Proteina intatta 1 2 3 4 Ala-Leu-Thr-Pro............ Endoproteinasi Arg-C 1 2 3 4 5 6 7 8 9 10 11 12...

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Transcript of Proteina intatta 1 2 3 4 Ala-Leu-Thr-Pro............ Endoproteinasi Arg-C 1 2 3 4 5 6 7 8 9 10 11 12...

Page 1: Proteina intatta 1 2 3 4 Ala-Leu-Thr-Pro............ Endoproteinasi Arg-C 1 2 3 4 5 6 7 8 9 10 11 12 a) Ile-Lys-Val-Trp-Glu-Gly-Thr-Gly-Leu-Val-Pro-Arg.
Page 2: Proteina intatta 1 2 3 4 Ala-Leu-Thr-Pro............ Endoproteinasi Arg-C 1 2 3 4 5 6 7 8 9 10 11 12 a) Ile-Lys-Val-Trp-Glu-Gly-Thr-Gly-Leu-Val-Pro-Arg.
Page 3: Proteina intatta 1 2 3 4 Ala-Leu-Thr-Pro............ Endoproteinasi Arg-C 1 2 3 4 5 6 7 8 9 10 11 12 a) Ile-Lys-Val-Trp-Glu-Gly-Thr-Gly-Leu-Val-Pro-Arg.

Proteina intatta 1 2 3 4 Ala-Leu-Thr-Pro ... ... ... ...

Endoproteinasi Arg-C

1 2 3 4 5 6 7 8 9 10 11 12a) Ile-Lys-Val-Trp-Glu-Gly-Thr-Gly-Leu-Val-Pro-Arg

1 2 3b) Ser-Thr-Val

1 2 3 4 5 6 7 8 9 10c) Ala-Leu-Thr-Pro-Val-Ser-Glu-Met-Val-Arg

Endoproteinasi Glu-C

1 2 3 4 5 6 7 8 9 10d) Gly-Thr-Gly-Leu-Val-Pro-Arg-Ser-Thr-Val

1 2 3 4 5 6 7e) Ala-Leu-Thr-Pro-Val-Ser-Glu

1 2 3 4 5 6 7 8f) Met-Val-Arg-Ile-Lys-Val-Trp-Glu

Allineamento per sovrapposizione zone comuni:

e) Ala-Leu-Thr-Pro-Val-Ser-Gluc) Ala-Leu-Thr-Pro-Val-Ser-Glu-Met-Val-Argf) Met-Val-Arg-Ile-Lys-Val-Trp-Glua) Ile-Lys-Val-Trp-Glu-Gly-Thr-Gly-Leu-Val-Pro-Argd) Gly-Thr-Gly-Leu-Val-Pro-Arg-Ser-Thr-Valb) Ser-Thr-Val

Sequenza: 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25Ala-Leu-Thr-Pro-Val-Ser-Glu-Met-Val-Arg-Ile-Lys-Val-Trp-Glu-Gly-Thr-Gly-Leu-Val-Pro-Arg-Ser-Thr-Val____________________________ ___________ ____________________ ___________________________ ___________

Page 4: Proteina intatta 1 2 3 4 Ala-Leu-Thr-Pro............ Endoproteinasi Arg-C 1 2 3 4 5 6 7 8 9 10 11 12 a) Ile-Lys-Val-Trp-Glu-Gly-Thr-Gly-Leu-Val-Pro-Arg.

Anno Quantita' Tempo

196O 10 g 3 anni

1970 1 g 1 anno

1980 1 mg 1 settimana

1990 0.05 mg 1 giorno

2000 0.02 mg 1 giorno

Quantita' e tempi richiesti negli anni per sequenziareun peptide di 50 residui amminoacidici

Page 5: Proteina intatta 1 2 3 4 Ala-Leu-Thr-Pro............ Endoproteinasi Arg-C 1 2 3 4 5 6 7 8 9 10 11 12 a) Ile-Lys-Val-Trp-Glu-Gly-Thr-Gly-Leu-Val-Pro-Arg.

-Sequenziatore automatico di peptidi Applied Biosystem Procise 492 che opera secondo il metodo di Edman della degradazione con fenilisotiocianato

Page 6: Proteina intatta 1 2 3 4 Ala-Leu-Thr-Pro............ Endoproteinasi Arg-C 1 2 3 4 5 6 7 8 9 10 11 12 a) Ile-Lys-Val-Trp-Glu-Gly-Thr-Gly-Leu-Val-Pro-Arg.

