National Ecological Observatory Network (NEON) Domain 11...
Transcript of National Ecological Observatory Network (NEON) Domain 11...
National Ecological Observatory Network (NEON)
Domain 11 Core Tower, Soil Sampling Array, Terrestrial Sampling, Aquatic Array, and Aquatic Sampling at Lyndon B. Johnson National Grasslands
Proposal to USFS, Lyndon B. Johnson National Grasslands
National Ecological Observatory Network
NEON, Inc. 1685 38th Street Suite 100 Boulder, CO 80301 www.neoninc.org
NEON Proposal for Domain 11 Lyndon B. Johnson National Grasslands
This proposal has been prepared for the NEON, Inc. Domain 11 Core tower, terrestrial, and aquatic sites
located in the Lyndon B. Johnson National Grasslands and Pringle Creek. The proposed term for the
tower site, soil array, terrestrial sampling and aquatic array is approximately 30 years. The actual ground
disturbing activities will be limited to the tower foundation, instrument hut foundation, soil arrays, soil pit,
staging areas, access paths to the instrument hut and soil arrays, aquatic infrastructure, access paths
and stairs at Pringle Creek, power and communications runs, and small disturbances from terrestrial
sampling using beetle pitfall traps and collecting soil samples.
Purpose and Need for Facility
Justification The nation’s Grand Challenges in environmental science have been reviewed by the National Research
Council, the International Geosphere-Biosphere Programme, the Millennium Ecosystem Assessment,
Diversitas, and the US Climate Change Science Program. The Grand Challenges identify tasks within the
environmental science field requiring additional research to yield scientific and practical information for
the future. Three challenges have been identified as causes of change in continental – scale ecology
which could be addressed by a continental – scale observatory system: climate change, land use change
and invasive species.
The National Ecological Observatory Network (NEON/ NEON, Inc.) will establish a new level of ecological
science. It is the first ecological observatory network designed to test and develop ecological theory by
detecting and forecasting ecological change at continental scales over multiple decades. Such research
will enable a deep understanding of large-scale processes, feedbacks, and implications for both
ecosystems and human societies. Continuous NEON data streams, made possible by state-of-the-art
computing power and sensor and communications technologies, will be a national resource for ecological
research.
Objective
NEON is a non-profit, continental-scale observatory for discovering and understanding the impacts of
climate change, land-use change, and invasive species on ecology. NEON partitioned the United States
into 20 eco-climatic domains, each of which represents different regions of vegetation, landforms, climate,
NEON, Inc. 1685 38th Street Suite 100 Boulder, CO 80301 www.neoninc.org
and ecosystem performance. In each domain NEON will gather long-term data on ecological responses
of the biosphere to changes in land use and climate, and of feedback with the geosphere, hydrosphere
and atmosphere. The NEON Observatory is the first initiative in the biological sciences to be supported
through the National Science Foundation’s Major Research Equipment and Facilities Construction fund.
Each domain will host a fully instrumented core site in minimally managed “wild land” area slated to
operate for the 30-year lifetime of NEON, two relocatable sites related to land use, invasive species,
urban effects to operate for 10-12 years, and aquatic sites. The site proposed at Lyndon B. Johnson
National Grasslands is a proposed core site for Domain 11. The tower and aquatic sites are proposed to
be part of the NEON Observatory for the duration of 30 years.
Terrestrial Design Factors
Site Infrastructure Overview The Lyndon B. Johnson National Grasslands proposed NEON core site requires the installation of an
ecological observatory tower with guy line support, instrument hut, soil array, access paths, terrestrial
sampling plots and buried electrical and communications conduit. The project involves the collection of
data across the Lyndon B. Johnson National Grasslands property for a period of 30 years following the
installation of the scientific equipment. The entire tower, soil array, instrument hut, and path construction
survey boundary is approximately 2.25 acres.
The tower will be located at 33.401231, -97.570033 and the instrument hut at 33.401181, -97.569836.
The soil array will extend approximately 462 ft. from the tower along a perpendicular path. Ecological
samples and measurements will be collected through terrestrial sampling. Sampling plots will be
distributed throughout the Lyndon B. Johnson National Grasslands property and will be minimally
invasive. A 60% design review was conducted with the Lyndon B. Johnson National Grasslands staff on
August 12, 2014. On April 21, 2015 NEON personnel met with Lyndon B. Johnson National Grasslands
staff to walk the site and discuss any required design changes. This proposal reflects the changes
discussed during that April site walk. Please see appendix A for a general layout of the proposed tower
site.
Tower NEON proposes to construct a 72 ft. tall square lattice tower supported with four dead man guy anchors.
The four guy anchor foundations would be placed at an approximate depth of 10 ft. and will measure
NEON, Inc. 1685 38th Street Suite 100 Boulder, CO 80301 www.neoninc.org
approximately 6x8 ft., a small portion will be visible above grade where the guy wires connect to the
anchor. Each guy anchor will require a 20 ft. clear radius. The tower foundation footprint will be
approximately 8x8 ft. The tower will serve as a supporting structure for scientific sensors at various
heights above the ground. It will be equipped with an internal ship ladder system for access and
landings/working platforms for personnel observations and installations.
Instrument Hut
NEON proposes to install a prefabricated instrument hut to house electronic instrumentation, gas bottles,
tools, safety equipment, and other items for use during operations. The hut measures 8x20x9 ft. with a
10x20 ft. footprint. The foundation will be comprised of (6 to 8) 2x2 ft. concrete piers for the hut. The piers
will be 2 ft. deep, with a maximum underground footing width of 3.5 ft. The tower will be located
approximately 62.5 ft. from the tower to the East.
Example of a NEON instrument hut.
Example of a NEON tower with instruments.
