. S. Sun, J. P. Landry, Y. Y. Fei, X. D. Zhu, J. T. Luo, X. B. Wang, and K. S. Lam Analytical Chemistry, 1 July 2009; 81(13): 5373–5380. Transcriptomic and proteomic analysis of global ischemia and cardioprotection in the rabbit heart. James D. McCully, Monoj K. Bhasin, Christian Daly, Manuel C. Guerrero, Simon Dillon, Towia A. Liberman, Douglas B. Cowan, John D. Mably, Francis X. McGowan, and Sidney Levitsky Physiological Genomics, 1 July 2009; 38(2): 125–137 (OmniGrid 100) http://physiolgenomics.physiology.org/content/physiolgenomics/38/2/125.full.pdf Common effects of lithium and valproate on mitochondrial functions: protection against methamphetamine-induced mitochondrial damage. Rosilla F. Bachmann, Yun Wang, Peixiong Yuan, Rulun Zhou, Xiaoxia Li, Salvatore Alesci, Jing Du and Husseini K. Manj Int J Neuropsychopharmacology, July 2009; 12(6): 805-822 Downregulation of Notch signaling by γ-secretase inhibition can abrogate chemotherapy-induced apoptosis in T-ALL cell lines. Shuangyou Liu, Stephen Breit, Sven Danckwardt, Martina U. Muckenthaler and Andreas E. Kulozik Annals of Hematology, July 2009; 88(7): 613-621 Etablierung einer cDNA-Microarray-Technologie zur Genexpressionsanalyse bei akuter und chronischer allogener Lungenschädigung nach Lungentransplantation. Michael Brendel M.D. Thesis, Ludwig-Maximilians-Universität, München, Germany, 23 July 2009; Porous silicon used as support for protein microarray. M. Simion, L. Ruta, C. Mihailescu, I. Kleps, A. Bragaru, M. Miu, T. Ignat and Ion Baciu Superlattices and Microstructures, July-August 2009; 46(1-2): 69-76 Etablierung und Anwendung von molekular-zytogenetischen Methoden an reproduktionsgenetischen und klinisch-genetischen Fragestellungen. Christina Landwehr DrSci Theses, August 2009; Rheinischen Friedrich-Wilhelms-Universität, Bonn, 126 pp. http://hss.ulb.uni-bonn.de/2010/2085/2085.pdf Apparatus and method for dispensing fluid, semi-solid and solid samples. Inventors: John Austin, Peter D. Honkanen United States Patent: US 7585463 B2, Publication Date: 8 September 2009
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Isotope array analysis of Rhodocyclales uncovers functional redundancy and versatility in an activated sludge. Martin Hesselsoe, Stephanie Füreder, Michael Schloter, Levente Bodrossy, Niels Iversen, Peter Roslev, Per Halkjær Nielsen, Michael Wagner, and Alexander Loy. The ISME Journal, December 2009; 3(12): 1349-1364. http://www.nature.com/ismej/journal/v3/n12/pdf/ismej200978a.pdf Classification of tumors and sites in head and neck squamous-cell carcinoma. L. Ramdas, C. Mircean, J. Hofman, U. Giri, C.L. Ashorn, M.D. Story, C.D. Giurcăneanu http://www.tech.plym.ac.uk/spmc/pdf/CIMED2007/S12P4.pdf Chemical Microarrays: A New Tool for Discovery Enzyme Inhibitors. Shuguang Liang, Wei Xu, Kurumi Y. Horiuchi, Yuan Wang, and Haiching Ma. Methods Molecular Biology, 2009; 572(Ligand-Macromolecular Interactions in Drug Discovery): 149-60 (OmniGridTM) Applied Systems (at Imperial College, London) http://www3.imperial.ac.uk/pls/portallive/docs/1/179900.PDF Cisbic Infrastructure: Core Facilities. Anne Dell http://www3.imperial.ac.uk/portal/pls/portallive/docs/1/8161703.PDF 2008. A highly sensitive and specific system for large-scale gene expression profiling. Guohong Hu, Qifeng Yang, Xiangfeng Cui, Gang Yue, Marco A Azaro, Hui-Yun Wang and Honghua Li BMC Genomics, 10 January 2008; 9:9 A novel high-throughput scanning microscope for label-free detection of protein and small-molecule chemical microarrays. Fei YY, Landry JP, Sun YS, Zhu XD, Luo JT, Wang XB, Lam KS. Review of Scientific Instruments, 17 January 2008; 79(1): 013708 Antibody Profiling by Proteome Microarray Reveals the Immunogenicity of the Attenuated Smallpox Vaccine, Modified Vaccinia Virus Ankara (MVA) is Comparable to Dryvax. D. Huw Davies, Linda S. Wyatt, Frances K. Newman, Patricia L. Earl, Sookhee Chun, Jenny E. Hernandez, Douglas M. Molina, Siddiqua Hirst, Bernard Moss, Sharon E. Frey, and Philip L. Felgner J Virology, January 2008; 82(2): 652-663. Surface plasmon resonance imaging for real-time, label-free analysis of protein interactions with carbohydrate microarrays. Rositsa Karamanska, Jonathan Clarke, Ola Blixt, James I. MacRae, Jiquan Q. Zhang, Paul R. Crocker, Nicolas Laurent, Adam Wright, Sabine L. Flitsch, David A. Russell and Robert A. Field Glycoconjugate Journal, January 2008; 25(1): 69-74 Expression profiling of microRNA using oligo DNA arrays.
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Applied and Environmental Microbiology, March 2008; 74(6): 1812-1819 FK506 Binding Protein Mediates Glioma Cell Growth and Sensitivity to Rapamycin Treatment by Regulating NF-κB Signaling Pathway. Wei Jiang, Simona Cazacu, Cunli Xiang, Jean C Zenklusen, Howard A Fine, Michael Berens, Brock Armstrong, Chaya Brodie, and Tom Mikkelsen Neoplasia, March 2008; 10(3): 235–243. Transcripts of enriched germ cells responding to heat shock as potential markers for porcine semen quality. Gau BH, Chu IM, Huang MC, Yang KT, Chiou SH, Fan YH, Chen MY, Lin JH, Chuang CK, Huang SY, Lee WC. Theriogenology, 1 April 2008; 69(6): 758-766 Determination of surface tissue factor thresholds that trigger coagulation at venous and arterial shear rates: amplification of 100 fM circulating tissue factor requires flow. Uzoma M. Okorie, William S. Denney, Manash S. Chatterjee, Keith B. Neeves, Scott L. Diamond Blood, 1 April 2008; 111(7): 3507-3513 (OmniGrid Accent) http://bloodjournal.hematologylibrary.org/content/111/7/3507.long Effect of p53 genotype on gene expression profiles in murine liver. Suzanne M. Morris, Gregory S. Akerman, Varsha G. Desai, Chen-an Tsai, William H. Tolleson, William B. Melchior Jr., Chien-Ju Lin, James C. Fuscoe, Daniel A. Casciano and James J. Chen Mutation Research/Fundamental & Molecular Mechanisms of Mutagenesis, 2 April 2008; 640(1-2): 54-73 Comparative Genomic Analysis of Clinical Strains of Campylobacter jejuni from South Africa Beatriz Quiñones, Magalie R. Guilhabert, William G. Miller, Robert E. Mandrell, Albert J. Lastovica, and Craig T. Parker PLoS ONE, 23 April 2008; 3(4): e2015. Evaluation of Gene Expression in a Single Antibiotic Exposure–Derived Isolate of Salmonella enterica Typhimurium 14028 Possessing Resistance to Multiple Antibiotics.
