P. Grutter Making Contact to Molecules: Interfacing to the Nanoworld Peter Grutter Physics...

41
P. Grutter Making Contact to Molecules: Interfacing to the Nanoworld Peter Grutter Physics Department McGill University NSERC, FCAR, CIAR, McGill, IBM, CIHR, GenomeQuebec, CFI, NanoQuebec

description

P. Grutter What is Electronics? By electronics we mean the handling of complicated electrical wave forms for communicating information, probing (such as in radar) and data processing. Data processing is the result of one complex stream of information interacting with another. This requires non-linear behavior, otherwise information just gets passed on from one place to the other. (Landauer, Science 1968)

Transcript of P. Grutter Making Contact to Molecules: Interfacing to the Nanoworld Peter Grutter Physics...

Page 1: P. Grutter Making Contact to Molecules: Interfacing to the Nanoworld Peter Grutter Physics Department McGill University NSERC, FCAR, CIAR, McGill, IBM,

P. Grutter

Making Contact to Molecules: Interfacing to the Nanoworld

Peter GrutterPhysics DepartmentMcGill University

NSERC, FCAR, CIAR, McGill, IBM, CIHR, GenomeQuebec, CFI, NanoQuebec

Page 2: P. Grutter Making Contact to Molecules: Interfacing to the Nanoworld Peter Grutter Physics Department McGill University NSERC, FCAR, CIAR, McGill, IBM,

P. Grutter

What is Nanoelectronics?

Page 3: P. Grutter Making Contact to Molecules: Interfacing to the Nanoworld Peter Grutter Physics Department McGill University NSERC, FCAR, CIAR, McGill, IBM,

P. Grutter

What is Electronics?• By electronics we mean the handling of complicated

electrical wave forms for communicating information, probing (such as in radar) and data processing.

• Data processing is the result of one complex stream of information interacting with another.

• This requires non-linear behavior, otherwise information just gets passed on from one place to the other. (Landauer, Science 1968)

Page 4: P. Grutter Making Contact to Molecules: Interfacing to the Nanoworld Peter Grutter Physics Department McGill University NSERC, FCAR, CIAR, McGill, IBM,

P. Grutter

Page 5: P. Grutter Making Contact to Molecules: Interfacing to the Nanoworld Peter Grutter Physics Department McGill University NSERC, FCAR, CIAR, McGill, IBM,

P. Grutter

Page 6: P. Grutter Making Contact to Molecules: Interfacing to the Nanoworld Peter Grutter Physics Department McGill University NSERC, FCAR, CIAR, McGill, IBM,

P. Grutter

Molecular electronics: the issues

• Contacts• Structure-function

relationship between transport process and molecular structure

• Dissipation

• Crosstalk (interconnects)

• Architecture • I-O with a trillion

processors• Fault tolerance• Manufacturing costs

Page 7: P. Grutter Making Contact to Molecules: Interfacing to the Nanoworld Peter Grutter Physics Department McGill University NSERC, FCAR, CIAR, McGill, IBM,

P. Grutter

Does atomic structure of the contact matter?

YES !

Page 8: P. Grutter Making Contact to Molecules: Interfacing to the Nanoworld Peter Grutter Physics Department McGill University NSERC, FCAR, CIAR, McGill, IBM,

P. Grutter

Does atomic structure of the contact matter?

Mehrez, Wlasenko, et al., Phys. Rev. B 65, 195419 (2002)

Page 9: P. Grutter Making Contact to Molecules: Interfacing to the Nanoworld Peter Grutter Physics Department McGill University NSERC, FCAR, CIAR, McGill, IBM,

P. Grutter

Comparison of Experimental and Modeling Results

Mehrez, Wlasenko, et al., Phys. Rev. B 65, 195419 (2002)

Page 10: P. Grutter Making Contact to Molecules: Interfacing to the Nanoworld Peter Grutter Physics Department McGill University NSERC, FCAR, CIAR, McGill, IBM,

P. Grutter

‘Traditional’: infinite, structureless leads -> periodic boundary conditions.

but: - result depends on lead size!- bias not possible due to periodic boundary condition!

