Population biology of Verticilliumcesantabarbara.ucanr.edu/files/173672.pdf · V. dahliae races in...

29
Population biology of Verticillium Dylan Short UC Davis

Transcript of Population biology of Verticilliumcesantabarbara.ucanr.edu/files/173672.pdf · V. dahliae races in...

Page 1: Population biology of Verticilliumcesantabarbara.ucanr.edu/files/173672.pdf · V. dahliae races in lettuce in the Salinas Valley Race 2 Race 1 . Race Race 1 Race 2 0 5 10 15 20 25

Population biology of Verticillium

Dylan Short

UC Davis

Page 2: Population biology of Verticilliumcesantabarbara.ucanr.edu/files/173672.pdf · V. dahliae races in lettuce in the Salinas Valley Race 2 Race 1 . Race Race 1 Race 2 0 5 10 15 20 25

Outline

• Background: Biology of Verticillium

• Influence of infested spinach seed on lettuce

• Verticillium race characterizations

• Breeding for disease resistance

Page 3: Population biology of Verticilliumcesantabarbara.ucanr.edu/files/173672.pdf · V. dahliae races in lettuce in the Salinas Valley Race 2 Race 1 . Race Race 1 Race 2 0 5 10 15 20 25
Page 4: Population biology of Verticilliumcesantabarbara.ucanr.edu/files/173672.pdf · V. dahliae races in lettuce in the Salinas Valley Race 2 Race 1 . Race Race 1 Race 2 0 5 10 15 20 25
Page 5: Population biology of Verticilliumcesantabarbara.ucanr.edu/files/173672.pdf · V. dahliae races in lettuce in the Salinas Valley Race 2 Race 1 . Race Race 1 Race 2 0 5 10 15 20 25
Page 6: Population biology of Verticilliumcesantabarbara.ucanr.edu/files/173672.pdf · V. dahliae races in lettuce in the Salinas Valley Race 2 Race 1 . Race Race 1 Race 2 0 5 10 15 20 25

Verticillium dahliae

• Soilborne wilt pathogen

• Broad host range

• Forms melanized resting structures

• Colonizes seeds of infected plants

• Some host resistance exists

Page 7: Population biology of Verticilliumcesantabarbara.ucanr.edu/files/173672.pdf · V. dahliae races in lettuce in the Salinas Valley Race 2 Race 1 . Race Race 1 Race 2 0 5 10 15 20 25
Page 8: Population biology of Verticilliumcesantabarbara.ucanr.edu/files/173672.pdf · V. dahliae races in lettuce in the Salinas Valley Race 2 Race 1 . Race Race 1 Race 2 0 5 10 15 20 25

• Verticillium dahliae was recently described in commercial spinach seed lots from Washington in 2005

• Is it possible that V. dahliae may spread from infested spinach seed to lettuce production fields?

Influence of infested spinach on

lettuce

Page 9: Population biology of Verticilliumcesantabarbara.ucanr.edu/files/173672.pdf · V. dahliae races in lettuce in the Salinas Valley Race 2 Race 1 . Race Race 1 Race 2 0 5 10 15 20 25

• Planted three crops of spinach followed by two

crops of iceberg lettuce in square meter plots

• Used highly infested spinach seed mixed with

treated seed in various proportions

• Repeated this pattern several times

• Checked the lettuce plants for disease to see if

Verticillium dahliae was present

Influence of infested spinach on

lettuce

Page 10: Population biology of Verticilliumcesantabarbara.ucanr.edu/files/173672.pdf · V. dahliae races in lettuce in the Salinas Valley Race 2 Race 1 . Race Race 1 Race 2 0 5 10 15 20 25
Page 11: Population biology of Verticilliumcesantabarbara.ucanr.edu/files/173672.pdf · V. dahliae races in lettuce in the Salinas Valley Race 2 Race 1 . Race Race 1 Race 2 0 5 10 15 20 25
Page 12: Population biology of Verticilliumcesantabarbara.ucanr.edu/files/173672.pdf · V. dahliae races in lettuce in the Salinas Valley Race 2 Race 1 . Race Race 1 Race 2 0 5 10 15 20 25
Page 13: Population biology of Verticilliumcesantabarbara.ucanr.edu/files/173672.pdf · V. dahliae races in lettuce in the Salinas Valley Race 2 Race 1 . Race Race 1 Race 2 0 5 10 15 20 25
Page 14: Population biology of Verticilliumcesantabarbara.ucanr.edu/files/173672.pdf · V. dahliae races in lettuce in the Salinas Valley Race 2 Race 1 . Race Race 1 Race 2 0 5 10 15 20 25

Plating discolored roots on selective medium

Page 15: Population biology of Verticilliumcesantabarbara.ucanr.edu/files/173672.pdf · V. dahliae races in lettuce in the Salinas Valley Race 2 Race 1 . Race Race 1 Race 2 0 5 10 15 20 25

Influence of infested spinach on

lettuce

• Verticillium dahliae appears to be able to spread

from spinach seeds and plants into subsequent

crops of lettuce

Page 16: Population biology of Verticilliumcesantabarbara.ucanr.edu/files/173672.pdf · V. dahliae races in lettuce in the Salinas Valley Race 2 Race 1 . Race Race 1 Race 2 0 5 10 15 20 25