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Hu javascript:popRef('end-a1')javascript:popRef('cn1') Biomarkers, August 2008; 13(5): 535-548. Comparison of normalization methods with microRNA microarray. You-Jia Hua, Kang Tu, Zhong-Yi Tang, Yi-Xue Li and Hua-Sheng Xiao Genomics, August 2008, 92(2): 122-128 Identification of unique molecular subdomains in the perichondrium and periosteum and their role in regulating gene expression in the underlying chondrocytes. Amitabha Bandyopadhyay, James K. Kubilus, Marsha L. Crochiere, Thomas F. Linsenmayer and Clifford J. Tabin Developmental Biology, 1 September 2008; 321(1): 162-174 http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2575053/pdf/nihms57616.pdf Mycobacterium tuberculosis Sigma Factor E Regulon Modulates the Host Inflammatory Responsehttp://www.journals.uchicago.edu/doi/abs/10.1086/591098 - fn1#fn1 Patricia A. Fontán, Virginie Aris, María E. Alvarez, Saleena Ghanny, Jeff Cheng, Patricia Soteropoulos, Analia Trevani, Richard Pine, and Issar Smith The Journal of Infectious Diseases, 15 September 2008; 198: 877–885
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and Xiao-Kui Guo BMC Genomics, 1 July 2007; 8:204 Co-localization of CENP-C and CENP-H to discontinuous domains of CENP-A chromatin at human neocentromeres. Alicia Alonso, Björn Fritz, Dan Hasson, György Abrusan, Fanny Cheung, Kinya Yoda, Bernhard Radlwimmer, Andreas G Ladurner and Peter E Warburton Genome Biology, 25 July 2007; 8: R148 Parallel micro array hybridization. Inventors: Lin Liu, Edmond, Zhongming Chen, Jiwang Chen U.S. Patent Application: US 2007/0172840 Al; Publication Date: 26 July 2007
Development and evaluation of 50-mer oligonucleotide arrays for detecting microbial populations in Acid Mine Drainages and bioleaching systems. Huaqun Yin, Linhui Cao, Guanzhou Qiu, Dianzuo Wang, Laurie Kellogg, Jizhong Zhou, Zhimin Dai and Xueduan Liu Journal of Microbiological Methods, July 2007; 70(1): 165-178 Microarray analysis of apple gene expression engaged in early fruit development. Young-Pyo Lee, Gyung-Hee Yu, Young Sam Seo, Sang Eun Han, Yeon-Ok Choi, Daeil Kim, Il-Gin Mok, Woo Taek Kim and Soon-Kee Sung Plant Cell Reports, July 2007; 26(7): 917-926. Function and Chromosomal Localization of Differentially Expressed Genes Induced by Marssonina brunnea f. sp. multigermtubi in Populus deltoids. Yanmei Zhang, Xinye Zhang, Yuchen Chen, Qi Wang, Mingxiu Wang and Minren Huang Journal of Genetics and Genomics, July 2007; 34(7): 641-648 Profiling Microdissected Epithelium and Stroma to Model Genomic Signatures for Cervical Carcinogenesis Accommodating for Covariates. David Gius, Margo C. Funk, Eric Y. Chuang, Sheng Feng, Phyllis C. Huettner, Loan Nguyen, C. Matthew Bradbury, Mark Mishra, Shuping Gao, Barbara M. Buttin, David E. Cohn, Matthew A. Powell, Neil S. Horowitz, Bradford P. Whitcomb and Janet S. Rader Cancer Research, 1 August 2007; 67(15): 7113-7123 Smokers and passive smokers gene expression profiles: Correlation with the DNA oxidation damage. Maura Lodovici, Cristina Luceri, Carlotta De Filippo, Chiara Romualdi, Franco Bambi, Piero Dolara Free Radical Biology and Medicine, 1 August 2007; 43(3): 415-422 Development and study of phage-based microarray and dot-blot Kiril Aleksandrov Vaglenov MS Thesis, Auburn University, AL, USA, 4 August 2007, pp.1-112 Method of labeling and profiling RNAs. Xueliang James Xia U.S. Patent Application: US 2008/0045418 Al; Publication Date: 6 August 2007; Sandwich-type, antibody microarrays for the detection and quantification of cardiovascular risk markers. Ozgur Gul, Ediz Calay, Ugur Sezerman, Huveyda Basaga and Yasar Gurbuz Sensors and Actuators B: Chemical, 8 August 2007; 125(2): 581-588 Diagnostic assay for Orientia tsutsugamushi by detection of responsive gene expression. Inventors: Wei-Mei Ching, Xuan Li U.S. Patent Application: US 2007/0184460 Al, Publication Date: 9 August 2007 Identification of human pathogens isolated from blood using microarray hybridisation and signal pattern recognition Herbert Wiesinger-Mayr, Klemens Vierlinger, Rudolf Pichler, Albert Kriegner, Alexander M Hirschl, Elisabeth Presterl, Levente Bodrossy and Christa Noehammer BMC Microbiology, 14 August 2007; 7: 78
Gene expression in pyriproxyfen- resistant Bemisia tabaci Q biotype. Ghanim, Murad; Kontsedalov, Svetlana Pest Management Science, August 2007; 63(8): 776-783(8) Escherichia coli O157:H7 gene expression in the presence of catecholamine norepinephrine. Dowd, Scot E FEMS Microbiology Letters, August 2007; 273(2): 214-223 An overview of current microarray-based human globin gene mutation detection methods.
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Synodinos Hemoglobin, August 2007; 31(3): 289-311
Perinatal Increases in TGF- Disrupt the Saccular Phase of Lung Morphogenesis & Cause Remodeling: Microarray Analysis. Elizabeth L. Kramer, Gail H Deutsch, Maureen A Sartor, William D Hardie, Machiko Ikegami, Thomas R. Korfhagen, and Timothy D. Le Cras Am J Physiology - Lung Cellular and Molecular Physiology, August 2007; 293(2): L314-L327 Development of a cDNA microarray to identify gene expression of Puccinellia tenuiflora under saline–alkali stress. Yucheng Wang, Chuanping Yang, Guifeng Liu and Jing Jiang Plant Physiology and Biochemistry, August 2007; 45(8): 567-576 Microarray analysis of flax (Linum usitatissimum L.) stems identifies transcripts enriched in fibre-bearing phloem tissues. Melissa J. Roach and Michael K. Deyholos Mol Genetics Genomics, August 2007; 278(2): 149-165. Decitabine Up-regulates S100A2 Expression and Synergizes with IFN-; to Kill Uveal Melanoma Cells. Jared A. Gollob and Catherine J. Sciambi Clin Cancer Research, 1 September 2007; 13(17): 5219-5225 A honey bee odorant receptor for the queen substance 9-oxo-2-decenoic acid. Kevin W. Wanner, Andrew S. Nichols, Kimberly K. O. Walden, Axel Brockmann, Charles W. Luetje, and Hugh M. Robertson Proc Natl Academy Sciences U S A, 4 September 2007; 104(36): 14383-14388. Social defeat, a paradigm of depression in rats that elicits 22-kHz vocalizations, preferentially activates the cholinergic signaling pathway in the periaqueductal gray. Roger A. Kroes, Jeffrey Burgdorf, Nigel J. Otto, Jaak Panksepp and Joseph R. Moskal Behavioural Brain Research, 4 September 2007; 182(2): 290-300 Transcriptional regulatory analysis reveals PDR3 and GCR1 as regulators of significantly induced genes by 5-hydroxymethylfurfural stress involved in bioethanol conversion for ethanologenic yeast Saccharomyces cerevisiae. Zonglin Liu, Sarah Sinha Microarray Gene Expression Data Society (MGED 9) Meeting, 7 September 2007; Abstract Quantitative measurement of pathogen specific human memory T cell repertoire diversity using a CDR3β-specific microarray. Xujing Wang, Shuang Jia, Lisa Meyer, Maryam B Yassai, Yuri N Naumov, Jack Gorski, and Martin J Hessner BMC Genomics, 19 September 2007; 8: 329. Development of mitochondria-specific mouse oligonucleotide microarray and validation of data by real-time PCR. Varsha G. Desai, Taewon Lee, Robert R. Delongchamp, Carrie L. Moland, William S. Branham, James C. Fuscoe and Julian E.A. Leakey Mitochondrion, September 2007; 7(5): 322-329 Differential Expression of miRNAs in Papillary Thyroid Carcinoma Compared to Multinodular Goiter Using Formalin Fixed Paraffin Embedded Tissues.
Michael T. Tetzlaff, Aihua Liu, Xiaowei Xu, Stephen R. Master, Don A. Baldwin, John W. Tobias, Virginia A. Livolsi and Zubair W. Baloch Endocrine Pathology, September 2007; 18(3): 163-173 Technical note: Bovine oviduct and endometrium array version 1: a tailored tool for studying bovine endometrium biology and pathophysiology. Bauersachs S, Mitko K, Blum H, Wolf E. J Dairy Science, September 2007; 90(9): 4420-4423. Microarray and suppression subtractive hybridization analyses of gene expression in Puccinellia tenuiflora after exposure to NaHCO3 Yucheng Wang, Chuanping Yang, Guifeng Liu, Guodong Zhang and Qiaoying Ban Plant Science, September 2007; 173(3): 309-320 Differentially expressed transcripts in shell glands from low and high egg production strains of chickens using cDNA microarrays. Kuo-Tai Yang, Chia-Yu Lin, Jong-Shian Liou, Yi-Hsing Fan, Shiow-Her Chiou, Chang-Wen Huang, Chean-Ping Wu, En-Chung Lin, Chih-Feng Chen, Yen-Pai Lee, Wen-Chuan Lee, Shih-Torng Ding, Winston Teng-Kuei Cheng and Mu-Chiou Huang Animal Reproduction Science, September 2007; 101(1-2): 113-124 Effect of Surface Parameters on the Performance of IgG-Arrayed Hydrogel Chips: A Comprehensive Study. Katarzyna Derwinska, Levi A. Gheber, Ursula Sauer, Leopold Schorn, and Claudia Preininger Langmuir, 9 October 2007; 23(21): 10551-10558. Reproducibility of hydrogel slides in on-chip immunoassays with respect to scanning mode, spot circularity, and data filtering Katarzyna Derwinska, Ursula Sauer and Claudia Preininger Analytical Biochemistry, 1 November 2007; 370(1): 38-46 Microarrays in Drug Discovery and Development. Krishnanand D. Kumble and Sarita Kumble In: Handbook of Pharmaceutical Biotechnology, Shayne Cox Gad, Ed.; John Wiley & Sons Interscience Inc., 6 November 2007; p. 633-660 Candidate genes controlling pulmonary function in mice: transcript profiling and predicted protein structure. Koustav Ganguly, Tobias Stoeger , Scott C. Wesselkamper, Claudia Reinhard, Maureen A. Sartor, Mario Medvedovic, Craig R. Tomlinson, Ines Bolle, John M. Mason, George D. Leikauf and Holger Schulz Physiological Genomics, 14 November 2007; 31(3):410-421 Methods for treating or preventing disorders using ecdysteroid compositions. Inventors: Jonathan Gorelik-Feldman,Ilya Raskin U.S. Patent Application: US 2007/0265235 Al, Publication Date: 15 November 2007 Gene expression profiling reveals underlying molecular mechanisms of the early stages of tamoxifen-induced rat hepatocarcinogenesis. Igor P. Pogribny, Tetyana V. Bagnyukova, Volodymyr P. Tryndyak, Levan Muskhelishvili, Rocio Rodriguez-Juarez, Olga Kovalchuk, Tao Han, James C. Fuscoe, Sharon A. Ross, Frederick A. Beland
Toxicology and Applied Pharmacology, 15 November 2007; 225(1): 61-69 Angiocentric Glioma: Report of Clinico-Pathologic and Genetic Findings in 8 Cases. Matthias Preusser, Alexander Hoischen, Klaus Novak, Thomas Czech, Daniela Prayer, Johannes A. Hainfellner, Christoph Baumgartner, Friedrich G. Woermann, Ingrid E. Tuxhorn, Heinz W. Pannek, Markus Bergmann, Bernhard Radlwimmer, Rafael Villagrán, Ruthild G. Weber, Hans Volkmar The American Journal of Surgical Pathology, November 2007; 31(11): 1709-1718
Transcriptional Regulation of the Respiratory Genes in the Cyanobacterium Synechocystis sp. PCC 6803 during the Early Response to Glucose Feeding Sanghyeob Lee, Jee-Youn Ryu, Soo Youn Kim, Jae-Heung Jeon, Ji Young Song, Hyung-Taeg Cho, Sang-Bong Choi, Doil Choi, Nicole Tandeau de Marsac and Youn-Il Park Plant Physiology, November 2007; 145(3): 1018-1030 http://www.jstor.org/stable/pdf/40065741.pdf?seq=1#page_scan_tab_contents Host Gene Expression Profiling of Dengue Virus Infection in Cell Lines and Patients. Joshua Fink, Feng Gu, Ling Ling, Thomas Tolfvenstam, Farzad Olfat, Keh Chuang Chin, Pauline Aw, Joshy George, Vladimir A. Kuznetsov, Mark Schreiber, Subhash G. Vasudevan, and Martin L. Hibberd PLoS Neglected Tropical Diseases, November 2007; 1(2): e86. Unique Bisphenol A Transcriptome in Prostate Cancer: Novel Effects on ERβ Expression That Correspond to Androgen Receptor Mutation Status. Janet K. Hess-Wilson, Siobhan L. Webb, Hannah K. Daly, Yuet-Kin Leung, Joanne Boldison, Clay ES Comstock, Maureen A. Sartor, Shuk-Mei Ho, and Karen E. Knudsen. Environmental Health Perspectives, November 2007; 115(11): 1646-1653 cDNA Microarray Analyses Reveal Candidate Marker Genes for the Detection of Ascidian Disease in Korea. Kaoru Azumi, Takeshi Usami, Akiko Kamimura, Sorin V. Sabau, Yasufumi Miki, Manabu Fujie, Sung-Ju Jung, Shin-Ichi Kitamura, Satoru Suzuki, and Hideyoshi Yokosawa Zoological Science, December 2007; 24(12): 1231-1240. Transcriptional profile induced by furazolidone treatment of Shigella flexneri. Hua Fu, Wenchuan Leng, Jing Wang, Wenliang Zhang, Junping Peng, Lingling Wang and Qi Jin Applied Microbiology and Biotechnology, December 2007; 77(3): 657-667 Analysis of gene expression profiles in response to Sclerotinia sclerotiorum in Brassica napus. Jianwei Zhao, Jianlin Wang, Lingling An, R. W. Doerge, Z. Jeffrey Chen, Craig R. Grau, Jinling Meng and Thomas C. Osborn Planta, December 2007; 227(1): 13-24 Antibody Microarray for Cardiovascular Risk Markers. (Poster, Sabanci University, Orhanli-Tuzla, Istanbul) Ozgur Gul, Ediz Calay, Can Timucin, Deniz Saltukoglu, Yasar Gurbuz, Ozgur Kutuk, Huveyda Basaga 2007; http://students.sabanciuniv.edu/~ecalay/grad.pdf Protein binding microarrays for the characterization of DNA-protein interactions. Martha L. Bulyk Adv Biochem Engineering Biotechnology, 2007; 104: 65–85; available in PMC 2009 August 17.