NEON, Inc. 1685 38th Street Suite 100 Boulder, CO 80301 www.neoninc.org
Soil Array Soil arrays plots will be established off of the 462 ft. path extending south of the tower. There will be five
soil array plots measuring approximately 16.4x16.4 ft. located approximately 33 ft. from the path. Each
array will be accompanied by an electrical arbor. The arbors will measure 4.5 ft. tall with two sign posts
mounts. Each arbor will be accompanied by a device post with NEMA box to supply power. Each plot will
have several in ground and above ground sensors installed. Each belowground sensor will be installed in
a hole approximately 2.5 inches in diameter either vertical or at a 45 degree angle. The depth of the
sensor will depend on the particular measurement to be collected and the site, the maximum depth is 7 ft.
The soil array holes will be made using a portable Geoprobe machine. The sensors will collect data
including soil temperature, soil water content, soil CO2, minirhyzotron, soil heat flux plates, line quantum
and precipitation throughfall collector (a tipping precipitation gauge that is installed under the plant
canopy).
Precipitation Collection (DFIR) The Double Fence Intercomparison Reference (DFIR) is a primary standard precipitation collection
system that will be deployed at NEON Core tower sites. This assembly contains weighing-type
precipitation collector (triple redundancy), one metal-altar shield and two double-wooden octagonal
fences following U. S. Climate Reference Network (USCRN) specifications.
Example of a soil array arbor with on grade (non-trenched) conduit.
NEON, Inc. 1685 38th Street Suite 100 Boulder, CO 80301 www.neoninc.org
There will be two DFIRs at the Lyndon B. Johnson National Grasslands, one at the tower location and
one at the aquatic location. The tower DFIR will be located at 33.399417, -97.566975 and will be
surrounded by three fences. The USCRN required fences are wooden, measure 6 ft. high and are placed
in a 26 ft. diameter octagon. These fences act as wind shields and improve the ability to measure both
liquid and solid precipitation without influence from horizontal winds. In addition to the USCRN required
fences, NEON will also install a cattle panel fence to protect the tower DFIR and USCRN fences from
cattle. The precipitation collector will measure approximately 5 ft. tall and 4 ft. in diameter. The center
post and four supporting posts will be anchored with concrete. Up to 22 trees may be removed in the
vicinity of the DFIR to provide the necessary 52 m (170.6 ft.) buffer for the precipitation gauge.
Auxiliary Portals and Device Posts The auxiliary portal is a designated point near the edge of the tower observation area where the utility
company’s power and data services enter the site location. Device posts and portals provide
infrastructure to distribute power and communications to sensors on site. Device posts are approximately
4.3 ft. tall and 1 ft. wide. Portals are approximately 4.3 ft. tall and 3 ft. wide.
The tower auxiliary portal and a transformer will be located at approximately 33.401333, -97.564989
however, micrositing may occur with coordination of local utility company. The auxiliary portal will be
approximately 1633 ft. from the instrument hut.
NEON will install device posts with NEMA box enclosures to supply power. These posts are proposed
along the soil array arbors and independent sensors, such as the DFIR, to enable line of sight
communication between sensors. The NEMA box enclosures can be housed on the ground to minimize
visual impacts if required by the site host.
Example of a DFIR system; left to right: internal precipitation gauge and outer protective fencing.
NEON, Inc. 1685 38th Street Suite 100 Boulder, CO 80301 www.neoninc.org
Power and Fiber Distribution NEON will use power supplied by Wise Electric Cooperative. Underground utilities and communications
conduit will be trenched and completed with a standard walk-behind trencher to minimize impacts.
Extended overhead lines will be kept clear of trees by hand clearing saplings, as necessary, for the
duration of the NEON project.
Proposed power and communication conduit will run from the existing utility pole located at 33.393717, -
97.568017. The power and conduit lines will be trenched approximately 4,037 linear feet from the existing
utility pole, along the fence line and fire break to the proposed auxiliary portal (located approximately at
33.401333, -97.564989). Then the conduit will be trenched approximately 1,633 linear feet to the
instrument hut (located approximately at 33.401181, -97.569836), approximately 462 linear feet from the
hut to the end of the soil array, and also approximately 650 linear feet down a short stint of the horse trail
to the DFIR (located approximately at 33.399417, -97.566975).
Boardwalks, Paths and Improved Surfaces NEON proposes to lay gravel as needed for safe and reliable passage over the proposed power and
communication conduit/ access route running from the existing utility pole located at 33.393717, -
97.568017, along the fence line and fire break to the proposed staging and parking area located at
33.401306, -97.564889. The access route will be approximately 4,037 linear feet.
NEON proposes a 40x40 ft. staging and parking area. This area will be located at the entrance to the site,
adjacent to the auxiliary portal and fire break at 33.401306, -97.564889. The area will be improved with
woven geotextile and class 6 base course. It will become the long term parking area for operations staff to
reduce disturbance to the site.
NEON proposes to create an approximately 830 ft. long unimproved path from the staging area to the
edge of the construction boundary. In addition, technicians will walk down the existing horse trail to
access the DFIR.
NEON proposes to construct approximately 803 ft. long improved gravel path from the edge of the
construction boundary to the instrument hut. The path will be 4 ft. wide with construction constrains
extending 2 ft. parallel from the edge of the path. The path will be improved with class 6 base course.
NEON, Inc. 1685 38th Street Suite 100 Boulder, CO 80301 www.neoninc.org
NEON proposes to construct approximately 462 ft. long improved gravel path from the tower extending
the length of the soil array. The path will be 2.5 ft. wide with construction constrains extending 2 ft. from
the edge of the path. The path will be improved with class 6 base course.
NEON proposes to construct an aluminum boardwalk around the instrument hut and to the tower base.
The boardwalk will be approximately 128 ft. long by 3 ft. wide.
NEON proposes to mechanically remove the briar and nuisance vegetation within the tower construction
limits to ease construction and access to the site during construction. NEON will make every attempt to
avoid substantial trees during the removal process.
Fencing and Security
The soil horizon pit will be covered with plywood and surrounded with construction fence during the few
days the pit is open.
