Linguistic and genetic diversity - DDL · Genetic flow for L3e (13% in Siwan and 3% in Beni...
Transcript of Linguistic and genetic diversity - DDL · Genetic flow for L3e (13% in Siwan and 3% in Beni...
![Page 1: Linguistic and genetic diversity - DDL · Genetic flow for L3e (13% in Siwan and 3% in Beni Snassen) : migration waves from the Horn of Africa ? L1, marker of West and Central Africa,](https://reader033.fdocuments.net/reader033/viewer/2022053122/60aabf4bf0cfbc78085aa204/html5/thumbnails/1.jpg)
2005 - Aussois
The BerbersLinguistic and genetic diversity
J.-M. DUGOUJON and G. PHILIPPSON
UMR 8555 CNRS ToulouseUMR 5596 CNRS Lyon
![Page 2: Linguistic and genetic diversity - DDL · Genetic flow for L3e (13% in Siwan and 3% in Beni Snassen) : migration waves from the Horn of Africa ? L1, marker of West and Central Africa,](https://reader033.fdocuments.net/reader033/viewer/2022053122/60aabf4bf0cfbc78085aa204/html5/thumbnails/2.jpg)
![Page 3: Linguistic and genetic diversity - DDL · Genetic flow for L3e (13% in Siwan and 3% in Beni Snassen) : migration waves from the Horn of Africa ? L1, marker of West and Central Africa,](https://reader033.fdocuments.net/reader033/viewer/2022053122/60aabf4bf0cfbc78085aa204/html5/thumbnails/3.jpg)
![Page 4: Linguistic and genetic diversity - DDL · Genetic flow for L3e (13% in Siwan and 3% in Beni Snassen) : migration waves from the Horn of Africa ? L1, marker of West and Central Africa,](https://reader033.fdocuments.net/reader033/viewer/2022053122/60aabf4bf0cfbc78085aa204/html5/thumbnails/4.jpg)
The Berber ‘world’
![Page 5: Linguistic and genetic diversity - DDL · Genetic flow for L3e (13% in Siwan and 3% in Beni Snassen) : migration waves from the Horn of Africa ? L1, marker of West and Central Africa,](https://reader033.fdocuments.net/reader033/viewer/2022053122/60aabf4bf0cfbc78085aa204/html5/thumbnails/5.jpg)
2005 2005 –– AussoisAussois
Linguistic approach
The Berber language and its place in Afro-Asiatic
Sub-Classification
Characteristics of Siwi
The case of Tuareg
Berber and Afro-Asiatic
![Page 6: Linguistic and genetic diversity - DDL · Genetic flow for L3e (13% in Siwan and 3% in Beni Snassen) : migration waves from the Horn of Africa ? L1, marker of West and Central Africa,](https://reader033.fdocuments.net/reader033/viewer/2022053122/60aabf4bf0cfbc78085aa204/html5/thumbnails/6.jpg)
2005 2005 –– AussoisAussois
The genetic markers
Gm and Km immunoglobulin allotypes
Mitochondrial DNA (mtDNA): haplogroups and sub-haplogroups
Y chromosome haplotypes
![Page 7: Linguistic and genetic diversity - DDL · Genetic flow for L3e (13% in Siwan and 3% in Beni Snassen) : migration waves from the Horn of Africa ? L1, marker of West and Central Africa,](https://reader033.fdocuments.net/reader033/viewer/2022053122/60aabf4bf0cfbc78085aa204/html5/thumbnails/7.jpg)
2005 2005 –– AussoisAussois
Gm and Kmimmunoglobulin allotypes
![Page 8: Linguistic and genetic diversity - DDL · Genetic flow for L3e (13% in Siwan and 3% in Beni Snassen) : migration waves from the Horn of Africa ? L1, marker of West and Central Africa,](https://reader033.fdocuments.net/reader033/viewer/2022053122/60aabf4bf0cfbc78085aa204/html5/thumbnails/8.jpg)
2005 2005 –– AussoisAussois
The populations
![Page 9: Linguistic and genetic diversity - DDL · Genetic flow for L3e (13% in Siwan and 3% in Beni Snassen) : migration waves from the Horn of Africa ? L1, marker of West and Central Africa,](https://reader033.fdocuments.net/reader033/viewer/2022053122/60aabf4bf0cfbc78085aa204/html5/thumbnails/9.jpg)