Schema di un sequenziatore di peptidi

Page 7: Proteina intatta 1 2 3 4 Ala-Leu-Thr-Pro............ Endoproteinasi Arg-C 1 2 3 4 5 6 7 8 9 10 11 12 a) Ile-Lys-Val-Trp-Glu-Gly-Thr-Gly-Leu-Val-Pro-Arg.
Page 8: Proteina intatta 1 2 3 4 Ala-Leu-Thr-Pro............ Endoproteinasi Arg-C 1 2 3 4 5 6 7 8 9 10 11 12 a) Ile-Lys-Val-Trp-Glu-Gly-Thr-Gly-Leu-Val-Pro-Arg.
Page 9: Proteina intatta 1 2 3 4 Ala-Leu-Thr-Pro............ Endoproteinasi Arg-C 1 2 3 4 5 6 7 8 9 10 11 12 a) Ile-Lys-Val-Trp-Glu-Gly-Thr-Gly-Leu-Val-Pro-Arg.
Page 10: Proteina intatta 1 2 3 4 Ala-Leu-Thr-Pro............ Endoproteinasi Arg-C 1 2 3 4 5 6 7 8 9 10 11 12 a) Ile-Lys-Val-Trp-Glu-Gly-Thr-Gly-Leu-Val-Pro-Arg.
Page 11: Proteina intatta 1 2 3 4 Ala-Leu-Thr-Pro............ Endoproteinasi Arg-C 1 2 3 4 5 6 7 8 9 10 11 12 a) Ile-Lys-Val-Trp-Glu-Gly-Thr-Gly-Leu-Val-Pro-Arg.
Page 12: Proteina intatta 1 2 3 4 Ala-Leu-Thr-Pro............ Endoproteinasi Arg-C 1 2 3 4 5 6 7 8 9 10 11 12 a) Ile-Lys-Val-Trp-Glu-Gly-Thr-Gly-Leu-Val-Pro-Arg.

Spettrometro di massa

Page 13: Proteina intatta 1 2 3 4 Ala-Leu-Thr-Pro............ Endoproteinasi Arg-C 1 2 3 4 5 6 7 8 9 10 11 12 a) Ile-Lys-Val-Trp-Glu-Gly-Thr-Gly-Leu-Val-Pro-Arg.

Standard PTH-a.acidi Degradazione di Edman

Page 14: Proteina intatta 1 2 3 4 Ala-Leu-Thr-Pro............ Endoproteinasi Arg-C 1 2 3 4 5 6 7 8 9 10 11 12 a) Ile-Lys-Val-Trp-Glu-Gly-Thr-Gly-Leu-Val-Pro-Arg.

Primo passo degradazione Edman Peptide singolo

Page 15: Proteina intatta 1 2 3 4 Ala-Leu-Thr-Pro............ Endoproteinasi Arg-C 1 2 3 4 5 6 7 8 9 10 11 12 a) Ile-Lys-Val-Trp-Glu-Gly-Thr-Gly-Leu-Val-Pro-Arg.

Secondo passo degradazione Edman Peptide singolo

Page 16: Proteina intatta 1 2 3 4 Ala-Leu-Thr-Pro............ Endoproteinasi Arg-C 1 2 3 4 5 6 7 8 9 10 11 12 a) Ile-Lys-Val-Trp-Glu-Gly-Thr-Gly-Leu-Val-Pro-Arg.

