Intraspecific Variation and Phenotypic Plasticity in the ... · ii Intraspecific Variation and...
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Intraspecific Variation and Phenotypic Plasticity in the invasive vine Vincetoxicum rossicum
by
Simone-Louise E. Yasui
A thesis submitted in conformity with the requirements for the Master’s degree of science
Department of Ecology and Evolutionary Biology
University of Toronto
© Copyright by Simone-Louise Yasui 2016
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Intraspecific Variation and Phenotypic Plasticity in the invasive
vine Vincetoxicum rossicum
Simone-Louise Yasui
Department of Ecology and Evolutionary Biology
2016
Abstract
The human-mediated movement of species across the globe has led to the growing field of
invasion biology, which is devoted to understanding more about invasive species and the impact
they have on the ecosystems into which they are introduced. One particular invasive species that
is extremely abundant and widespread in Southern Ontario is the vine species Vincetoxicum
rossicum. V. rossicum is found in a variety of environments including open fields and forest
understories, however, little is known about how the traits of this species varies in the different
environments. In a field study in the Rouge Urban National Park and a complementary
greenhouse study, I found that this invasive species optimizes light capture efficiency by
changing its morphological traits. This potentially contributes to its invasion success and
provides further insights and its future spread. Additionally, this work can provide insight on
other invasive species that exhibit similar invasion strategies
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Acknowledgments
I would like to thank the Rouge Urban National Park for allowing me to conduct my experiment.
Many people have assisted with this thesis, and their help has been invaluable, especially my
supervisor Dr. M.W. Cadotte, and my committee members Dr. N. Mandrak and Dr. P. Kotanen. I
would also like to thank the various people who helped me along the way, including the many
volunteers who helped me collect data, Dr. J.S. MacIvor, Dr. M. Isaac, C. Arnillas, A. Choi, S.
Livingstone, S. Gagliardi, K. Carscadden, Dr. R. Marushia and my parents
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Table of Contents
1. Chapter 1: Introduction
1.1 Invasion Biology …………………………………………………………………. 1
1.2 Potential Mechanisms contributing to Invasions ………………………………… 2
1.3 Thesis Overview …………………………………………………………………. 5
1.3.1 Chapter 2: Quantifying intraspecific variation of Vincetoxicum rossicum
1.3.2 Chapter 3: Quantifying phenotypic plasticity and assessing enemy release
References ……………………………………………………………………………. 9
2. Chapter 2: Intraspecific variation in the morphology of the invasive vine, Vincetoxicum
rossicum across two environmental gradients
2.1 Introduction ……………………………………………………………………… 12
2.2 Methods and Materials …………………………………………………………... 15
2.2.1 Study Site
2.2.2 Sampling
2.2.3 Statistical Analysis
2.3 Results ……………………………………………………………………………. 20
2.3.1 Light Availability
2.3.2 Soil Nutrient Availability
2.3.3 Multivariate linear mixed effect models
2.4 Discussion ………………………………………………………………………... 25
2.4.1 Light Availability
2.4.2 Soil Nutrient Availability
2.4.3 Broader Implications
References ……………………………………………………………………………. 33
Tables ………………………………………………………………………………… 38
Figures ………………………………………………………………………………... 44
Appendix ……………………………………………………………………………... 55
3. Chapter 3: Quantifying phenotypic plasticity and assessing enemy release
3.1 Introduction ………………………………………………………………………. 57
3.2 Methods and Materials …………………………………………………………… 60
3.2.1 Study Site and Experimental Design
3.2.2 Plant Sampling
3.2.3 Biological Control
3.2.4 Statistical Analysis
3.3 Results ……………………………………………………………………………. 64
3.4 Discussion ………………………………………………………………………... 68
References ……………………………………………………………………………. 75
Tables ………………………………………………………………………………… 78
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Figures ………………………………………………………………………………... 81
Appendix ……………………………………………………………………………... 92
4. Chapter 4: Thesis summary
4.1 Summary of chapters …………………………………………………………….. 96
4.2 Implications and future directions ……………………………………………….. 97
References …………………………………………………………………………… 99
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List of Tables
2.1: Linear models of the morphological traits regressed by the environmental variables
2.2 Univariate linear mixed effect models
2.3 Multivariate liner mixed effect models
3.1 Results from the ANOVA Tests for each of the morphological traits for each of the
treatments for Day 60 of the experiment
3.2 Results from the ANOVA Tests for each of the morphological traits for each of the
treatments for Day 100 of the experiment
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List of Figures
2.1 The relationship between species richness and the environmental gradients
2.2 The relationship between species richness and the biomass measurements
2.3 The relationship between various plant traits and log transformed photosynthetically active
radiation
2.4 The relationship between various plant traits and photosynthetically active radiation
2.5 The relationship between various plant traits and canopy cover
2.6 The relationship between various plant traits and soil phosphate concentration
2.7 The relationship between various plant traits and log transformed soil nitrogen concentration
2.8 The relationship between various plant traits and soil nitrogen concentration
2.9 The relationship between various plant traits and log transformed soil nitrate concentration
2.10 The relationship between various plant traits and soil nitrate concentration
2.11 The relationship between plant traits and soil ammonia concentration
3.1 The distribution of trait values across the two light conditions, both at the start of the
experiment and at the end of the experiment
3.2 The distribution of trait values across the four different start conditions, both at the start of
the experiment and at the end of the experiment.
3.3 The distribution of trait values across the three different defoliation treatments
3.4 The distribution of trait values in response to the interaction between light availability and
defoliation
3.5 The distribution of trait values in across the three sites where the roots were collected
3.6 Aboveground biomass across the three sites where the roots were collected
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3.7 The distribution of trait values in response to the interaction between which site the roots
were collected from and which light condition the roots were originally found in
3.8 The distribution of trait values in response to the interaction between which site the roots
were collected from and which light condition the roots were originally found in
3.9 The distribution of trait values in response to the interaction between which site the roots
were collected from and light availability
3.10 The distribution of trait values in response to the interaction between which site the roots
were collected from and light availability
3.11 The distribution of trait values in response to the interaction between which site the roots
were collected from and defoliation
List of Appendices
2.A1: Measured morphological traits
2.A2: Site map of the Rouge National Urban Park
2.A3: a) Residuals vs Fitted for Total biomass and canopy coverage
3.A1 The distribution of trait values across the twelve different treatment types
3.A2 Results of the Tukey’s HSD test for the 12 treatment types
3.A3: Map of the University of Toronto Scarborough Campus. Yellow pin indicates the Science
Building roof where the greenhouse experiment took place.
3.A4: Picture of the experimental set-up for the greenhouse experiment
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Chapter 1 Introduction
1.1. Invasion Biology
The spread and movement of organisms around the globe has drastically changed our
world (Vilà et al. 2005). While some species that are economically beneficial have been
intentionally introduced, other species have been transported by accident. Whether by intention
or by accident, the movement of species across the globe can lead to unforeseen consequences,
especially species invasion. Increasing concern about such consequences has led to the growth of
the field invasion biology (Cadotte 2006). With regards to the work of presented in this thesis, an
invasive species will be defined as a non-native species that has established in a new
geographical range in which it has proliferated, spread, and persists to the detriment of that
particular habitat (Mack et al. 2000). For a non-native species to become invasive, it must
undergo the entire invasion process, where it must pass through multiple abiotic and biotic
barriers (Blackburn et al. 2011). After passing through these barriers this species could then have
a large impact on biodiversity (Gurevitch and Padilla 2004) and may have a negative impact on
ecosystem functioning (Ehrenfeld 2010).