2005 2005 –– AussoisAussois
Multidimensional Scaling
![Page 10: Linguistic and genetic diversity - DDL · Genetic flow for L3e (13% in Siwan and 3% in Beni Snassen) : migration waves from the Horn of Africa ? L1, marker of West and Central Africa,](https://reader033.fdocuments.net/reader033/viewer/2022053122/60aabf4bf0cfbc78085aa204/html5/thumbnails/10.jpg)
2005 2005 –– AussoisAussois
Principal Component Analysis: 1st axis (85%)
![Page 11: Linguistic and genetic diversity - DDL · Genetic flow for L3e (13% in Siwan and 3% in Beni Snassen) : migration waves from the Horn of Africa ? L1, marker of West and Central Africa,](https://reader033.fdocuments.net/reader033/viewer/2022053122/60aabf4bf0cfbc78085aa204/html5/thumbnails/11.jpg)
2005 2005 –– AussoisAussois
Gradient of Gm haploptypic frequencies
Gm*3;23;5*
Gm*3;..;5*
![Page 12: Linguistic and genetic diversity - DDL · Genetic flow for L3e (13% in Siwan and 3% in Beni Snassen) : migration waves from the Horn of Africa ? L1, marker of West and Central Africa,](https://reader033.fdocuments.net/reader033/viewer/2022053122/60aabf4bf0cfbc78085aa204/html5/thumbnails/12.jpg)
2005 2005 –– AussoisAussois
Gradient of Gm haploptypic frequencies
Gm*1,17;..;5*
Gm*1,17;..;5*,28
Gm*1,17;..;10,11,13,15,+28
Gm*1,17;..;5,6,10,11,14,+28
Gm*1,17;..;5,6,24,+28
![Page 13: Linguistic and genetic diversity - DDL · Genetic flow for L3e (13% in Siwan and 3% in Beni Snassen) : migration waves from the Horn of Africa ? L1, marker of West and Central Africa,](https://reader033.fdocuments.net/reader033/viewer/2022053122/60aabf4bf0cfbc78085aa204/html5/thumbnails/13.jpg)
2005 2005 –– AussoisAussois
Gradient of Gm haploptypic frequencies
Gm*1,17;..;10,11,13,15,16
Gm*1,3;+23;5*
![Page 14: Linguistic and genetic diversity - DDL · Genetic flow for L3e (13% in Siwan and 3% in Beni Snassen) : migration waves from the Horn of Africa ? L1, marker of West and Central Africa,](https://reader033.fdocuments.net/reader033/viewer/2022053122/60aabf4bf0cfbc78085aa204/html5/thumbnails/14.jpg)
2005 2005 –– AussoisAussois
Gradient of Gm haploptypic frequencies
Gm*1,17;..;10,11,13,15,+28 Gm*1,17;..;5*
![Page 15: Linguistic and genetic diversity - DDL · Genetic flow for L3e (13% in Siwan and 3% in Beni Snassen) : migration waves from the Horn of Africa ? L1, marker of West and Central Africa,](https://reader033.fdocuments.net/reader033/viewer/2022053122/60aabf4bf0cfbc78085aa204/html5/thumbnails/15.jpg)
2005 2005 –– AussoisAussois
Minimal Spanning tree: genetic distances (12 Gm haplotypes)
![Page 16: Linguistic and genetic diversity - DDL · Genetic flow for L3e (13% in Siwan and 3% in Beni Snassen) : migration waves from the Horn of Africa ? L1, marker of West and Central Africa,](https://reader033.fdocuments.net/reader033/viewer/2022053122/60aabf4bf0cfbc78085aa204/html5/thumbnails/16.jpg)
2005 2005 –– AussoisAussois
Gm allotypes
Homogeneity of the Northern African Berber (and Arab) populations :
~ 20 % of the sub-Saharan haplotypes in all the populations
80 % of the Gm haplotypes frequency in common with Europeans and West Eurasians
IsseqquamarenTuaregs (Algeria) are different from KelNam Tuaregs (Niger)
Siwan, with more than 50 % of sub-Saharan haplotypes are related to Semitic and Couchitic populations (owingto the caravans, as well as the slave market ?)
