Osgeo.wageningen kickoff event nov2012
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Transcript of Osgeo.wageningen kickoff event nov2012
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OSGEO.Wageningen
Pitch Slides - first OSGEO.Wageningen meeting - nov 2013
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Slides of 5 minute pitches by
GeoCatProigia
Isric (3*)Alterra
JustObjects
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GeoCat BV
Paul van Genuchten
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Overview
• Small Software development firm from Bennekom (employees in Nice, Valencia, Seville)
• Founder/Main Contributer GeoNetwork-OpenSource.org
• Related SDI-services
• GeoCat bridge
• OpenGeoSuite
• OpenLayers/GeoExt development
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• Metadata catalog
• Search Interface (CSW)
• Pluggable national profiles/schemes
• Edit interface (workflow/versioning)
• Harvesting (CSW,OWS,ArcSDE,Filesystem)
Geonetwork-opensource.org
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GeoCat Bridge
Desktop ArcInfo/ArcView
GeoServer or MapServer
GeoNetwork
OWSContext / OpenLayers
PostGis
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Bolsena Code Sprint
• Each summer hacking event in Bolsena (near Rome)
• (european) Communities meet up:
• Geonetwork • deegree • Grass• Mapbender • Mapproxy• Flamingo
• Open Source Spatial developers welcome to join
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Dolf Andringa
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Wat
•Management informatie voor huisartsen
•Begonnen in 2005 met pilot webgis
•Sinds 2011 GIS weer belangrijk
•Proigia GIS
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Proigia GIS
Proigia GIS
DataData
DataProvider
DataProvider
UserUserClick
“maps”
Redirect to webgis
Send data
Proigia GIS
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Technieken
•OpenLayers
•Postgis
•Geoserver
•GeoExt
•Pylons (Mapfish)
•Apache, Linux
Open data
• Open Streetmap• CBS• BAG
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Mister Jesus Versus OSGeo(personal story)
Jorge Samuel Mendes de Jesus
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~$>whoami
34 years old Caucasian male, Portuguese
Ph.D. Obtained in Ben-Gurion University. IsraelBasic studies in Geostatistcs, Agriculture and Remote sensing
Licenciatura (Master) in Agricultural Engineering. Uni do Algarve “Trust me I'm an Engineer ...the irrigation system will work”
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~$> ls -l -t -r
1st Job: INTAMAP project, doing web services (JRC-Ispra)
2nd Job: EuroGEOSS project, more web services and spatial database with biodiversity (JRC-Ispra)
3rd Job: Plymouth Marine Laboratory, even more web services and openLayers !!!! Long live pyWPS !!!!
3rd Job: Plymouth Marine Laboratory, even more web services and openLayers !!!! Long live pyWPS !!!! Lets deal with WSDL
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~$> man pywps & man taverna
PyWPS –> Python implementation of WPS 1.0.0 (Web Processing Service)http://pywps.wald.intevation.org/http://wiki.rsg.pml.ac.uk/pywps/Main_Page
Personal objectives: better interoperability between WPS and WSDL
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~$> man pywps & man taverna
http://www.taverna.org.uk/
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~$> man pywps & man taverna
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~$> at now
http://www.isric.org
WOSIS DB – 36481 soil profile records
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~$> at now + 365 days
Extended WOSIS functionality, public access data
Web Services Wrappers for Database
Support for platforms/websites (world soild profiles)
Support for geonetworks
More and better data and of course lots of spatial queries
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Use of OSGeo Software to address functionalities for ISRIC World Soil Information
HI Reuter
Material from: T Hengl G Heuvelink NH Batjes J Leenaars P Tempel P Bindraban
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myself
• Geo-ecology in Potsdam (DE)• University of Guelph (CA)• PhD in Precision Ag @ ZALF Müncheberg (DE)• Joint Research Center (IT) (ESBN)
• ISRIC World Soil Information (NL)
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Food security
Climate change
Biofuels
Water scarcity
Meat production
Land valuation
….
Policy domain
DATA ENTRY by• ISRIC Personnel• WWW• In Field
Quality A & C (WPS)
Harmonization (WPS)
Methods and infrastructure
ISRIC enterprise database
GlobalSoilMap.net properties
Avail. Water Content
SOC
P (?)
(…)
Web Processing Services
Fertilization strategy
Water mngt
C sequestration
Soil productivity
Soil degradation
Soil data & information
User interaction and agenda setting
Linking ISRIC soil information to policy
SC:Reuter&Bindraban, 2011
www.isric.org
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Global Soil Information Facilities
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ISRIC – Data Discovery What kind of data holds ISRIC ? e.g. Scanned Maps, GIS datasets & Reports
OGC conforming MetaDataService http://meta.isric.org
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Geoserver/Mapserver
ISRIC – Data VisualizationHow to visualize Data ? Goggle Earth / GIS / WEB 2.0
OGC conforming WMS/WFS
OpenLayers (WWW)
QGIS/ArcGIS
Google Earth
SC:Hannes I.Reuter, 2011
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Web service for point data entry
The web service for soil profile data entry is a facility for the collection of soil profile information. Users can enter individual profile observations as well as large datasets consisting of hundreds or thousands of profiles.