Protein binding microarrays for the characterization of DNA-protein interactions. Martha L. Bulyk In: Analytics of protein-DNA interactions, Advances in biochemical engineering/biotechnology, Harald Seitz, ed., Springer-Verlag, Berlin-Heidelberg, 2007; 104: 65-85 Protein Microarray-Based Screening of Antibody Specificity. Rhonda Bangham, Gregory A. Michaud, Barry Schweitzer and Paul F. Predki Methods in Molecular Medicine, Microarrays in Clinical Diagnostics, 2007; 114: 173-182 The FAST Guide to Protein Microarrays. Michael Walther, Brett Stillman, Andrea Friße and Jens Beator Manual Publication, Whatman GmbH, 2007; p.1-27 2006. A new method to remove hybridization bias for interspecies comparison of global gene expression profiles uncovers an association between mRNA sequence divergence and differential gene expression in Xenopus. Maureen A. Sartor, Aaron M. Zorn, Jennifer A. Schwanekamp, Danielle Halbleib, Saikumar Karyala, Michael L. Howell, Gary E. Dean, Mario Medvedovic and Craig R. Tomlinson Nucleic Acids Research, 5 January 2006 (online); 34(1): 185-200 DNA profiling and SNP detection utilizing microarrays. Inventors: Jennifer T. Kemp, Shan X. Wang, Chris D. Webb, Robert L. White, U.S. Patent Application: US 2006/0008823 Al; Publication Date: 12 January 2006 The Gene Expression Program of Prostate Fibroblast Senescence Modulates Neoplastic Epithelial Cell Proliferation through Paracrine Mechanisms. Claes Bavik, Ilsa Coleman, James P. Dean, Beatrice Knudsen, Steven Plymate and Peter S. Nelson Cancer Research, 15 January 2006; 66(2): 794-802 Modeling depression: social dominance–submission gene expression patterns in rat neocortex. Kroes RA, Panksepp J, Burgdorf J, Otto NJ, Moskal JR Neuroscience, January 2006; 137(1): 37-49 Transcript analysis of early nodulation events in Medicago truncatula. Dasharath Prasad Lohar, Natalya Sharopova, Gabriella Endre, Silvia Peñuela, Deborah Samac, Christopher Town, Kevin A.T. Silverstein and Kathryn A. VandenBosch Plant Physiology, January 2006; 140(1): 221-234. The Role of Metallothionein in the Pathogenesis of Acute Lung Injury. Scott C. Wesselkamper, Susan A. McDowell, Mario Medvedovic, Timothy P. Dalton, Hitesh S. Deshmukh, Maureen A. Sartor, Lisa M. Case, Lisa N. Henning, Michael T. Borchers, Craig R. Tomlinson, Daniel R. Prows, and George D. Leikauf Am J Respir Cell Molecular Biology, January 2006; 34(1): 73–82.
Expression Profiling of Crystal-Induced Injury in Human Kidney Epithelial Cells. Li Liang, Jianmin Chen, Ragini Vittal, Zachariah E. Selvanayagam, James A. McAteer, Li Deng, Jay Tischfield, Khew-Voon Chin, Amrik Sahota Nephron Physiology, January 2006; 103(1): p53-p62 Identification of Endometrial Genes Regulated by Early Pregnancy, Progesterone, and Interferon Tau in the Ovine Uterus. C. Allison Gray, Colette A. Abbey, Phillip D. Beremand, Youngsok Choi, Jennifer L. Farmer, David L. Adelson, Terry L. Thomas, Fuller W. Bazer and Thomas E. Spencer Biology of Reproduction, 1 February 2006; 74(2): 383-394 Bacterial cell microarrays for the detection and characterization of antibodies against surface antigens. N.R. Thirumalapura, A. Ramachandran, R.J. Morton and J.R. Malayer Journal of Immunological Methods, 20 February 2006; 309(1-2): 48-54 Assessment of Interactions among Viruses Infecting Sweetpotato. Kokkinos, Charalambos D. Ph. D. Theses, Louisiana State University, 22 February 2006; p.1-134 Developmental and gene expression analyses of a cotton naked seed mutant. Jinsuk J. Lee, Osama S. S. Hassan, Wenxilang Gao, Ning E. Wei, Russell J. Kohel, Xiao-Ya Chen, Paxton Payton, Sing-Hoi Sze, David M. Stelly and Z. Jeffrey Chen Planta, February 2006; 223(3): 418-432 Using DNA microarray to study human cytomegalovirus gene expression. Shaojun Yang, Saleena Ghanny, Weijia Wang, Anthony Galante, Walter Dunn, Fenyong Liu, Patricia Soteropoulos and Hua Zhu Journal of Virological Methods, February 2006; 131(2): 202-208 DNA microarray detection of antimicrobial resistance genes in diverse bacteria. Jonathan G. Frye, Troy Jesse, Fred Long, Gaelle Rondeau, Steffen Porwollik, Michael McClelland, Charlene R. Jackson, Mark Englen and Paula J. Fedorka-Cray International Journal of Antimicrobial Agents, February 2006; 27(2): 138-151 SimArray: a user-friendly and user-configurable microarray design tool. Richard P Auburn, Roslin R Russell, Bettina Fischer, Lisa A Meadows, Santiago Sevillano Matilla and Steven Russell BMC Bioinformatics, 1 March 2006; 7: 102 Identification of rat lung – prominent genes by a parallel DNA microarray hybridization. Zhongming Chen, Jiwang Chen, Tingting Weng, Nili Jin and Lin Liu BMC Genomics, 13 March 2006; 7: 47 E-cadherin transcriptional downregulation by promoter methylation but not mutation is related to epithelial-to-mesenchymal transition in breast cancer cell lines. M Lombaerts, T van Wezel, K Philippo, J W F Dierssen, R M E Zimmerman, J Oosting, R van Eijk, P H Eilers, B van de Water, C J Cornelisse, and A-M Cleton-Jansen British J Cancer, 13 March 2006; 94(5): 661–671.