![Page 17: Linguistic and genetic diversity - DDL · Genetic flow for L3e (13% in Siwan and 3% in Beni Snassen) : migration waves from the Horn of Africa ? L1, marker of West and Central Africa,](https://reader033.fdocuments.net/reader033/viewer/2022053122/60aabf4bf0cfbc78085aa204/html5/thumbnails/17.jpg)
2005 2005 –– AussoisAussois
Gm allotypes
Clear differentiation of Northern and Eastern Berbers
If the South-North genetic gradient is marked on bothsides from Sahara, the same is not true for East-Westgradient
![Page 18: Linguistic and genetic diversity - DDL · Genetic flow for L3e (13% in Siwan and 3% in Beni Snassen) : migration waves from the Horn of Africa ? L1, marker of West and Central Africa,](https://reader033.fdocuments.net/reader033/viewer/2022053122/60aabf4bf0cfbc78085aa204/html5/thumbnails/18.jpg)
2005 2005 –– AussoisAussois
Mitochondrial DNA (mtDNA):
![Page 19: Linguistic and genetic diversity - DDL · Genetic flow for L3e (13% in Siwan and 3% in Beni Snassen) : migration waves from the Horn of Africa ? L1, marker of West and Central Africa,](https://reader033.fdocuments.net/reader033/viewer/2022053122/60aabf4bf0cfbc78085aa204/html5/thumbnails/19.jpg)
L0 L1b L1eL2a
L2b
L3e
L4g
U6 total
M1
U3
U5b
K
HV1
(preHV)1
H
pre*V1
V
J2
T total X W
L0
L1b
L1eL2a
L2b
L3e
L4g
U6 total
M1
N1bU2bU2eU3U4U5b
K
HV1
(preHV)1
H
pre*V1
V
J2
T total
X
W
L0
L1bL1e
L2aL2b
L3e
L4g
U6 total
M1
N1b
U2b
U2e
U3
U4
U5bK
HV1
(preHV)1
H
pre*V1
V
J2
T total
X W
![Page 20: Linguistic and genetic diversity - DDL · Genetic flow for L3e (13% in Siwan and 3% in Beni Snassen) : migration waves from the Horn of Africa ? L1, marker of West and Central Africa,](https://reader033.fdocuments.net/reader033/viewer/2022053122/60aabf4bf0cfbc78085aa204/html5/thumbnails/20.jpg)
2005 2005 –– AussoisAussois
Mitochondrial DNA
sub-Saharan North African European
and West Eurasian
Moroccan Berbers
Asni (Rhiraya) 22,6 11,3 66,1
Bouhria (Beni Snassen) 13,9 2,8 83,3
Algerian Berbers
Ghardaia (Mozabite) 14 28,2 57,8
Egyptian Berbers
Siwa 24 0 76
![Page 21: Linguistic and genetic diversity - DDL · Genetic flow for L3e (13% in Siwan and 3% in Beni Snassen) : migration waves from the Horn of Africa ? L1, marker of West and Central Africa,](https://reader033.fdocuments.net/reader033/viewer/2022053122/60aabf4bf0cfbc78085aa204/html5/thumbnails/21.jpg)
2005 2005 –– AussoisAussois
Distribution of the H1 and H3 sub-haplogroups frequencies
![Page 22: Linguistic and genetic diversity - DDL · Genetic flow for L3e (13% in Siwan and 3% in Beni Snassen) : migration waves from the Horn of Africa ? L1, marker of West and Central Africa,](https://reader033.fdocuments.net/reader033/viewer/2022053122/60aabf4bf0cfbc78085aa204/html5/thumbnails/22.jpg)
2005 2005 –– AussoisAussois
Mitochondrial DNA
H1 and H3 subhaplogroups (coalescence ages ~ 11,000) are the markers of late-glacial expansions ofhunter-gatherers from the Franco-Cantabrian refuge, after the « Last Glacial Maximum », about 20,000 years ago
H1 displays a high frequency among North Africanpopulations (10 to 20 %), with a maximum in Berberpopulations
Only 1 % frequency in Siwa
![Page 23: Linguistic and genetic diversity - DDL · Genetic flow for L3e (13% in Siwan and 3% in Beni Snassen) : migration waves from the Horn of Africa ? L1, marker of West and Central Africa,](https://reader033.fdocuments.net/reader033/viewer/2022053122/60aabf4bf0cfbc78085aa204/html5/thumbnails/23.jpg)
2005 2005 –– AussoisAussois
Mitochondrial DNA
L haplogroups:
Genetic flow for L3e (13% in Siwan and 3% in Beni Snassen) : migration waves from the Horn of Africa ?
