Alpers, Svetlana, La creatividad encarnada: el Sileno borracho (cap)
Making an epidemic curve (epicurve) Preben Aavitsland (with a lot of help from Katarina Alpers, RKI)
-
Upload
melanie-cook -
Category
Documents
-
view
214 -
download
1
Transcript of Making an epidemic curve (epicurve) Preben Aavitsland (with a lot of help from Katarina Alpers, RKI)
Making an epidemic curve (epicurve)
Preben Aavitsland(with a lot of help from Katarina Alpers, RKI)
The epidemic curve
• Time components of an outbreak• Shows
– Start – End – Duration – Peak– Outliers
• Helps to form hypotheses on– Route of transmission– Probable exposure period– Incubation time
The epidemic curve
Figure 1. Reported cases of campylobacteriosis (n=45) in Svolvær, Norway, by
date of onset J anuary and February 1997.
10 = 1 primary case
= 1 secondary household case
5
22 23 24 25 26 27 28 29 30 31 1 2 3 4 5 6 7 8 9 10
J anuary February
The epidemic curve
• Histogram– Area proportional to number
– No space between columns
– One population
• X-axis = time– Start before epidemic, continue after
– Interval < 1/4 of incubation period
• Y-axis = number of cases– Usually one square = one case
• Easy to make in Excel
Point source
0
5
10
15
20
No of cases
Time
Duration ~ Incubation time
Continous source
Mean IP
0
5
10
15
20
1 4 7 10 13 16 19 22 25 28 31 34 37
No of cases
Weeks
Intermittent sourceNo of cases
Time (days)
0
1
2
3
4
5
6
7
8
9
10
1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22
Human to human transmission
0
5
10
Zeit
No of cases
Generation
time
1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22
Probable exposure time
0
5
10
15
Time
1 Median onset time
23
50% 50%Probable exposure time
Median incubation time (Intervall between first and last disease onset)
No of cases
1 2 3 4 5 6 7 8 9 1011 12 1314 1516 171819 20 21 22
Probable exposure period
1 3 5 7 9 11 13 15 17 19 21 23 25 27 29 31 TimeProbable exposure period
minimum incubation time
maximum incubation time
No of cases
1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22
Two ways of making epicurves in Excel
• The ”square method”– Turn a work sheet in to squares
– Fill in each patient as a square
• The ”chart method”– Make a table of onset times
– Use the chart wizard
– Make a histogram (by removing intervals between bars in a bar chart)