Replication of DNA microarrays from zip code masters. Haohao Lin, Joohoon Kim, Li Sun, and Richard M. Crooks J Am Chemical Society, 15 March 2006; 128(10): 3268-3272. Evaluation of MetriGenix custom 4D™ arrays applied for detection of breast cancer subtypes. Aslaug Aamodt Muggerud, Hilde Johnsen, Debra A Barnes, Adam Steel, Per Eystein Lønning, Bjørn Naume, Therese Sørlie and Anne-Lise Børresen-Dale BMC Cancer, 15 March 2006; 6:59 Technical Issues Involved in Obtaining Reliable Data from Microarray Experiments. James C. Fuscoe, William S. Branham, Cathy D. Melvin, Varsha G. Desai, Carrie L. Moland, Tao Han, Leming Shi, Weida Tong, Adam T. Scully and Robert R. Delongchamp Regulatory Research Perspectives, March 2006; 6(1):1-22 (PDF - 1104KB) Abnormal Gene Expression Profiles in Unaffected Parents of Patients with Hereditary-Type Retinoblastoma. Eric Y. Chuang, Xi Chen, Mong-Hsun Tsai, Hailing Yan, Chuan-Yuan Li, James B. Mitchell, Hatsumi Nagasawa, Paul F. Wilson, Yuanlin Peng, Markus M. Fitzek, Joel S. Bedford, John B. Little Cancer Research, 1 April 2006; 66(7): 3428-3433
Comparative analysis of Saccharomyces cerevisiae WW domains and their interacting proteins Jay R Hesselberth, John P Miller, Anna Golob, Jason E Stajich, Gregory A Michaud, Stanley Fields Genome Biology, 10 April 2006; 7: R30 In vivo – in vitro toxicogenomic comparison of TCDD-elicited gene expression in Hepa1c1c7 mouse hepatoma cells and C57BL/6 hepatic tissue. Edward Dere, Darrell R Boverhof, Lyle D Burgoon, and Timothy R Zacharewski BMC Genomics; 12 April 2006; 7: 80. An antibody-based microarray assay for small RNA detection. Zonglin Hu, Aixia Zhang, Gisela Storz, Susan Gottesman and Stephen H. Leppla Nucleic Acids Research, 13 April 2006; 34(7): e52. Novel microarray techniques for nucleic acid expression analyses. Inventors: Zissimos Mourelatos, Peter T. Nelson, U.S. Patent Application: US 2006/0078925 Al; Pubication Date: 13 April 2006; Differential Expression and Detection of Transcripts in Sweetpotato (Ipomoea batatas (L.) Lam.) Using cDNA Microarrays. McGregor, Cecilia E. Ph.D. Thesis, Louisiana State University, 24 April 2006; p. 1-132 Real-time pcr micro array based on evanescent wave biosensor. Inventor: Liang Xu Patent Application Publication NO.: US 2006/0088844 Al; Pub. Date: 27 April 2006 Identification of expression profiles of sorghum genes in response to greenbug phloem-feeding using cDNA subtraction and microarray analysis. Sung-Jin Park, Yinghua Huang and Patricia Ayoubi Planta, April 2006; 223(5): 932-947
Development of a comprehensive detection method for medicinal and toxic plant species. Roger A. Barthelson, Padma Sundareshan, David W. Galbraith and Raymond L. Woosley American Journal of Botany, April 2006; 93(4): 566-574. A novel technique for identifying and characterizing strains of avian influenza virus. Ida Ho Ting Chung B.S. Thesis, University of Delaware Spring 2006; p. 1-63 Assessing the reliability of amplified RNA used in microarrays: a DUMB table approach. Edward D Bearden; Pippa M Simpson; Charlotte A Peterson; Marjorie L Beggs Applied Bioinformatics, Spring 2006; 5(2): 67-76. Method for providing protein microarrays. Inventors: Paul F. Predki, Barry Schweitzer Patent Application Publication NO.: US 2006/0099704 Al; Pub. Date: 11 May 2006 Diagnostic assay for Rickettsia prowazekii disease by detection of responsive gene expression. Inventors: Wei-Mei Ching, Hong Ge Patent Application Publication NO.: US 2006/0099628 Al, Pub. Date: 11 May 2006; Gene expression profiling during cellular differentiation in the embryonic pituitary gland using cDNA microarrays. Laura E. Ellestad, Wilfrid Carre, Michael Muchow, Sultan A. Jenkins, Xiaofei Wang, Larry A. Cogburn and Tom E. Porter Physiological Genomics, 16 May 2006; 25(3): 414-425 A sensitive array for microRNA expression profiling (miChip) based on locked nucleic acids (LNA). Mirco Castoldi , Sabine Schmidt, Vladimir Benes, Mikkel Noerholm, Andreas E. Kulozik , Matthias W. Hentze, and Martina U. Muckenthaler RNA, May 2006; 12(5): 913-920 Dioxin Induces an Estrogen-Like, Estrogen Receptor-Dependent Gene Expression Response in the Murine Uterus Darrell R. Boverhof, Joshua C. Kwekel, Daryl G. Humes, Lyle D. Burgoon, Timothy R. Zacharewski Molecular Pharmacology, May 2006; 69(5): 1599-1606 Functional screening for proapoptotic genes by reverse transfection cell array technology. Otto Mannherz, Daniel Mertens, Meinhard Hahn and Peter Lichter Genomics, May 2006; 87(5): 665-672 DNA and protein sensor arrays. Claudia Preininger In: NATO Science Series, Optical Chemical Sensors, part 2, Springer Netherlands, May 2006; 224: 479-500 Comparison of 12 Reference Genes for Normalization of Gene Expression Levels in Epstein-Barr Virus-Transformed Lymphoblastoid Cell Lines and Fibroblasts. Arjan P.M de Brouwer, Hans van Bokhoven, Hannie Kremer Molecular Diagnosis & Therapy, May-June 2006; 10(3): 197-204
Distinct effects of ionizing radiation on in vivo murine kidney and brain normal tissue gene expression. Weiling Zhao, Eric Y. Chuang, Mark Mishra, Rania Awwad, Kheem Bisht, Lunching Sun, Phuongmai Nguyen, J. Daniel Pennington, Tony Jau Cheng Wang, C. Matthew Bradbury, Lei Huang, Zhijun Chen, Gil Bar-Sela, Michael E.C. Robbins and David Gius Clin Cancer Research, 15 June 2006; 12(12): 3823-3830. Nucleic acid arrays. Inventors: Mansoor S. Mohammed, Natasa Dzidic U.S. Patent Application Publication: US 2006/0127918 Al, Pub. Date: 15 June 2006 A Homogenous Microarray for Enzymatic Functional Assays: Chemical Compounds Microarray Haiching Ma, Yuan Wang, Amy S. Pomaybo and Connie Tsai In: Frontiers in Biochip Technology, Wan-Li Xing and Jing Cheng eds., Springer, 18 June 2006; part 1, p. 3-18 Microarray analysis of Bacillus cereus group virulence factors. Nikolay Sergeev, Margaret Distler, Melany Vargas, Vladimir Chizhikov, Keith E. Herold and Avraham Rasooly Journal of Microbiological Methods, June 2006; 65(3): 488-502 Expression profiling of auxin-treated Arabidopsis roots: toward a molecular analysis of lateral root emergence. Marta Laskowski, Steven Biller, Ken Stanley, Tymoteusz Kajstura and Reeta Prusty Plant Cell Physiology, June 2006; 47(6): 788-792 Embryoid Body–Mediated Differentiation of Mouse Embryonic Stem Cells Along a Hepatocyte Lineage: Insights from Gene Expression Profiles. Eric I. Novik, Tim J. Maguire, Ksenia Orlova, Rene S. Schloss, Martin L. Yarmush. Tissue Engineering, June 2006; 12(6): 1515-1525. Simple and effective method for generating single-stranded DNA targets and probes. Xing Tang, Sheldon L. Morris, John J. Langone, and Larry E. Bockstahler BioTechniques, June 2006; 40(6): 759-763. The effects of different sample labelling methods on signal intensities of a 60-mer diagnostic microarray. Xiao-Yang Mo, Wen-Li Ma, Ling Li, Qiu-Lin Xu, Ya-Li Zhang and Wen-Ling Zheng Journal of Virological Methods, June 2006; 134(1-2): 36-40 The Arabidopsis thaliana Transcriptome in Response to Agrobacterium tumefaciens. Renata F. Ditt, Kathleen F. Kerr, Paul de Figueiredo, Jeff Delrow, Luca Comai,javascript:popRef('c1') Eugene W. Nester Molecular Plant-Microbe Interaction, June 2006; 19(6): 665-681 Interaction of bifidobacteria with Caco-2 cells—adhesion and impact on expression profiles. Christian U. Riedel, Francis Foata, Darlene R. Goldstein, Stephanie Blum and Bernhard J. Eikmanns International Journal of Food Microbiology,1 July 2006; 110(1): 62-68
Identification of humoral immune responses in protein microarrays using DNA microarray data analysis techniques. Suman Sundaresh, Denise L. Doolan, Siddiqua Hirst, Yunxiang Mu, Berkay Unal, D. Huw Davies, Philip L. Felgner and Pierre Baldi Bioinformatics, 15 July 2006; 22(14):1760-1766 Growth of Escherichia coli MG1655 on LB medium: monitoring utilization of sugars, alcohols, and organic acids with transcriptional microarrays. Mark V. Baev, Dmitry Baev, Agnes Jansco Radek and John W. Campbell Applied Microbiology and Biotechnology, July 2006; 71(3): 310-316 Microarray analysis of transcript accumulation during perithecium development in the filamentous fungus Gibberella zeae (anamorph Fusarium graminearum). Weihong Qi, Chil Kwon and Frances Trail Molecular Genetics and Genomics, July 2006; 276(1): 87-100 Growth of Escherichia coli MG1655 on LB medium: monitoring utilization of amino acids, peptides, and nucleotides with transcriptional microarrays. Mark V. Baev, Dmitry Baev, Agnes Jansco Radek and John W. Campbell Applied Microbiology and Biotechnology, July 2006; 71(3): 317-322 Experimental Confirmation of Global Murine Cytomegalovirus Open Reading Frames by Transcriptional Detection and Partial Characterization of Newly Described Gene Products. Qiyi Tang, Eain A. Murphy, and Gerd G. Maul Journal of Virology, July 2006; 80(14): 6873-6882 Comprehensive quality control utilizing the prehybridization third-dye image leads to accurate gene expression measurements by cDNA microarrays. Xujing Wang, Shuang Jia, Lisa Meyer, Bixia Xiang, Li-Yen Chen, Nan Jiang, Carol Moreno, Howard J Jacob, Soumitra Ghosh and Martin J Hessner BMC Bioinformatics, 14 August 2006; 7:378 Disclosure of Candidate Genes in Acute Myeloid Leukemia With Complex Karyotypes Using Microarray-Based Molecular Characterization. Frank G. Rücker, Lars Bullinger, Carsten Schwaenen, Daniel B. Lipka, Swen Wessendorf, Stefan Fröhling, Martin Bentz, Simone Miller, Claudia Scholl, Richard F. Schlenk, Bernhard Radlwimmer, Hans A. Kestler, Jonathan R. Pollack, Peter Lichter, Konstanze Döhner, Hartmut Döhner Journal of Clinical Oncology, 20 August 2006; 24(24): 3887-3894 Making and Using Spotted DNA Microarrays in an Academic Core Laboratory. Janet Hager Methods Enzymology, DNA Microarrays, Part A: Array Platforms and Wet-Bench Protocols, August 2006; 410: 135-146 Analysis of the Sequence Specificities of DNA Binding Proteins with Protein Binding Microarrays. Martha L. Bulyk