http://worldsoilprofiles.org/
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Overview
http://worldsoilprofiles.org/
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ISRIC – Data Processing What kind of soil/ soil property do we find at any location in the world?
http://wps.isric.eu/pywps/pywps.cgi?service=wps&version=1.0.0&request=Execute&identifier=sampler_hir&datainputs=InGMLdata=http://isric.eu/wps/testdata/random_points.gml;inRastername=http://isric.eu/testdata/elev_srtm_30m.tif;pause=0&
OGC conforming web processing serviceSC:Hannes I.Reuter, 2011
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Soil mapsSoil maps Soil samplesSoil samples
Reports, literatureReports, literature Soil data and informationSoil data and information
Slide Credit: A.Hartemink
Think globally – Act locally
We can do this – through collaboration and sharing of information
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Database storage and control
• Database developed and externally reviewed
• Binary Schema, Data Transformation and Standardisation Schema, UUID-generation introduced, tested in production
• AfSPD loaded, AfSIS sentinel sites next
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Facilitating Soil Map Production - DSM any arbitrary soil map production process - which uses auxiliary information
SC:Reuter, Lennars, Inakwu 2011
www.globalsoilmap.net
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Functionality to access
• querying for a single value from a defined covariate map (sample)
– http://wps.worldgrids.org/pywps.cgi?service=wps&version=1.0.0&request=execute&identifier=sampler_local1pt_nogml&datainputs=[x=11.3;y=12.1;inRastername=biocl15]
• querying for millions of values from a defined covariate map
• extraction of a defined subset from a defined covariate map (subset)
– http://wps.worldgrids.org/pywps.cgi?service=wps&version=1.0.0&request=execute&identifier=subset&datainputs=[bbox=25,25,40,40;inRastername=biocl15]&responsedocument=OutData=@asreference=true
• creating of an overlay of a user specified zone grid and a defined covariate map (zonalstats).
– http://wps.worldgrids.org/pywps.cgi?service=wps&version=1.0.0&request=execute&identifier=overlay&datainputs=[inRastername=globedem;inZone=http://ftp.isric.org/short/ztest.tif;stype=sd]&responsedocument=OutData=@asreference=true
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Alterra CGI
Bas Vanmeulebrouk
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ETS Manager
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Geoportaal Bibliotheek Wageningen UR
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Taming Rich GMLwith sETL
Just van den Broecke5 minute presentation at OSGeo.nl Stammtisch Wageningen
November 7, 2012
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We have a Problem
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The Rich GML Problem
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Rich GML = Complex Mess
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INSPIREBAGBGT
Top10NL.
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The The Streetname!Streetname!
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Complex Model
Transformations
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Millionsof
Objects
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10s of Millionsof
<Elements>
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MultipleTransformation
Steps
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Solution is Spatial ETL
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A.K.A.
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Thank You for your
Attention!
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But.......FOSS (s)ETL...?
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FOSS ETL - High Level
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FOSS ETL - Lower Level
But Each Powerful by Itself
ogr2ogr
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FOSS ETL - DYI ? (No!)
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FOSS ETL - How to Combine?
=+ + ?ogr2ogr
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FOSS ETL - Add Python to Equation
=+ + ?( )ogr2ogr
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=+ +
sETL
( )ogr2ogr
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sETL=
SimpleStreaming
SpatialSpeedy
ETL
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Process Chain
InpuInputt
FilterFilter OutpOutpututgmlgml
FilterFilter
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Speed: Streaming
InputInput FilterFilter OutpuOutputt
gmlgml
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Speed: Going Native
InputInput FilterFilter OutpuOutputt
gmlgml
ogr2ogr sETsETLL
sETLsETL
Native C Native C Libs/ProgsLibs/Progs
Calls
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Example: GML to PostGIS
ReadeReaderr
XMLXMLSplitteSplitte
rr
ogr2oogr2ogrgr
gmlgml
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Example: INSPIRE Model Transform
ogr2oogr2ogrgr XSLTXSLT WriterWriter
gmlgml
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Example: deegree Store
ogr2oogr2ogrgr XSLTXSLT
deegrdeegreeWrieeWri
terter
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Process Chain - How?
InputInput FiltersFilters OutpuOutputt
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Example: XML to Shape
The Source
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Example: XML to Shape
First: XSLT Transform to GML
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Example: XML to Shape
XMLXMLInputInput XSLTXSLT ogr2oogr2o
grgr
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Example: XML to Shape
The SETL Chain Config File
ProcessProcessChainChain
ReadeReaderr
XSLTXSLT
ogr2oogr2ogrgr
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Thank you for visiting
OSGEO.WageningenIsric, Alterra, Wageningen University, Proigia,
Nieuwland, Gima, GeoSpace, JustObjects, OpenGeoGroep, GeoCat, Water Insight, Geodan
Dealing with
Geonetwork, Geoserver, OpenLayers, pyWPS, GeoExt, PostGis, R, sETL, OGR, deegree,
Mapfish, Taverna
CU Next time