Workshop: computational gene prediction in DNA sequences (intro)
National Workshop On COMPUTATIONAL SCIENCEpeople.du.ac.in/~mrana/conference/csw/report.pdf ·...
Transcript of National Workshop On COMPUTATIONAL SCIENCEpeople.du.ac.in/~mrana/conference/csw/report.pdf ·...
National Workshop
On
COMPUTATIONAL SCIENCE
1-7TH JULY 2010
Venue for technical session Venue for experiments session
DS Kothari Lecture Hall
Dept. of Physics & Astrophysics North Campus, University of Delhi,
DELHI 110007
Lab-1,2,3
Delhi Univ. Computer Center North Campus, University of Delhi,
DELHI 110007
Organized by:
Swami Shraddhanand College,
University of Delhi,
Alipur, Delhi 110036
Sponsoring Agencies
DST UGC DBT CSIR Ministry of IT&C DRDO INSA
Workshop Report
The workshop on computational science was first of its kind to be held at the
University of Delhi. The workshop was devoted to exposing recent advances in
the application of computational techniques in various fields of science and
technology. A large number of participants from various organisations attended
the workshop; the total number was 136 excluding the students (9) and staff (13)
of Swami Shraddhanand College. The participation was only by prior registration
and was not restricted to those who have experience and interest on
Computational Science. The break-up of the participants is as follows:
Under-graduate Student - 50
Graduate Student -
Research Scholar / RA –
Faculty / Scientist –
A detailed list of participants is given in the Appendix I.
The workshop was inaugurated by the Prof. A.K. Bhakshi, Director, ILLL,
University of Delhi, Prof. A.G. Vedeshwar, Head, Department of Physics &
Astrophysics, University of Delhi, Prof. Ajay Gupta, Director, DUCC,
University of Delhi, Sh. Vijender Mann, Chairman, GB, SSNC, University of
Delhi chaired the inaugural function.
It was held with full seven days of technical talks, oral presentations, laboratory
sessions based on the presentations. Based on the theme of the workshop, the
organizers were able to bring the scientists and students working in different fields
on the same platform. Attendance at the workshop was enormous. The workshop
focused on several specific themes:
Computational Mathematics
Application of Information Technology in Indian Agriculture System
Bioinformatics
Application of Numerical techniques in weather prediction.
Solution of Diffusion Equations
GNU plot, LYX & Scilab
Simulation
Modeling
Python
Various computer software applications
In addition to technical sessions mentioned above, there were two special sessions
in the workshop, first was the inaugural session, where a key note address was
presented on the theme of the workshop by Dr. D. Preeven , Scientist, Ministry of
Earth Science, and second one was the valedictory session, where the participants
openly put their remarks about the outcome of the workshop. Each session ended
with a discussion on various aspects of that route. The presentations made in the
workshop have been posted in the following website:
http://people.du.ac.in/~mrana
and can be accessed from there.
The detailed schedule of the workshop is enclosed in Appendix II.
Large attendance in the workshop led to some changes in the mechanics. The
technical sessions were held at the famous DS KOTHARI Memorial hall (known
as L-2) of the Department of Physics and astrophysics, University of Delhi, and the
practical sessions were held at the Delhi University Computer Center. At the Delhi
University Computer Center the participants were asked to solve the assignments
given to them during the talks on Various Software e.g. GNU plot, Knopix, SPSS,
Data modeling , Oracle etc. It is worth mentioning that the participants were
served lunch at the Delhi University Guest House, which is merely a ten minutes
walk from the Physics Department and the Department of Physics.
This Workshop was sponsored by many agencies: CSIR, DBT, DST, DRDO,
INSA, Ministry of IT & C, and the UGC. The organizers and participants of the
workshop warmly thank these agencies for their support for the workshop.
APPENDIX - I
Participants List
S.No. Name Organization / University Position
1
Anil Kumar Singh Ewing College (Allahabad) (UP)
[email protected],94153094
Faculty
( Reader )
2
Sandeep Kumar NCHGSR(Punjab)
[email protected], 9417621059
M.Sc.- 1st yr.