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Novel multiple 5′-amino-modified primer for DNA microarrays. Jing Han, Hin Lee, Nga Yen Nguyen, Serge L. Beaucage and Raj K. Puri Genomics, August 2005; 86(2): 252-258 Simultaneous Detection of Four Human Pathogenic Microsporidian Species from Clinical Samples by Oligonucleotide Microarray. Zheng Wang, Palmer A. Orlandi, and David A. Stenger Journal of Clinical Microbiology, August 2005; 43(8): 4121-4128 Evaluating whole genome amplification via multiply-primed rolling circle amplification for SNP genotyping of samples with low DNA yield. Kaisa Silander, Kati Komulainen, Pekka Ellonen, Minttu Jussila, Mervi Alanne, Minna Levander, Päivi Tainola, Kari Kuulasmaa, Veikko Salomaa, Markus Perola, Leena Peltonen, Janna Saarela Twin Res Human Genetics, August 2005; 8(4): 368-375. Arrayed Nanohydrogels for Protein Array Technology. Saaem, V. Papasotiropoulos, T. Wang, P. Soteropoulos, M. Libera Materials Research Society Proceedings, Fall 2005; Paper #: 0897-J06-07 Quantum dots-based reverse phase protein microarray. Masato Shingyoji, Daniele Gerion, Dan Pinkel, Joe W. Gray and Fanqing Chen Talanta, 15 September 2005; 67(3): 472-478 Expression Profiles of Osteosarcoma That Can Predict Response to Chemotherapy. Tsz-Kwong Man, Murali Chintagumpala, Jaya Visvanathan, Jianhe Shen, Laszlo Perlaky, John Hicks, Mark Johnson, Nelson Davino, Jeffrey Murray, Lee Helman, William Meyer, Timothy Triche, Kwong-Kwok Wong and Ching C. Lau Cancer Research, 15 September 2005; 65(18): 8142-8150 Global gene expression analysis of two Streptococcus thermophilus bacteriophages using DNA microarray. Martin Duplessis, W. Michael Russell, Dennis A. Romero and Sylvain Moineau Virology, 30 September 2005; 340(2): 192-208 Peroxisome Proliferator-activated Receptor-γ Co-activator 1α-mediated Metabolic Remodeling of Skeletal Myocytes Mimics Exercise Training and Reverses Lipid-induced Mitochondrial Inefficiency. Timothy R. Koves, Ping Li, Jie An, Takayuki Akimoto, Dorothy Slentz, Olga Ilkayeva, G. Lynis Dohm, Zhen Yan, Christopher B. Newgard and Deborah M. Muoio J Biol Chemistry, 30 September 2005; 280(39): 33588-33598. Identification of a subtelomeric gene family expressed during the asexual–sexual stage transition in Plasmodium falciparum. Saliha Eksi, Yoseph Haile, Tetsuya Furuya, Liang Ma, Xinzhuan Su and Kim C. Williamson Molecular and Biochemical Parasitology, September 2005; 143(1): 90-99 The Potential of Genomic Approaches to Rotifer Ecology. David B. Mark Welch and Jessica L. Mark Welch Hydrobiologia, September 2005; 546(1): 101-108
Extremely Low-Frequency Electromagnetic Fields do not Affect DNA Damage and Gene Expression Profiles of Yeast and Human Lymphocytes. Cristina Luceri, Carlotta De Filippo, Lisa Giovannelli, Marta Blangiardo, Duccio Cavalieri, Filippo Aglietti, Monica Pampaloni, Daniele Andreuccetti, Lapo Pieri, Franco Bambi, Annibale Biggeri, and Piero Dolara Radiation Research, September 2005; 164(3): 277-285. Vaccinia Virus H3L Envelope Protein Is a Major Target of Neutralizing Antibodies in Humans and Elicits Protection against Lethal Challenge in Mice. D. Huw Davies, Megan M. McCausland, Conrad Valdez, Devan Huynh, Jenny E. Hernandez, Yunxiang Mu, Siddiqua Hirst, Luis Villarreal, Philip L. Felgner, and Shane Crotty
Journal of Virology, September 2005; 79(18): 11724-11733. A novel method for STR-based DNA profiling using microarrays. Kemp JT, Davis RW, White RL, Wang SX, Webb CD. J Forensic Sciences, September 2005; 50(5): 1109-1113. Genomic and expression array profiling of chromosome 20q amplicon in human colon cancer cells. Jennifer I Carter, Li Jin, Subrata Sen Indian J Human Genetics, September-December 2005; 11(3): 128-134 Gene Expression Changes and Signaling Events Associated with the Direct Antimelanoma Effect of IFN- . Jared A. Gollob, Catherine J. Sciambi, Zhiqing Huang and Holly K. Dressman Cancer Research, 1 October 2005; 65(19): 8869-8877 Comparison of the gene expression profile of undifferentiated human embryonic stem cell lines and differentiating embryoid bodies. Bhaskar Bhattacharya, Jingli Cai, Youngquan Luo, Takumi Miura, Josef Mejido, Sandii N Brimble, Xianmin Zeng, Thomas C Schulz, Mahendra S Rao and Raj K Puri BMC Developmental Biology, 5 October 2005; 5: 22 Gene expression profiling of gilthead sea bream during early development and detection of stress-related genes by the application of cDNA microarray technology. Elena Sarropoulou, Georgios Kotoulas, Deborah M. Power and Robert Geisler Physiol Genomics, 17 October 2005; 23(2): 182-191. Ability to differentiate between cp and ncp BVDV by microarrays: Towards an application in clinical veterinary medicine? Dirk Werling, Andriy Ruryk, Judith Heaney, Eva Moeller and Joe Brownlie Veterinary Immunology and Immunopathology, 18 October 2005; 108(1-2): 157-164 Identification of Gene Expression Patterns for a Molecular Diagnosis of Kidney Tumors. Holger Sueltmann, Andreas Buness, Markus Ruschhaupt, Wolfgang Huber, Ruprecht Kuner, Bastian Gunawan, Laszlo Fuezesi, Annemarie Poustka In: DNA Microarrays, Ulrike Nuber Ed., Taylor and Francis, 20 October 2005; p.39-47. Molecular Karyotyping by Means of Array CGH: Linking Gene Dosage Alterations to Disease Phenotypes. Joris Veltman, Lisenka Vissers In: DNA Microarrays, Ulrike Nuber Ed., Taylor and Francis, 20 October 2005; p.139-145.
Diagnostic Genome Profiling in Mental Retardation. Bert B.A. de Vries, Rolph Pfundt, Martijn Leisink, David A. Koolen, Lisenka E.L.M. Vissers, Irene M. Janssen, Simon van Reijmersdal, Willy M. Nillesen, Erik H.L.P.G. Huys, Nicole de Leeuw, Dominique Smeets, Erik A. Sistermans, Ton Feuth, Conny M.A. van Ravenswaaij-Arts, Ad Geurts van Kessel, Eric F.P.M. Schoenmakers, Han G. Brunner and Joris A. Veltman The American Journal of Human Genetics, October 2005; 77(4): 606-616 Optimizing processing parameters for signal enhancement of oligonucleotide and protein arrays on ARChip Epoxy. C. Preininger, U. Sauer, J. Dayteg and R. Pichler Bioelectrochemistry, October 2005; 67(2): 155-162 Design, optimization and validation of genomic DNA microarrays for examining the Clostridium acetobutylicum transcriptome. Keith V. Alsaker, Carlos J. Paredes and Eleftherios T. Papoutsakis Biotechnology and Bioprocess Engineering, October 2005; 10(5): 432-443 Production of custom microarrays for neuroscience research. Samuel S. Newton, Alicia Bennett and Ronald S. Duman Methods, November 2005; 37(3): 238-246 Genomic Analysis of Anti-Hepatitis B Virus (HBV) Activity by Small Interfering RNA and Lamivudine in Stable HBV-Producing Cells. Yong Guo, Hongyan Guo, Liang Zhang, Hongying Xie, Xin Zhao, Fangxun Wang, Ze Li, Yahui Wang, Shiliang Ma, Jiaping Tao, Weixing Wang, Yuxiang Zhou, Weiping Yang, and Jing Cheng Journal of Virology, November 2005; 79(22): 14392-14403 Analysis of calcium-inducible genes in keratinocytes using suppression subtractive hybridization and cDNA microarray. Eun-Young Seo, Jung-Hyun Namkung, Kyu-Mi Lee, Woong-Hee Lee, Myung Im, Sun-Ho Kee, Geon Tae Park, Jun-Mo Yang, Young-Joon Seo, Jang-Kyu Park, Chang Deok Kim, Jeung-Hoon Lee Genomics, November 2005; 86(5): 528-538 Red wine polyphenols influence carcinogenesis, intestinal microflora, oxidative damage and gene expression profiles of colonic mucosa in F344 rats. Piero Dolara, Cristina Luceri, Carlotta De Filippo, Angelo Pietro Femia, Lisa Giovannelli, Giovanna Caderni, Cinzia Cecchini, Stefania Silvi, Carla Orpianesi and Alberto Cresci Mutation Research/Fundamental and Molecular Mechanisms of Mutagenesis, 11 December 2005; 591(1-2): 237-246 Human and mouse oligonucleotide-based array CGH. Paul van den IJssel, Marianne Tijssen, Suet-Feung Chin, Paul Eijk, Beatriz Carvalho, Erik Hopmans, Henne Holstege, Dhinoth Kumar Bangarusamy, Jos Jonkers, Gerrit A. Meijer, Carlos Caldas and Bauke Ylstra Nucleic Acids Research, 16 December 2005; 33(22): e192 High capacity microarray dispensing. Inventors: Brian L. Ganz; Mandel W. Mickley; John Andrew Moulds; Chritopher T. Brovold Patent No. US 6,979,425 Bl (45), Date of Patent: 27 December 2005
Microarray-based global differential expression profiling of P450 monooxygenases and regulatory proteins for signal transduction pathways in the white rot fungus Phanerochaete chrysosporium. H. Doddapaneni and J. S. Yadav Mol Genetics and Genomics, December 2005; 274(5): 454-466 Microarray and allele specific PCR detection of point mutations in Mycobacterium tuberculosis genes associated with drug resistance. Xing Tang, Sheldon L. Morris, John J. Langone and Larry E. Bockstahler Journal of Microbiological Methods, December 2005; 63(3): 318-330 The effect of replicate number and image analysis method on sweetpotato [Ipomoea batatas (L.) Lam.] cDNA microarray. C. E. McGregor, L. He, R. M. Ali, B. Sosinski, J. Jankowicz, K. Burg and D. R. Labonte Plant Molecular Biology Reporter, December 2005; 23(4): 367-381 Design, production, and utilization of long oligonucleotide microarrays for expression analysis in maize. J.M. Gardiner, C.R. Buell, R. Elumalai, D.W. Galbraith, D.A. Henderson, A.L. Iniguez, S.M. Kaeppler, J.J. Kim, J. Liu, A. Smith, L. Zheng, V.L. Chandler Maydica, 2005; 50:425-435 Methods for Genome-Wide Analysis of Gene Expression Changes in Polyploids. Jianlin Wang, Jinsuk J. Lee, Lu Tian, Hyeon-Se Lee, Meng Chen, Sheetal Rao, Edward N. Wei, R.W. Doerge, Luca Comai and Z.Jeffrey Chen Methods in Enzymology, Molecular Evolution: Producing the Biochemical Data, 2005; 395: 570-596 Controlled agitation during hybridization: surface acoustic waves are shaking up microarray technology. Achim Wixforth Methods Mol Medicine, Microarrays in Clinical Diagnostics, 2005; 114: 121-145. Identification of gene expression patterns for a molecular diagnosis of kidney tumors. Holger Sueltmann, Andreas Buness, Markus Ruschhaupt, Wolfgang Huber, Ruprecht Kuner, Bastian Gunawan, Laszlo Fuezesi, Annemarie Poustka In: DNA Microarrays, Ulrike Nuber Ed., Taylor and Francis, New York, 20 October 2005; p.39-50 2004. Expression of genes in the TGF-β signaling pathway is significantly deregulated in smooth muscle cells from aorta of aryl hydrocarbon receptor knockout mice. Junhai Guo, Maureen Sartor, Saikumar Karyala, Mario Medvedovic, Simone Kann, Alvaro Puga, Patrick Ryan and Craig R. Tomlinson Toxicology and Applied Pharmacology, 1 January 2004; 194(1): 79-89 Automated array-based genomic profiling in chronic lymphocytic leukemia: Development of a clinical tool and discovery of recurrent genomic alterations.
