Maturation Rapid Kit Proposal
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Transcript of Maturation Rapid Kit Proposal
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CONFIDENTIAL
Name
Institution
Date Submitted
Date Printed
Produced by
:
:
:
:
:
AHMAD DAUD BIN OM
Institut Penyelidikan Perikanan
12 December 2012
Ministry of Science, Technology and Innovation
Determination vitellogenin level and development of maturation broodstock
kit in giant grouper (Epinephelus lanceolatus)
(06-03-06-SF0021)
02 May 2012
Determination vitellogenin level and development of maturation broodstock kit in giant grouper (Epinephelus lanceolatus) (06-03-06-SF0021)
Determination vitellogenin level and development of maturation broodstock kit in giant grouper (Epinephelus lanceolatus) (06-03-06-SF0021)
Page 1 of 16
PROJECT IDENTIFICATION
A. Project number 06-03-06-SF0021
B. Project title Determination vitellogenin level and development of maturation broodstock kit in giant grouper (Epinephelus lanceolatus)
C. Project leader
Name
NRIC
:
:
AHMAD DAUD BIN OM
661018-08-5187
D. Institution
Name
Address
Tel. No.
Fax. No.
:
:
:
:
Institut Penyelidikan Perikanan
Pengarah Institut Penyelidikan Perikanan (IPP) Batu Maung
6262231
6262210
E. Key words
Giant Grouper Maturation Determination Kit Vitellogenin ELISA
Determination vitellogenin level and development of maturation broodstock kit in giant grouper (Epinephelus lanceolatus) (06-03-06-SF0021)
Determination vitellogenin level and development of maturation broodstock kit in giant grouper (Epinephelus lanceolatus) (06-03-06-SF0021)
Page 2 of 16
OBJECTIVES OF THE PROJECT
A. Specific objective
(i) to determine the vitellogenin level for fish maturation (ii) to develop a rapid and simple maturation broodstock determination kit of Giant Grouper
B. Type of research
Applied research
C. Research Cluster and SEO Categories being addressed by the Project
S&T COREResearch Cluster
SEO Category S2020000 - Animal Production And Animal Primary Products
SEO Group S2020300 - Fisheries
SEO Area S2020301 - Aquaculture product
D. Fields of research
Primary Field of Research
- FOR Category
- FOR Group
- FOR Area
F1090000 - Agricultural Sciences
F1090900 - Aquaculture
F1090909 - Fish reproduction
Secondary Field of Research
- FOR Category
- FOR Group
- FOR Area
(if applicable)
F1080000 - Biological Sciences
F1080100 - Biochemistry
F1080104 - Immunology
Determination vitellogenin level and development of maturation broodstock kit in giant grouper (Epinephelus lanceolatus) (06-03-06-SF0021)
Determination vitellogenin level and development of maturation broodstock kit in giant grouper (Epinephelus lanceolatus) (06-03-06-SF0021)
Page 3 of 16
RESEARCH BACKGROUND
Research background of the project
Project status
B.
Literature review summary
New
Project summary
In order to develop giant grouper culture technology, the seed production technology must be prepared. The success of seed production activity depends on the gonad maturity of broodstock, which is naturally depending on the age, size, feed, environment, season and broodstock management. A range of factors imposed by hatchery practices has been found to influence egg quality such as stress on broodstock brought about by handling, over ripening of eggs and hormone administration in induced spawning. One of the striking features in teleost fish is the plasticity of the sex determination with a range of gonochoristc species, where individuals are either males or females, or species displaying a change in gander during the lifetime. Research works directed to the developing the biotechnology tools to assess gender and maturation status of giant grouper is needed to be developed.
