“PAYAO”Web 2.0 Community Tagging System

to SBML models

2007 Sept

“PAYAO”

• an artificial floating raft where fish congregate

SBML Models Tagging System

*CellDesigner files

PAYAOSBML Models Tagging System

Manage Models,

Users,Groups

SBML files

Register a model

Store models, Tags, Comments

Login Users

VisitorsModel OwnerAdd Comments

Add/Edit Tags

to the model

View Models withCellDesigner notation

Group A

Group B

Model Manager•Register Models•Search Models•Tag references•Popular Keywords

SBML Models Tagging System

Login

User Manager•Add/Delete/Edit User

Group Manager•Create/Delete a group•Add/Delete/Edit User in a group

Model View・View the model・Tag the model

TOP

Model Manage

Model View

Model View with Tag Marks

Tag

Zoom

Model Info

Add Tag to a Specified Area

Tag to a Specified Area

Edit Tag to a Specified Area

View a Tag

Add Comments to a Tag

View Comments to a Tag

Switch On Notes Tags Again

Guest View

Model View

Register a Model

• Set the user privilege– sharable– taggable

• You can update the model while retaining the tags.

Add/Edit a Tag

• PubMed ID• Keyword• OutLink• Free text• Tag set to register• Line size• Color• Date to register• Comments1.Click this pencil shape icon

2.Specify the target

3. Specify the contents of the tag

To Edit a Tag:1. Click on the tag to edit2. Edit the contents

To Add a Tag:

PubMed ID Link