The tower DFIR will be enclosed with three fences. Two are U. S. Climate Reference Network (USCRN)
required wooden fences measuring 6 feet high and are placed in a 26 foot diameter octagon. The third
fence will be a cattle panel fence to protect the DFIR and wooden fences from cattle.
Two 8x4 ft. tube gates will replace the existing fence gate at the entrance of the public road to the site.
The existing horse gate will not be replaced.
Soil Horizon Pit A soil horizon pit will be dug 5x6 ft. wide, up to 7 ft. deep at 33.401411, -97.567275. The pit is used for
identifying the soil horizon characteristics and will have samples of dirt removed. The soil pit will be open
for approximately one week and will coincide with construction activities. While the pit is open it will be
covered with plywood and surrounded with construction fence as a safety precaution. Upon completion,
the pit will be re-filled with previously excavated dirt.
NEON, Inc. 1685 38th Street Suite 100 Boulder, CO 80301 www.neoninc.org
Terrestrial Sampling Terrestrial plot sampling is proposed to occur throughout the Lyndon B. Johnson National Grasslands
property boundaries. The sampling activity consists of collection methods that are considered to be low
disturbance including vegetation clipping, soil sampling, bird observations, small mammal trap-and-
release, gravid mosquito trapping, beetle pitfall trapping and tick drag sampling. Sampling will be
conducted within several different types of plots. Plots will be marked with PVC stakes and/or aluminum
disk markers flush with the ground. The USFS will be provided with list and map of possible plot locations
containing contingencies. NEON will work with the USFS to avoid any exclusion areas or known research.
Please see appendix B for a map of contingency terrestrial plot locations.
Approximately 30 tower plots: Tower plots measure approximately 20x20m and are located within
the tower’s airshed. Plant and soil samples will be collected from tower plots.
Approximately 30 distributed plots: Distributed plots include base plots, mosquito points, tick
transect loops, small mammal grids and bird grids.
o Base plots measure 40x40 m and host sampling for plants, beetles, and soils.
o Approximately 6 tick transect loops measuring 40x40m.
o Approximately 6 to 8 small mammal trapping grids measuring 90x90m.
o Approximately 10 to 12 bird observation walking grids measuring 500x500m, and
o Approximately 10 mosquito collection points.
Ground Beetles and Vertebrate Bycatch Shifts in ground beetle distribution and populations can indicate significant changes in the local ecological
community. Beetles will be collected using pitfall traps embedded in the ground. The cups are 7 cm in
depth and 11 cm in diameter. The traps will use a diluted solution of non-toxic propylene glycol to
Example of the soil horizon pit; left to right: initial assessment and sample collection.
NEON, Inc. 1685 38th Street Suite 100 Boulder, CO 80301 www.neoninc.org
preserve the samples for DNA analysis. The traps will be checked bi-weekly throughout the growing
season (typically April through September, but varies based on site) and will be removed when the
sampling season ends. Each pitfall trap is covered with a low clearance 20 cm x 20 cm hard plate cover
(approximately 1.5 cm above the lip of the cup) to mitigate non-target species collection. The cover
denies access to all but the smallest vertebrates; however, it is possible for very small amphibians,
reptiles, and mammals to still enter the trap. As an added precaution, a threshold of 15 individuals per
species, per plot, per season has been established. When 15 cumulative individuals of any given
vertebrate species are captured at a single plot in one sampling season, a problem ticket will be triggered
for consideration by NEON staff scientists. A copy of NEON’s IACUC protocols is available upon request.
Mosquitoes Mosquitoes are sensitive to climate variation and they are important as disease vectors (e.g. West Nile
virus and Dengue). Mosquitoes will be collected using CO2 baited light traps. These traps operate by
slowly releasing CO2, mimicking the exhaled breath of an animal. The CO2 and light attract mosquitoes
which are drawn into the trap by a fan. Mosquito traps will be located in each of the major vegetation
types.
Ticks Ticks will be collected to improve understanding of how the prevalence of infectious agents (e.g. Lyme
disease) changes over time within ecosystems. Nymphal and adult-stage ticks will likely be collected
March through November using a drag sampling method, pulling a small flannel 1m x 1m swath of cloth
across the ground. Sampling will occur at six different locations at each site.
Birds NEON will contract experienced field technicians to collect bird abundance and diversity data using
passive techniques of point counts involving only visual and auditory observations at pre-determined
locations. There will not be any collection or capture of bird species. Point counts involve a single
observer standing at a survey location for about 10 minutes with only binoculars, a laser rangefinder, and
a datasheet. The number of survey locations varies with the size of a site, ranging from 20 points up to
135 points. Surveys will be conducted within 20 minutes of the official sunrise time once or twice every
breeding season at each site. Timing of breeding varies across sites, but typically occurs from April - June
in much of the US. Technicians will conduct point counts over a minimum of 2 days up to a maximum of
21 days per year.
NEON, Inc. 1685 38th Street Suite 100 Boulder, CO 80301 www.neoninc.org
Small Mammals NEON will collect data about small mammals including diversity, reproductive condition, demography, and
seroprevalence in order to better understand how environmental and land use changes are affecting
populations over time, including the occurrence of the pathogens that infect them (e.g., hantaviruses,
Lyme disease). A mark-recapture study of small mammals will be conducted with blood collected from
target species for offsite pathogen screening and ultimate archiving at an accredited institution. Sherman
live traps (folding or non-folding, approximately 3 x 3.75 x 9 or 12 inches long) or Tomahawk live traps (5
x 5 x 16 inches long) will be used for trapping. Up to eight trapping grids will be deployed per site, with
three grids designated for blood collection. Each grid will consist of 100 live traps (10 m spacing – 10
rows – 10 columns). Traps will be set for three consecutive nights per bout every month at Lyndon B.
Johnson National Grasslands. Traps will be set as the sun sets and checked each consecutive morning
as soon as it is light enough to work.
