Oral Fluid Testing: Field Applications and Work In Progress

54
Oral fluid testing: Field applications and work in progress J Zimmerman, J Prickett. Iowa State University

description

Oral Fluid Testing: Field Applications and Work In Progress - Dr. Jeff Zimmerman, D.V.M., Ph.D. and John Prickett Iowa State University, at the Boehringer Ingelheim Vetmedica, Inc. Swine Health Seminar, August 15, 2009, Carolina Beach, North Carolina, USA.

Transcript of Oral Fluid Testing: Field Applications and Work In Progress

Page 1: Oral Fluid Testing: Field Applications and Work In Progress

Oral fluid testing:Field applications and work in progress

J Zimmerman, J Prickett.Iowa State University

Page 2: Oral Fluid Testing: Field Applications and Work In Progress

Big Picture

Page 3: Oral Fluid Testing: Field Applications and Work In Progress

Morrison et al. 2008.Regional control ofPRRS in Minnesota

Page 4: Oral Fluid Testing: Field Applications and Work In Progress

Morrison et al. 2008.Regional control ofPRRS in Minnesota

= field data

Page 5: Oral Fluid Testing: Field Applications and Work In Progress

Morrison et al. 2008.Regional control ofPRRS in Minnesota

= field data

… and productionmanagement

Page 6: Oral Fluid Testing: Field Applications and Work In Progress

Example 1. PredictoutbreaksGiven the same virus,increasing population sizeresults in …

1. Endemicity (no herd immunity)2. Continual cases w/ periodicoutbreaks3. Shorter inter-epidemic intervals4. Larger outbreaks at moreregular intervalsHaggett. 2000. GeographicalStructure of Epidemics

Page 7: Oral Fluid Testing: Field Applications and Work In Progress

Age- and source-matchednegative controls. Highlyuniform body size

PRRSV = non-uniform size

Example 2. Predict performance

Page 8: Oral Fluid Testing: Field Applications and Work In Progress

0

50

100

150

200

250

300

350

400

450

Day

42

Day

56

Day

70

Day

84

Day

98

Day

112

Day

119

Day

133

Day

147

Day

161

Day

175

Day

189

Days post-infection

Po

un

ds positive

negative

Difference

Example 2. Predict performance

PRRSV unevenand 2 weeks late

Page 9: Oral Fluid Testing: Field Applications and Work In Progress

Morrison et al. 2008.Regional control ofPRRS in Minnesota

= field data

… and productionmanagement

Page 10: Oral Fluid Testing: Field Applications and Work In Progress

• Wean-finish mortality 0.2% per year 1996-2005• Global trend. Not linked w/ PCV2.• Concurrent increase in health costs

Mortality RatesInching Upward. Nov15, 2006

Is the current infrastructure working?

Page 11: Oral Fluid Testing: Field Applications and Work In Progress

• We are big and complex …

Is the current infrastructure working?

Wayne Spencer. Networkanalysis of the role of pigmovements in area spreadof PRRSV. 2007 Internat’lPRRS Symposium

Morrison et al. 2008.Regional control of PRRS inMinnesota

Page 12: Oral Fluid Testing: Field Applications and Work In Progress

Is the current infrastructure working?

Images from WHO/CDS/2005.28

Page 13: Oral Fluid Testing: Field Applications and Work In Progress

Morrison et al. 2008.Regional control ofPRRS in Minnesota

= field data

… and productionmanagement

= YES!!

Page 14: Oral Fluid Testing: Field Applications and Work In Progress

Morrison et al. 2008.Regional control ofPRRS in Minnesota

= field data

… and productionmanagement

= producer driven, cheap, efficient

Page 15: Oral Fluid Testing: Field Applications and Work In Progress

Morrison et al. 2008.Regional control ofPRRS in Minnesota

= field data

… and productionmanagement

= it is up to us

Page 16: Oral Fluid Testing: Field Applications and Work In Progress

How different would thingshave been IF we had ourown spokesman and ourown data on 2009H1N1?

– Dollar-wise?– Public relations-wise?

The real storyon 2009 H1N1

Page 17: Oral Fluid Testing: Field Applications and Work In Progress

To control disease, optimize productivity,and protect our industry, we need cheap,plentiful, current data on infectious agents

Big Picture Conclusions

Page 18: Oral Fluid Testing: Field Applications and Work In Progress

Oral fluid testing:Field applications - human

Page 19: Oral Fluid Testing: Field Applications and Work In Progress

• 1988. Rational programme for screening travelersfor antibodies to hepatitis A. Lancet 1(8600):1447.

• 1992. Comparison of saliva and serum for HIVsurveillance in developing countries. Lancet 340: 1496

• 1994. HIV surveillance by testing saliva frominjecting drug users: a national study in NewZealand. J Epidemiol Community Health 48:55

• 1994. The use of oral fluid for hepatitis C antibodyscreening. Am J Gastroenterol 89:2025.