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Jonathan Z. Pan, Rebecka Jörnsten and Ronald P. Hart Physiol Genomics, 13 April 2004; 17(2): 201-214 Gene expression in human embryonic stem cell lines: unique molecular signature. Bhaskar Bhattacharya, Takumi Miura, Ralph Brandenberger, Josef Mejido, Yongquan Luo, Amy X. Yang, Bharat H. Joshi, Irene Ginis, R. Scott Thies, Michal Amit, Ian Lyons, Brian G. Condie, Joseph Itskovitz-Eldor, Mahendra S. Rao, and Raj K. Puri Blood, 15 April 2004; 103(8): 2956-2964 Assessment of reliability of microarray data and estimation of signal thresholds using mixture modeling. Musa H. Asyali, Mohamed M. Shoukri, Omer Demirkaya and Khalid S. A. Khabar Nucleic Acids Research, 27 April 2004; 32(8): 2323-2335. HybriChip: an antigen microarray based screening tool, designed for a high-throughput production platform of mouse derived monoclonal antibodies. Federico De Masi Ph.D. Thesis, University of Glasgow, April 2004; p. 1-157 Development of SNP microarray for supplementary paternity testing. P. Ellonen, M. Levander, I. Ulmanen and M. Lukka International Congress Series, April 2004; 1261: 12-14 Functional genomics of cell elongation in developing cotton fibers. A. Arpat, Mark Waugh, John P. Sullivan, Michael Gonzales, David Frisch, Dorrie Main, Todd Wood, Anna Leslie, Rod Wing and Thea Wilkins Plant Molecular Biology, April 2004; 54(6):911-929 The glycobiology of human malignant gliomas: A microarray analysis. Lori Crosson, Nigel Otto, Sarah Brennan, Verne Hulce, Roger Kroes and Joseph R. Moskal Proc Amer Assoc Cancer Research, April 2004; 45: Abstract #1159 Mycobacterium tuberculosis ECF sigma factor sigC is required for lethality in mice and for the conditional expression of a defined gene set. Ronggai Sun, Paul J. Converse, Chiew Ko, Sandeep Tyagi, Norman E. Morrison,William R. Bishai Molecular Microbiology, April 2004; 52(1): 25–38 http://onlinelibrary.wiley.com/doi/10.1111/j.1365-2958.2003.03958.x/full Statistical monitoring of weak spots for improvement of normalization and ratio estimates in microarrays Igor Dozmorov, Nicholas Knowlton, Yuhong Tang and Michael Centola BMC Bioinformatics, 5 May 2004; 5:53 Method of constructing polynucleotide microarray, apparatus for the construction and polynucleotide microarray. Inventor: Shinya Watanabe Patent Application Publication NO.: US 2004/0091867 Al, Pub. Date: 13 May 2004
Microarray analysis in clinical oncology: pre-clinical optimization using needle core biopsies from xenograft tumors. Elizabeth M Goley, Soni J Anderson, Cynthia Ménard, Eric Chuang, Xing Lü, Philip J Tofilon and Kevin Camphausen BMC Cancer, 19 May 2004; 4:20 The Acetyltransferase p300/CBP-Associated Factor is a p53 Target Gene in Breast Tumor cells. George S Watts, Marc M Oshiro, Damian J Junk, Ryan J Wozniak, Summer J Watterson, Frederick E Domann, and Bernard W Futscher Neoplasia, May 2004; 6(3): 187–194 Use of the DNA Flow-Thru Chip, a Three-Dimensional Biochip, for Typing and Subtyping of Influenza Viruses. Nicole Kessler, Olivier Ferraris, Kevin Palmer, Wayne Marsh, and Adam Steel Journal of Clinical Microbiology, May 2004; 42(5): 2173-2185 Identification of the CREB-binding Protein/p300-interacting Protein CITED2 as a Peroxisome Proliferator-activated Receptor α Coregulator. Eric S. Tien, John W. Davis and John P. Vanden Heuvel The Journal of Biological Chemistry, 4 June 2004; 279(23): 24053-24063. Human marrow stromal cells activate monocytes to secrete osteopontin, which down-regulates Notch1 gene expression in CD34+ cells Mineo Iwata, Norihiro Awaya, Lynn Graf, Christoph Kahl, and Beverly Torok-Storb Blood, 15 June 2004; 103(12): 4496-4502. An oligonucleotide microchip for genome-wide microRNA profiling in human and mouse tissues. Chang-Gong Liu, George Adrian Calin , Brian Meloon, Nir Gamliel, Cinzia Sevignani, Manuela Ferracin, Calin Dan Dumitru, Masayoshi Shimizu, Simona Zupo, Mariella Dono, Hansjuerg Alder, Florencia Bullrich, Massimo Negrini and Carlo M. Croce Proc Natl Acad Sci U S A, 29 June 2004; 101(26): 9740-9744. Are data from different gene expression microarray platforms comparable? Anna-Kaarina Järvinen, Sampsa Hautaniemi, Henrik Edgren, Petri Auvinen, Janna Saarela, Olli-P. Kallioniemi and Outi Monni Genomics, June 2004; 83(6): 1164-1168 hMiDas and hMitChip: New Opportunities in Mitochondrial Bioinformatics and Genomic Medicine. Salvatore Alesci, Yan A. Su, George P. Chrousos, 17th IEEE Symposium on Computer-Based Medical Systems (CBMS'04), June 2004; cbms, pp.329 Development of a new reference standard for microarray experiments. Francesco Gorreta, Dagania Barzaghi, Amy J. VanMeter, Vikas Chandhoke, and Luca Del Giacco BioTechniques, June 2004; 36:1002-1009 Construction and Analysis of a Subtracted Library and Microarray of cDNAs Expressed Specifically in Chicken Heart Progenitor Cells. Mozhgan Afrakhte and Thomas M. Schultheiss Developmental Dynamics, June 2004; 230(2): 290-298
Genomic DNA-Chip Hybridization Reveals a Higher Incidence of Genomic Amplifications in Pancreatic Cancer than Conventional Comparative Genomic Hybridization and Leads to the Identification of Novel Candidate Genes. Karlheinz Holzmann, Holger Kohlhammer, Carsten Schwaenen, Swen Wessendorf, Hans A. Kestler, Alexandra Schwoerer, Bettina Rau, Bernd Radlwimmer, Hartmut Döhner, Peter Lichter, Thomas Gress and Martin Bentz Cancer Research, 1 July 2004; 64(13): 4428-4433 Biologically meaningful expression profiling across species using heterologous hybridization to a cDNA microarray. Susan CP Renn, Nadia Aubin-Horth and Hans A Hofmann BMC Genomics, 6 July 2004; 5: 42 Fructose-responsive genes in the small intestine of neonatal rats. Xue-Lin Cui, Patricia Soteropoulos, Peter Tolias and Ronaldo P. Ferraris Physiol Genomics, 8 July 2004; 18(2): 206-217 Amplification of MGC2177, PLAG1, PSMC6P, and LYN in a malignant mixed tumor of salivary gland detected by cDNA microarray with tyramide signal amplification. Yvonne T. M. Tsang, Yi-Mieng Chang, Xinyan Lu, Pulivarthi H. Rao, Ching C. Lau and Kwong-Kwok Wong Cancer Genetics and Cytogenetics, 15 July 2004, 152(2): 124-128 Transcriptional Responses of Intestinal Epithelial Cells to Infection with Vibrio cholerae. Neil R. Stokes, Xin Zhou, Stephen J. Meltzer, and James B. Kaper Infection and Immunity, July 2004; 72(7): 4240-4248 Temporal- and dose-dependent hepatic gene expression changes in immature ovariectomized mice following exposure to ethynyl estradiol. D. R. Boverhof, K. C. Fertuck, L. D. Burgoon, J. E. Eckel, C. Gennings and T. R. Zacharewski Carcinogenesis, July 2004; 25(7): 1277-1291 Linking nutrition to genomics. Bauer M, Hamm A, Pankratz MJ. Biol Chemistry, July 2004; 385(7): 593-596 In Vivo Pharmacokinetics and Regulation of Gene Expression Profiles by Isothiocyanate Sulforaphane in the Rat. Rong Hu, Vidya Hebbar, Bok-Ryang Kim, Chi Chen, Bozena Winnik, Brian Buckley, Patricia Soteropoulos, Peter Tolias, Ronald P. Hart and A.-N. Tony Kong J Pharmacology & Experimental Therapy, July 2004; 310(1): 263-271 Development and Clinical Evaluation of a Highly Sensitive DNA Microarray for Detection and Genotyping of Human Papillomaviruses. Tae Jeong Oh, Chang Jin Kim, Suk Kyung Woo, Tae Seung Kim, Dong Jun Jeong, Myung Soon Kim, Sunwoo Lee, Hyun Sill Cho, and Sungwhan An Journal of Clinical Microbiology, July 2004; 42(7): 3272-3280. Molecular evidence for stem cell function of the slow-dividing fraction among human hematopoietic progenitor cells by genome-wide analysis.