Resistance and races of V. dahliae

• Certain cultivars of a few crops are resistant to race 1

• Only partial resistance to race 2 exists in lettuce

Race 1

Race 2

Page 17: Population biology of Verticilliumcesantabarbara.ucanr.edu/files/173672.pdf · V. dahliae races in lettuce in the Salinas Valley Race 2 Race 1 . Race Race 1 Race 2 0 5 10 15 20 25

Race 1-specific PCR

Race 2-specific PCR

PCR tests that identify race

Page 18: Population biology of Verticilliumcesantabarbara.ucanr.edu/files/173672.pdf · V. dahliae races in lettuce in the Salinas Valley Race 2 Race 1 . Race Race 1 Race 2 0 5 10 15 20 25

Identifying races in field samples of V. dahliae

Page 19: Population biology of Verticilliumcesantabarbara.ucanr.edu/files/173672.pdf · V. dahliae races in lettuce in the Salinas Valley Race 2 Race 1 . Race Race 1 Race 2 0 5 10 15 20 25

V. dahliae races in lettuce in the Salinas Valley

Race 2

Race 1

Page 20: Population biology of Verticilliumcesantabarbara.ucanr.edu/files/173672.pdf · V. dahliae races in lettuce in the Salinas Valley Race 2 Race 1 . Race Race 1 Race 2 0 5 10 15 20 25

Race

Race 1

Race 2

0

5

10

15

20

25

30

35

40

Artichoke, CA, USA

0

5

10

15

20

25

30

35

Tomato, CA, USA

V. dahliae races in other crops

Page 21: Population biology of Verticilliumcesantabarbara.ucanr.edu/files/173672.pdf · V. dahliae races in lettuce in the Salinas Valley Race 2 Race 1 . Race Race 1 Race 2 0 5 10 15 20 25

Race

Race 1

Race 2

V. dahliae races in other crops

0

2

4

6

8

10

12

Pepper, CA, USA

0

2

4

6

8

10

12

14

16

18

20

Strawberry, CA, USA

Page 22: Population biology of Verticilliumcesantabarbara.ucanr.edu/files/173672.pdf · V. dahliae races in lettuce in the Salinas Valley Race 2 Race 1 . Race Race 1 Race 2 0 5 10 15 20 25

0

2

4

6

8

10

12

14

16

18

Mint, WA, USA

Race

Race 1

Race 2

V. dahliae races in other crops

0

2

4

6

8

10

12

14

Potato, WA, USA

Page 23: Population biology of Verticilliumcesantabarbara.ucanr.edu/files/173672.pdf · V. dahliae races in lettuce in the Salinas Valley Race 2 Race 1 . Race Race 1 Race 2 0 5 10 15 20 25

Race

Race 1

Race 2

V. dahliae races in other crops

0

20

40

60

80

100

120

140

160

180

200

Spinach, CHL Spinach, DNK Spinach, NLD Spinach, WA,USA

Page 24: Population biology of Verticilliumcesantabarbara.ucanr.edu/files/173672.pdf · V. dahliae races in lettuce in the Salinas Valley Race 2 Race 1 . Race Race 1 Race 2 0 5 10 15 20 25

Breeding for resistance to V.

dahliae race 2 in lettuce

Germán Sandoya

Page 25: Population biology of Verticilliumcesantabarbara.ucanr.edu/files/173672.pdf · V. dahliae races in lettuce in the Salinas Valley Race 2 Race 1 . Race Race 1 Race 2 0 5 10 15 20 25

Sources of resistance

• There is no complete resistance to race 2 of V. dahliae

• Four Plant Introductions from germplasm bank USDA-Pullman were identified as partial resistant (significantly less disease than susceptible cultivar Salinas)

Page 26: Population biology of Verticilliumcesantabarbara.ucanr.edu/files/173672.pdf · V. dahliae races in lettuce in the Salinas Valley Race 2 Race 1 . Race Race 1 Race 2 0 5 10 15 20 25

Genetics of the resistance trait

• Breed the four partially resistant lines to each other, and to the susceptible variety Salinas

• Study the effects of Verticillium inoculations under greenhouse and field conditions

• If segregation is found, families will be genotyped to search for QTLs (Quantitative Trait Loci)

Page 27: Population biology of Verticilliumcesantabarbara.ucanr.edu/files/173672.pdf · V. dahliae races in lettuce in the Salinas Valley Race 2 Race 1 . Race Race 1 Race 2 0 5 10 15 20 25
Page 28: Population biology of Verticilliumcesantabarbara.ucanr.edu/files/173672.pdf · V. dahliae races in lettuce in the Salinas Valley Race 2 Race 1 . Race Race 1 Race 2 0 5 10 15 20 25
Page 29: Population biology of Verticilliumcesantabarbara.ucanr.edu/files/173672.pdf · V. dahliae races in lettuce in the Salinas Valley Race 2 Race 1 . Race Race 1 Race 2 0 5 10 15 20 25

Summary

• There is evidence that V. dahliae can

spread from infested spinach seed to

subsequent lettuce crops

• race 1 and race 2 are found on spinach

seed and in lettuce, though race 1 is

currently the only race in Salinas

• Resistance to race 1 is basically

complete, race 2 resistance breeding is

on-going