Determination vitellogenin level and development of maturation broodstock kit in giant grouper (Epinephelus lanceolatus) (06-03-06-SF0021)
Determination vitellogenin level and development of maturation broodstock kit in giant grouper (Epinephelus lanceolatus) (06-03-06-SF0021)
Page 4 of 16
Related research
The giant grouper which is similar to other grouper behavior are well-known protogynous hermaphrodite teleost of the family of Serranidae (Smith, 1971). Which is changing sex from female in early life to male at older age, depending on the natural environment of the populations studied (Lasserre, 1972). The point in time at which sex-change occurs is can be interpreted on many different levels (e.g. behavioral, morphological, histological) were effects on broodstocks management of this species, which is difficult particularly concerning the prediction of natural sex inversion (age and/or size) and the artificial control of sex. Sex determination in cultured species is a constraint to broodstock constitution. Individual identification of the breeder gender is necessary to maintain the desired sex ratio to produce the appropriate fingerling number for aquaculture production. Generally, equilibrated or determinate sex ratios are required when mature male and female pairs are necessary for induced or natural breeding. From an academic perspective, sexual transition is a useful process in which to investigate the mechanisms controlling sex determination and differentiation. In most species, phenotypic sex is more or less easily identified in pubertal male or female by specific external characters. In some cases, intra-ovarian biopsies or endoscopies or cannulation technique on anesthetized animals allowed gender identification, even outside the breeding season or even in immature fish. However, this technique has limitation to predict the gander of broodstock. It is necessary to develop the instrument /device or methods which can easily to define the sex change technology for sake of improving the efficiency of aquaculture operations. Currently, no reliable method for gender determination has been described in giant grouper, except may be some morphological characters observed only when fish have initiated courtship behavior. Direct observation of broodstock is not always possible due to water turbidity, and this visual method is not compatible with an efficient broodstock management. Specifically, it does not allow the constitution of male and female mating pairs before the breeding period in order to optimize fry production in this valuable species. Throughout the years, many researchers have been developed in pursuit of obtaining reliable quantitative values of nutrient in blood plasma. Researchers were focus on developing the biochemical indicators to determine the sex and maturational status of fish in the absence of the availability of gonad tissues, generating the biological knowledge necessary to evaluate the impacts that a shift in sex change phenomenon. In this regard, the first clues indicating a relation between the sexual maturation and the appearance of changes in the serum profiles were obtained by experiments which is demonstrated that changes in the blood component were reflect by the administration of estrogens (MacDonald and Riddle, 1945). Non-invasive techniques based on the use of sexual steroid and /or vitellogenin (Vtg) have been reported as efficient techniques in tuna (Takemura and Oka, 1998), trout and salmon (Pottinger et al. 2005) and sturgeon (Cuisset et al. 1994). Therefore, a non-invasive sexing technique for giant grouper using both the Vtg detection in maturing females by enzyme immune assay (EIA) and the sexual steroid technique based on 17 ß-estradiol (E2) plasma levels in mature and immature individuals of giant grouper were suggest to apply in this study. Despite that, there are kit determination develop on used of immunoassay concept for detecting WSSV virus in shrimp. The shrimp virus detection kit was based on the principle of sandwich immunoassay, which is using protein in shrimp tissue. It is similar concept with the purpose experiment on development maturation kit are suggest. In fact, in development of pregnancy test kit also used the same principle of sandwich immunoassay.
Escience fund entitled of study of Induced spawning of giant grouper (Ephinephelus lanceolatus) IPP/AM/15(05-05-18-SF1007) (2009-2011) indirectly provide infomation on vitellogenin of giant grouper was identically detected only in female broodstock. This characteristic were useful as biomarker indicator or as sign on sex determination . Prelimanary works has discover molecular information on proteomic basic data of vitellogenin such as molecular weight, sequencing and amino acid profile. This prelimanary works were important for further study on development of maturation kit.
Determination vitellogenin level and development of maturation broodstock kit in giant grouper (Epinephelus lanceolatus) (06-03-06-SF0021)
Determination vitellogenin level and development of maturation broodstock kit in giant grouper (Epinephelus lanceolatus) (06-03-06-SF0021)
Page 5 of 16
Determination vitellogenin level and development of maturation broodstock kit in giant grouper (Epinephelus lanceolatus) (06-03-06-SF0021)
Determination vitellogenin level and development of maturation broodstock kit in giant grouper (Epinephelus lanceolatus) (06-03-06-SF0021)
Page 6 of 16
J
2014
J
2014
J
2013
J
2013
PROJECT SCHEDULE
J F M A M JJ A S O N D F M A M JJ A S O N D F M A M JJ A S O N D
2012
Immunohistochemistry analysis on localize of vitellogenin
Vitellogenin detection by Western Blot
Compilation & Analysis of data & report writing
Test kit validation and optimization
Induction of Vtg by using Estradiol in giant grouper
Chemical / equipment procurement
Development of polyclonal and monoclonal antibodies against vitellogenin
Purification of vitellogenin
J F M A M JJ A S O N D F M A M JJ A S O N D F M A M JJ A S O N D
Completion of vitellogenin locallize
Completion of vitellogenin detection by Western Blot
Completion of Induction of vitellogenin