Calculating Conductance

Jellium lead Jellium leadmolecule

Page 11: P. Grutter Making Contact to Molecules: Interfacing to the Nanoworld Peter Grutter Physics Department McGill University NSERC, FCAR, CIAR, McGill, IBM,

P. Grutter

Calculation of electrical transport

)],(),([),(2)( 00 eVEfEfVETdEheVI RRLL

O f t e n o n e a s s u m e s t h a t T i s n o t a f u n c t i o n o f V , i . e . :

)(),( ETVET

a n d s t i c k s a l l t h e V d e p e n d e n c e i n t o t h e F e r m if u n c t i o n f

Page 12: P. Grutter Making Contact to Molecules: Interfacing to the Nanoworld Peter Grutter Physics Department McGill University NSERC, FCAR, CIAR, McGill, IBM,

P. Grutter

ab-initio modelling of electronic transport

lead

Page 13: P. Grutter Making Contact to Molecules: Interfacing to the Nanoworld Peter Grutter Physics Department McGill University NSERC, FCAR, CIAR, McGill, IBM,

P. Grutter

DFT plus non-equilibrium Green’s Functions

J. Taylor, H. Guo , J. Wang, PRB 63, R121104 (2001)

1. Calculate long, perfect lead.Apply external potential V by shifting energy levels -> create electrode data base and get potential right

lead

Page 14: P. Grutter Making Contact to Molecules: Interfacing to the Nanoworld Peter Grutter Physics Department McGill University NSERC, FCAR, CIAR, McGill, IBM,

P. Grutter

2. Solve Poisson equation for middle part (device plus a bit of leads); match wavefunctions and potential as a function of V to leads (use data base) in real space.

3. calculated with non-equilibrium Green’s functions (necessary as this is an open system). This automatically takes care of bound states

Page 15: P. Grutter Making Contact to Molecules: Interfacing to the Nanoworld Peter Grutter Physics Department McGill University NSERC, FCAR, CIAR, McGill, IBM,

P. Grutter

Molecular electronics: the issues

• Contacts• Structure-function

relationship between transport process and molecular structure

• Dissipation

• Crosstalk (interconnects)

• Architecture • I-O with a trillion

processors• Fault tolerance• Manufacturing costs

Page 16: P. Grutter Making Contact to Molecules: Interfacing to the Nanoworld Peter Grutter Physics Department McGill University NSERC, FCAR, CIAR, McGill, IBM,

P. Grutter

Reliable, chemically well defined contacts

Cui et al. Nanotechnology 13, 5 (2002), Science 294, 571 (2001)

Page 17: P. Grutter Making Contact to Molecules: Interfacing to the Nanoworld Peter Grutter Physics Department McGill University NSERC, FCAR, CIAR, McGill, IBM,

P. Grutter

Page 18: P. Grutter Making Contact to Molecules: Interfacing to the Nanoworld Peter Grutter Physics Department McGill University NSERC, FCAR, CIAR, McGill, IBM,

P. Grutter

Low-T UHV STM/AFM/FIM

140K, 10-11mbar

quick change between FIM - AFM/STM mode

Stalder, Ph.D. Thesis 1995 Cross et al. PRL 80, 4685 (1998) Schirmeisen et al. NJP 2, 29.1

(2000)

Page 19: P. Grutter Making Contact to Molecules: Interfacing to the Nanoworld Peter Grutter Physics Department McGill University NSERC, FCAR, CIAR, McGill, IBM,

P. Grutter

Field Ion Microscopy

(FIM)

E. Muller, 1950’s

Page 20: P. Grutter Making Contact to Molecules: Interfacing to the Nanoworld Peter Grutter Physics Department McGill University NSERC, FCAR, CIAR, McGill, IBM,

