Latin Square Designs. Selected Latin Squares 3 x 34 x 4 A B CA B C DA B C DA B C DA B C D B C AB A D...

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Latin Square Designs

Transcript of Latin Square Designs. Selected Latin Squares 3 x 34 x 4 A B CA B C DA B C DA B C DA B C D B C AB A D...

Page 1: Latin Square Designs. Selected Latin Squares 3 x 34 x 4 A B CA B C DA B C DA B C DA B C D B C AB A D CB C D AB D A CB A D C C A BC D B AC D A BC A D BC.

Latin Square Designs

Page 2: Latin Square Designs. Selected Latin Squares 3 x 34 x 4 A B CA B C DA B C DA B C DA B C D B C AB A D CB C D AB D A CB A D C C A BC D B AC D A BC A D BC.

Latin Square Designs Selected Latin Squares

3 x 3 4 x 4A B C A B C D A B C D A B C D A B C DB C A B A D C B C D A B D A C B A D CC A B C D B A C D A B C A D B C D A B

D C A B D A B C D C B A D C B A 

5 x 5 6 x 6A B C D E A B C D E FB A E C D B F D C A EC D A E B C D E F B AD E B A C D A F E C BE C D B A E C A B F D

F E B A D C

Page 3: Latin Square Designs. Selected Latin Squares 3 x 34 x 4 A B CA B C DA B C DA B C DA B C D B C AB A D CB C D AB D A CB A D C C A BC D B AC D A BC A D BC.

A Latin Square

Page 4: Latin Square Designs. Selected Latin Squares 3 x 34 x 4 A B CA B C DA B C DA B C DA B C D B C AB A D CB C D AB D A CB A D C C A BC D B AC D A BC A D BC.

Definition

• A Latin square is a square array of objects (letters A, B, C, …) such that each object appears once and only once in each row and each column. Example - 4 x 4 Latin Square.

A B C DB C D AC D A BD A B C

 

Page 5: Latin Square Designs. Selected Latin Squares 3 x 34 x 4 A B CA B C DA B C DA B C DA B C D B C AB A D CB C D AB D A CB A D C C A BC D B AC D A BC A D BC.

In a Latin square You have three factors:

• Treatments (t) (letters A, B, C, …)

• Rows (t)

• Columns (t)

The number of treatments = the number of rows = the number of colums = t.The row-column treatments are represented by cells in a t x t array.The treatments are assigned to row-column combinations using a Latin-square arrangement

 

Page 6: Latin Square Designs. Selected Latin Squares 3 x 34 x 4 A B CA B C DA B C DA B C DA B C D B C AB A D CB C D AB D A CB A D C C A BC D B AC D A BC A D BC.

Example

A courier company is interested in deciding between five brands (D,P,F,C and R) of car for its next purchase of fleet cars.

• The brands are all comparable in purchase price. • The company wants to carry out a study that will

enable them to compare the brands with respect to operating costs.

• For this purpose they select five drivers (Rows). • In addition the study will be carried out over a

five week period (Columns = weeks).

Page 7: Latin Square Designs. Selected Latin Squares 3 x 34 x 4 A B CA B C DA B C DA B C DA B C D B C AB A D CB C D AB D A CB A D C C A BC D B AC D A BC A D BC.

• Each week a driver is assigned to a car using randomization and a Latin Square Design.

• The average cost per mile is recorded at the end of each week and is tabulated below:

Week 1 2 3 4 5 1 5.83 6.22 7.67 9.43 6.57 D P F C R 2 4.80 7.56 10.34 5.82 9.86 P D C R F

Drivers 3 7.43 11.29 7.01 10.48 9.27 F C R D P 4 6.60 9.54 11.11 10.84 15.05 R F D P C 5 11.24 6.34 11.30 12.58 16.04 C R P F D

Page 8: Latin Square Designs. Selected Latin Squares 3 x 34 x 4 A B CA B C DA B C DA B C DA B C D B C AB A D CB C D AB D A CB A D C C A BC D B AC D A BC A D BC.