Field applications

Page 20: Oral Fluid Testing: Field Applications and Work In Progress

• 1997. Surveillance of measles in England andWales: implications of a national saliva testingprogram. Bull World Health Organ 75:515

• 2001. Has oral fluid the potential to replace serumfor the evaluation of population immunity levels? Astudy of measles, rubella, and hepatitis B in ruralEthiopia. Bull World Health Organ 79:588.

Field applications

Page 21: Oral Fluid Testing: Field Applications and Work In Progress

• 2004. A population-based seroprevalence study ofhepatitis A virus using oral fluid in England and Wales.Am J Epidemiol 159:786. Mail-in population survey.5,500 samples collected.

• 2007. Participant-collected, mail-delivered oral fluidspecimens can replace traditional serosurvey: ademonstration-of-feasibility survey of hepatitis A virus-specific antibodies in adults. Can J Public Health 98:37

• 2009. Feasibility of collecting oral fluid samples in thehome to determine seroprevalence of infections. EpidemiolInfect 137:211. Mailed in samples received from 11,698children.

Field applications

Page 22: Oral Fluid Testing: Field Applications and Work In Progress

• 2005 - 10 NY STD clinics implement oral fluidtesting = 40% increase in number tested

• Specificity 99.8%• Sensitivity ~99%• March 2005 – May 2008

– 166,058 oral fluid HIV tests– 442 (0.27%) false positive rate

2009. Ann Emerg Med 53:151

Field applications

OraQuick® Advance Rapid HIV-1/2 Antibody Test

Page 23: Oral Fluid Testing: Field Applications and Work In Progress

Summary and conclusions• Lots of research on oral fluid diagnostics in humans

beginning as early as 1909• Focus primarily on antibody detection• Widely used in surveillance

– Especially HIV– Large mail-in surveys. Self-collected samples

sent via mail = lots of cheap data• Tests need to be optimized to the specimen

– Some tests better than others

Page 24: Oral Fluid Testing: Field Applications and Work In Progress

Oral fluid testing:Field applications – wean-to-finish pigs

Page 25: Oral Fluid Testing: Field Applications and Work In Progress

Summary of PCR field data10 sites x 6 pens per site (n = 600)

1100 head wean-finish barns

Page 26: Oral Fluid Testing: Field Applications and Work In Progress

Our experience in the field … - Samples collected by site personnel - 10 sites x 6 pens x 10 samples per site = 600 samples - Supplies stored on-site

Rope, coolers, felt-tipped pens, addresslabels, etc. - “How to Collect” poster displayed at each site - Just one set of samples from one barn arrived late

OF sampling in 1,100head wean-finishbarns

Page 27: Oral Fluid Testing: Field Applications and Work In Progress

Summary of field data: 10 sites x 6 pens per site

Page 28: Oral Fluid Testing: Field Applications and Work In Progress

Sites show different patterns of infection

Summary of field data: 10 sites x 6 pens per site

Page 29: Oral Fluid Testing: Field Applications and Work In Progress

10 wean-finish sites monitored using oral fluids

Page 30: Oral Fluid Testing: Field Applications and Work In Progress

10 wean-finish sites monitored using oral fluids

Page 31: Oral Fluid Testing: Field Applications and Work In Progress

10 wean-finish sites monitored using oral fluids

Page 32: Oral Fluid Testing: Field Applications and Work In Progress

10 wean-finish sites monitored using oral fluids

Page 33: Oral Fluid Testing: Field Applications and Work In Progress

10 wean-finish sites monitored using oral fluids

Page 34: Oral Fluid Testing: Field Applications and Work In Progress

10 wean-finish sites monitored using oral fluids

Page 35: Oral Fluid Testing: Field Applications and Work In Progress

10 wean-finish sites monitored using oral fluids

Page 36: Oral Fluid Testing: Field Applications and Work In Progress

10 wean-finish sites monitored using oral fluids

Page 37: Oral Fluid Testing: Field Applications and Work In Progress

10 wean-finish sites monitored using oral fluids

Page 38: Oral Fluid Testing: Field Applications and Work In Progress

10 wean-finish sites monitored using oral fluids

Page 39: Oral Fluid Testing: Field Applications and Work In Progress

10 wean-finish sites monitored using oral fluids

Torque teno virus PCR testing [work in progress]

Among 600 oral fluid samples, - 25 of 121 (21%) PCR-positive for TTV-1 - 97 of 121 (80%) PCR-positive for TTV-2 - 23 of 25 TTV-1 samples also positive for TTV-2

Page 40: Oral Fluid Testing: Field Applications and Work In Progress

10 wean-finish sites monitored using oral fluids

FACT:Impossible to reproduce this study or theseinteractions under experimental conditions

Page 41: Oral Fluid Testing: Field Applications and Work In Progress

10 wean-finish sites monitored using oral fluids

Observations …. This stuff is not in the books- Pigs arrive at 3 weeks of age shedding PCV2, PRRSV, SIV

Page 42: Oral Fluid Testing: Field Applications and Work In Progress

10 wean-finish sites monitored using oral fluids

Observations …. This stuff is not in the books- Pigs arrive at 3 weeks of age shedding PCV2, PRRSV, SIV- Sites are in the same system, but very different patterns