Completion of purified vitellogenin
Completion of development of polyclonal antibodies
2012
Activities
Milestone
Determination vitellogenin level and development of maturation broodstock kit in giant grouper (Epinephelus lanceolatus) (06-03-06-SF0021)
Determination vitellogenin level and development of maturation broodstock kit in giant grouper (Epinephelus lanceolatus) (06-03-06-SF0021)
Page 7 of 16
Project Completion
Completion on test kit validation and optimization
Determination vitellogenin level and development of maturation broodstock kit in giant grouper (Epinephelus lanceolatus) (06-03-06-SF0021)
Determination vitellogenin level and development of maturation broodstock kit in giant grouper (Epinephelus lanceolatus) (06-03-06-SF0021)
Page 8 of 16
SUMMARY OF RELEVANT PAST RESEARCH PROJECT
A. Project title
B. Research Team
Programme head
Project leader
:(if applicable)
Name :
Institution :
C. Description of the project
D. Description how it is relevant to the proposed project
E. Other collaborator that were involved in the project
F. Source of Funding
Study on induced spawning of Giant Grouper (Epinephelus lanceolatus)
Ahmad Daud bin Om
IPP
From the previous result showed, steroid treatments (Estradiol) could be used successfully to control sex in grouper culture. Its could be quantified by using SDS PAGE on vitellogenin (Vtg). It is can be evident in serum, vitellogenin could be a good indicator to determining the reproductive status and degree of sexual maturation. Three treatments were tested using 17ß-estradiol at different dosage (500 µg/kg; 50 µg/kg and 0 µg/kg). The hormone was implanted in the captive body of the Giant Grouper (size; 31-53 kg) in a 6-months experiment. SDS-PAGE analysis revealed that 500 µg/kg of Estradiol-17ß resulted in 66% sex-reversal success, better than 50 µg/kg (33%) and control, 0 µg/kg (0%). These results supported the possibility of using Vtg as biomarkers indicators for reproductive status in giant grouper.
In previous result, showed vitellogenin (Vtg) in serum were clearly found in female and not male or immature spawner. It showed that Vtg can be use as non-invasive techniques based on the use of sexual steroid for sex determination of this species. Appearance of Vtg is correlated to oocyte development in sexually mature fish during the reproductive cycle. By using infomation on early results, we can develop a rapid, kit determination by implemeted immunoassay concept.
Kementerian Pertanian - Escience Fund
Determination vitellogenin level and development of maturation broodstock kit in giant grouper (Epinephelus lanceolatus) (06-03-06-SF0021)
Determination vitellogenin level and development of maturation broodstock kit in giant grouper (Epinephelus lanceolatus) (06-03-06-SF0021)
Page 9 of 16
RESEARCH APPROACH
A. Research methodology
B. Project activities
Activities From Date To Date
Purification of vitellogenin 01/09/2012 01/11/2012
Chemical / equipment procurement 01/06/2012 01/09/2012
Immunohistochemistry analysis on localize of vitellogenin 01/05/2013 01/08/2013
Vitellogenin detection by Western Blot 01/05/2013 01/07/2013
1. Estradiol-stimulation of giant grouper to produced vitellogenin. Hormone estradiol mix with corn oil (1:9) will inject to male giant grouper. Within 10 days, blood will collect every 2 days intervals and centrifuge for 15 min at 15,000 rpm at 4oC to obtain plasma. 2. Purification of vitellogenin. Vitellogenin in the plasma will be purified by ion-exchange using a DEAE-agarose (Bio-RAD) column equilibrated with 0.025 M Tris-HCl, pH 7.5, 0.07 M NaCl, 0.1% aprotinin. A plasma sample from an estradiol-treated giant grouper (from above step) will dilute with starting buffer and applied to 27 cm column and the column washed with 80 ml of starting buffer. The fraction will concentrate by ultra filtration and analyzed further using size exclusion chromatography and polyacrylamide gel electrophoresis. 3. Preparation of polyclonal and monoclonal antibodies against vitellogenin Purified vitellogenin (400 µg/ml) (>98% purity) will prepare above step are use in antibodies production. The 2-3 New Zealand white rabbits will inject with 50µg of purified vitellogenin in two incomplete Freunds adjuvant at 2 week intervals for 2 months or until the rabbits respond with an appropriate titter. Take test bleeds from the rabbit after each month to test for reactivity to vitellogenin by ELISA or Western blot. When the antibody titter is judged to be sufficiently high, than the rabbits will kill and the blood will allow to clot overnight at 4oC. The blood will centrifuge at 12,700X g to separate the serum and store at -80oC. Test quality of antibody by ELISA and Western blot to determine if there are any cross-reacting volume antibodies to other serum proteins. 4. Vitellogenin detection by western Blot (Validation of antibody preparation) Western Blot will give information on the degree of degradation of the sample. The best way to quantify the reaction is to use a chemi-illuminescent method. Several are now on the market and they all work well. Electroblot of sampel on PVDF membrane by using anti-Vtg antibody (polyclonal) to be test and secondary antibody-linked to alkaline phosphate (antirabit or antimouse), depending on the source of the primary antibody being used. Finally, devoleped with DAB and hydrogen peroxide . 5. Immunohistochemistry analysis on localize of Vitellogenin Vitellogenin in liver of estrogen-induced male and female giant grouper is visualized by immunohistochemical technique; detection of yolk protein in eggs served as a positif control. Localization will accomplished by using an indirect immunofluoresceance method in both frozen and paraffin-embedded tissues. By using antibody produce in above step, the technique present in this study represents a way to detect tiny amounts of Vitellogenin in the liver of fish. 6. Test kit validation and optimization Develop, test and assess the reliability of immune-based tools (using polyclonal and/or monoclonal antibodies) as diagnostic tools for detecting maturating of giant grouper in the laboratory and in field.