The Model for a Latin Experiment

kijjikkijy

i = 1,2,…, t j = 1,2,…, t

yij(k) = the observation in ith row and the jth column receiving the kth treatment

= overall mean

k = the effect of the ith treatmenti = the effect of the ith row

ij(k) = random error

k = 1,2,…, t

j = the effect of the jth column

No interaction between rows, columns and treatments

Page 9: Latin Square Designs. Selected Latin Squares 3 x 34 x 4 A B CA B C DA B C DA B C DA B C D B C AB A D CB C D AB D A CB A D C C A BC D B AC D A BC A D BC.

• A Latin Square experiment is assumed to be a three-factor experiment.

• The factors are rows, columns and treatments.

• It is assumed that there is no interaction between rows, columns and treatments.

• The degrees of freedom for the interactions is used to estimate error.

Page 10: Latin Square Designs. Selected Latin Squares 3 x 34 x 4 A B CA B C DA B C DA B C DA B C D B C AB A D CB C D AB D A CB A D C C A BC D B AC D A BC A D BC.

The Anova Table for a Latin Square Experiment

Source S.S. d.f. M.S. F p-value

Treat SSTr t-1 MSTr MSTr /MSE

Rows SSRow t-1 MSRow MSRow /MSE

Cols SSCol t-1 MSCol MSCol /MSE

Error SSE (t-1)(t-2) MSE

Total SST t2 - 1

Page 11: Latin Square Designs. Selected Latin Squares 3 x 34 x 4 A B CA B C DA B C DA B C DA B C D B C AB A D CB C D AB D A CB A D C C A BC D B AC D A BC A D BC.

The Anova Table for Example

Source S.S. d.f. M.S. F p-value

Week 51.17887 4 12.79472 16.06 0.0001

Driver 69.44663 4 17.36166 21.79 0.0000

Car 70.90402 4 17.72601 22.24 0.0000

Error 9.56315 12 0.79693

Total 201.09267 24

Page 12: Latin Square Designs. Selected Latin Squares 3 x 34 x 4 A B CA B C DA B C DA B C DA B C D B C AB A D CB C D AB D A CB A D C C A BC D B AC D A BC A D BC.

Using SPSS for a Latin Square experiment

Rows Cols Trts Y

Page 13: Latin Square Designs. Selected Latin Squares 3 x 34 x 4 A B CA B C DA B C DA B C DA B C D B C AB A D CB C D AB D A CB A D C C A BC D B AC D A BC A D BC.

Select Analyze->General Linear Model->Univariate

Page 14: Latin Square Designs. Selected Latin Squares 3 x 34 x 4 A B CA B C DA B C DA B C DA B C D B C AB A D CB C D AB D A CB A D C C A BC D B AC D A BC A D BC.

Select the dependent variable and the three factors – Rows, Cols, Treats

Select Model

Page 15: Latin Square Designs. Selected Latin Squares 3 x 34 x 4 A B CA B C DA B C DA B C DA B C D B C AB A D CB C D AB D A CB A D C C A BC D B AC D A BC A D BC.

Identify a model that has only main effects for Rows, Cols, Treats

Page 16: Latin Square Designs. Selected Latin Squares 3 x 34 x 4 A B CA B C DA B C DA B C DA B C D B C AB A D CB C D AB D A CB A D C C A BC D B AC D A BC A D BC.

Tests of Between-Subjects Effects

Dependent Variable: COST

191.530a 12 15.961 20.028 .000

2120.050 1 2120.050 2660.273 .000

69.447 4 17.362 21.786 .000

51.179 4 12.795 16.055 .000

70.904 4 17.726 22.243 .000

9.563 12 .797

2321.143 25

201.093 24

SourceCorrected Model

Intercept

DRIVER

WEEK

CAR

Error

Total

Corrected Total

Type IIISum of

Squares dfMean

Square F Sig.

R Squared = .952 (Adjusted R Squared = .905)a.

The ANOVA table produced by SPSS

Page 17: Latin Square Designs. Selected Latin Squares 3 x 34 x 4 A B CA B C DA B C DA B C DA B C D B C AB A D CB C D AB D A CB A D C C A BC D B AC D A BC A D BC.