Overall the field of invasion biology has expanded and grown into a vital subfield of
community ecology (Davis et al. 2006). Ecologists in this field are driven by a few general
questions, which include: How and why do some non-native species become invasive within a
new introduced range while others do not?; i.e. what determines how invasive, in terms of the
degree of negative impacts, an introduced species will be (Drake et al. 1989)? Certainly, a major
driving force behind this is trying to understand the effect of invasive species on native
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biodiversity (Elton 1958). Many researchers are concerned with how the introduction of invasive
species can drive the loss of native biodiversity (Richardson and Pysek 2008) and, ultimately,
global biodiversity (Butchart et al. 2010).
The loss of biodiversity is of particular concern as it has been shown that biodiversity is a
vital component to the proper functioning of ecosystems (Hooper et al. 2005) and to ecosystem
stability (Cleland 2012). The reduction of ecosystem functioning has been most apparent, or at
least most visible, when invasive species disrupt the interactions of native plants with their
mutualistic pollinators (Traveset and Richardson 2006). Disruptions to mutualistic interaction
could result in a decrease in pollination rate, which could potentially lead the decreased fitness of
native plants (Brown et al. 2002). Ultimately, this could affect other vital processes such as
nutrient cycling or productivity
1.2 Potential Mechanisms contributing to Invasions
The seminal work of Charles Elton, published fifty-seven years ago in his book “The
ecology of invasions by animals and plants” (Elton 1958) has inspired many researchers to
explore the underlying mechanisms that contribute to invasion success. Overall, this has led to an
overabundance of hypotheses regarding what makes the best invader (Lowry et al. 2012). In
particular, this type of research has split into two different streams of thought, which are not
mutually exclusive. The first is determining what traits contribute to the invasive potential or
invasiveness of a species (Richardson and van Kleunen 2007), and the second examines
invasibility or what makes a particular habitat more or less susceptible to incoming species
(Davis et al. 2005).
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Many proposed mechanisms examine the invasiveness of a species, primarily focusing on
specific traits that aid the invader at different times during the invasion process (Lowry et al.
2012). For instance, at the beginning of the invasion the species needs to maintain a viable
population, thus, being broadly tolerant of different environmental conditions could aid it in its
establishment (Baker 1965). Additionally, having a high reproductive output can protect it from
being excluded by the native community (Lockwood et al. 2005). Other mechanisms that help
with the persistence of an introduced species fall under the general idea of ‘inherent superiority’,
where an introduced species is able to become highly abundant because it has one or more
characteristics that help it out-compete native species. These characteristics include ‘ideal weed
traits’ described by Baker (1965), such as high reproductive output, effective dispersal ability, or
rapid growth. Additional mechanisms primarily look at biotic interactions; these hypotheses
include the enemy release hypothesis (Keane and Crawley 2002), where an invader in the
introduced range is not regulated by the presence of an enemy such as an herbivore or predator.
This can potentially result in the evolution of increased competitive ability (EICA) in the
invader, thereby increasing its invasive potential (Blossey and Notzoid 1995; Callaway and
Ridenour 2004).
Regarding the invasibility of a region, studies often discuss characteristics of the system’s
niche space and describe how disturbances can open up new niche space for potential invaders in
a process described as the novel niche hypothesis (MacDougall et al. 2009). Disturbances can
potentially lead to an influx of resources, which has been hypothesized to increase a habitat’s
susceptibility to invasion because there are more unused resources to utilize (Fluctuating
resource availability - Davis et al. 2000). Others have looked at how the diversity of the system
affects its invasibility (Diversity-resistance hypothesis - Elton 1965; Kennedy and Naeem 2002).
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For instance, in habitats that are not overly diverse, either in the number of species or in
functional diversity, the trait space occupied by this community may have more open or empty
niche space which could be occupied by an invader (MacDougall et al. 2009).
The list of mechanisms can go on and on, yet empirical work actually assessing the
validity of some of these hypotheses is sometimes lacking. For instance, Jeschke et al. (2012)
reviewed six of the leading hypotheses to date that examined the interactions of invaders with
their new environment and found that some of the hypotheses were better supported by empirical
evidence than others. Lowry et al. (2012) also demonstrated that much of the invasion literature
has primarily focused on terrestrial systems, with many of these studies only looking at plant
invasions. In their review of 1537 papers, they note that, of the vast number of hypotheses,
researchers generally focused on the ones that were related to the superior competitive ability of
the invader, environmental disturbance, and invaded community species richness.
There is a plethora of different hypothesized mechanisms that can contribute to either the
invasiveness of a particular non-native species, or the invasibility of the new range in which it is
introduced. Within response to the overabundance of these proposed mechanisms some
researchers have gone back and begun to synthesize the different hypotheses into a single
framework to reduce the redundancy between them (Catford et al. 2012). I believe it is important
to revisit and synthesize but, in addition, I believe we need to strengthen or find more support for
some of these hypotheses. Only recently have researchers considered determining how
intraspecific variation may influence community assembly and, by extension, invasion success
(Laughlin et al. 2012). Intraspecific variation is the degree of phenotypical difference among
individuals of a single species (Laughlin et al. 2012). This variation provides the raw material for
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natural selection to act upon, and therefore, is important in evolutionary theory (Bolnick et al.
2011). Within an ecological context, intraspecific variation is important to study as it has been
shown to structure communities (Siefert 2012) and influence ecosystem functioning (Lecerf and
Chauvet 2008). Within an invasion context, knowing more about intraspecific variation may help
us better understand community assembly processes such as habitat filtering and niche
differentiation (Jung et al. 2010). Understanding more about these community assembly
processes may then allow us to accurately determine what the ecological niche of an introduced
species is. Knowing this could potentially aid researchers in predicting which introduced species
will become invasive, where that invader could potentially spread, and what kind of impacts it
may have in regions where it forms highly abundant populations.
1.3 Thesis Overview
Using the perennial vine Vincetoxicum rossicum (Asclepidaceae) as my study species, I
assess the intraspecific variation of this highly invasive species across different environmental
gradients. I will assess the contribution of two mechanisms, plasticity and enemy release, on the
invasiveness of this widely distributed invasive species. Vincetoxicum rossicum, which is
commonly known as Dog-Strangling Vine (DSV) and Pale Swallow-Wort, was chosen as the
study species because it is a highly invasive species that is well established within southern
Ontario. Since this species is found in a variety of environments, it makes an ideal study
organism to examine intraspecific variability and various plastic traits that may contribute to its
invasiveness. Additionally, within the introduced range DSV does not have any natural or native
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enemies. Therefore, by using different levels of artificial defoliation, I will be able to assess the
plastic response of DSV to defoliation.
Briefly, DSV was introduced to North America from the Ukraine in the late 1800s
(Kricsfalusy and Miller 2008). After this initial introduction, this species experienced a lag or
latency period of about 60-70 years, where there was limited spread and low population density.