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List of Companies and Products Related to DNA Microarrays and DNA Chips. Crit. Rev. Oral Biol. Medicine, January 2002; 13(1): 35-50 Inducible Expression of a Constitutively Active Mutant of Mitogen-activated Protein Kinase Kinase 7 Specifically Activates c-JUN NH2-terminal Protein Kinase, Alters Expression of at Least Nine Genes, and Inhibits Cell Proliferation Sabine Wolter, J. Frederic Mushinski, Ali M. Saboori, Klaus Resch and Michael Kracht The Journal of Biological Chemistry, 1 February 2002; 277(5): 3576-3584. A microarray approach for identifying mutated genes. Shakhira Zakhrabekova, C. Gamini Kannangara, Diter von Wettstein and Mats Hansson Plant Physiology and Biochemistry, March 2002; 40(3): 189-197 Monitoring large-scale changes in transcript abundance in drought- and salt-stressed barley. Z. Neslihan Ozturk, Valentina Talamé, Michael Deyholos, Christine B. Michalowski, David W. Galbraith, Nermin Gozukirmizi, Roberto Tuberosa and Hans J. Bohnert Plant Molecular Biology, March 2002; 48(5-6): 551-573 Method and Apparatus for Visualizing Complex Data Sets. Inventor: Seth Taylor Patent Application Publication: US 2002/0052882 Al, Pub. Date: 2 May 2002 The Cationic Porphyrin TMPyP4 Down-Regulates c-MYC and Human Telomerase Reverse Transcriptase Expression and Inhibits Tumor Growth in Vivo. Cory L. Grand, Haiyong Han, Rubén M. Muñoz, Steve Weitman, Daniel D. Von Hoff, Laurence H. Hurley and David J. Bearss Molecular Cancer Therapeutics, 1 June 2002; 1(8): 565-573 Artificial Neural Networks and Gene Filtering Distinguish Between Global Gene Expression Profiles of Barrett’s Esophagus and Esophageal Cancer. Yan Xu, Florin M. Selaru, Jing Yin, Tong Tong Zou, Valentina Shustova, Yuriko Mori, Fumiaki Sato, Thomas C. Liu, Andreea Olaru, Suna Wang, Martha C. Kimos, Kellie Perry, Kena Desai, Bruce D. Greenwald, Mark J. Krasna, David Shibata, John M. Abraham and Stephen J. Meltzer Cancer Research, 15 June 2002; 62(12): 3493-3497 Genome expression analysis of Anopheles gambiae: Responses to injury, bacterial challenge, and malaria infection. George Dimopoulos, George K. Christophides, Stephan Meister, Jörg Schultz, Kevin P. White, Carolina Barillas-Mury, and Fotis C. Kafatos Proc Natl Acad Sci U S A, 25 June 2002; 99(13): 8814-8819 DNA Microarray-Based Typing of an Atypical Monophasic Salmonella enterica Serovar. Javier Garaizar, Steffen Porwollik, Aurora Echeita, Aitor Rementeria, Silvia Herrera, Rita Mei-Yi Wong, Jonathan Frye, Miguel A. Usera, and Michael McClelland J Clinical Microbiology, June 2002; 40(6): 2074–2078 Alterations in TNF- and IL-related gene expression in space-flown WI38 human fibroblasts. Alexandre Semov, Nathalia Semova, Chantale Lacelle, Richard Marcotte, Emmanuel Petroulakis, Gregory Proestou, and Eugenia Wang
FASEB Journal, June 2002; 16(8): 899-901. Microarrayers on the Spot Deborah A Fitzgerald The Scientist, 8 July 2002; 16(14): 42 Calorie restriction extends Saccharomyces cerevisiae lifespan by increasing respiration. Su-Ju Lin, Matt Kaeberlein, Alex A. Andalis, Lori A. Sturtz, Pierre-Antoine Defossez, Valeria C. Culotta, Gerald R. Fink & Leonard Guarente Nature, 18 July 2002; 418(6895): 344-348. Application of cDNA microarrays to generate a molecular taxonomy capable of distinguishing between colon cancer and normal colon. Tong-Tong Zou, Florin M Selaru, Yan Xu, Valentina Shustova, Jing Yin, Yuriko Mori, David Shibata, Fumiaki Sato, Suma Wang, Andreea Olaru, Elena Deacu, Thomas C Liu, John M Abraham and Stephen J Meltze Oncogene, 18 July 2002; 21(31): 4855-4862. Generating Microarrays for Retinal Studies Using a High-throughput DNA Isolation System. Adrienne LaRue, Samuel Shao-Min Zhang, Colin Barnstable Focus (Invitrogen), July 2002; 24(1): 14-15 Ribozyme-targeting of a secreted FGF-binding protein (FGF-BP) inhibits proliferation of prostate cancer cells in vitro and in vivo. Achim Aigner, Heiner Renneberg, Jörg Bojunga, Jürgen Apel, Peter S Nelson and Frank Czubayko Oncogene, 22 August 2002; 21(37): 5733-5742. Global/temporal gene expression in diaphragm and hindlimb muscles of dystrophin-deficient (mdx) mice Karl Rouger, Martine Le Cunff, Marja Steenman, Marie-Claude Potier, Nathalie Gibelin, Claude A. Dechesne, and Jean J. Leger Am J Physiology- Cell Physiology, September 2002; 283(3): C773-C784 Artificial neural networks distinguish among subtypes of neoplastic colorectal lesions. Florin M. Selaru, Yan Xu, Jing Yin, Tong Zou, Thomas C. Liu, Yuriko Mori, John M. Abraham, Fumiaki Sato, Suna Wang, Charlie Twigg, Andreea Olaru, Valentina Shustova, Anatoly Leytin, Prodromos Hytiroglou, David Shibata, Noam Harpaz, Stephen J. Meltzer Gastroenterology, March 2002; 122(3): 606-613 Overexpression of White Collar-1 (WC-1) activates circadian clock-associated genes, but is not sufficient to induce most light-regulated gene expression in Neurospora crassa. Z. A. Lewis, A. Correa, C. Schwerdtfeger, K. L. Link, X. Xie, R. H. Gomer, T. Thomas, D. J. Ebbole and D. Bell-Pedersen Molecular Microbiology, August 2002; 45(4): 917–931, Microarray analysis identifies Salmonella genes belonging to the low-shear modeled microgravity regulon. James W. Wilson , Rajee Ramamurthy , Steffen Porwollik, Michael McClelland, Timothy Hammond, Pat Allen, C. Mark Ott, Duane L. Pierson, and Cheryl A. Nickerson Proc Natl Acad Sci U S A, 15 October 2002; 99(21): 13807-13812
DNA microarray analysis of cannabinoid signaling in mouse brain in vivo. Sophie Parmentier-Batteur, Kunlin Jin, Lin Xie, Xiao Ou Mao, and David A. Greenberg Mol Pharmacology, October 2002; 62(4): 828-835. Expression Profile Analysis of the Low-Oxygen Response in Arabidopsis Root Cultures. Erik Jan Klok, Iain W. Wilson, Dale Wilson, Scott C. Chapman, Rob M. Ewing, Shauna C. Somerville, W. James Peacock, Rudy Dolferus and Elizabeth S. Dennis The Plant Cell, October 2002; 14(10): 2481-2494 A dynamic approach to mapping coordinates between microplates and microarrays. Kei-Hoi Cheung, Janet Hager, Kenneth Nelson, Kevin White, Yuli Li, Michael Snyder, Kenneth Williams and Perry Miller Journal of Biomedical Informatics, October 2002; 35(5-6): 306-312 cDNA Microarray Analysis of Changes in Gene Expression Induced by Neuronal Hypoxia in Vitro. K. Jin, X. O. Mao, M. W. Eshoo, G. del Rio, R. Rao, D. Chen, R. P. Simon and D. A. Greenberg
Neurochemical Research, October 2002; 27(10): 1105-1112 Gene Expression after Treatment with Hydrogen Peroxide, Menadione, or t-Butyl Hydroperoxide in Breast Cancer Cells. Yao-Yu Eric Chuang, Yidong Chen, Gadisetti, V. R. Chandramouli, John A. Cook, Deborah Coffin, Mong-Hsun Tsai, William DeGraff, Hailing Yan, Shuping Zhao, Angelo Russo, Edison T. Liu and James B. Mitchell Cancer Research, 1 November 2002; 62(21): 6246-6254 METHOD AND SYSTEM FOR NUCLEIC ACID SEQUENCING. Inventor: Mark W. Perlin Patent Application Publication: US 2002/0172948 Al, Pub. Date: 21 November 2002 Malaria Genomics and Post-Genomics in Leiden Andy Waters, Taco Kooij, Marianna Karras, Shahid Khan http://www.lumc.nl/rep/1040/att/811071156182556/811130228382556/811130232202556/811181140472556/811180253302556.pdf 2001. (21) Microarrays for Gene Discovery and Metabolic Pathway Analysis in Plants. Michael Deyholos, Hong Wang and David Galbraith LifeScience(Sigma), January 2001; 2(1): 2-4 P135-T .Meeting the demands for high throughput custom microarray production with the GeneMachines® OmniGrid™. K.S. Small, D. Henninger, G. Barragan, J. Dabrowiak, J. Fayet-Faber; An International Symposium Sponsored by The Association of Biomolecular Resource Facilities: THE NEW BIOLOGY, Technologies for Resolving Macromolecular Communications; San Diego, California, February 24-27, 2001; Abstract. A genomics approach towards salt stress tolerance.