Example 2

In this Experiment the we are again interested in how weight gain (Y) in rats is affected by Source of protein (Beef, Cereal, and Pork) and by Level of Protein (High or Low).

There are a total of t = 3 X 2 = 6 treatment combinations of the two factors.

• Beef -High Protein• Cereal-High Protein• Pork-High Protein• Beef -Low Protein• Cereal-Low Protein and • Pork-Low Protein

Page 18: Latin Square Designs. Selected Latin Squares 3 x 34 x 4 A B CA B C DA B C DA B C DA B C D B C AB A D CB C D AB D A CB A D C C A BC D B AC D A BC A D BC.

In this example we will consider using a Latin Square design

Six Initial Weight categories are identified for the test animals in addition to Six Appetite categories.

• A test animal is then selected from each of the 6 X 6 = 36 combinations of Initial Weight and Appetite categories.

• A Latin square is then used to assign the 6 diets to the 36 test animals in the study.

Page 19: Latin Square Designs. Selected Latin Squares 3 x 34 x 4 A B CA B C DA B C DA B C DA B C D B C AB A D CB C D AB D A CB A D C C A BC D B AC D A BC A D BC.

In the latin square the letter

• A represents the high protein-cereal diet• B represents the high protein-pork diet• C represents the low protein-beef Diet• D represents the low protein-cereal diet• E represents the low protein-pork diet and • F represents the high protein-beef diet.

Page 20: Latin Square Designs. Selected Latin Squares 3 x 34 x 4 A B CA B C DA B C DA B C DA B C D B C AB A D CB C D AB D A CB A D C C A BC D B AC D A BC A D BC.

The weight gain after a fixed period is measured for each of the test animals and is tabulated below:

Appetite Category 1 2 3 4 5 6 1 62.1 84.3 61.5 66.3 73.0 104.7 A B C D E F 2 86.2 91.9 69.2 64.5 80.8 83.9 B F D C A E

Initial 3 63.9 71.1 69.6 90.4 100.7 93.2 Weight C D E F B A

Category 4 68.9 77.2 97.3 72.1 81.7 114.7 D A F E C B 5 73.8 73.3 78.6 101.9 111.5 95.3 E C A B F D 6 101.8 83.8 110.6 87.9 93.5 103.8 F E B A D C

Page 21: Latin Square Designs. Selected Latin Squares 3 x 34 x 4 A B CA B C DA B C DA B C DA B C D B C AB A D CB C D AB D A CB A D C C A BC D B AC D A BC A D BC.

The Anova Table for Example

Source S.S. d.f. M.S. F p-value

Inwt 1767.0836 5 353.41673 111.1 0.0000

App 2195.4331 5 439.08662 138.03 0.0000

Diet 4183.9132 5 836.78263 263.06 0.0000

Error 63.61999 20 3.181

Total 8210.0499 35

Page 22: Latin Square Designs. Selected Latin Squares 3 x 34 x 4 A B CA B C DA B C DA B C DA B C D B C AB A D CB C D AB D A CB A D C C A BC D B AC D A BC A D BC.

Diet SS partioned into main effects for Source and Level of Protein

Source S.S. d.f. M.S. F p-value

Inwt 1767.0836 5 353.41673 111.1 0.0000

App 2195.4331 5 439.08662 138.03 0.0000

Source 631.22173 2 315.61087 99.22 0.0000

Level 2611.2097 1 2611.2097 820.88 0.0000

SL 941.48172 2 470.74086 147.99 0.0000

Error 63.61999 20 3.181

Total 8210.0499 35

Page 23: Latin Square Designs. Selected Latin Squares 3 x 34 x 4 A B CA B C DA B C DA B C DA B C D B C AB A D CB C D AB D A CB A D C C A BC D B AC D A BC A D BC.

Experimental Design

Of interest: to compare t treatments (the treatment combinations of one or several factors)

Page 24: Latin Square Designs. Selected Latin Squares 3 x 34 x 4 A B CA B C DA B C DA B C DA B C D B C AB A D CB C D AB D A CB A D C C A BC D B AC D A BC A D BC.