Degradazione di Edman su miscela di peptidi Tre passi

Page 17: Proteina intatta 1 2 3 4 Ala-Leu-Thr-Pro............ Endoproteinasi Arg-C 1 2 3 4 5 6 7 8 9 10 11 12 a) Ile-Lys-Val-Trp-Glu-Gly-Thr-Gly-Leu-Val-Pro-Arg.
Page 18: Proteina intatta 1 2 3 4 Ala-Leu-Thr-Pro............ Endoproteinasi Arg-C 1 2 3 4 5 6 7 8 9 10 11 12 a) Ile-Lys-Val-Trp-Glu-Gly-Thr-Gly-Leu-Val-Pro-Arg.
Page 19: Proteina intatta 1 2 3 4 Ala-Leu-Thr-Pro............ Endoproteinasi Arg-C 1 2 3 4 5 6 7 8 9 10 11 12 a) Ile-Lys-Val-Trp-Glu-Gly-Thr-Gly-Leu-Val-Pro-Arg.
Page 20: Proteina intatta 1 2 3 4 Ala-Leu-Thr-Pro............ Endoproteinasi Arg-C 1 2 3 4 5 6 7 8 9 10 11 12 a) Ile-Lys-Val-Trp-Glu-Gly-Thr-Gly-Leu-Val-Pro-Arg.
Page 21: Proteina intatta 1 2 3 4 Ala-Leu-Thr-Pro............ Endoproteinasi Arg-C 1 2 3 4 5 6 7 8 9 10 11 12 a) Ile-Lys-Val-Trp-Glu-Gly-Thr-Gly-Leu-Val-Pro-Arg.
Page 22: Proteina intatta 1 2 3 4 Ala-Leu-Thr-Pro............ Endoproteinasi Arg-C 1 2 3 4 5 6 7 8 9 10 11 12 a) Ile-Lys-Val-Trp-Glu-Gly-Thr-Gly-Leu-Val-Pro-Arg.
Page 23: Proteina intatta 1 2 3 4 Ala-Leu-Thr-Pro............ Endoproteinasi Arg-C 1 2 3 4 5 6 7 8 9 10 11 12 a) Ile-Lys-Val-Trp-Glu-Gly-Thr-Gly-Leu-Val-Pro-Arg.
Page 24: Proteina intatta 1 2 3 4 Ala-Leu-Thr-Pro............ Endoproteinasi Arg-C 1 2 3 4 5 6 7 8 9 10 11 12 a) Ile-Lys-Val-Trp-Glu-Gly-Thr-Gly-Leu-Val-Pro-Arg.
Page 25: Proteina intatta 1 2 3 4 Ala-Leu-Thr-Pro............ Endoproteinasi Arg-C 1 2 3 4 5 6 7 8 9 10 11 12 a) Ile-Lys-Val-Trp-Glu-Gly-Thr-Gly-Leu-Val-Pro-Arg.
Page 26: Proteina intatta 1 2 3 4 Ala-Leu-Thr-Pro............ Endoproteinasi Arg-C 1 2 3 4 5 6 7 8 9 10 11 12 a) Ile-Lys-Val-Trp-Glu-Gly-Thr-Gly-Leu-Val-Pro-Arg.
Page 27: Proteina intatta 1 2 3 4 Ala-Leu-Thr-Pro............ Endoproteinasi Arg-C 1 2 3 4 5 6 7 8 9 10 11 12 a) Ile-Lys-Val-Trp-Glu-Gly-Thr-Gly-Leu-Val-Pro-Arg.
Page 28: Proteina intatta 1 2 3 4 Ala-Leu-Thr-Pro............ Endoproteinasi Arg-C 1 2 3 4 5 6 7 8 9 10 11 12 a) Ile-Lys-Val-Trp-Glu-Gly-Thr-Gly-Leu-Val-Pro-Arg.
Page 29: Proteina intatta 1 2 3 4 Ala-Leu-Thr-Pro............ Endoproteinasi Arg-C 1 2 3 4 5 6 7 8 9 10 11 12 a) Ile-Lys-Val-Trp-Glu-Gly-Thr-Gly-Leu-Val-Pro-Arg.
Page 30: Proteina intatta 1 2 3 4 Ala-Leu-Thr-Pro............ Endoproteinasi Arg-C 1 2 3 4 5 6 7 8 9 10 11 12 a) Ile-Lys-Val-Trp-Glu-Gly-Thr-Gly-Leu-Val-Pro-Arg.
Page 31: Proteina intatta 1 2 3 4 Ala-Leu-Thr-Pro............ Endoproteinasi Arg-C 1 2 3 4 5 6 7 8 9 10 11 12 a) Ile-Lys-Val-Trp-Glu-Gly-Thr-Gly-Leu-Val-Pro-Arg.
Page 32: Proteina intatta 1 2 3 4 Ala-Leu-Thr-Pro............ Endoproteinasi Arg-C 1 2 3 4 5 6 7 8 9 10 11 12 a) Ile-Lys-Val-Trp-Glu-Gly-Thr-Gly-Leu-Val-Pro-Arg.
Page 33: Proteina intatta 1 2 3 4 Ala-Leu-Thr-Pro............ Endoproteinasi Arg-C 1 2 3 4 5 6 7 8 9 10 11 12 a) Ile-Lys-Val-Trp-Glu-Gly-Thr-Gly-Leu-Val-Pro-Arg.