3
Rohit kumar Yadav Bundelkhand Univ. (UP)
B.Tech.-II
4
Akanksha Sharma(F) Bundelkhand Univ. (UP) B.tech
5
Asmita Jestin(F) Bundelkhand Univ. (UP) B.tech
6
Rishi Kant Kumar Bundelkhand Univ. (UP) B.tech-II
7
Prashant Kumar Bundelkhand Univ. (UP)
Bio-Tech-II
8
Shawan Ali Bundelkhand Univ. (UP)
BCA-III Sem
9
Jeeshan Sheikh Bundelkhand Univ. (UP) BCA-III Sem
10
Mohd. Ahmad Bundelkhand Univ. (UP) B.Tech
11
Shraddha Kumari (W) Bundelkhand Univ. (UP) MCA-Final
12 Mamta Taneja (W)
IGNOU New Delhi BCA
13
Harpreet Kaur (W) Longowal (Punjab) R.S.
14 Chanchal (W) Longowal (Punjab) R.S.
15 Mrigendra Pratap
Singh
Bundelkhand Univ. (UP) BCA
16 Bhaghyesh Mangalore Univ. R.S.
17 Lavneet Singh RBS College, Agra MCA
18 Ruby Bansal (W) Keshav Mahavidhayala, University of Delhi B.Sc.-II
19 Vaibhav Jaiswal Keshav Mahavidhayala, University of Delhi B.Sc.-II
20 Aslam Ansari Bundelkhand Univ. , Jhansi (UP) B.Tech-II Sem
21 Rabia Basri Aziz (W) KMC, University of Delhi B.Sc.(LS) -II
22 Vikas Gupta Bundelkhand Univ. , Jhansi (UP) BCA – II sem
23 Hrishabh Mittal Bundelkhand Univ. , Jhansi (UP) B.Sc.-II
24 Anshul Gangil (W) Bundelkhand Univ. , Jhansi (UP) B.sc. -III
25 Mohd. Danish Bundelkhand Univ. , Jhansi (UP) B.Tech
26 Abhishek Samadhiya Bundelkhand Univ. , Jhansi (UP) B.Sc.-III
27 Sanjeev Kumar Sahu Dept. of Environment, University of Delhi M.Sc. (Env)
28 Vikash Sharma ANDC, University of Delhi B.Sc.(P)- II
29 Monika Gupta(W) Keshav Mahavidhayala, University of Delhi B.Sc.(P) –II
30 Shubam Gautam Hansraj College, University of Delhi B.Sc. (CS)
31 Dr. Kalawti Saini (W) Mirinda House, University of Delhi Faculty(Chem)
32 Shagun Suhail (W) BCAS, University of Delhi B.Sc. (CS) -3
33 Dr. Mujeeb Ur Rahman VPCI, University of Delhi Faculty
34 S.K. Dhaka Rajdhani College, University of Delhi Faculty
35 Manpreet Kaur Physics & Astrophysics, Univ. of Delhi R.S.
36 Rupali Spara Physics & Astrophysics, Univ. of Delhi R.S.
37 Rangoli Bhatnagar Physics & Astrophysics, Univ. of Delhi R.S.
38 Varun Malik Physics & Astrophysics, Univ. of Delhi Faculty
39 Vinay Kumar Physics & Astrophysics, Univ. of Delhi R.S.
40 Vivek Panwar Physics & Astrophysics, Univ. of Delhi R.S.
41 Anju Gupta Shivaji College, University of Delhi Faculty
42 Vanita Rose(F) C.R. College (Rohtak),MDU B.Ed.
43 Vikash Ruhil SBMN Eng. College B.Tech-1
44 Disha Das (W) IP Univ. B.Tech.-2
45 Gurmeet Singh (W) Sharda University, Nodia M.Tech.
46 Mahendra Mehra Motilal Vigyan Univ. Bhopal (MP) Faculty
47 Mohd azim aziz KMC, University of Delhi B.Sc.-2
48 Nidhi Chawla (W) Punjab University, Chandigarh M.Sc.(Bio-inf)
49 Tanveer Ahmed Wani Physics, Motilal Vigyan Univ. Bhopal, MP R.S.
50 Kanchan soni (W) CS- Bundelkhand University (UP) B.Tech.-3 sem
51 Mohd. Imran kozgar AMU, Aligarh R.S.
52 Suman Kumar LPU, Jhalandhar B.Tech-2
53 Swapil Paliwal IISER Kolkata Int M.S.
54 Dr. Manisha Agarwal IMS Gaziabad (UP) Faculty
55 Swati Prashar (W) Punjab University, Chandigarh M.Sc. (B.I)