This latency period has been hypothesized to be a result of allee effects, where there is a lower
rate of increase of small populations relative to large populations (DiTommaso et al. 2005). After
this lag period, DSV began to spread considerably and form high density monocultures which
can largely impact both native plant diversity (DiTommaso et al. 2005) and arthropod diversity
(Ernst and Cappuccino 2005). Thus, this species has now become a major concern within
Ontario and has been listed on the Noxious Weed List of Ontario.
DSV has many of the traits that Baker (1965) had indicated make the ideal weed,
especially in regards to its reproductive potential. DSV is self-compatible and either insect
pollinated or self-pollinated. The seeds that it produces are wind dispersed but do not usually
travel far distances since the seeds are generally polyembryonic making them heavier, but more
likely to germinate. DSV is also capable of clonal reproduction via vegetative growth from
rhizomes (DiTommaso et al. 2005). This vegetative growth is particularly useful for DSV within
shaded areas where the plant produces less flowers and fewer and lighter seed (Sheeley 1992).
Vegetative growth may allow the plants to persist for years until they can exploit any canopy
disturbance that may occur (DiTommaso et al. 2005) Within its native range, DSV is
documented as a rare understory species; however, in its introduced range, it is a dominant plant
capable of forming dense monocultures in both the understory and open field.
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Currently, we know about some of the characteristics of DSV growth and reproductive
output in full sun and full shade conditions (Cappuccino and Mackay 2002; Smith et al. 2006;
Milbrath 2008; and Averill et al. 2011). Generally, DSV is less fecund in the understory, where it
is less dense as a result of decreased vegetative growth, produces fewer flowers, follicles
(seedpods), and seeds (Smith et al. 2006; and Milbrath 2008). Despite this, DSV has been found
to be quite persistent within the understory in Southern Ontario, and the mechanisms
contributing to this persistence are poorly understood. It is believed that plasticity and having a
broad niche breadth enables it to survive in these areas (Averill 2011) and, thus, the focus of this
study was on examining the plastic responses that DSV may exhibit in various light conditions.
The overall aim was to determine how phenotypic plasticity potentially contributes to DSV
invasiveness. DSV will have to express different strategies to survive in the different light
environments, and by measuring the differences in functional traits I can quantify the differences
in these strategies.
1.3.1 Chapter 2: Quantifying intraspecific variation of Vincetoxicum rossicum
In a field study conducted at the Rouge Urban National Park, I observed the differences
in a suite of functional traits across various environments to determine how many of these traits
varied within species and inferred how this variation may affect the success of DSV as an
invader. I hypothesized that if DSV has differential adaptations to multiple environments then it
will exhibit a large range of intraspecific variation across the different environments, particularly
with light availability and soil composition.
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1.3.2 Chapter 3: Quantifying phenotypic plasticity and assessing enemy release
Using a common garden method, I directly tested the plastic response of DSV which was
collected from two different light environments (open and closed canopy), by manipulating the
amount of available light (full sun and full shade). Additionally, I determined if DSV exhibits
plasticity in its growth traits in response to artificial defoliaiton. I hypothesized that if DSV
responds to changes in light availability then it will significantly changes in its growth traits from
low to high light.
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Chapter 2 Intraspecific variation in the morphology of the invasive vine Vincetoxicum rossicum across two environmental gradients
2.1 Introduction
The invasion process follows several stages (Richardson et al. 2000) and depends on
progression past several filters or barriers that limit either the spread or density of an introduced
species (Colautti and MacIsaac 2004). These barriers include abiotic or environmental filters,
which include major geographical barriers, such as oceans or mountain ranges that limit dispersal
(Richardson et al. 2008), regional climate that places physiological limitations on newly
introduced species affecting their ability to establish in a particular habitat (Richardson et al.
2008). Two other abiotic filters on a local scale that could affect invasion success, and will be the
primary focus of this chapter, include light availability, which has been shown to limit that
distribution of species that are shade intolerant (Valladares and Niinemets 2008), and soil
nutrient availability, particularly soil nitrogen and soil phosphorus which are the two main
limiting nutrient resources in terrestrial ecosystems (Vitousek et al. 2010). Generally, higher soil
nutrients have been shown to have positive effects on individual species (Chaplin et al. 1986)
and communities (Bracken et al. 2014), where nutrient additions can increase biomass
production (Chiarucci et al. 1999) and influence diversity (Hobbs and Atkins 1988). However,
an excess of soil nutrients, particularly nitrogen, can result in the homogenization of the
environment causing a decline in the species diversity of a community (Gilliam 2006).
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Other important filters to biological invasions include biotic regulators, such as predators,
strong competitive interactions or a lack of mutualistic interactions (Richardson et al. 2006). If
all of these barriers are passed, the introduced species considered invasive and may become
dominant in terms of overall abundance and distribution, meaning it can exert a strong influence
on the new community (Levine et al. 2003). Invasive species that become dominant can
potentially result in degradation of community structure and biotic interactions between native
species (Traveset and Richardson 2006). Through dominance and disrupting species interactions,
native species may be excluded, which can result in the reduction or loss a particular ecosystem
functions, including productivity (Cadotte 2013) and ecosystem stability (Tilman et al. 2006).
Many mechanisms have been hypothesized to contribute to the invasiveness of a
particular species or the invasibility of a particular region (see Chapter 1). Studies examining the
causes and consequences of invasions have used ecological niche modelling (ENM) using
occurrence data for invaders to map their niche (Peterson 2003). Other types of models, such as
those used to predict community assembly, focus more on species traits (Laughlin et al. 2012).
These models use the dimensionality of a species form and function to determine the trait space
that the species fills, thus, predicting its abundance and distribution within a community
(Laughlin 2014). In this trait-based approach species are characterized by biological attributes,
such as physiological, morphological, or life history traits (Webb et al. 2010).
A trait-based analysis taking into account the intraspecific variation of the invader would
provide an insightful outlook on the invasion success of an invader. This type of approach would
provide information about the specific response that species have to changes in resource
availability. Understanding more about how an invasive species responds to the environment
14
should give an indication about which areas are currently at risk, in terms of species losses, due
to the increasing abundance of the already established invader, and also which areas are
potentially at risk should the invader spread into that region.
Here, I examine several morphological traits of the invasive species Dog-Strangling
Vine, Vincetoxicum rossicum to determine the degree of intraspecific variation this species
expresses. Dog strangling vine (DSV) has severe impacts on many ecosystems (see Chapter 1),
due to its high abundance and widespread geographical distribution (DiTommaso et al 2005).
The goal of this study will be to determine how this species responds to two environmental
gradients, light and nutrient availability. This study was conducted at the Rouge Urban National
Park, which is Canada’s first urban national park and is unique in that it is protecting and
conserving wildlife near Canada’s largest city. DSV is found in high abundance throughout the
Rouge Park and, thus, poses as a large threat to native vegetation, such as common milkweed
which is the preferred host for monarch butterflies, a threatened species in North America
(DiTommaso and Losey 2003).