All captured individuals will be marked with either one numbered ear tag (0.25 inches long, National Band
and Tag, Model 1005-1) or a subcutaneous, RFID PIT tag (pre-sterilized 8mm or 12mm - Biomark, Inc.).
Mode of tagging will be based on the length of the external pinnae, as some species, such as voles (e.g.,
Microtus spp., Myodes spp.) and pocket mice (e.g., Chaetodipus spp., Perognathus spp.), do not have
sufficient pinnae for securing ear tags. Ear tags are small, metal, and uniquely numbered (4 numbers
each). Ear tags do not cause unnecessary pain when applied quickly and with sharp and correct
application (using provided tool and placed in cartilage at base of external pinnae). PIT tags are injected
under the skin on the back of the animal. This placement does not impede movement, and tags do not
migrate from this location. In rare cases, if PIT tagging is deemed undesirable, considering the condition
of an animal (e.g., highly stressed), an animal may be released without tagging. Shrews will not be
tagged, but instead marked on the belly with a colored permanent marker, if not previously marked, and
release immediately. Individuals are marked to allow us to assess and study population dynamics,
reproductive condition, timing of colonization of new individuals, longevity and movement, and a variety of
other aspects of life history that require permanent individual marking. Rabbits, moles, gophers and
squirrels will be released with no handling.
Tissue samples to be collected will include one ear tissue sample from the untagged ear for genetic
analyses, using a sterile 2 mm tissue biopsy punch, and clipped whiskers and/or hair for isotopic analyses
to assess changes in water stress. Fecal samples will also be collected from captured individuals. Rabbits,
moles, gophers and squirrels will be released with no handling. Samples will not be collected from shrews.
NEON, Inc. 1685 38th Street Suite 100 Boulder, CO 80301 www.neoninc.org
Blood samples will be collected from target species. Samples will not be collected from Sciurids, Soricids,
Talpids, Geomyids, any individual weighing less than 10 grams, any individual with a pronounced or
physically debilitating injury, any individual that has already been captured and bled during a current
sampling bout, and/or any species excluded from bleeding based on permitting regulations. For additional
information regarding bleeding protocols please refer to the attached proposal.
All captured individuals will be processed according to the listed methodologies and released at the point
of capture. Large squirrels, gophers, weasels and rabbits will be released with no processing. Shrews will
be measured and identified and then released when possible. A copy of NEON’s small mammal IACUC
protocol is available upon requested.
Plants NEON will collect plant data to better understand how plant species vary seasonally and throughout the
years. Rare, threatened and endangered species will not be collected.
Aboveground biomass/productivity sampling
Clip harvest protocol – minimally destructive (results in collections)
-Herbaceous biomass clipped within distributed and tower plots
-1 clip per bout per plot from a 0.1m x 2 m strip; 2 clips per bout per plot if site is managed for grazing.
-Data collected 1 time per year, every 3 years at distributed plots
-Data collected 1-2 times per year, every year at Tower plots; data collected every 4 weeks in Tower plots
if site is managed for grazing.
-1 additional clip bout held every 5 years to address herbaceous biomass biogeochemistry. 1 clip per
selected plot from a 0.1m x 2 m strip. Four tower plots and 16 distributed plots will be sampled.
Special Case Protocol: Bryophyte harvesting - related to Clip Harvest protocol; only occurs if a site has
>20% moss/bryophyte cover across plots.
-minimally destructive (results in collections)
-Data collected 1 time per year in tower plots only
-1 clip per bout per plot from 0.1m x 2m strip
Plant Coarse Downed Wood protocol – tallying and bulk density sampling from nonliving downed logs
and branches (bulk density sampling results in collections)
-Measured/collected within distributed and tower plots
-Nondestructive tally measurements once every three years
NEON, Inc. 1685 38th Street Suite 100 Boulder, CO 80301 www.neoninc.org
-Bulk density samples collected once during first 3 years; collected once again 5 years after first collection
Plant Litter fall protocol – collection from nonliving plants (results in collections)
-Measured/collected within tower plots
-Elevated traps: Deciduous forest traps will be deployed year round and will be collected once in the
spring and once every two weeks during leaf senescence.
-Elevated traps: Mixed forest traps will be deployed year round and will be collected at least once per
month and once every two weeks during leaf senescence.
-Elevated traps: Conifer forest traps will be deployed year round and will be collected year round
-Ground traps: traps will be deployed year round – collected once per year.
Plant Measurement Veg Structure protocol – minimally destructive (no collections – tagging)
-Measured within distributed and tower plots
-Data collection 1 time per year, every three years at distributed plots
-Data collection 1 time per year, every year at tower plot
Plant Leaf area index protocol – nondestructive
-Measured/ collected within distributed and tower plots
-Data collection 1 time per year, every three years at distributed plots
-Data collection every 2 weeks during the growing season, annually at tower plots
Plant phenology protocol – nondestructive
-Measured/ collected within distributed and tower plots
-Data collection frequency depends on plants and growing season.
Plant diversity protocol – minimally destructive (results in collections)
-Measured/ collected within distributed and tower plots
-Initial collection of 20-40 common species to be collected, pressed, mounted.
-Non-destructive measurements made one or two times annually.
Belowground biomass sampling
Plant belowground biomass protocol – minimally destructive (results in collections)
-Measured/ collected within tower plots
-Collections one time per year, every five years.
NEON, Inc. 1685 38th Street Suite 100 Boulder, CO 80301 www.neoninc.org
Soils NEON will collect soil samples to analyze chemical, physical, isotopic, microbial, and biological properties.
These samples will also provide data for GIS and digital elevation models to create detailed soil maps for
the study sites. Sampling bouts will take place up to three times per year at approximately 10 plots
distributed throughout the site. Sampling events generally correspond with periods of high biological
activity, such as during peak greenness and seasonal transitions. At each plot, three soil samples will be
taken to a depth ranging from 30 cm to 1 meter, and at a diameter ranging between 3.5 cm to 11 cm. Soil
samples will be sent to a laboratory for analysis. Holes will be backfilled according to the property owner’s
specifications.