Specialised Equipment Description
NA New
Facility Description
N.A Existing
Infrastructure Description
Determination vitellogenin level and development of maturation broodstock kit in giant grouper (Epinephelus lanceolatus) (06-03-06-SF0021)
Determination vitellogenin level and development of maturation broodstock kit in giant grouper (Epinephelus lanceolatus) (06-03-06-SF0021)
Page 10 of 16
C. Key milestones
Milestones Date
D. Risks of the project
Determination on polyclonal and monoclonal of antibody could be little bit problem due to time consume and experience
Factor :
Technical risk :
Timing risk :
Budget risk :
Medium - Determination on vitellogenin antibody could be technically risk due to experiece.
Medium - Optimization and validation could be more longer to succes
Medium - Reagent, standard chemical and consultancy fee to third party could be subject to approval of the grant
E. Time schedule
Starting date :
Completion date :
Duration :
01/06/2012
24
Induction of Vtg by using Estradiol in giant grouper 01/07/2012 01/09/2012
Development of polyclonal and monoclonal antibodies against vitellogenin 01/11/2012 01/04/2013
Test kit validation and optimization 01/06/2013 01/04/2014
Compilation & Analysis of data & report writing 01/04/2014 01/05/2014
Completion of vitellogenin locallize 01/09/2013
Completion on test kit validation and optimization 01/04/2014
Project Completion 01/05/2014
Completion of vitellogenin detection by Western Blot 01/07/2013
Completion of Induction of vitellogenin 01/09/2012
Completion of purified vitellogenin 01/11/2012
Completion of development of polyclonal antibodies 01/04/2013
01/05/2014
Determination vitellogenin level and development of maturation broodstock kit in giant grouper (Epinephelus lanceolatus) (06-03-06-SF0021)
Determination vitellogenin level and development of maturation broodstock kit in giant grouper (Epinephelus lanceolatus) (06-03-06-SF0021)
Page 11 of 16
BENEFITS OF THE PROJECT
A. Outputs Expected from the project
Research Quantity Details\Remark
New/improved material Determination kit of Giant Grouper maturation which is applicable for hatcery operator
Human capital and expert development
Quantity Specialisation Area (specific area)
1 Fish reproductiveDoctorate degree
B. Economic contributions of the project
Revenue from consultancies
Time savings
Sales of manufactured product/ device/ equipment
Royalties from licensing
C. Infrastuctural contributions of the project
New equipment
Determination vitellogenin level and development of maturation broodstock kit in giant grouper (Epinephelus lanceolatus) (06-03-06-SF0021)
Determination vitellogenin level and development of maturation broodstock kit in giant grouper (Epinephelus lanceolatus) (06-03-06-SF0021)
Page 12 of 16
RESEARCH COLLABORATION
A. Institutions involved in the project
Organisations Involved Role
UMT - Universiti Malaysia Terengganu
Validation and optimize kit
IPP - Institut Penyelidikan Perikanan Immunohistochemistry analysis on localize of vitel
B. Industries involved in the project
Industry Role
Laboratory work Optimization and validation kit
C. Project Team
Project Leader Organisation Man-Month
AHMAD DAUD BIN OM Institut Penyelidikan Perikanan 280.00
Kua Beng Chu Institut Penyelidikan Perikanan 280.00
Yeong Yik Sung Universiti Malaysia Terengganu 300.00
Safiah Jasmani Universiti Malaysia Terengganu 300.00
Researchers Organisation Man-Month
Support Staff Type Number Man-Month
RA 2 75.00
Contract Staff Type Number Man-Month
Contract Staff 1 50.00
Other