In this study, I will address two specific hypotheses regarding the variation in
morphology of DSV. First, the suite traits associated with light capture and efficiency will show
variability across the gradient of light availability. Specifically, I expect that DSV in the low
light will have higher specific leaf area than leaves in high light conditions to optimize light
capture. Second, DSV will show variability in traits associated with efficient nutrient uptake and
growth across a gradient of soil nutrient availability. Specifically, I expect that individuals of
DSV will have higher biomass and greater seed output in areas with larger concentrations of soil
nutrients.
15
2.2 Methods and Materials
2.2.1 Study Site
The study was conducted at the Rouge Urban National Park, located in Scarborough,
Ontario. The study started in spring 2014, 12 30x30m field sites were chosen based on the
presence of DSV. These sites varied in forest canopy coverage; refer to Appendix for a map of
the study area. Within each field site, five transects were laid down, and along each transect 5
plots were flagged, resulting in 25 plots per site and 300 plots in total. Some sites were
categorized as “Transitional sites” and followed a gradient of canopy coverage ranging from 0-
20% to 70-90% along the 5 transects. Other sites were categorized as “Understory” sites and had
an average canopy coverage of 75%.
2.2.2 Sampling
In the summer of 2014, from mid-June until mid-October, a suite of morphological plant
traits, including aboveground biomass, leaf, and seed traits were collected from each site (Refer
to Appendix, Table A1). A subsample of the aboveground biomass was collected for all plant
species present in each of the 300 plots. Prior to collecting the biomass, the number of species
and the percent cover for each species was estimated using intervals of 5% coverage for each of
the 300 plots. The samples of biomass were dried in a standing oven for a minimum of 2 days at
60°C before being weighed. Larger samples were measured in grams on standard scales with
accuracy up to two decimal points, while samples smaller than 2g were measured on precision
16
scale (Sartorius Practum Analytical Weighing balance) with accuracy up to four decimal places.
The total biomass for each plot was determined by summing the biomass of all species.
Five leaf traits were assessed in this study, including: specific leaf area (SLA), which is
an positive correlate of relative growth rate (Cornelissen et al 2003); leaf dry matter content
(LDMC), which is a negative correlate of relative growth rate (Cornelissen et al 2003); leaf
nitrogen content (LNC), which correlates with mass-based maximum photosynthetic rate
(Cornelissen et al 2003); leaf carbon content (LCC), which gives an indication of structural
strength of the leaf (Cornelissen et al 2003); and, the carbon-nitrogen ratio, which is another
indicator of growth and quality (Royer et al 2013). Within the plots where DSV was present (284
of the 300), 10 leaf samples of DSV were collected. Samples were collected per plot by choosing
a mature plant at random. The fresh weight of each leaf was measured with a precision scale and
an image of each leaf was made using a scanner and later processed using ImageJ in order to
determine the leaf area. The leaves were than dried for a minimum of 48 hours, in a standing
oven at 60°C and then reweighed in order to determine the dry weight. Leaf area and dry weight
were used to determine SLA, and dry and fresh weight was used to determine LDMC for each
leaf.
LNC and LCC was determined using the Thremo-Fischer EA 2000 elemental analyzer in
the in TRACES (Teaching and Research in Analytical Chemical and Environmental Science) lab
at UTSC. When determining LNC and LCC, a subset of 120 of the 300 plots was assessed. At
each site, leaf samples from two transects consisting of five plots each were used to determine
LNC and LCC. Full transects, where all five plots along the transect had DSV present, were
randomly chosen for this subsample. To run samples through the elemental analyzer several
17
leaves collected from an individual plot were ground together, thus producing a plot-level
measurement of LNC and LCC. The carbon nitrogen ratio (C:N) for each plot was determined by
dividing LCC by LNC.
Three seed and seed pod traits were assessed. These included individual seed weight,
seed pod weight, and seed pod length. Seed weight gives an indication of germination success as
larger seeds are likely to be polyembryonic which has been shown to increase the likelihood of
germination (Ditomasso et al 2005). Seed pod weight and length also give rough estimates of
germination success as larger pods were predicted to contain larger seeds. These two traits were
used as seed weight was highly skewed towards small seeds (<0.0001g). Seed pods were
collected when the majority of the DSV in the open areas with a greater amount of light had
developed fully mature seed pods. At this time, the seed pods for both transitional and understory
sites were collected from all plots where they were present. The weight and width of the most
mature and healthiest seed pods, which were the largest pods present in the plot that had no
visible damage and hadn’t already burst open, were measured (N=5) and, after removing the
coma of long hairs, the seeds from each pod were counted and weighed.
Information on the two environmental gradients was collected at the same time as the
plant trait values. For the light gradient, photosynthetically active radiation (PAR) measurements
were taken for each plot using a LI-COR LI-191R line quantum sensor. Additionally, a canopy
photo per plot was taken using a Hero 3 GoPro fitted with a fisheye lens. These images were
then analyzed using ImageJ to determine the percentage of tree canopy cover. Lastly, soil
measurements were obtained by taking soil samples collected from each plot using a soil auger,
where two cores were taken from each plot. Soil moisture was calculated by measuring 10-15g
18
of wet soil using a precision scale, drying it at 100°C in a standing oven for 48, reweighing to
obtain the dry weight, and then moisture was determined by subtracting the dry weight from the
fresh weight. Soil pH was measured using a pH meter (Mettler Toledo pH meter). Soil nutrient
availability was determined by using a Quikchem 8500 series 2 flow injection analyzer (FIA).
Using the FIA, the concentration of soil phosphorus in the form of orthophosphate, the simplest
form of phosphorus, was determined for each plot. Soil nitrogen concentration, which is the sum
of nitrate and ammonia, was also determined for each plot using the FIA.
2.2.3 Statistical Analysis
Linear models were applied to each of the plant traits to get a general idea of the direction
of the trait response to the two environmental gradients Linear mixed effect regression models
(LMER) were also applied to the plant traits using the R package Lme4 (Bates et al. 2014).
LMER models were applied to the analysis because both the site where the plots were located
and the placement along the five different transects represent independent samples. Therefore,
site and transect were designated as random effects to resolve the non-independence of sampling
(Winter 2013). The models were considered significant if the p-value was <0.05 in comparison
to a null model with no fixed effects. Four different types of univariate models were used, the
model with the lowest Akaike Information criterion (AIC) value was considered the best. Both
the marginal R2, which describes the proportion of variance explained by the fixed effects, and
the conditional R2, which describes the proportion of variance explained by both the fixed and
random effects were determined using the r.squared function developed by Johnson (2014). This
function also provides AIC values for the models. All univariate models were allowed to have
19
random intercepts for the two random effects; however, the random effect for transect was
removed if the intercepts standard deviation was zero. The four model types include: 1) the fixed
effect with the random effects; 2) same as before but both random effects were also allowed to
vary in their slopes; 3) the slopes could vary for site but not for transect; and 4) the slopes could
vary for transect but not for site.
Multivariate linear mixed effect models incorporating multiple environmental variables
were also used to determine if there were interacting effects between the environmental
variables. Multivariate models were chosen using the step function in the R package lmerTest.
This function performs a backward elimination of non-significant effects. The significance of
these models was determined by comparing the model against a null model that did not have any
fixed effects. The individual values of nitrate and ammonia concentration were removed from the
multivariate models do to scaling issues.