56 Preyaa Atri(F) Bundelkhand Univ. (UP) B.Tech.
57 Mona Singhal (F) Keshav Mahavidhayala, University of Delhi B.Sc.-2
58 Sakshi Grover(W) Keshav Mahavidhayala, University of Delhi B.Sc.-2
59 Ashish Bansal Keshav Mahavidhayala, University of Delhi B.Sc.-2
60 Manisha madaan(W) Keshav Mahavidhayala, University of Delhi B.Sc.-2
61 Shiven kaushal BCAS, University of Delhi B.Sc.-2
62 Ms. Alka Jindal(W) Univ. of Rajasthan R.S
63 T. N. Soorya Physics, Vardhaman College Bijnor Faculty
64 Shikha Punia(w) St. Stephan College, University of Delhi B.Sc.-2
65 Aniruddha Ghosh TERI Univ. R.A.
66 Sudarshan Gupta MCASC, Pune, Maharasthra M.sc.
67 Aniruddha Pawar (W) MCASC, Pune, Maharasthra M.sc.
68 Monika Mukul (W) Physics, Punjab University, Chandigarh M.sc.
69 Seepika Soin (W) Physics, Punjab University, Chandigarh B.Sc.
70 Neha Sharma (W) Physics, Punjab University, Chandigarh B.Sc.
71 Khusnud Shahidi IISER-Kolkata M.S.
72 Mohd. Firoz Khan JNU, Delhi R.S
73 Akanksha Tyagi (W) Hindu College, University of Delhi B.Sc.
74 Sunil Anand NIT, Jharkhand MCA-2
75 Dr. Deepa Chauhan(W) AIT, Kanpur Faculty
76 Sumedha Jain (W) Hindu College, University of Delhi B.Sc.
77 Kamaldeep Kaur(M) IP University, Delhi R.S.
78 Vandana Bageshwar Ramjas College, University of Delhi B.Sc.-1
79 Anjali Surehatia(W) SES, University of Delhi M.A.
80 Aakanksha Tyagi SES, University of Delhi M.Sc.
81 Garima Saxena (W) Physics & Astrophysics, University of Delhi R.S.
82 D. Anandhi (W) Mathematics, IILM (Noida) Faculty
83 Ruchi Gupta (W) ITM Universe, Gwalier (UP) Faculty
84 Md. Mahfoozul Haque JMI ( Delhi) R.S.
85 Md. Imran JMI ( Delhi) R.S.
86 Haroon Physics, JMI ( Delhi) R.S.
87 Dr. Sarita Agarwal Physics, ANDC, University of Delhi Faculty
88 Kshama Sharma (W) Sindhi Kanya Vidhayala, Gwalier UG
89 Mathew Arun Thomas Physics & Astrophysics, University of Delhi M.Sc.-2
90 Shaema Zaman Ahmed Physics & Astrophysics, University of Delhi M.Sc.-1
91 Panchali Dutta (W) Physics & Astrophysics, University of Delhi M.Sc.-1
92 Vedant SSNC, University of Delhi B.Sc-1
93 Kiran (W) SSNC, University of Delhi B.Sc.-1
94 Monika (W) SSNC, University of Delhi B.Sc.-1
95 Neelam Tyagi (W) SSNC, University of Delhi B.Sc.-1.
96 Bhawana Balayan (W) SSNC, University of Delhi B.Sc.-1
97 Priyanka Kumari SSNC, University of Delhi B.Sc.-1
98 Montu Gupta SSNC, University of Delhi B.Sc.-1
99 Sumit Keshri SSNC, University of Delhi B.Sc.-3
100 Lokesh Rana SSNC, University of Delhi B.Sc.-3
101 Daljit Singh Geography, SSNC, University of Delhi faculty
102 Ravindra Kr Verma NITIE Mumbai R.S.
103 Meena Physics & Astrophysics, University of Delhi M.Sc.-2
104 Sangita Physics & Astrophysics, University of Delhi M.Sc.-2
105 Bijender Dahiya Physics, SSNC, University of Delhi Faculty
106 Dr. Sonia (W) YMCA, Faridhabad (Haryana) Faculty
107 PN Gajjar Physics, Gujrat University, Gujrat Faculty
108 Dr. M.M. Hussain Applied Science, JMI, Delhi Faculty
109 Meenakshi Malik Scientist, NCIPM, ICAR, New Delhi Scientist