NEON also proposes a one-time site characterization soil sampling effort subcontracted through the
Natural Resources Conservation Services (NRCS). This assessment is an essential component of
NEON’s mission in understanding the biogeochemical processes at NEON sites. This important work
presents a unique opportunity for Lyndon B. Johnson National Grasslands, NEON and the public to
obtain and share valuable data on the physical and chemical properties of soil at NEON’s long-term
monitoring plots at Lyndon B. Johnson National Grasslands.
The NRCS is a service within the U.S. Department of Agriculture that has been characterizing and
sampling soils for over 100 years. The overarching objective of the NRCS is to conserve soil resources,
and it uses the highest standards when sampling soil. The NRCS has 12 regional offices that employ soil
scientists who are experts in local soil conditions. Through its Web Soil Survey program, it has mapped
soils in over 95% of the nation’s counties, and fulfilling this contract with NEON will add greatly to the
nation’s scientific knowledge.
The goal of this one-time effort is to characterize the physical and chemical properties of the soil
associated with the NEON sampling plots by conducting field observations of soil layers and sampling soil
layers for laboratory analyses. Soil sampling would only occur within NEON distributed and tower plots
previously evaluated by cultural resource contractors. After making field measurements of soil depth and
morphology, about one kilogram of soil material per soil horizon would be collected for laboratory tests.
The combination of field and laboratory measurements will provide critical ecological data for
understanding biogeochemical processes both at your site and across the NEON observatory.
Two soil sampling methods may be used: pit-excavation, and soil coring. The preferred method for soil
survey sampling is by pit excavation, because it both yields higher quality data and generally has a lower
visible impact. Soils often exhibit variable properties over distances and depths of just a few centimeters,
and pit excavation allows direct physical observation of soil horizon variability with depth and permits
accurate sampling of discrete soil horizons, which is critical for understanding overall soil quality and
NEON, Inc. 1685 38th Street Suite 100 Boulder, CO 80301 www.neoninc.org
fertility. Importantly, certain soil measurements such as soil bulk density cannot be made without pit
excavation. The bulk density measurement is essential for converting weight-based values to field
volumes, and for determining the site’s nutrient availability and carbon storage capability.
The standard methodology for soil surveying by pit excavation involves hand excavation of a small pit
approximately one meter square by one meter deep in size. Occasionally, if needed, an additional one
meter deep core will be taken from the floor of the pit for soil categorization purposes and then replaced.
On average, we expect that 15 to 20 plots would be sampled, but the number could range between 10 to
34 plots. At one square meter, a pit’s affected surface area is relatively small - less than 0.01% of the total
surface area of a 40m x 40m plot. During excavation, each soil horizon is carefully collected on a tarp and
kept separate from other horizons. Once sampling is complete, the hole is refilled with the excavated soil,
reassembling the original soil profile layer by layer and striving to ensure that even surface vegetation
remains intact. Because pit excavation technique reconstructs the pre-survey soil conditions, it is
considered less impactful than sampling by a coring device.
The alternative soil sampling method employs a soil coring device, which for this effort involves a hand
auger or spade. Hand augers of about 10 centimeters (4 inches) in diameter will be used to examine soils
to a depth of about one meter. Cored samples would be taken at the same number of plots as for the pit
excavations across the proposed NEON site. In order to obtain a similar amount of material as from pit
excavations, up to 16 core samples may be collected at each plot. After coring is completed, NRCS would
push in the upper edges of the hole to create a sealed surface, leaving behind a slight depression but no
visible hole. Through physical and biological processes the void beneath naturally fills in after a few
months to about a year, depending on soil type. Based on the small core diameter and the sealed surface,
this method should not present a risk to cattle or wildlife. While this is the preferred and most scientifically
sound mitigation strategy, if this method is deemed unacceptable, the NRCS could use other mitigation
procedures such as backfilling holes with clean, non-native soil material. Introducing non-native soil may
change the chemical and physical properties of the soil.
NEON, Inc. 1685 38th Street Suite 100 Boulder, CO 80301 www.neoninc.org
Site 1: Example of a NRCS soil pit during the City of Spokane Soil Survey.
NEON, Inc. 1685 38th Street Suite 100 Boulder, CO 80301 www.neoninc.org
Site 2: Example of a NRCS soil pit during an urban soil survey.
NEON, Inc. 1685 38th Street Suite 100 Boulder, CO 80301 www.neoninc.org
Airborn Observation Platform
The Airborne Observation Platform (AOP) is designed to measure the effects of land use change, and
changes in vegetation state and ecosystem functioning including the presence and effects of invasive
species through the use of airborne remote sensing technologies. Airborne spectroscopy and waveform
LiDAR will quantify plant species type and function, and vegetation structure and heterogeneity at the
scale of individual shrubs and larger plants. Panchromatic photography (30 cm resolution) will retrieve
fine-scale information on land use, roads, impervious surfaces, and built structures. The AOP is aircraft-
mounted and operated instrumentation and will not result in any ground impacts to the National
Grasslands. Flyovers are proposed to occur once a year. Flight paths have not been established, but will
be coordinated with staff at Lyndon B. Johnson National Grasslands and with local air traffic control prior
to any flights.
Aquatic Design Factors
Site Infrastructure Overview The Pringle Creek proposed NEON core aquatic site requires the installation of aquatic monitoring
instruments, meteorological instruments, access paths, wooden stairs, aquatic sampling and buried or
overhead electrical power and communications lines (to be determined). The project involves the
collection of data for a period of 30 years following the installation of the scientific equipment. Tall grasses,
shrubs or other vegetation may need to be trimmed back initially to install infrastructure and then
maintained as part of ongoing maintenance. Over the 30 year project it is also possible that new trees
may start to grow which would need to be removed. Please see Appendix E for a map showing
geographic locations of aquatic infrastructure and the proposed utilities run.