For all models, the response variables were log transformed unless stated otherwise. Plant
traits were log transformed r to resolve issues with skewness in the data and heteroscedasticity.
Generally, most of the data was skewed left since most of the data collection occurred in the
understory with few data points coming from open field habitats (refer to Appendix Figure A3).
Homoscedasticity was assessed examining graphs with residuals plotted against the fitted or
predicted values (refer to Appendix). If the distribution of the residuals was not normalized
following by log transforming the data, I applied a quadratic formula to the model. All statistical
analyses were conducted using the R statistical program version 3.1.3 (R Core Team 2014).
20
2.3 Results
2.3.1 Light availability
Before examining the relationship between the morphological traits of DSV and light
availability, I examined the effect of light on a community measure of diversity, species richness.
It was found that there was a positive linear relationship between the number of species in a plot
and photosynthetically active radiation (PAR) (Fig 1i: R2 = 0.0272, F269 = 8.55, p = 0.00375) and
a negative non-linear relationship with canopy cover (Fig 1ii: R2 = 0.0887, F268 = 14.13, p =
1.46e-06). Consistent with this result, there was a positive non-linear relationship between
diversity and total plot biomass plant biomass (Fig. 2i: R2 = 0.408, F204 = 73.1, p = <2.2e-16).
There was a very distinctive relationship between total plot biomass and light availability (Fig 4).
With PAR, there was a strong positive trend (Fig. 4i: R2 = 0.01, F205 = 23.8, p = 2.15e-06), which
corresponds with the negative trend for canopy cover (Fig. 5i: R2 = 0.124, F205 = 30.1, p = 1.2e-
07). With canopy cover, there was a non-linear response, indicating that once a certain threshold
of cover is achieved, there is a sharp decline in the amount of biomass present in the area (Fig.
5i).
When examining DSV biomass individually, I found that the best fitting model was a
quadratic model, which predicted that there was a negative relationship with diversity, where an
increase in plot diversity resulted in a decrease in DSV biomass (Fig. 2ii: R2 = 0.0766, F258 =
10.7, p = 3.45e-05). DSV biomass followed similar trends as total plot biomass, with a positive
linear relationship for PAR (Fig. 3i: R2 = 0.0478, F259 = 14.0, p = 0.00022) and a negative non-
linear relationship with canopy cover (Fig. 5ii: R2 = 0.169, F259 = 27.41, p = 1.61e-11).
21
Leaf dry matter content (LDMC) and leaf carbon content (LCC) both had positive linear
relationships (Fig. 3ii and v: R2 = 0.136, F2834 = 449, p = <2.2e-16, and R
2 = 0.0688, F118 = 8.78,
p = 0.0038, respectively) with PAR , while specific leaf area (SLA) and leaf nitrogen content
(LNC) had negative linear relationships (Fig. 3iii and iv: R2 = 0.285, F2834 = 1132, p = <2.2e-16,
and R2 = 0.127, F118 = 18.3, p =3.86e-05, respectively). Next, I examined how the traits
responded to canopy cover. As expected, the opposite relationships were found with PAR;
however, for LDMC and SLA, there were not linear relationships (Fig. 5iii and iv). LNC was
positively related to canopy cover (Fig. 5v: R2 = 0.344, F118 = 63.4, p = 1.19e-12), however,
variation in LCC was not significant.
There were no significant relationships between individual seed weight and any of the
environmental variables with the simple linear models, however, the weight of the seed pods
significantly increased with increasing PAR (Fig. 4ii: R2 = 0.016, F995 = 17.2, p = 3.67e-05) with
a corresponding decrease with increasing canopy cover (Fig. 5vi: R2 = 0.0109, F995 = 11.9, p
=0.000577). Seed pod weight was the only plant trait that was not log transformed to fit the data
into a linear model since the best performing model based on AIC was non-transformed. The
same pattern for PAR and canopy cover was seen with seed pod length (Fig. 3vi and 5vii: R2
=0.0167, F995 = 17.9, p = 2.52e-05, and R2 = 8.75e-03, F995 = 9.8, p = 1.8e-03).
The univariate LMER models for which leaf traits was the response variable showed that
either canopy cover or PAR were the best predictors based on the AIC values (Table 3). LNC,
leaf carbon nitrogen ratio (C:N), and LDMC were the response variables that were best
correlated with models using canopy cover as the fixed effect and site and transect as random
effects. LCC was best predicted using the model that had PAR as the fixed effect. Overall, LNC,
22
LCC, SLA were positively associated with the fixed effects, while C:N and LDMC were
negatively associated with the fixed effects (Table 3). The best LMER models for both seed pod
weight and pod length included PAR as a fixed effect (AIC = -3479.8, R2 = 0.432, χ
2 (3) = 39.3,
p =1.68e-07, and AIC = -903.1, R2 =0.477, χ
2 (3) = 30.0, p =1.41e-06).
2.3.2 Soil nutrient availability
Examining the two the soil properties, phosphate and nitrogen concentration, I found that
there was a negative relationship for species richness and soil phosphate (Fig. 1iii: R2 = 0.0424,
F269 = 13.0, p = 0.0038). However, there were no trends for species richness and soil nitrogen.
For the biomass measurement, there was no relationship for total biomass and phosphate
concentration but, there was a negative relationship for nitrogen concentration (Fig. 7i: R2 =
0.0272, F205 = 6.77, p = 0.01). For soil phosphate, DSV had a positive relationship (Fig. 6i: R2 =
0.0486, F259 = 14.3, p = 0.0002). However, DSV biomass differed from total plot biomass with
soil nitrogen concentration since it was not significant. To investigate this further, soil nitrogen
was separated into its component parts, nitrate and ammonia, and it was found that both total
biomass and DSV biomass was negatively correlated with soil nitrate concentration (Fig. 9i and
ii: R2 = 0.086, F254 = 25, p = 1.08e-06, R
2 = 0.0312, F259 = 9.96, p = 0.0018). With soil ammonia
concentration there was a positive non-linear relationship for total biomass (Fig. 11i: R2 = 0.032,
F204 = 4.41, p = 0.0134)
The best LMER model based on AIC values for total plot biomass was the one that used
soil nitrate concentration was the fixed effect and site as the random effect (Table 3: AIC =
745.0). Overall, this model indicates that increases in soil nitrate correspond to a decrease in
23
total plot biomass (R2 = 0.373, χ
2 (1) = 56.2, p =6.52e-14). DSV biomass shows similar results
(Table 3), where there is a negative relationship soil nitrate concentration (AIC = 950.5, R2 =
0.212, χ2 (1) = 63.6, p =1.5e-15).
For the leaf traits, LDMC and SLA had significant non-linear relationships with soil
phosphate concentration (Fig. 6ii and iii). Out of the 5 leaf traits, only SLA was positively
correlated with soil nitrogen concentration (Fig. 8i: R2 = 0.00876, F2834 = 26.0, p = 3.56e-07),
however, after I separated soil nitrogen into its component parts, I found significant trends (Fig.