The Completely Randomized Design

Treats1 2 3 … t

Experimental units randomly assigned to treatments

Page 25: Latin Square Designs. Selected Latin Squares 3 x 34 x 4 A B CA B C DA B C DA B C DA B C D B C AB A D CB C D AB D A CB A D C C A BC D B AC D A BC A D BC.

The Model for a CR Experiment

ijiijy

i = 1,2,…, t j = 1,2,…, n

yij = the observation in jth observation receiving the ith treatment

= overall mean

i = the effect of the ith treatmentij = random error

Page 26: Latin Square Designs. Selected Latin Squares 3 x 34 x 4 A B CA B C DA B C DA B C DA B C D B C AB A D CB C D AB D A CB A D C C A BC D B AC D A BC A D BC.

The Anova Table for a CR Experiment

Source S.S. d.f. M.S. F p-value

Treat SSTr t-1 MST MST /MSE

Error SSE t(n-1) MSE

Page 27: Latin Square Designs. Selected Latin Squares 3 x 34 x 4 A B CA B C DA B C DA B C DA B C D B C AB A D CB C D AB D A CB A D C C A BC D B AC D A BC A D BC.

Randomized Block Design

Blocks

All treats appear once in each block

1

2

3

t

1

2

3

t

1

2

3

t

1

2

3

t

1

2

3

t

1

2

3

t

1

2

3

t

1

2

3

t

1

2

3

t

Page 28: Latin Square Designs. Selected Latin Squares 3 x 34 x 4 A B CA B C DA B C DA B C DA B C D B C AB A D CB C D AB D A CB A D C C A BC D B AC D A BC A D BC.

The Model for a RB Experiment

ijjiijy

i = 1,2,…, t j = 1,2,…, b

yij = the observation in jth block receiving the ith treatment

= overall mean

i = the effect of the ith treatment

ij = random error

j = the effect of the jth blockNo interaction between blocks and treatments

Page 29: Latin Square Designs. Selected Latin Squares 3 x 34 x 4 A B CA B C DA B C DA B C DA B C D B C AB A D CB C D AB D A CB A D C C A BC D B AC D A BC A D BC.

• A Randomized Block experiment is assumed to be a two-factor experiment.

• The factors are blocks and treatments.

• It is assumed that there is no interaction between blocks and treatments.

• The degrees of freedom for the interaction is used to estimate error.

Page 30: Latin Square Designs. Selected Latin Squares 3 x 34 x 4 A B CA B C DA B C DA B C DA B C D B C AB A D CB C D AB D A CB A D C C A BC D B AC D A BC A D BC.

The Anova Table for a randomized Block Experiment

Source S.S. d.f. M.S. F p-value

Treat SST t-1 MST MST /MSE

Block SSB n-1 MSB MSB /MSE

Error SSE (t-1)(b-1) MSE

Page 31: Latin Square Designs. Selected Latin Squares 3 x 34 x 4 A B CA B C DA B C DA B C DA B C D B C AB A D CB C D AB D A CB A D C C A BC D B AC D A BC A D BC.

The Latin square Design

All treats appear once in each row and each column

Columns

Row

s1

2

3

t2

3

t

1

13

2

Page 32: Latin Square Designs. Selected Latin Squares 3 x 34 x 4 A B CA B C DA B C DA B C DA B C D B C AB A D CB C D AB D A CB A D C C A BC D B AC D A BC A D BC.

The Model for a Latin Experiment

kijjikkijy

i = 1,2,…, t j = 1,2,…, t

yij(k) = the observation in ith row and the jth column receiving the kth treatment

= overall mean

k = the effect of the ith treatmenti = the effect of the ith row

ij(k) = random error

k = 1,2,…, t

j = the effect of the jth column

No interaction between rows, columns and treatments

Page 33: Latin Square Designs. Selected Latin Squares 3 x 34 x 4 A B CA B C DA B C DA B C DA B C D B C AB A D CB C D AB D A CB A D C C A BC D B AC D A BC A D BC.