P. Grutter

Page 21: P. Grutter Making Contact to Molecules: Interfacing to the Nanoworld Peter Grutter Physics Department McGill University NSERC, FCAR, CIAR, McGill, IBM,

P. Grutter

FIM of W(111) tip

Imaging at 5.0 kV

Page 22: P. Grutter Making Contact to Molecules: Interfacing to the Nanoworld Peter Grutter Physics Department McGill University NSERC, FCAR, CIAR, McGill, IBM,

P. Grutter

FIM of W(111) tip

Imaging at 5.0 kV Manipulating at 6.0 kV

Page 23: P. Grutter Making Contact to Molecules: Interfacing to the Nanoworld Peter Grutter Physics Department McGill University NSERC, FCAR, CIAR, McGill, IBM,

P. Grutter

FIM of W(111) tip

Imaging at 5.0 kV Manipulating at 6.0 kV

Page 24: P. Grutter Making Contact to Molecules: Interfacing to the Nanoworld Peter Grutter Physics Department McGill University NSERC, FCAR, CIAR, McGill, IBM,

P. Grutter

FIM of W(111) tip

Imaging at 5.0 kV Manipulating at 6.0 kV

Page 25: P. Grutter Making Contact to Molecules: Interfacing to the Nanoworld Peter Grutter Physics Department McGill University NSERC, FCAR, CIAR, McGill, IBM,

P. Grutter

Single Au atom on W(111) tip

Imaged at 2.1 KV

Page 26: P. Grutter Making Contact to Molecules: Interfacing to the Nanoworld Peter Grutter Physics Department McGill University NSERC, FCAR, CIAR, McGill, IBM,

P. Grutter

W(111) tip on Au(111)

Cross et al. PRL 80, 4685 (1998)Schirmeisen et al, NJP 2, 29.1 (2000)

Page 27: P. Grutter Making Contact to Molecules: Interfacing to the Nanoworld Peter Grutter Physics Department McGill University NSERC, FCAR, CIAR, McGill, IBM,

P. Grutter

Molecular Dynamics Simulations

U. Landman et al, Science 248, 454 (1990)

Page 28: P. Grutter Making Contact to Molecules: Interfacing to the Nanoworld Peter Grutter Physics Department McGill University NSERC, FCAR, CIAR, McGill, IBM,

P. Grutter

W(111) trimer tip on Au(111)

Ead = 21 eV

= 0.2 nm

Page 29: P. Grutter Making Contact to Molecules: Interfacing to the Nanoworld Peter Grutter Physics Department McGill University NSERC, FCAR, CIAR, McGill, IBM,

P. Grutter

Tip relaxation effects

Hofer, Fisher, Wolkow and Grutter Phys. Rev. Lett. 87, 236104 (2001)

W tip on Au(111) surface

Page 30: P. Grutter Making Contact to Molecules: Interfacing to the Nanoworld Peter Grutter Physics Department McGill University NSERC, FCAR, CIAR, McGill, IBM,

P. Grutter

Tip relaxation effects

Hofer, Fisher, Wolkow and Grutter Phys. Rev. Lett. 87, 236104 (2001)

W tip on Au(111) surface

Page 31: P. Grutter Making Contact to Molecules: Interfacing to the Nanoworld Peter Grutter Physics Department McGill University NSERC, FCAR, CIAR, McGill, IBM,

P. Grutter

F(z) and I(z) of W(111) trimer on Au(111)

Schirmeisen et al, NJP 2, 29.1 (2000)

Page 32: P. Grutter Making Contact to Molecules: Interfacing to the Nanoworld Peter Grutter Physics Department McGill University NSERC, FCAR, CIAR, McGill, IBM,

P. Grutter

Yan Sun,

Anne-Sophie Lucier

Henrik Mortensen

Page 33: P. Grutter Making Contact to Molecules: Interfacing to the Nanoworld Peter Grutter Physics Department McGill University NSERC, FCAR, CIAR, McGill, IBM,

P. Grutter

The samples (measurements in progress)

A) Au(111) 170 nm×170 nm,B) mixture of C6 and C8 thiol

(ratio 6:1) on Au(111) 450nm×450nm

C) C8 thiol, 6nm×6nm D) C8/C8 dithiol 36nm×36 nm.