9, 10, and 11). LDMC has a negative linear relationship with soil nitrate concentration (Fig. 9iii:
R2 = 0.0141, F2694 = 39.6, p = 3.71e-10) and a non-linear relationship with soil ammonia
concentration (Fig. 11ii: R2 = 0.00189, F2833 = 3.69, p = 00.0252). SLA, LCC, and LNC all have
positive relationships with nitrate concentration (R2 = 0.00829, F2694 = 244, p = <2.2e-16; R
2 =
0.0426, F118 = 5.24, p = 0.0238; and R2 =0.0838, F2834 = 10.3, p = 0.00171, for SLA, LCC and
LNC, respectively). SLA also had a positive non-linear relationship with soil ammonia
concentration (Fig. 11iii: R2 = 0.00355, F2833 = 6.05, p = 0.0024).
For the seed traits, seed weight decreased with soil phosphate concentration (Fig. 6iv:
R2 =0.0225, F995 = 23.9, p = 1.17e-06) and increased with soil nitrogen concentration (Fig. 8ii:
R2 = 0.0275, F995 = 3.75, p = 5.33e-02). Seed pod length followed the same pattern for nitrogen
concentration (Fig. 7ii: R2 = 0.007, F995 = 8.02, p = 4.72e-03); however, for soil phosphate, the
data followed a non-linear pattern (Fig. 6v: R2 = 0.0363, F994 = 19.8, p = 3.85e-09). Seed pod
weight was positively related to soil nitrate concentration (Fig. 10ii: R2 = 0.00792, F995 = 9.85, p
= 2.84e-03), and seed pod length showed a positive non-linear relationship for nitrate (Fig. 10iii:
R2 = 0.00461, F994 = 7.49, p = 5.91e-04).
24
Seed weight, which was not log transformed, was significantly correlated with the
various environmental variables when using a univariate LMER model (Table 3), with the fixed
effect soil nitrate concentration being included in the best model (AIC = -135032, R2 = 0.235, χ
2
(5) = 35.4, p =1.23e-06).
2.3.3 Multivariate linear mixed effect models
The best multivariate LMER models for total plot biomass incorporated all four
environmental variables and their interactions and, for DSV biomass included PAR, canopy
cover, and phosphate (Table 4). However, after performing an ANOVA between the multivariate
model and the best performing univariate model, I found no significant difference between the
models for either total plot biomass or DSV biomass.
For both LDMC and SLA, the best fitting multivariate models included all four
environmental variables and the interactions between them (Table 4). For the other leaf traits, I
found that the multivariate model for LCC did not include soil phosphate as a fixed effect (Table
4) and the best model for LNC was the univariate model (Table 3). By examining leaf C:N, I
found that, instead of soil nitrogen, this model used phosphate as a fixed effect (Table 4).
The multivariate models for seed pod weight and length performed better than the
univariate models. However, after comparing the multivariate model to the univariate one using
an ANOVA I did not find a significant difference between the models for seed weight, thus,
overall the univariate model using only soil nitrate was chosen as the best model.
25
2.4 Discussion
Overall, the results of this study demonstrate that this invasive vine exhibits high
intraspecific variation for a suite of traits in response to different environmental conditions. My
first hypothesis, that the morphological traits of DSV exhibit positive growth in response to
greater light availability, is supported. The trait values for DSV change in predictable ways
across the light gradient, demonstrating that DSV responds to light-stress in such a way that it
increases its biomass production to optimize light capture (Valladares and Niinemetes 2008).
Additionally, my second hypothesis, that the morphological traits of DSV exhibit positive
growth in response to greater soil nutrient availability, is supported. Between the two soil
nutrients, it seems that nitrogen, particularly nitrate, appears to play a stronger role in the
distribution of trait values.
2.4.1 Light availability
Biomass production in these forest habitats exhibited strong trends across the light
gradient, where it was positively correlated with photosynthetically active radiation (PAR) (Fig.
4) and negatively correlated with canopy coverage (Fig. 5). The positive relationship with PAR
indicated that, with more light, the plots produced more biomass, which is expected since light
strongly linked to the positive growth of plant species (Kania and Giacomelli 2001). Therefore,
plots with greater light availability had more species that were more densely packed with one
another. As predicted the opposite trend for canopy cover was seen, however, this trend was non-
linear, indicating that there was a sharp decline in biomass production after a certain threshold of
coverage was surpassed. This threshold had been observed in transitional sites. As the distance
26
increased from the forest edge, less plant species were present. In sites that were categorized as
fully understory, much of the canopy cover was greater than 60%; however, there were
differences in the types of trees providing the cover, i.e. mixed deciduous vs pine stands, thus
accounting for the variation shown in the model (Fig. 4).
DSV biomass displayed similar trends as total plot biomass, where it increased with
increasing PAR (Fig. 3) and decreased with increasing canopy cover (Fig. 5). These trends were
expected because, while DSV in lower light conditions grows taller than in full sun conditions, it
decreases in density as canopy coverage increases (DiTommaso et al. 2005) resulting in lower
overall biomass production. Examining SLA and LDMC across the two environmental gradients,
I consistently found that these two traits displayed opposite trends. This pattern may be a result
of the trade-off described by Porter and de Jong (1999), between rapid biomass production (high
SLA and low LDMC) and the efficient conservation of nutrients (low SLA and high LDMC).
Within the understory where PAR is low and canopy cover is high, it appears that DSV exhibits
rapid biomass production as SLA is high and LDMC is low (Fig. 3 and 5). I had predicted this
type of response because DSV expresses many characteristics of a shade-tolerant species, such as
greater stem height and broader leaves to capture limited light (Milbrath 2008). The other leaf
traits did not show as many significant relationships as SLA and LDMC; however, LNC was
negatively correlated with PAR (Fig. 3) and negatively correlated with canopy cover (Fig. 5).
LCC on the other hand, showed the opposite trend for PAR (Fig. 3). The lack of significant
trends in these traits may be due to a sampling issue as only a small subset of plots were examine
for LNC, LCC and C:N.
27
The seed traits of DSV did not respond characteristically to changes in light availability
as seen in other studies (Cappuccino et al. 2002; and DiTomasso et al. 2005). DSV seeds are
polyembryonic, directly affecting its germination and dispersability (Cuppuccino et al. 2002),
which have direct consequences on its spread across a landscape. Previous studies involving light
and seed characteristics demonstrated that DSV seeds in shaded areas weighed more than those
in open area (Ditommaso et al. 2005).The results of this study do not appear to support this
observation as seeds from my study get heavier with greater light availability (Table 3).
However, the trends appear weak enough that they are almost negligible (Table 3). More
apparent trends are exhibit for the seed pod traits, seed pod weight and length, that both show
increases with greater PAR and decreases with canopy cover.
2.4.2 Soil nutrient availability
The response of DSV to a soil nutrient gradient was then examined. This gradient was
particularly focused on phosphorus and nitrogen, because in most terrestrial ecosystems they are
the two main limiting nutrient resources (Vitousek et al. 2010). Phosphorus, measured in the
form of phosphate due to its high reactivity to oxygen, is a vital component for plant metabolism
as it aids with energy transfer within the plant cells (Ticconi and Abel 2004). Overall, this
nutrient influences early plant growth and maturity as it regulates protein synthesis (Rodriguez
and Fraga 1999). Within my study plots, I found that plots with greater soil phosphate tended to
have lower species richness and that there no significant response of plot biomass production to
soil phosphate concentration. The negative relationship for richness may indicate that a dominant
species may be utilizing phosphate more than subdominants, which has been demonstrated in
28
some phosphorus enrichment studies (Elser et al. 2007). However, the lack of a trend for
biomass production makes it difficult to make this conclusion. A possible explanation for this
lack of response is that the nutrient gradient was not large enough; therefore, directly
manipulating this gradient may provide clearer results.