L1, marker of West and Central Africa, is more frequentin Northern African Berber populations (7-9%) than in Siwa (1%)
L4g, marker of East Africans, is only found in Siwa (4 %)
![Page 24: Linguistic and genetic diversity - DDL · Genetic flow for L3e (13% in Siwan and 3% in Beni Snassen) : migration waves from the Horn of Africa ? L1, marker of West and Central Africa,](https://reader033.fdocuments.net/reader033/viewer/2022053122/60aabf4bf0cfbc78085aa204/html5/thumbnails/24.jpg)
2005 2005 –– AussoisAussois
Mitochondrial DNA
M1 haplogroup
17% at Siwa and 4% at Bouhria (Beni Snassen) and Asni (Rhiraya)
M1 distribution correlates with the spread ofAfro-Asiatic languages (?)
![Page 25: Linguistic and genetic diversity - DDL · Genetic flow for L3e (13% in Siwan and 3% in Beni Snassen) : migration waves from the Horn of Africa ? L1, marker of West and Central Africa,](https://reader033.fdocuments.net/reader033/viewer/2022053122/60aabf4bf0cfbc78085aa204/html5/thumbnails/25.jpg)
2005 2005 –– AussoisAussois
Y chromosome haplotypes
![Page 26: Linguistic and genetic diversity - DDL · Genetic flow for L3e (13% in Siwan and 3% in Beni Snassen) : migration waves from the Horn of Africa ? L1, marker of West and Central Africa,](https://reader033.fdocuments.net/reader033/viewer/2022053122/60aabf4bf0cfbc78085aa204/html5/thumbnails/26.jpg)
2005 2005 –– AussoisAussois
Y chromosome haplotypes
Sample tested: Beni Snassen (67), Rhiraya (54) and Siwi (93)
Markers: > 70 biallelic markers (including some new unpublished)
11 microsatellites
20 distinct binary haplogroups
![Page 27: Linguistic and genetic diversity - DDL · Genetic flow for L3e (13% in Siwan and 3% in Beni Snassen) : migration waves from the Horn of Africa ? L1, marker of West and Central Africa,](https://reader033.fdocuments.net/reader033/viewer/2022053122/60aabf4bf0cfbc78085aa204/html5/thumbnails/27.jpg)
2005 2005 –– AussoisAussois
Y chromosome haplotypes
Close relationship between the two Moroccan Berberpopulations (78-80% E-M81)
E-M81 was found in only one Siwi (1%)
Very low frequency (2-6%) of haplogroups of Europeandescent (such as R-M269, J-M12 and E-M78 cluster α) in allthe berber populations
Relatively low frequency (2-14%) of haplogroupscommonly found in the Middle East (J-M267 and G-M201)
![Page 28: Linguistic and genetic diversity - DDL · Genetic flow for L3e (13% in Siwan and 3% in Beni Snassen) : migration waves from the Horn of Africa ? L1, marker of West and Central Africa,](https://reader033.fdocuments.net/reader033/viewer/2022053122/60aabf4bf0cfbc78085aa204/html5/thumbnails/28.jpg)
2005 2005 –– AussoisAussois
Y chromosome haplotypes
Beni Snassen and Rhiraya Berbers from Morocco show
relatively low amount of sub-Saharan Y chromosomes, almost
exclusively E-DYS271 (7%)
Siwa Berbers have a similar frequency (6%) of this
haplogroup, but other sub-Saharan haplogroups (e.g. B-M109
and E-V6) have been observed at high frequencies: about 60% on the whole (these haplogroups are very rare north of the
Sahara)
![Page 29: Linguistic and genetic diversity - DDL · Genetic flow for L3e (13% in Siwan and 3% in Beni Snassen) : migration waves from the Horn of Africa ? L1, marker of West and Central Africa,](https://reader033.fdocuments.net/reader033/viewer/2022053122/60aabf4bf0cfbc78085aa204/html5/thumbnails/29.jpg)
2005 2005 –– AussoisAussois
Y chromosome haplogroups
0.000.100.200.300.400.500.600.700.800.90
Rhiraya Beni-Snassen
Siwa
Berber populations
Freq
uenc
ies Autochthonous
sub-SaharanMiddle easternEuropeannot assigned
Berbers from the North West and North Eastare genetically quite distinct
![Page 30: Linguistic and genetic diversity - DDL · Genetic flow for L3e (13% in Siwan and 3% in Beni Snassen) : migration waves from the Horn of Africa ? L1, marker of West and Central Africa,](https://reader033.fdocuments.net/reader033/viewer/2022053122/60aabf4bf0cfbc78085aa204/html5/thumbnails/30.jpg)
2005 2005 –– AussoisAussois
Y chromosome haplotypes
Relative high microsatellite diversity in Siwa Berbers suggests that their presence cannot beascribed to recent bottleneck or recent foundereffect
Sub-Saharan gene flow(s) reflect(s) ancientinteractions, before Sahara became dry ?