Page 34: P. Grutter Making Contact to Molecules: Interfacing to the Nanoworld Peter Grutter Physics Department McGill University NSERC, FCAR, CIAR, McGill, IBM,

P. Grutter

Stimulation of Single Ligand-Gated Ion Channels

Natural Process:Synaptic Transmission

Goal: To study channel gating kinetics and binding forces, while maintaining precise control of agonist location.

Experiment: Ligand-functionalized AFM tip

Page 35: P. Grutter Making Contact to Molecules: Interfacing to the Nanoworld Peter Grutter Physics Department McGill University NSERC, FCAR, CIAR, McGill, IBM,

P. Grutter

N. Cameron, B. Lennox (McGill)

Tethering Scheme:GABA v.s. GABOB

• Is it possible to tether a molecule of GABA without destroying its functionality?

Page 36: P. Grutter Making Contact to Molecules: Interfacing to the Nanoworld Peter Grutter Physics Department McGill University NSERC, FCAR, CIAR, McGill, IBM,

P. Grutter

Tethering Scheme: Polymer Linker

Au -S-(CH2)12-(O-CH2-CH2)23-O-GABOB {alkanethiol} {PEO}

Colloid simulates the AFM tip

Keeps the colloid complex soluble (?)

Page 37: P. Grutter Making Contact to Molecules: Interfacing to the Nanoworld Peter Grutter Physics Department McGill University NSERC, FCAR, CIAR, McGill, IBM,

P. Grutter

Planar Patch-Clamp Chips• Advanced microstructuring techniques are used to produce apertures in planar glass or quartz substrates.• Low noise recordings have been realized from both artificial lipid bilayers and whole cells.

Fertig et. al. Phys Rev E Stat Phys Plasmas Fluids Relat Interdiscip Topics 2001 Oct;64(4-1):040901.

Page 38: P. Grutter Making Contact to Molecules: Interfacing to the Nanoworld Peter Grutter Physics Department McGill University NSERC, FCAR, CIAR, McGill, IBM,

P. Grutter

Loading Rate Dependent Unbinding:

Most probable unbinding force:

• Ligand-receptor dissociation forces and rates depend on the rate at which the bond is ruptured!!!• Distinct binding states can be identified from a force v.s. loading rate plot.

Good review: Evans, E. Annu. Rev. Biophys. Biomol. Struct. 2001. 30:105-28.

Page 39: P. Grutter Making Contact to Molecules: Interfacing to the Nanoworld Peter Grutter Physics Department McGill University NSERC, FCAR, CIAR, McGill, IBM,

P. Grutter

F(z) as a function of

pulling speed

Clausen-Schaumann et al., Current Opinions in Chem. Biol. 4, 524 (2000)Merkel et al., Nature 397, (1999)

Allows the determination ofenergy barriers and thus is a direct measure of the energy landscape in conformational space.

Evans, Annu. Rev. Biophys. Biomol. Struct., 30, 105 (2001)

Page 40: P. Grutter Making Contact to Molecules: Interfacing to the Nanoworld Peter Grutter Physics Department McGill University NSERC, FCAR, CIAR, McGill, IBM,

P. Grutter

Summary

• Tools, both experimental and theoretical, drive our capabilities to understand the nanoworld!

• We develop and apply SPM techniques to interface to:

molecules and neuronsin order to understand

structure - property relationships

Page 41: P. Grutter Making Contact to Molecules: Interfacing to the Nanoworld Peter Grutter Physics Department McGill University NSERC, FCAR, CIAR, McGill, IBM,

P. Grutter

Supported by NSERC, FCAR, CIAR, NanoQuebecCFI, IBM, GenomeQuebec, CIHR McGill Dawson Scholarship

14 graduate students, 6 post doctoral fellows