With soil nitrogen, I found a negative trend, where increases in nitrogen resulted in
lower total biomass (Fig. 7). Nitrogen, measured as the sum of both ammonia and nitrate, is also
a vital component for plant growth as it is a major component in the formation of amino acids
and energy transfer compounds such as ATP (Crawford 1995). Therefore, this negative trend
was not expected but may be explained by a trade-off between nitrogen concentration and
optimal ecosystem functioning described by Bai and colleagues (2010). In their study Bai et al
showed that two communities, a mature and degraded community, respond differently to
nitrogen addition. The mature community saw a large reduction in species richness, while the
degraded community there was only a slight reduction in species richness. In my study plots I
did not find a significant relationship for soil nitrogen, in any form, and species richness,
however the negative trend for total biomass is a good indication that plants producing less and
likely functioning to a lesser degree.
DSV biomass followed the same positive trend for soil phosphate concentration (Fig. 6);
however, it was not found to be significantly correlated with soil nitrogen. Once soil nitrogen
was separated into its component parts, DSV biomass was found to be negatively associated with
nitrate concentration, but not with ammonia concentration. Nitrate is generally the preferred form
of nitrogen that plants uptake from the soil (Crawford 1995)).and, therefore, may account for this
difference. The preference for nitrate over ammonia by plants is due to the fact that nitrate is less
29
volatile and more mobile within the soil than the ammonium form and, thus, is easier for plants
to uptake (Crawford 1995).
With the leaf traits, it was found that for phosphate SLA had a negative relationship while
LDMC was positive (Fig. 4). For nitrogen, only SLA was significantly related (Fig. 5); however,
when separated into nitrate and ammonia, I found significant trends for both traits, along with
positive trends for LNC and LCC (Fig 6 and 7). Once again nitrate concentration showed
stronger trends than ammonia. For the seed traits, seed pod weight increased predictably with
soil nitrogen but decreased with soil phosphate concentration. This is most likely a result of the
differences in provisioning resources, as phosphorus promotes root growth so more of the plant
resources may have been sent away from the seeds. Seed pod length increased with both nitrogen
and phosphate, although for phosphate it was a non-linear curve which saturated at higher
concentrations.
2.4.3 Broader Implications
The results of this study indicate that there is a positive correlation between the number
of species present in the plot and the total amount of biomass produced by that plot. This
diversity-productivity relationship is an important and well-studied topic within community
ecology (eg. Tilman et al 2001; Cardinale et al 2007; Cadotte 2013). Community productivity
has been used by a large amount of studies as a basic measure of ecosystem function (Tilman
1997). Similar to other well-studied systems, such as the grassland ecosystems, the positive
relationship seen in this study provides support to the idea that diversity is an important
component for community productivity. One caveat regarding this result is that the greatest
amount of diversity that I observed was in sites that transitioned from forest understory into open
30
fields. This means that my observations were more skewed towards plots that had less species
since many of my sites were primarily understory and not transitional. Thus, despite being
significant, the variance explained by the linear model is quite low (R2 = 0.0247). This finding is
important to consider as ecosystem functioning in understory communities may differ quite
significantly from other ecosystems (Sala et al. 2000). Community assemblage, both in terms of
the number and composition of plant species, within understory communities will mainly be
dependent on whether or not the species are shade-tolerant (Antos 2004) or if that species is
dispersal limited.
Specifically related to DSV biomass, there was a negative trend for species richness,
where an increase in the number of species resulted in a decrease of DSV biomass (Fig 1). This
relationship was non-linear, where DSV biomass declined more sharply than expected from a
linear model when there were more species present. Once again this is an important finding
regarding to a community context as it may provide some indication of the diversity-resistance
hypothesis (Levine and D’Antonio 1999) that supports that idea that more diverse communities
are more competitive in terms of occupied niche space and, therefore, are more likely to resist
invasion
A major limitation of this study is that many of the observational plot were located in the
understory and not in transitional or open areas, thus, caution should be taken when interpreting
these results as the data is heavily skewed towards the understory plots. This results in a weaker
light gradient and lower concentrations of soil nutrients.
Overall, more research that explicitly manipulates these two gradients will be necessary
to better understand more about the underlying mechanisms directing the trait responses. The
31
effect of light on invasiveness has not been as thoroughly studied as there had been a prevalent
view that forests were more difficult to invade, particularly if they were old-growth forests with
less disturbance (Belote et al. 2008). A large focus on the invasiveness of different species has
been centered on early successional species, whose traits are most related to performance, i.e.
rapid growth, early reproduction, and short life span (Baker 1965). These ‘invasive’ traits are
generally not conducive for shade tolerance and, thus, invader response to light stress has not
been examined thoroughly (Martin et al 2008). Overall, most invasive species studied in forest
ecosystems have been invasive tree species such as Rhamnus cathartica or common buckthorn
(Mascaro and Schnitzer 2007). Therefore, more work should be done in assessing which
herbaceous plants are invasive within these low-light systems and what are their effects on the
functioning of these forest ecosystems. In the long term, tree invaders will no doubt play a strong
role but, in the short term, herbaceous species could have a high impact. Species like garlic
mustard (Alliaria petiolate) have been extensively studied and have been shown to have the
ability to invade higher quality forests that have little disturbance (Nuzzo 1999). Additionally,
this species can cause high impacts within forests but inhibiting seedling growth by releasing
allelopathic chemicals into the soil (Wolfe et al. 2008); thus, it is important to begin
documenting and learning more about other potential invasive species to protect forest
ecosystems.
Understanding more about nutrient availability is also vital as it has been shown to
structure a community by influencing both species abundance and richness (Willem et al. 2009)
and can have varying impacts on ecosystem functioning (Graham and Mendelsshon 2015).
Within the context of invasion biology, nutrient availability can contribute significantly to the
success of the invader since it has been shown that nutrient additions may facilitate the growth
32
and spread of non-native species but hinder the growth of native species (Seabloom et al. 2015).
Invasive species seem more likely to take advantage of fluctuations in resources brought about
by disturbance events than native species (Davis et al. 2000), giving them a competitive edge.
Moreover, some studies have demonstrated that invasive species are directly influencing
resource levels, thereby, negatively affecting the native species with which they are competing
(Ehrenfeld 2003).
In either of these cases, light availability or nutrient availability, it is clear that invasive
species are using particular strategies to establish and persist. Learning more about the
underlying mechanisms driving these strategies will be vital as it will help conservationist to
better manage these invaders and protect these communities from future invasions. Therefore,
the study I have conducted with DSV is a step forward in understanding the different strategies
invasive plants may employ in spreading to areas that were initially considered to have lower
invasibility.