![Page 31: Linguistic and genetic diversity - DDL · Genetic flow for L3e (13% in Siwan and 3% in Beni Snassen) : migration waves from the Horn of Africa ? L1, marker of West and Central Africa,](https://reader033.fdocuments.net/reader033/viewer/2022053122/60aabf4bf0cfbc78085aa204/html5/thumbnails/31.jpg)
2005 2005 –– AussoisAussois
Y chromosome haplotypes
Y haplogroup sharing between Berbers andMiddle East – Eastern Africa is very limited
East-African or Middle Eastern origin of theberber ? Y data doesn’t permit to answer thesequestions
![Page 32: Linguistic and genetic diversity - DDL · Genetic flow for L3e (13% in Siwan and 3% in Beni Snassen) : migration waves from the Horn of Africa ? L1, marker of West and Central Africa,](https://reader033.fdocuments.net/reader033/viewer/2022053122/60aabf4bf0cfbc78085aa204/html5/thumbnails/32.jpg)
2005 2005 –– AussoisAussois
Pastoralism and lactase genetics
In Europe, the putatively causal allele (-13910T) for lactase tolerance has a frequency of ~ 85 %
In sub-Saharan Africa, this frequency is 0 %
In Berbers from North West : 25 %
The distribution of the other haplotypes P,X and Y shows that migrations from the Sahara were limited
![Page 33: Linguistic and genetic diversity - DDL · Genetic flow for L3e (13% in Siwan and 3% in Beni Snassen) : migration waves from the Horn of Africa ? L1, marker of West and Central Africa,](https://reader033.fdocuments.net/reader033/viewer/2022053122/60aabf4bf0cfbc78085aa204/html5/thumbnails/33.jpg)
2005 2005 –– AussoisAussois
Pastoralism and lactase genetics
The positive selection pressure on lactase suggests that contemporary Berber populations possess the genetic signature of past migration of pastoralists from the Middle East (Neolithictransition)
![Page 34: Linguistic and genetic diversity - DDL · Genetic flow for L3e (13% in Siwan and 3% in Beni Snassen) : migration waves from the Horn of Africa ? L1, marker of West and Central Africa,](https://reader033.fdocuments.net/reader033/viewer/2022053122/60aabf4bf0cfbc78085aa204/html5/thumbnails/34.jpg)
2005 2005 –– AussoisAussois
Perspectives
Mali (area of Tombouctou): linguistic and geneticinvestigation in progress on Tuareg
Siwa (hypothesis of a « Zenati » peopling)Investigation in Figuig oasis (Morocco-Algeriaborder)
Other Libyan Desert oasis: Augila ?
Afro-Asiatic and Berber origins: M1 mtDNAhaplotype evolution
![Page 35: Linguistic and genetic diversity - DDL · Genetic flow for L3e (13% in Siwan and 3% in Beni Snassen) : migration waves from the Horn of Africa ? L1, marker of West and Central Africa,](https://reader033.fdocuments.net/reader033/viewer/2022053122/60aabf4bf0cfbc78085aa204/html5/thumbnails/35.jpg)
2005 2005 –– AussoisAussois
Cartes de similarité génétique
![Page 36: Linguistic and genetic diversity - DDL · Genetic flow for L3e (13% in Siwan and 3% in Beni Snassen) : migration waves from the Horn of Africa ? L1, marker of West and Central Africa,](https://reader033.fdocuments.net/reader033/viewer/2022053122/60aabf4bf0cfbc78085aa204/html5/thumbnails/36.jpg)
2005 - Aussois
FinancementsFinancements
CNRS: Programme OHLL et OMLL (EUROCORES – ESF)
Conseil Régional Midi-Pyrénées