Determination vitellogenin level and development of maturation broodstock kit in giant grouper (Epinephelus lanceolatus) (06-03-06-SF0021)
Determination vitellogenin level and development of maturation broodstock kit in giant grouper (Epinephelus lanceolatus) (06-03-06-SF0021)
Page 13 of 16
DIRECT EXPENSES ESTIMATION WORKSHEET
Expense Categories and Items Year 1 Year 2 Year 3 Year 4 Total
Temporary and contract personnel (V 11000)
Travel & transportation (V 21000)
Rental (V 24000)
Research materials & supplies (V 26000)
Minor modifications & repairs (V 28000)
Special services (V 29000)
Special equiment, accessories (V 35000)
Total direct expenses
CONTRACT STAFFS 10,000 5,000 0 0 15,000
Workshop 0 2,500 0 0 2,500
NA 0 0 0 0
International Conferences 0 10,000 0 0 10,000
Local seminar 0 5,000 0 0 5,000
NA 0 0 0 0
Chemical, Reagent, standard etc 50,000 50,000 0 0 100,000
Disposble item (Vials, glove, needle etc) 15,000 15,000 0 0 30,000
NA 0 0 0 0
NA 0 0 0 0
Development Kit validation and optimization 25,000 45,000 0 0 70,000
NA 0 0 0 0
100,000 132,500 232,500
NA NA N
Item Justification Similar Equipment available
Justification to purchase Estimation Cost
SPECIAL EQUIPMENT AND ACCESSORIES
Determination vitellogenin level and development of maturation broodstock kit in giant grouper (Epinephelus lanceolatus) (06-03-06-SF0021)
Determination vitellogenin level and development of maturation broodstock kit in giant grouper (Epinephelus lanceolatus) (06-03-06-SF0021)
Page 14 of 16
PROJECT COST
A. Salaried Personnel costs
B. Direct Project Expenses
Expense Category
2012 2013 2014 2015
Total (RM)
Year 1 (RM) Year 2 (RM) Year 3 (RM) Year 4 (RM)
00000Minor modifications and repairs (V28000)
70,0000045,00025,000Special services (V29000)
00000Special equipment and accessories (V35000)
130,0000065,00065,000Research materials and supplies (V26000)
15,000005,00010,000Temporary and contract personnel (V11000)
17,5000017,5000Travel and transportation (V21000)
00000Rentals (V24000)
Staff Category
2012 2013 2014 2015
Total (RM)
Year 1 (RM) Year 2 (RM) Year 3 (RM) Year 4 (RM)
Salaried personnel (V111000)
61,150 75,000 136,150
Total salaried 61,150 75,000 136,150
Total direct 100,000 132,500 0 0 232,500
C. Total project cost
2012 2013 2014 2015
Year 1 (RM) Year 2 (RM) Year 3 (RM) Year 4 (RM) Total (RM)
161,150 207,500 0 0 368,650
Determination vitellogenin level and development of maturation broodstock kit in giant grouper (Epinephelus lanceolatus) (06-03-06-SF0021)
Determination vitellogenin level and development of maturation broodstock kit in giant grouper (Epinephelus lanceolatus) (06-03-06-SF0021)
Page 15 of 16
Summary of Project Funding
A. Funding Sources
Funding Sources RM % of Total Funding
Science Fund 232,500
Internal Fund 136,150
0
368,650
Other Sources
Total Funding
63.07 %
36.93 %
0.00 %
100 %
B. Disbursement schedule for ScienceFund, by participating research organisation
Organisation Year 1 (RM) Year 2 (RM) Year 3 (RM) Year4 (RM) Total (RM)
2012 2013 2014 2015
Institut Penyelidikan Perikanan 100,000 132,500 0 0 232,500
Total ScienceFund 100,000 132,500 0 0 232,500
Determination vitellogenin level and development of maturation broodstock kit in giant grouper (Epinephelus lanceolatus) (06-03-06-SF0021)
Determination vitellogenin level and development of maturation broodstock kit in giant grouper (Epinephelus lanceolatus) (06-03-06-SF0021)
Page 16 of 16
CONTRACTUAL MATTERS
A. Contractual obligations under this project
B. Ownership of intellectual property rights
none
IPP Institut Penyelidikan Perikanan-