110 Nidhi Chopra SOCIS, IGNOU, New Delhi R.S.
111 Monika Sharma Physics & Astrophysics, University of Delhi R.S.
112 Harish Kumar Syndicate Bank, New delhi MCA
113 Shweta Yadav NIT , Kurukshetra ( Haryana) M.Tech.
114 Dr. Sanjay Tiwari SOSE, Pt. Ravishankar Shukla Univ., Raipur Faculty
115 Santhust Kumar Physics & Astrophysics, University of Delhi R.S.
116 Varun Giri Physics & Astrophysics, University of Delhi R.S.
117 Dr. Deepika IGNOU, Delhi Faculty
118 Alok Shaurya IISER Kolkata Int. M.S.
119 Pinky Keshav Mahavidhayala, University of Delhi B.Sc.-2
120 Dr. G.K. Parashar Chemistry, SSNC, University of Delhi Faculty
121 Dr. P.V. Khatri Commerce, SSNC, University of Delhi Faculty
122 Dr. Suman Yadav Chemistry, SSNC, University of Delhi Faculty
123 Dr. Namarta Physics, SSNC, University of Delhi Faculty
124 Rupali Bhardwaj KIET, Ghaziabad Faculty
125 Dr. Anil Upadhyay Inst. of Management & Rscrh., Ghaziabad Faculty
126 Dr. Jagbir Singh Geography, SSNC, University of Delhi Faculty
127 Dr. Kriti Batra Physics, IP University Faculty
128 Mukhtiyar Singh Physics, Kurukshetra University R.S.
129 Dr. Zafrul Hassan Physics & Astrophysics, University of Delhi R.A.
130 Dr. MD Shahabuddin Physics & Astrophysics, University of Delhi R.A.
131 R. Gupta Geography, SSNC, University of Delhi Faculty
132 Dr. Shiva Upadhayay Physics, SSNC, University of Delhi Faculty
133 Dr. S.B. Tyagi Chemistry, SSNC, University of Delhi Faculty
134 Dr. Rajesh Giri Rajdhani College, University of Delhi Faculty
135 Dr. Praduman Kumar Hindu College, University of Delhi Faculty
136 Dr. JKS Taank Deshbandhu College, University of Delhi Faculty
137 Haren Ram Zoology, SSNC, University of Delhi Faculty
138 Dr.VP Rana History, SSNC, University of Delhi Faculty
139 Dr. Babu Lal Physics, SSNC , University of Delhi Faculty
Used Notations: R.S. – Research Scholar
R.A. – Research Associate
140 Neha Sharma GJUS&T Hisar ( Haryana) M.Tech.
141 Sangeeta GJUS&T Hisar ( Haryana) M.Tech.
142 M. Prasad Pondicherry Eng. College, Pondicherry M.Tech.
143 Amita Mathematics, IISc, Bangalore Int. Ph.D.
144 Urvashi Arya Physics & Astrophysics, Univ. of Delhi R.S.
145 Rakesh Malik Physics & Astrophysics, Univ. of Delhi R.S.
146 Shveta Kundra Bhatia Computer Science, SSNC, Univ. of Delhi Faculty
147 Neetu Malik Aditi Mahavidhala, University of Delhi Faculty
148 Indu BM College of Education, Haryana M.Ed.
149 Dr. Vinod Nautiyal Physics, SSNC, Univ. of Delhi Faculty
APPENDIX – II
Programme of Workshop
Thursday, 01st July 2010
Registration : 9.00 AM -10.30 AM
at Department of Physics & Astrophysics, North Campus, University of Delhi
Inaugural Session 10.30AM to 12 Noon
Welcome Address Dr.S.K.Kundra,
Principal, Swami Shraddhanand College
About the workshop Dr. Mukesh Kumar,
Convener, CSW
About the Physics Department Prof. A.G. Vedeshwar,
Head (O), Dept. of Physics & Astrophysics, University of Delhi
About the DUCC Prof. Ajay Gupta,
Director, DUCC, University of Delhi