Aquatic Infrastructure Aquatic sensor 1 (S1) and aquatic sensor 2 (S2) will be installed at each end of the aquatic reach. S1 and
S2 are comprised of an approximately 9 ft. long pole with mounted sensors. Each pole will be anchored
into the substrate of the stream. S1 is proposed to be located at 33.378403, -97.783672 and S2 is
proposed to be located at approximately 33.378469, -97.781503. The sensors measure water surface
elevation, specific conductivity, dissolved oxygen, turbidity, chlorophyll a, fluorescent dissolved organic
matter (fDOM), photosynthetically active radiation (PAR), water temperature, and nitrates. The pressure
transducer, staff gauge and digital camera for determining discharge will be co-located with the S2 sensor.
NEON, Inc. 1685 38th Street Suite 100 Boulder, CO 80301 www.neoninc.org
DFIR: The Double Fence Intercomparison Reference (DFIR) is a primary standard precipitation collection
system. This assembly contains weighing-type precipitation collector (triple redundancy), one metal-altar
shield and two double-wooden octagonal fences following U. S. Climate Reference Network (USCRN)
specifications. The USCRN fences are wooden, measuring approximately 6 ft. high with the most exterior
fence placed in a 26 ft. diameter octagon around the precipitation collector. These fences act as wind
shields and improve the ability to measure both liquid and solid precipitation without influence from
horizontal winds. The precipitation collector will measure approximately 5 ft. tall and 4 ft. in diameter. The
center post and four supporting posts will be anchored with concrete. The Pringle Creek DFIR will be
located at approximately 33.377267, -97.781572.
Wet Deposition NADP: The National Atmospheric Deposition Program (NADP) sensor will measure water
chemistry of precipitation. The sensor will extend approximately 5 ft. above ground level. It will be
anchored in the ground with concrete at the depth of approximately 3.4 ft. The sensor is proposed to be
located at approximately 33.377252, -97.781659.
S1/S2 sensors with different anchoring depending on substrate; left to right: bedrock, cobble, sand.
NEON, Inc. 1685 38th Street Suite 100 Boulder, CO 80301 www.neoninc.org
Micromet: The aquatic meteorological station will measure approximately 12.3 ft. tall and 7 ft. in diameter.
It is proposed to be located at approximately 33.377200, -97.781783. The station will measure air
temperature, PAR (above water), incoming radiation (long/short wave), barometric pressure, wind speed
and direction, and relative humidity.
Groundwater monitoring wells: Eight groundwater monitoring wells are proposed at the following
coordinates in Table 1. Micrositing may occur during installation. Each well will vary in depth, depending
on the substrate. The actual well structure will measure approximately 2 inches in diameter and 3 ft. in
height. Each will be anchored with a 6x6 in. concrete footprint. Wells will be installed with a rotary auger.
Each well will contain a sensor to monitor water surface elevation, temperature, and specific conductivity.
Proposed wet deposition sensor.
Proposed aquatic meteorological station.
NEON, Inc. 1685 38th Street Suite 100 Boulder, CO 80301 www.neoninc.org
Well ID Latitude Longitude
D11-PRIN-OW-01 33.377834 -97.784363
D11-PRIN-OW-02 33.378255 -97.783752
D11-PRIN-OW-03 33.377535 -97.783518
D11-PRIN-OW-04 33.378305 -97.782651
D11-PRIN-OW-05 33.378313 -97.781759
D11-PRIN-OW-06 33.377739 -97.782197
D11-PRIN-OW-07 33.378722 -97.783856
D11-PRIN-OW-08 33.378823 -97.781677
Proposed groundwater well; left to right: side-view of installed well and aboveground design of outer casing.
Table 1: Well identification numbers and corresponding GPS coordinates.
NEON, Inc. 1685 38th Street Suite 100 Boulder, CO 80301 www.neoninc.org
Auxiliary Portals and Device Posts The auxiliary portals are located at a designated point near the edge of the aquatic observation area
where the utility company’s power and data services enter the site location. Device posts and portals
provide infrastructure to distribute power and communications to sensors on site. Device posts are
approximately 4.3 ft. tall and 1 ft. wide. Portals are approximately 4.3 ft. tall and 3 ft. wide.
The aquatic auxiliary portals will be located at approximately 33.377797, -97.7833. However, micrositing
may occur with coordination of local utility company. Wise County electric will run overhead power to the
auxiliary portals. After routed through the auxiliary portals, conduit power and communication lines will
transition to underground trenched power to the sensor device posts.
The device posts are proposed along the stream bank and adjacent to independent sensors to enable
line of sight communication between sensor arrays. The NEMA box enclosures can be housed on the
ground to minimize visual impacts if required by the site host. Locations of sensor supporting device posts
are as follows: aquatic micromet device post will be located approximately at 33.377255, -97.781783;
aquatic NADP/DFIR device post will be located approximately at 33.377252, -97.781603; aquatic S1
device post will be located approximately at 33.378353, -97.783672; and the aquatic S2 device post will
be located approximately at 33.378436, -97.7815.
Paths and Improved Surfaces NEON proposes to use an existing USFS road for access and parking near the aquatic site. The
proposed parking area is approximately at 33.376129, -97.781210. In order to park near this area NEON
respectfully requests gate and road access from the USFS so field techs may drive within 426.5 ft. of the
met station and DFIR.
NEON proposes trimmed native vegetative footpaths through the riparian habitat of Pringle Creek. An
unimproved footpath will lead to S1. Aluminum stairs or a ladder are proposed to access S1, it will likely
be located at approximately 33.378289, -97.783154. A second unimproved footpath will lead to S2.
Aluminum stairs or a ladder are proposed to access S1, it will likely be located at approximately
33.378379, -97.781519. Footpaths will require vegetation maintenance throughout the years which may
include cutting tall grass, trimming branches, or cutting new saplings. Please see Appendix D for the
design drawings of NEON’s aquatic site.