• A Latin Square experiment is assumed to be a three-factor experiment.

• The factors are rows, columns and treatments.

• It is assumed that there is no interaction between rows, columns and treatments.

• The degrees of freedom for the interactions is used to estimate error.

Page 34: Latin Square Designs. Selected Latin Squares 3 x 34 x 4 A B CA B C DA B C DA B C DA B C D B C AB A D CB C D AB D A CB A D C C A BC D B AC D A BC A D BC.

The Anova Table for a Latin Square Experiment

Source S.S. d.f. M.S. F p-value

Treat SSTr t-1 MSTr MSTr /MSE

Rows SSRow t-1 MSRow MSRow /MSE

Cols SSCol t-1 MSCol MSCol /MSE

Error SSE (t-1)(t-2) MSE

Total SST t2 - 1

Page 35: Latin Square Designs. Selected Latin Squares 3 x 34 x 4 A B CA B C DA B C DA B C DA B C D B C AB A D CB C D AB D A CB A D C C A BC D B AC D A BC A D BC.

Graeco-Latin Square Designs

Mutually orthogonal Squares

Page 36: Latin Square Designs. Selected Latin Squares 3 x 34 x 4 A B CA B C DA B C DA B C DA B C D B C AB A D CB C D AB D A CB A D C C A BC D B AC D A BC A D BC.

DefinitionA Greaco-Latin square consists of two latin squares (one using the letters A, B, C, … the other using greek letters , , , …) such that when the two latin square are supper imposed on each other the letters of one square appear once and only once with the letters of the other square. The two Latin squares are called mutually orthogonal.Example: a 7 x 7 Greaco-Latin Square

A B C D E F GB C D E F G A

C D E F G A BD E F G A B CE F G A B C DF G A B C D EG A B C D E F

Page 37: Latin Square Designs. Selected Latin Squares 3 x 34 x 4 A B CA B C DA B C DA B C DA B C D B C AB A D CB C D AB D A CB A D C C A BC D B AC D A BC A D BC.

Note:

There exists at most (t –1) t x t Latin squares L1, L2, …, Lt-1 such that any pair are mutually orthogonal.

e.g. It is possible that there exists a set of six 7 x 7 mutually orthogonal Latin squares L1, L2, L3, L4, L5, L6 .

Page 38: Latin Square Designs. Selected Latin Squares 3 x 34 x 4 A B CA B C DA B C DA B C DA B C D B C AB A D CB C D AB D A CB A D C C A BC D B AC D A BC A D BC.

The Greaco-Latin Square Design - An Example

A researcher is interested in determining the effect of two factors

• the percentage of Lysine in the diet and • percentage of Protein in the diet

have on Milk Production in cows.

Previous similar experiments suggest that interaction between the two factors is negligible.

Page 39: Latin Square Designs. Selected Latin Squares 3 x 34 x 4 A B CA B C DA B C DA B C DA B C D B C AB A D CB C D AB D A CB A D C C A BC D B AC D A BC A D BC.

For this reason it is decided to use a Greaco-Latin square design to experimentally determine the two effects of the two factors (Lysine and Protein).

Seven levels of each factor is selected• 0.0(A), 0.1(B), 0.2(C), 0.3(D), 0.4(E), 0.5(F), and

0.6(G)% for Lysine and • 2(a), 4(b), 6(c), 8(d), 10(e), 12(f) and 14(g)% for

Protein ). • Seven animals (cows) are selected at random for

the experiment which is to be carried out over seven three-month periods.

Page 40: Latin Square Designs. Selected Latin Squares 3 x 34 x 4 A B CA B C DA B C DA B C DA B C D B C AB A D CB C D AB D A CB A D C C A BC D B AC D A BC A D BC.

