Jerry D. Wiggert (USM) Wen Long (UMCES) Jiangtao Xu (NOAA/NOS/CSDL) Raleigh R. Hood (UMCES) Erin B....
-
Upload
sydney-briggs -
Category
Documents
-
view
221 -
download
0
Transcript of Jerry D. Wiggert (USM) Wen Long (UMCES) Jiangtao Xu (NOAA/NOS/CSDL) Raleigh R. Hood (UMCES) Erin B....
Jerry D. Wiggert (USM)
Wen Long (UMCES)
Jiangtao Xu (NOAA/NOS/CSDL)
Raleigh R. Hood (UMCES)
Erin B. Jones (USM)
Lyon W. J. Lanerolle (NOAA)
Christopher W. Brown (CICS-ESSIC NOAA)
This research funded by NOAA-MERHAB & IOOS-SURA
Application of a Coupled Physical-Biogeochemical Application of a Coupled Physical-Biogeochemical Model to Simulate and Forecast the Ecological Model to Simulate and Forecast the Ecological
Variability of Chesapeake BayVariability of Chesapeake Bay
Aquatic Sciences, 20 February 2013
OutlineOutline
- ChesROMS Community Model
- Biogeochemical Model Implementation & Waypoints
- Assessment of Ecosystem Model Solutions
- Concluding Remarks
MODIS Image from Kemp et al. 2005
Aquatic Sciences, 20 February 2013
ChesROMS Community ModelChesROMS Community Model✦ ROMS 3.0
✦ Curvilinear Horizontally
✦ σ-coordinate Vertically
✦ Includes major tributaries
✦ Coarse mesh for model development (100*150*20)
✦ Forcing: Tides, Winds, Heat Fluxes and Rivers
✦ Validated Physical Model w/ 15-Year Hindcast (Xu et al., accepted)
✦ Currently expanding the biogeochemical model
✦ Goal: Improved Simulation of BGC processes & Water Quality Fields
✦ Use Output to inform Ecological Models (HABs, pathogens, etc.)
✦ Open Source Available at:
http://sourceforge.net/projects/chesroms/ ChesROMS Team:Chris Brown, Tom Gross, Brooke Denton, Raleigh Hood, Mohan Karyampudi, Lyon Lanerolle, Wen Long, Raghu Murtugudde, Dave Potsiadlo, M. Bala Krishna Prasad, Jerry Wiggert, Jiangtao Xu
Aquatic Sciences, 20 February 2013
CBP Sampling SitesCBP Sampling Sites
CB4.1C (upper bay)
CB5.3 (middle bay)
CB6.3 (lower bay)
Map Courtesy of Chesapeake Bay Program
Chesapeake Bay Program (http://chesapeakebay.net/)
Data Used For:Initial ConditionsRiver Boundary Conditions
Solution Validation Sites (following Xu & Hood, 2006)
CB3.3C (Upper Bay)CB5.3 (Mid-bay)C6.3 (Lower Bay)
• Chlorophyll• Dissolved Oxygen• DON, PON• Freshwater Flux• NO3/NO2/NH4
• TSS
Aquatic Sciences, 20 February 2013
Chesapeake Bay Ecological Prediction Chesapeake Bay Ecological Prediction System (CBEPS)System (CBEPS)
1) Ocean Quality Control System (OQCS)
• Automatic retrieval of historical and real-time data for validation and model forcing
2) Ocean Hydrodynamic Modeling System (OHMS)
•ChesROMS and Empirical Habitat Models
3) Ocean Model Assessment System (OMAS)
•Skill assessment of model predictions against data acquired by OQCS
4) Ocean Model Dissemination System (OMDS)
•Data archive and forecast dissemination
1)Utilizes data interoperability techniques to facilitate efficient provision of model results to end users
Brown, et al., J. Mar. Sys., 2013.
Aquatic Sciences, 20 February 2013
BGC Modeling Targets & Implementation GoalsBGC Modeling Targets & Implementation Goals
•Phytoplankton Bloom Dynamics• Capture Spatio-temporal Physical-Biogeochemical
Interactions Associated with Estuarine Circulation
•Particulate and Dissolved Constituents • N-cycling Linkage of Water Column & Benthos
•Dissolved Oxygen Evolution• Denitrification Onset - Offers Insight into N Balances &
Budget
Hindcast Year Chosen for Model Implementation is 1999
(“Typical” Conditions; Model Physics Validated)Xu, et al., Est. and Coasts., 2011.