NEON, Inc. 1685 38th Street Suite 100 Boulder, CO 80301 www.neoninc.org
NEON also proposes to create a trimmed, unimproved, native footpath for groundwater access. The path
will likely be 3 feet wide. This path will likely be the access route for the ground water well drill.
Fencing and Security
To protect the site from intrusion and to ensure the safety of cattle, the aquatic DFIR, micromet sensor,
and wet deposition NADP may be enclosed by three strand barbed wire fencing.
The aquatic DFIR will be enclosed with three fences. Two are U. S. Climate Reference Network (USCRN)
required wooden fences measuring approximately 6 ft. high with the most exterior fence placed in a 26 ft.
diameter octagon around the precipitation collector. The third fence will likely be a three strand barbed
wire fence to protect the DFIR and wooden fences from cattle.
Aquatic Sampling and Measurements
NEON plans to measure water chemistry, reaeration, discharge, sediment, and the riparian area in
addition to sampling fish, aquatic macroinvertebrates, microbes, and aquatic plants at Pringle Creek.
Water Chemistry Water Chemistry samples will be collected up to 26 times per year. Each 4 liter sample will be collected
as a grab sample. Samples will be analyzed for general chemistry, anion and cations, dissolved and total
carbon and nutrients, stable isotopes of water and particulate carbon and nitrogen, and dissolved gases
(Carbon Dioxide, Methane, and Nitrous Oxide).
Microbes Microbes will be sampled in wadeable streams with water chemistry samples and scrub samples. Microbe
water sampling occurs 12 times per year with monthly water chemistry samples. Water samples will be
collected from surface water with a 4L bottle. Microbial scrub samples will occur 3 times per year, roughly
spring, summer, and autumn. Depending on the stream bottom, these samples will be collected by
scrubbing a small portion of 3-5 cobbles or pieces of wood with gloves, collecting 3-5 small grabs of sand
or silt sediment, or 3-5 small grabs of plant material. Technicians will remove any invertebrates from the
substrate prior to scrubbing. Microbes scrubbed from the cobble or wood will be collected into a tray and
filtered into a capsule filter, sand/silt samples will be places in a Falcon tube, and plant grab samples will
be placed in a Whirl-pak®. Microbe samples will be flash-frozen and sent to a lab for analysis.
NEON, Inc. 1685 38th Street Suite 100 Boulder, CO 80301 www.neoninc.org
Reaeration Reaeration (i.e., gas exchange) is the movement of oxygen from the atmosphere into the water, and is
measured as the net rate (i.e. gain and loss of oxygen) at which gas exchanges across the air-water
interface. Reaeration represents the net flux of O2 and CO2 into and out of the atmosphere, and
therefore accurately quantifying reaeration rates will be important for climate change research and carbon
budget calculations.
Reaeration is measured approximately six to 12 times per year by a simultaneous and continuous
injection of an inert gas, sulfur hexafluoride (SF6), or propane gas in a rare instance. SF6 is inert, has
minimal biological uptake and is deemed safe for aquatic life. The inert gas tracer is bubbled into an area
of slow-moving water in the stream. Approximate gas injection rates for SF6 are 100 mL/min for streams
with flow ~ 50-200 L/s and 200-300 mL/min for large streams >1000 L/s. To account for dilution due to
surface or groundwater inputs, a conservative solute tracer such as chloride (Cl-) or bromide (Br-) is
added to the stream in addition to the inert gas. Rhodamine may be used as the conservative tracer in
rare cases. The conservative tracer is added to the stream at a known rate (based on discharge), aiming
to increase the stream conservative tracer concentration 5-10 mg/L above background (i.e., pre-addition)
levels. Tracer addition needs to only be large enough to detect at the most downstream sampling site
and will vary by location, discharge and background conductivity.
Once the conservative tracer reaches a plateau (i.e., is no longer increasing) at the most downstream
sampling site (measured via a handheld electrical conductivity meter), water and gas samples are
collected at three to four locations downstream of the tracer addition, and the injection is stopped.
Discharge Flow, or discharge, will be studied as it directly affects the physical, chemical, and thermal attributes of a
stream’s ecosystem. NEON will monitor stage (height of water in the stream) to calculate discharge
continuously in all river and stream sites within the Observatory. The discharge data product will be a
crucial input to a number of additional high-level NEON data products, such as stream metabolism and
nutrient fluxes.
The NEON approach to obtaining a continuous record of stream discharge is via two complementary
methods used to generate a stage-discharge rating curve (SDRC). The SDRC is an empirical relationship
(formula) between a stream stage and the associated discharge at that stage which allows automated
measurements of stage to be converted to discharge. NEON staff will collect several concurrent
measurements of stream-level and discharge over a range of stream-levels and flow rates using an in-
NEON, Inc. 1685 38th Street Suite 100 Boulder, CO 80301 www.neoninc.org
stream pressure transducer and collecting measurements with a hand-held velocity meter during wading
surveys. Wading surveys will be conducted biweekly (approximately 26 times per year).
Sediment Sediment samples will be collected up to 5 times per year. Each sediment sample will be collected with a
scoop or hand corer from several deposition zones within the stream. A total volume of 5 liters of
sediment will be collected and analyzed by an external laboratory for trace elements, major metals,
organics, organic contaminants (PAHs/PCBs), and sediment grain size.
Riparian mapping Stream riparian and morphology mapping will occur in King’s Creek once per year during base flow and
at peak greenness. Riparian mapping tasks include recording vegetation composition and canopy cover
estimates. Additionally, bank angle, bank texture, and water height will be recorded.
Fish NEON proposes to collect fish from Pringle Creek. The data collected from fish sampling will provide
biodiversity information indicating ecosystem health, as well as length and weight which can indicate fish
condition or the health of the fish population. Fish are sensitive to changes in their environment and their
tolerance levels to these changes are well known for most species. Consequently, fish community data
can provide information on the health of the ecosystem.