A Greaco-Latin Square is the used to assign the 7 X 7 combinations of levels of the two factors (Lysine and Protein) to a period and a cow. The data is tabulated on below:

P e r i o d 1 2 3 4 5 6 7

1 3 0 4 4 3 6 3 5 0 5 0 4 4 1 7 5 1 9 4 3 2 ( A ( B ( C ( D ( E ( F ( G 2 3 8 1 5 0 5 4 2 5 5 6 4 4 9 4 3 5 0 4 1 3 B ( C ( D ( E ( F ( G ( A 3 4 3 2 5 6 6 4 7 9 3 5 7 4 6 1 3 4 0 5 0 2 ( C ( D ( E ( F ( G ( A ( B

C o w s 4 4 4 2 3 7 2 5 3 6 3 6 6 4 9 5 4 2 5 5 0 7 ( D ( E ( F ( G ( A ( B ( C 5 4 9 6 4 4 9 4 9 3 3 4 5 5 0 9 4 8 1 3 8 0

( E ( F ( G ( A ( B ( C ( D

6 5 3 4 4 2 1 4 5 2 4 2 7 3 4 6 4 7 8 3 9 7

( F ( G ( A ( B ( C ( D ( E

7 5 4 3 3 8 6 4 3 5 4 8 5 4 0 6 5 5 4 4 1 0 ( G ( A ( B ( C ( D ( E ( F

Page 41: Latin Square Designs. Selected Latin Squares 3 x 34 x 4 A B CA B C DA B C DA B C DA B C D B C AB A D CB C D AB D A CB A D C C A BC D B AC D A BC A D BC.

The Model for a Greaco-Latin Experiment

klijjilkklijy

i = 1,2,…, t j = 1,2,…, t

yij(kl) = the observation in ith row and the jth column receiving the kth Latin treatment and the lth Greek treatment

k = 1,2,…, t l = 1,2,…, t

Page 42: Latin Square Designs. Selected Latin Squares 3 x 34 x 4 A B CA B C DA B C DA B C DA B C D B C AB A D CB C D AB D A CB A D C C A BC D B AC D A BC A D BC.

= overall mean

k = the effect of the kth Latin treatment

i = the effect of the ith row

ij(k) = random error

j = the effect of the jth column

No interaction between rows, columns, Latin treatments and Greek treatments

l = the effect of the lth Greek treatment

Page 43: Latin Square Designs. Selected Latin Squares 3 x 34 x 4 A B CA B C DA B C DA B C DA B C D B C AB A D CB C D AB D A CB A D C C A BC D B AC D A BC A D BC.

• A Greaco-Latin Square experiment is assumed to be a four-factor experiment.

• The factors are rows, columns, Latin treatments and Greek treatments.

• It is assumed that there is no interaction between rows, columns, Latin treatments and Greek treatments.

• The degrees of freedom for the interactions is used to estimate error.

Page 44: Latin Square Designs. Selected Latin Squares 3 x 34 x 4 A B CA B C DA B C DA B C DA B C D B C AB A D CB C D AB D A CB A D C C A BC D B AC D A BC A D BC.

The Anova Table for a Greaco-Latin Square Experiment

Source S.S. d.f. M.S. F p-value

Latin SSLa t-1 MSLa MSLa /MSE

Greek SSGr t-1 MSGr MSGr /MSE

Rows SSRow t-1 MSRow MSRow /MSE

Cols SSCol t-1 MSCol MSCol /MSE

Error SSE (t-1)(t-3) MSE

Total SST t2 - 1

Page 45: Latin Square Designs. Selected Latin Squares 3 x 34 x 4 A B CA B C DA B C DA B C DA B C D B C AB A D CB C D AB D A CB A D C C A BC D B AC D A BC A D BC.

The Anova Table for Example

Source S.S. d.f. M.S. F p-value

Protein 160242.82 6 26707.1361 41.23 0.0000

Lysine 30718.24 6 5119.70748 7.9 0.0001

Cow 2124.24 6 354.04082 0.55 0.7676

Period 5831.96 6 971.9932 1.5 0.2204

Error 15544.41 24 647.68367

Total 214461.67 48

Page 46: Latin Square Designs. Selected Latin Squares 3 x 34 x 4 A B CA B C DA B C DA B C DA B C D B C AB A D CB C D AB D A CB A D C C A BC D B AC D A BC A D BC.

Next topic: Incomplete Block designs