Improved ChesROMS BGC Realism ->
More Robust Ecological Forecast System (CBEPS)
Aquatic Sciences, 20 February 2013
ChesROMS Biogeochemical Flows
1) Benthic NH4 Efflux & NO3 Uptake ramp up as overlying DO decreases
2) Reduce POM sinking in bottom layer
i) Promote O2 Demand in Water Column
ii) Promote BGC link to Estuarine Circulation
1) Reduce DL Sinking Velocity
2) Particle Aggregation (Stickiness)
i) Regulates Bloom Dynamics, POM Loads & Sinking/Export of Organic Matter
ii) Tends to Degrade O2 Evolution (WC DO Increases)
Sensitivity Explorations
Aspects of Implementation
Overcome “Tension” in BGC Mechanisms Bloom Dynamics <-> Hypoxia Realism <-> DIN Concentrations <-> Bloom Dynamics
Overall Goals
DO is Indicated by the Light Blue Background
Aquatic Sciences, 20 February 2013
Summary of Sensitivity StudiesSummary of Sensitivity Studies
Test 64 -> 85: ⬇ DL Sink Velocity (0.5 x); ⬆ Max Nitrification Rate (4x)Test 64 -> 91: Constant Phytoplankton Growth RateTest 91 -> 96: ⬇ Non-Dim Zooplankton Growth Rate (0.8x)Test 96 -> 100: ⬆ Coagulation Param (1.5x) Test 91 -> 104: Zooplankton Grazing ≠ f(Temperature)Test 100 -> 105: ⬇ DL Sink Velocity (0.5 x)
1 CB2.2
2 CB3.1
3 CB3.2
4 CB3.3C
5 CB4.1C
6 CB4.1W
7 CB4.2W
8 CB4.3C
9 CB4.3W
10 CB4.4
11 CB5.1
12 CB5.2
13 CB5.3
14 CB5.4W
15 CB5.5
16 CB6.1
17 CB6.3
18 CB6.4
19 CB7.1
20 CB7.1N
21 CB7.1S
22 CB7.2
23 CB7.2E
24 CB7.3
Index Station
Chlorophyll Ammonium
Nitrate DO
Aquatic Sciences, 20 February 2013
Hypoxic Volume (kmHypoxic Volume (km33) Comparisons) Comparisons
Initial Baseline Solution (Test 64)
Test 64 -> 85: ⬇ DL Sink Velocity (0.5 x); ⬆ Max Nitrification Rate (4x)
Test 91 -> 96: ⬇ Non-Dim Zooplankton Growth Rate (0.8x)
New Baseline Solution (Test 105)
• Extension of Hypoxic Volume Envelope for Model
• Overall, the 4 mg/ml threshold is a closer fit to the CBP-based Hypoxic Volume
• Seasonal variability consisting of onset and dissipation timing are reasonable
Aquatic Sciences, 20 February 2013
Baseline SolutionBaseline SolutionChlorophyll
Dissolved Oxygen
Upper Bay (4.1C)
Upper Bay
Mid-Bay (5.3)
Mid-Bay
Lower Bay (6.3)
Lower Bay
Aquatic Sciences, 20 February 2013
Extending the ModelExtending the Model
Ideally, Phys-BGC Model Will Naturally Capture Interannual Variabilityor
Model Provides Additional Insights into the Chesapeake System
Aquatic Sciences, 20 February 2013
SummarySummary1) Retain Organic Matter in Water Column
• Promotes Water Column Oxygen Demand (to a point)
• BUT! Oxic N-cycling Promotes O2 Production
2) Model Suggests a “Pulsing” of low DO conditions in bottom waters through the summer
• Linkage to variability in modeled phytoplankton biomass
Refining Hypoxic Fidelity in the Model
3)How to Amplify Denitrification in the Water Column and Anoxia Establishment?
• Adjust the Nitrification - Denitrification Transition
QuickTime™ and aMotion JPEG OpenDML decompressor
are needed to see this picture.
Bottom Dissolved Oxygen
Chesapeake Bay System and Availability of CBP Data Provide an Ideal Proving Ground for Development of the Biogeochemical Module
Aquatic Sciences, 20 February 2013
Thank You!Thank You!