DC or pulsed DC backpack electrofishing will be used to sample fish in the stream reach. The stream
reach is approximately 1 km in length and will be sampled with the electrofisher via a three pass depletion
study over the reach. Passes will be separated by no less than 30 minute intermissions. If electrofishing
is not effective, minnow traps may be used. Electrofishing-related injuries should affect < 1% of fish
captured. If this number is exceeded at the site, the technicians will stop sampling and contact the NEON
Aquatic Ecologist. Fish will be sampled two times per year, once in the spring and again in autumn.
Fish processing will occur after each electrofishing pass ends. Fish will be identified, weighed, measured,
and then released. Respiration will be monitored for anesthetized fish, then returned to water after
handling. Handling time per individual will be 10 minutes or less. Non-target species will be identified to
the lowest practical taxonomic level, photographed if possible, recorded, and then released without
handling. NEON will voucher unknown or unidentifiable individuals in the field (1-5 individuals per taxon);
these individuals plus any mortally injured individuals will be euthanized. Technicians will ensure that they
keep their hands clean and free of chemicals (i.e., insect repellent, sunscreen) and wet during handling. A
copy of NEON’s fish IACUC is available upon request.
NEON, Inc. 1685 38th Street Suite 100 Boulder, CO 80301 www.neoninc.org
Macroinvertebrates Stream benthic invertebrate communities are strongly affected by disturbance, including shifts in nutrient
and pollutant concentrations, physical disturbances such as floods, scouring, freezing, drought, and
biological disturbance such as predation. Benthic invertebrates will be sampled from riffles, runs, snags
and pools. Riffles will be sampled with a surber net, runs will be sampled with a surber net or kicknet,
snags will be sampled with a snag net, and deep pools will be sampled with a corer and/or petite ponar.
Invertebrate sampling occurs three times per year: spring, summer, and autumn. Sampling bouts will
always occur at or near baseflow conditions. Sampling will not occur directly following a flood in the
stream. Collected specimens will be euthanized, preserved in plastic sample jars, and sent to a laboratory
for analysis.
Aquatic plants and algae Macroalgae, bryophytes, lichens, and aquatic plants will be sampled three times per year to track
changes in abundance and diversity. Aquatic plants, bryophytes, and lichens will primarily be identified
in-situ along point transects and collected in quadrats for biomass measurements. Additionally, the
carbon and nitrogen composition of plants and bryophytes will be measured. Biomass samples will be
processed (identified and weighed) by NEON domain staff at the Domain Lab, any specimens that cannot
be positively identified at the domain lab will be sent to external taxonomists. NEON will not collect
endangered species if present.
For the purposes of analysis, algae can be broken into three distinct groups: macroalgae, benthic
microalgae (periphyton), and sestonic algae (algal cells sampled in the water column). Macroalgae will
be sampled as part of aquatic plant, bryophyte, lichen, and macroalgae sampling. Periphyton will be
sampled from riffles, runs, and pools. The majority of the periphyton community may be colonizing the
leaves of aquatic macrophytes (epiphytes) or woody debris at some sites, thus these substrata are
sampled rather than sampling scarcely populated sandy substrata. Aquatic plant and algae sampling
occurs three times per year: spring, summer, and autumn. Sampling bouts will always occur at or near
baseflow conditions. Sampling will not occur directly following a flood in the stream.
NEON, Inc. 1685 38th Street Suite 100 Boulder, CO 80301 www.neoninc.org
Site Access and Activities
Construction The NEON facilities construction team, approximately ten people comprising both of NEON, Inc.
personnel and its contractors, will require access to the site for the duration of the construction period.
Construction typically lasts four to six months. NEON will employ a Construction Site Supervisor to
oversee all contractor actions, implement health and safety protocols, and track daily activity logs at the
site. Every NEON site will be protected to the maximum extent possible during construction. Strict
guidelines and considerations will apply to materials used in construction to minimize their impact on the
environment. NEON will employ appropriate BMPs in all construction design and activities.
Typical construction equipment may include: mini-excavators, skid-steer and pickup trucks. Typical
construction staff include: NEON construction and engineering staff, NEON safety and permitting staff,
NEON scientists, electrical contractors, foundation contractors, the tower and instrument hut assembly
crew, and inspectors.
Operations Once in operation, each NEON site will be managed by a Manager of Field Operations/ Domain Manager,
who will have a supporting staff of approximately five full-time-equivalent (FTE) personnel and multiple
seasonal field technicians. The Domain Manager will be the point-of-contact (POC) for each site’s land-
owner. The tower and aquatic sites will be visited weekly. NEON may request key access to gated areas
of the National Grasslands if the tower or plots are accessible through a locked gate. The Domain Manger
will coordinate sampling schedules with the Forest Service.
Rehabilitation and Reclamation After the 30 year span of the Domain 11 Core Site, NEON will return the site to USFS requirements. The
existing tower and infrastructure will be disassembled and removed. concrete foundations will be left in
place.
NEON, Inc. 1685 38th Street Suite 100 Boulder, CO 80301 www.neoninc.org
Appendix A
100% design drawings of NEON tower.
NEON, Inc. 1685 38th Street Suite 100 Boulder, CO 80301 www.neoninc.org
Appendix B
Proposed NEON tower infrastructure and power/ access.
NEON, Inc. 1685 38th Street Suite 100 Boulder, CO 80301 www.neoninc.org
Appendix C
Proposed tower and contingency plot locations.
NEON, Inc. 1685 38th Street Suite 100 Boulder, CO 80301 www.neoninc.org
Appendix D
100% design drawings of NEON aquatic site.
NEON, Inc. 1685 38th Street Suite 100 Boulder, CO 80301 www.neoninc.org
Appendix E
Proposed Pringle Creek infrastructure and power run locations.