Opening Address Hon’ble Chief Guest
Prof. A.K.Bakshi
Director ILLL, University of Delhi
Vote of Thanks Sh. Vijender Mann,
Chairman, Governing Body, Swami Shraddhanand College
Key-Note Address Dr. D. Preeven
Scientist, Ministry of Earth Science
High Tea 12.00 Noon to 12.30 PM
01.07.2010 ( Thursday )
Technical Session ( 12.30 PM to 01.45 PM)
Chairperson : Dr. JKS Taank Co-Chairperson : Dr. Vedpal
Raportier : Dr. Prduman Rana
Lunch Break : 01.45 PM to 02.45 PM
Technical Session ( 02.45 PM to 05.00 PM)
Chairperson : Dr. PV Khatri Co-Chairperson : Dr. Kriti Batra
Raportier : Miss Amita
3.45-4.00 Tea Break
02.07.2010 ( Friday )
12.30 - 1.30 Computational Mathematics- Some
Challenges
Prof. Mohan K Kadalbajoo
Department of Mathematics, IITK
2.45 - 3.45 Solving Diffusion Equation on
Arbitrary & Stochastic Boundaries:
Application to Problems in Chemistry
Professor Rama Kant Dept. of Chemistry, University of Delhi
4.00 - 5.00 Obtaining petrophysical parameters
form digital models of reservoir rock
Dr. Bibhu Biswal
Dept. of Physics, Venky. College, DU
Technical Session ( 09.30 AM to 01.15 PM)
Chairperson : Dr. Poonam Salotia Co-Chairperson : Dr. Mujeeb ur Rahman
Raportier : Dr. D. Anandhi
12.00-12.15 Tea Break
01.15-2.00 Lunch Break
Demonstrations Session ( 2.00 PM to 5.00 PM)
Chairperson : Dr. Radhey Shayam Co-Chairperson : Dr. Kriti Batra
Raportier : Mrs. Shveta Kundra Bhatia
3.30-3.45 Tea Break
03.07.2010 (Saturday) & 04.07.2010 (Sunday)
Holiday
05.07.2010 ( Monday )
09.30-10.00 Discussion Session
10.00-11.00 Information technology in Indian
Agriculture System – Case studies
Prof. H. Chanrasekharan
Head, Simulation & Informatics, IARI
11.00-12.00 Bioinformatics Concepts &
applications
Dr. D. N. Latha
Bioinformatics center, Venky. College, DU
12.15-1.15 Doing Chemistry with Computer Professor Rita Kakkar Dept. of Chemistry, University of Delhi
2.00-2.45 Knoppix 6.2, GNU plot, LYX &
SCILAB
Dr. Sanjay Chauhan
Hindu College, University of Delhi
2.45-3.30 SPSS Dr. Namita
Sr. Programmer, DUCC
3.45-5.00 Experiments of demonstrations DUCC LABS
Technical Session ( 09.30 AM to 01.00 PM)
Chairperson : Dr. R. Giri Co-Chairperson : Dr. S.K. Soni
Raportier : Mr. Ravinder Kumar
12.00-12.15 Tea Break
01.00 -01.45 Lunch Break
Technical Session ( 01.45 PM to 05.00 PM)
Chairperson : Dr. Kalawati Co-Chairperson : Dr. Sarita
Raportier : Miss. Nidhi Chopra
03.45 -04.00 Tea Break
06.07.2010 ( Tuesday )
09.30-10.00 Discussion Session
10.00-11.00 Understanding Protein function by
Simulation
Prof. P. Bandyopadhyay School of Information & Technology, JNU
11.00-12.00 Simulation in Phononics - an
introduction
Professor P.N. Gajjar
Head, Physics, Gujrat University
12.15-12.35 Path feasibility of C program using
CFG
Miss Sangeeta Tanwar
G.J.U. S&T Hisar, Haryana
12.35-01.00 Simulation tool for service discovery Miss Neha Sharma
G.J.U. S&T Hisar, Haryana
01.45- 02.45 Parallel Programming paradigm -
- a scientists perspective
Dr. Y Sudhakar
Cray Inc