Hans J. Bohnerta, Patricia Ayoubid, Chris Borcherta, Ray A. Bressanc, Robert L. Burnapd, John C. Cushmane, Mary Ann Cushmane, Michael Deyholosb, Robert Fischera, David W. Galbraithb, Paul M. Hasegawac, Matt Jenksc, Shinji Kawasakia, Hisashi Koiwac, Shin Kore-edae, Byeong-Ha Leeb, Chris B. Michalowskia, Eduardo Misawad, Mika Nomurae, Neslihan Ozturka, Bradley Postierd, Rolf Praded, Chun-Peng Songb, Yuko Tanakab, Hong Wangb, Jian-Kang Zhub Plant Physiology and Biochemistry, March-April 2001; 39(3-4): 295-311 Gene Expression Profiles during the Initial Phase of Salt Stress in Rice. Shinji Kawasaki, Chris Borchert, Michael Deyholos, Hong Wang, Susan Brazille, Kiyoshi Kawai, David Galbraith, and Hans J. Bohnert The Plant Cell, April 2001; 13(4): 889–905 New products for molecular biology. Advertisement. Molecular Biotechnology, May 2001; 18(1): 81-87 Identification of hypoxia-responsive genes in a dopaminergic cell line by subtractive cDNA libraries and microarray analysis. D. Beitner-Johnson, K. Seta, Y. Yuan, H. -W. Kim, R. T. Rust, P. W. Conrad, S. Kobayashi and D. E. Millhorn Parkinsonism & Related Disorders, July 2001; 7(3): 273-281 DNA/DNA hybridization to microarrays reveals gene-specific differences between closely related microbial genomes. A. E. Murray,D. Lies, G. Li, K. Nealson, J. Zhou and James M. Tiedje Proc Natl Acad Sci U S A, 14 August 2001; 17 98(17): 9853-9858 New Molecular Approaches to Tissue Analysis. Ray B. Nagle Journal of Histochemistry and Cytochemistry, Auguat 2001; 49(8): 1063-1064 New products for molecular biology. Editors Molecular Biotechnology, September 2001; 19(1): 109-115 Widespread Collaboration of Isw2 and Sin3-Rpd3 Chromatin Remodeling Complexes in Transcriptional Repression. Thomas G. Fazzio, Charles Kooperberg, Jesse P. Goldmark, Cassandra Neal, Ryan Basom, Jeffrey Delrow, and Toshio Tsukiyama Molecular and Cellular Biology, October 2001; 21(19): 6450-6460 Molecular Signatures of Sepsis: Multiorgan Gene Expression Profiles of Systemic Inflammation Arul M. Chinnaiyan, Markus Huber-Lang, Chandan Kumar-Sinha, Terrence R. Barrette, Sunita Shankar-Sinha, Vidya J. Sarma, Vaishalee A. Padgaonkar and Peter A. Ward Am J Pathology, October 2001; 159(4): 1199-1209. Silencing of Wnt Signaling and Activation of Multiple Metabolic Pathways in Response to Thyroid Hormone-Stimulated Cell Proliferation. Lance D. Miller, Kyung Soo Park, Qingbin M. Guo, Nawal W. Alkharouf, Renae L. Malek, Norman H. Lee, Edison T. Liu, and Sheue-yann Cheng
Molecular and Cellular Biology, October 2001; 21(19): 6626-6639 The ΔuvrB mutations in the Ames strains of Salmonella span 15 to 119 genes. Steffen Porwollik, Rita Mei-Yi Wong, Simon H. Sims, Roel M. Schaaper, David M. DeMarini and Michael McClelland Mutation Research/Fundamental and Molecular Mechanisms of Mutagenesis, 1 November 2001; 483(1-2): 1-11 Hypoxia-induced Regulation of MAPK Phosphatase-1 as Identified by Subtractive Suppression Hybridization and cDNA Microarray Analysis. Karen A. Seta, Richard Kim, Hie-Won Kim, David E. Millhorn and Dana Beitner-Johnson The Journal of Biological Chemistry, 30 November 2001; 276(48): 44405-44412. cDNA microarray analysis of multidrug resistance: doxorubicin selection produces multiple defects in apoptosis signaling pathways. George S. Watts, Bernard W. Futscher, Robert Isett, Mary Gleason-Guzman, Mark W. Kunkel and Sydney E. Salmon J Pharmacology and Experimental Therapeutics, November 2001; 299(2): 434-441 Signal amplification by rolling circle amplification on DNA microarrays. Girish Nallur, Chenghua Luo, Linhua Fang, Stephanie Cooley, Varshal Dave, Jeremy Lambert, Kari Kukanskis, Stephen Kingsmore, Roger Lasken and Barry Schweitzer Nucleic Acids Research, 1 December 2001; 29(23): E118 Gene expression in the developing mouse retina by EST sequencing and microarray analysis. Xiuqian Mu, Sheng Zhao, Rashmi Pershad, Tzung-Fu Hsieh, Ann Scarpa, Steven W. Wang, R. Allen White, Phillip D. Beremand, Terry L. Thomas, Lin Gan and William H. Klein Nucleic Acids Research, 15 December 2001; 29(24): 4983-4993. Identification of a small molecule inhibitor of Sir2p. Antonio Bedalov, Tonibelle Gatbonton, William P. Irvine, Daniel E. Gottschling , Julian A. Simon Proc Natl Acad Sci U S A, 18 December 2001; 98(26): 15113-15118 DNA Microarray Analysis of the Hyperthermophilic Archaeon Pyrococcus furiosus: Evidence for a New Type of Sulfur-Reducing Enzyme Complex Gerrit J. Schut, Jizhong Zhou, and Michael W. W. Adams Journal of Bacteriology, December 2001; 183(24): 7027-7036. Global Transcriptional Response of Bacillus subtilis to Heat Shock. John D. Helmann, Ming Fang Winston Wu, Phil A. Kobel, Francisco-Javier Gamo, Michael Wilson, Maud M. Morshedi, Marc Navre, and Chris Paddon Journal of Bacteriology, December 2001; 183(24): 7318-7328 Printing DNA Microarrays Using the Biomek® 2000 Laboratory Automation Workstation. David W. Galbraith, Jiří Macas, Elizabeth A. Pierson, Wenying Xu and Marcela Nouzová Methods in Molecular Biology, DNA Arrays: Methods and Protocols, 2001; 170: 131-140 2000. (11)
Suite Dreams. Bob Sinclair The Scientist, 24 January 2000; 14(2): 22 cDNA microarray technology and its applications. Charlie C. Xiang and Yidong Chen Biotechnology Advances, March 2000; 18(1): 35-46 http://www.primate.or.kr/bioinformatics/biotutorial/dna/rna/microarray/array5.pdf High-fidelity mRNA amplification for gene profiling. Ena Wang, Lance D. Miller, Galen A. Ohnmacht, Edison T. Liu, and Francesco M. Marincola Nature Biotechnology, April 2000; 18(4): 457-459. New developments in the analysis of gene expression. Burgess, J.K.; Hazelton, R.H. Redox Report, April 2000; 5(2-3): 63-73 Array of Options: Instrumentation to exploit the DNA microarray explosion. Jorge D Cortese The Scientist, 29 May 2000; 14(11): 26 Automation for genomics, part two: sequencers, microarrays, and future trends. Deirdre Meldrum Genome Research, September 2000; 10(9):1288-303 Coordinated plant defense responses in Arabidopsis revealed by microarray analysis. Peer M. Schenk, Kemal Kazan, Iain Wilson, Jonathan P. Anderson, Todd Richmond, Shauna C. Somerville, and John M. Manners Proc Natl Acad Sci U S A, 10 October 2000; 97(21): 11655-11660 New products for molecular biology. Molecular Biotechnology, October 2000; 16(2): 177-186 Searching for gene-environment interactions in cancer: biorepository support for the New York Cancer Project. Peter K. Gregersen, and Robin A. Felder. Journal of the Association for Laboratory Automation, October 2000; 5(5): 37-39. http://jla.sagepub.com/content/5/5/37.full.pdf+html DNA Microarrays Speed the Gathering of Genetic Information. Jorge D. Cortese The Scientist-the Newspaper for the Science Professional, November 2000; 14(11): 26-30. Product Review: Spotting a microarray system. Elizabeth Zubritsky Analytical Chemistry, December 2000; 72(23): 761A-767A http://pubs.acs.org/doi/pdf/10.1021/ac002997u
1999. (1) Performance of the GeneMachines® OmniGridTM Microarrayer for Printing DNA Chips for Gene Expression Analysis. (Abstract #10. The San Diego Conference: Nucleic Acid Technologies in Disease Detection, November 17–19, 1999) Scott Hunicke-Smith, Jaques Fayet-Faber and Poonam S. Medberry Clinical Chemistry, November 1999, 45(11): 2047-2053. http://www.clinchem.org/content/45/11/2047.full