• Duration of PCV2, PRRSV, and SIV shedding highlyvariable • Repeat episodes of virus circulation(PRRSV and/or SIV)

• Prolonged PCV2 circulation post-vaccination

Page 43: Oral Fluid Testing: Field Applications and Work In Progress

10 wean-finish sites monitored using oral fluids

Observations …. This stuff is not in the books- Pigs arrive at 3 weeks of age shedding PCV2, PRRSV, SIV- Sites are in the same system, but very different patterns

• Duration of PCV2, PRRSV, and SIV shedding highlyvariable • Repeat episodes of virus circulation(PRRSV and/or SIV)

• Prolonged PCV2 circulation post-vaccination- Some PCV2 vaccination protocols work better than others!

Page 44: Oral Fluid Testing: Field Applications and Work In Progress

10 wean-finish sites monitored using oral fluids

Observations …. This stuff is not in the books- Pigs arrive at 3 weeks of age shedding PCV2, PRRSV, SIV- Sites are in the same system, but very different patterns

• Duration of PCV2, PRRSV, and SIV shedding highlyvariable • Repeat episodes of virus circulation(PRRSV and/or SIV)

• Prolonged PCV2 circulation post-vaccination- Some PCV2 vaccination protocols work better than others!- Economic / productivity effects? [work in progress]

Page 45: Oral Fluid Testing: Field Applications and Work In Progress

10 wean-finish sites monitored using oral fluids

Applications?- Monitor negative status populations (esp boar studs, sow herds)- Evaluate vaccine protocols and vaccine efficacy- Monitor vaccine compliance- Monitor controlled exposure- Monitor antibiotic withdrawal [idea in progress]- Predict disease losses- Predict growth rates and uniformity- Plan, time, and test interventions

Page 46: Oral Fluid Testing: Field Applications and Work In Progress

Sample number and frequency?

Page 47: Oral Fluid Testing: Field Applications and Work In Progress

Sample number and frequency?

Page 48: Oral Fluid Testing: Field Applications and Work In Progress

What’s in the pipeline?

Page 49: Oral Fluid Testing: Field Applications and Work In Progress

Research in progress

• Antibody test development for oral fluids– KSU (PCV2)– ISU (PCV2, PRRSV, SIV, M hyo)– SDSU (PRRSV)

• PCR optimization (ISU)• Oral fluid sampling

from sows andboars (PIC, UM, ISU)

Page 50: Oral Fluid Testing: Field Applications and Work In Progress

Research in progress

• Sample collection from boars expands thepossible applications to studs and sowherds– Most boars are cooperators– Sample recovery is easy– And more welfare-friendly than bleeding

Page 51: Oral Fluid Testing: Field Applications and Work In Progress

Summary

Page 52: Oral Fluid Testing: Field Applications and Work In Progress

Quick,easy,cheapto collect►

▼ PCR detection of SIV, PCV2, PRRSV. Others?

▼ PRRSV and PCV2 ELISA antibody assays.Others in progress ..

Prickett et al., 2008. Detection of PRRSV infection in porcine oral fluid samples. J Vet Diagn Invest 20:156-163. Prickett et al., 2008. Oral-fluid samples for surveillance of commercial growing pigs for PRRSV and PCV2 infections. JSHAP 16(2):86-91.Hoffman P, Prickett J, et al., 2008. Implementation and validation of swine oral fluid collection in a commercial system. 38th Annual Meeting of the AASV. San Diego, California, pp. 301-302.

Surveillance of commercial swine units using oral fluid samples

Page 53: Oral Fluid Testing: Field Applications and Work In Progress

ORAL FLUID

• Lower cost than serum• Lower tech than serum• Lower sample numbers

than serum• Some tests available

and additional testsshould be able in 2010(research in progress)

• Barn/site level testing(not pig level) - willrequire a paradigm shift

• PCRs are too expensive• Antibody tests need to

be optimized• Much data missing• New and scary

CONSPROS

Page 54: Oral Fluid Testing: Field Applications and Work In Progress

Acknowledgements and Thanks

• John Prickett, ApisitKittawornratt, Jeremy Johnson,Trevor Schwartz, Dan

• Drs. Rodger Main, JohnJohnson, SheelaRamamoorthy, Erin Strait, K-JYoon, Wayne Chittick, KentSchwartz, Chong Wang - IowaState University

• Drs. Bob Morrison, MikeMurtaugh - University ofMinnesota

• Dr. Ramon Molina - ITSON,Sonora Mexico

• Dr. Mark Engle - PIC

• Pat Hoffmann, Ann and ErnieKurtz - Murphy-Brown LLCWestern Operations

• Drs. Michael Roof & ReidPhilips - Boehringer IngelhemVetmedica, Inc.

• Drs. Steve Sornsen & RonWhite - Pfizer, Inc.

• Dr. Bob Rowland - KansasState University

• USDA PRRS CAP