02.45- 03.45 Simulation of Electronics device Professor Sanjay Tiwari Pt Ravishankar Shukla University, Raipur
04.00-5.00 MATLAB Dr. Dinesh Ganotra
SAS, IP University
Technical Session ( 09.30 AM to 11.30 AM)
Chairperson : Dr. PN Gajjar Co-Chairperson : Dr. Anil Kumar
Raportier : Dr. Mujeeb ur Rahman
11.30-11.45 Tea Break
Demonstrations Session ( 11.45 AM to 01.15 PM)
Chairperson : Dr. Vinod Singh Poonia Raportier : Dr. Deepika
1.15 -2.00 Lunch Break
Demonstrations/ Experiments Session ( 2.00 PM to 5.00 PM)
After 1 hour groups interchange their experiments (G1-G2-G3)
3.15-3.30 Tea Break
09.30-10.00 Discussion Session
10.00-11.00 Genetic Search for redundancy
optimization in complex systems
Professor Manju Aggarwal
Dpt. Of Operational Research, DU
11.00-11.30 Surface Water quality Modeling Dr. Ravindra Kumar verma
NIIE, Mumbia
11.45-12.30 Data Modeling with Oracle 9i Dr. Seema Sapral Sr. Programmer, DUCC
12.30-01.15 Python Mrs. Shveta Kundra Bhatia SSNC, DU
2.00-5.00 Experiments of demonstrations
G1: Python 2.00 PM - 3.00 PM
G2: Linux 2.00 PM - 3.00 PM
G3 : Oracle 2.00 PM - 3.00 PM
DUCC Labs
07.07.2010 (Wednesday )
Technical Session ( 9.30 AM to 11.35 AM)
Chairperson : Prof. S. Kukreti Co-Chairperson : Dr. Anil Kumar
Raportier : Miss. Amita
01.30-2.15 Lunch Break
Workshop Feedback Session ( 02.15 PM to 03.15 PM)
Chairperson : Dr. JKS Taank Co-Chairperson : Dr. Sarita
Raportier : Miss. Amita
09.30-09.50 Neural Network & data mining Mr. Lavneet Singh
Agra University, Agra
09.50-10.50 Drug Design and Development
- Modeling
Professor Madhu Chopra
ACBR, University of Delhi
10.50- 11.35 Image Restoration of Medical
Images using iterations method
Dr. Anil Kumar Singh
Allahabad University
11.35-11.50 Tea Break
Technical Session ( 11.50 AM to 01.30 PM)
Chairperson : Dr. Sarita Co-Chairperson : Dr. Anil Upadhyay
Raportier : Miss. Urvashi
11.50 -12.50 Numerical Weather prediction –
Experiences & Challenges
Dr. John P Georg
NCMRWF
12.50- 01.10 Possible attacks in optical
internet
Mr. Prasad M.
Pondicherry Eng. College,Pondicherry
01.10-01.30 A Notion from logic to Artificial
intelligence
Miss. Nidhi Chopra
IGNOU, Delhi
2.15-3.15 Discussions, feedback of the workshop from participants
Workshop Valedictory Programme ( 03.15 PM to 04.30 PM)
07th July 2010
at Department of Physics & Astrophysics, North Campus, University of Delhi
Welcome Address Dr. Mukesh Kumar,
Convener, CSW2k10
Workshop Reports Dr. JKS Taank
Chairperson, Discussion & feedback session CSW2k10
Valedictory Address Prof. A.G. Vedeshwar,
Head (O), Dept. of Physics & Astrophysics, University of Delhi
Valedictory Address Sh. Neeraj Khatri,
Dy. Director, Ministry of Environment & Forests, Govt. Of India
Valedictory Address Hon’ble Chief Guest
Dr. Pratibha Jolly
Principal, Miranda House college, University of Delhi
Certificates - Distribution by hon’ble guests
Vote of Thanks Dr. S.K. Kundra,
Principal,Swami Shraddhanand College, University of Delhi
High Tea 4.30 PM