33
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38
Tables
Table 2.1: Linear models
Response Variable Predictor variable Estimate Std Error Multiple R^2 Adjusted R^2 F-stat df p-value
Total Plot biomass (log) Richness 1.68386 0.25642 0.4142 0.4084 72.11 204 < 2.2e-16
Richness (^2) -0.10084 0.02677
Total Plot biomass (log) PAR (log) 0.0041284 0.0008464 0.104 0.09962 23.79 205 2.151e-06
Total Plot biomass (log) Canopy Cover 3.50042 0.65648
0.1281 0.1238 30.11 205 1.197e-07 Canopy Cover (^2) -0.05048 0.00920
Total Plot biomass (log) Nitrate (log) -0.39172 0.15296 0.03286 0.02785 6.558 193 0.0112
Total Plot biomass (log) Ammonia -0.390072 0.163790
Ammonia (^2) 0.013795 0.007244 0.0414 0.032 4.405 204 0.0134
Total Plot biomass (log) Nitrogen (log) -0.8329 0.3202 0.03196 0.02724 6.768 205 0.009958
DSV Biomass (log) Richness -0.62049 0.18481
0.07656 0.0694 10.69 258 3.45E-05 Richness (^2) 0.04815 0.02163
DSV Biomass (log) PAR (log) 0.3945 0.1053 0.05142 0.04776 14.04 259 0.0002206
DSV Biomass (log) Canopy Cover 0.1186935 0.0355156
0.1752 0.1688 27.41 258 1.61E-11 Canopy Cover (^2) -0.0015333 0.0003324
DSV Biomass (log) Phosphate 0.14291 0.03784 0.05221 0.04855 14.27 259 0.0001969
DSV Biomass (log) Nitrate (log) -0.3428 0.1086 0.03907 0.03515 9.962 245 0.001798
Leaf dry matter content (log) PAR (log) 0.048773 0.002303 0.1366 0.1363 448.5 2834 <2.2e-16
Specific leaf area (log) PAR (log) -0.154842 0.004602 0.2454 0.2852 1132 2834 <2.2e-16
Leaf Nitrogen Content (log) PAR (log) -0.07812 0.01826 0.1343 0.1269 18.3 118 3.86E-05
Leaf Carbon Content (log) PAR (log) 0.005281 0.001789 0.0688 0.06091 8.718 118 0.003802
Leaf dry matter content (log) Canopy Cover 3.48E-03 7.94E-04
0.1997 0.1991 353.4 2833 <2.2e-16 Canopy Cover (^2) -7.13E-05 7.35E-03
Specific leaf area (log) Canopy Cover 5.79E-03 1.49E-03
0.413 0.4126 996.6 2833 <2.2e-16 Canopy Cover (^2) 7.44E-05 1.38E-05
Leaf Nitrogen Content (log) Canopy Cover 9.93E-03 1.25E-03 0.3494 0.3438 63.36 118 1.19E-12
39
Table 2.1: cont.
Response Variable Predictor variable Estimate Std Error Multiple R^2 Adjusted R^2 F-stat df p-value
Leaf dry matter content (log) Phosphate 9.51E-03 6.40E-03 0.005703 0.005703 9.13 2833 0.0001115
Phosphate (^2) -8.96E-04 2.10E-04
Specific leaf area (log) Phosphate -5.52E-02 5.32E-03 0.03687 0.03619 54.22 2833 <2.2e-16
Phosphate (^2) 4.23E-03 4.55E-04
Specific leaf area (log) Nitrogen 5.15E-03 1.01E-03 0.009106 0.008756 26.04 2834 3.56E-07
Leaf dry matter content (log) Nitrate (log) -1.52E-02 2.42E-03 0.01447 0.01411 39.56 2694 3.71E-10
Specific leaf area (log) Nitrate (log) 7.91E-02 5.08E-03 0.08292 0.08258 243.6 2694 <2.2e-16
Leaf Carbon Content (log) Nitrate 1.53E-03 6.70E-04 0.04255 0.03443 5.244 118 0.02381
Leaf Nitrogen Content (log) Nitrate (log) 6.26E-02 1.95E-02 0.08376 0.07565 10.33 113 0.001706
Leaf dry matter content (log) Ammonia 5.67E-03 2.50E-03 2.60E-03 0.001891 3.685 2833 0.02522
Ammonia (^2) -2.84E-04 1.10E-04
Specific leaf area (log) Ammonia -9.98E-03 5.48E-03 0.004251 0.003548 6.047 2833 0.002395
Ammonia (^2) 6.10E-04 2.42E-04
Pod weight PAR 3.76E+00 9.06E-06 0.01698 0.01599 17.19 995 3.67E-05
Pod weight Canopy Cover -3.51E-04 1.02E-04 0.01184 0.01085 11.93 995 0.0005771
Pod length (log) PAR (log) 1.77E-02 1.67E-02 0.01769 0.0167 17.92 995 2.52E-05
Pod length (log) Canopy Cover -1.33E-03 4.26E-04 9.75E-03 8.75E-03 9.796 995 1.80E-03
Pod weight phosphate -2.60E-03 5.31E-04 0.02348 0.0225 23.93 995 1.17E-06
Pod weight Nitrogen 5.18E-04 2.68E-04 0.00375 0.002749 3.745 995 5.33E-02
Pod length (log) Phosphate 8.78E-03 5.93E-03 0.03824 0.0363 19.76 994 3.85E-09
Phosphate (^2) -1.83E-03 5.03E-04
Pod length (log) Nitrogen (log) 3.65E-02 1.29E-02 0.007998 0.007001 8.022 995 4.72E-03
Pod weight Nitrate 1.63E-03 5.44E-04 0.008919 0.007923 8.954 995 2.84E-03
Pod length (log) Nitrate 2.37E-02 6.38E-03 0.01485 0.01287 7.49 994 5.91E-04
Nitrate (^2) -1.59E-03 5.14E-04
Pod length (log) Ammonia (log) 3.37E-02 1.42E-02 0.005607 0.004608 5.611 995 1.80E-02
40
Table 2.2: Univariate linear mixed effect models
Random intercept
Random slope
Random effects (Std.Dev) Fixed effects
Marginal R^2
Conditional R^2
Chi square Chi df
Response Variable
Site Transect Residual Predictor variable Estimate Pr(>Chiq) AIC
Plot biomass (log) site 0.3141 0.9138 PAR (log) 0.2785 5.41E-02 4.30E-01 38.378 2 4.64E-09 766.8466
Plot biomass (log)
site 0.175
0.9582 Phosphate 0.03051 4.08E-03 4.91E-01 7.1733 3 0.06657 798.0633
Plot biomass (log) site and transect 0.55754 0.07181 0.92105 Canopy cover -0.03627 1.76E-01 4.00E-01 44.264 1 2.87E-11 758.9611
Plot biomass (log) site 0.7397 0.9676 Nitrate (log) -0.1028 7.15E-03 3.73E-01 56.208 1 6.52E-14 745.0286
Plot biomass (log) site 0.435 0.9754 Ammonia (log) -0.1847 4.20E-03 3.82E-01 9.5525 3 2.28E-02 795.6842
DSV biomass (log) site 0.743 1.583 PAR (log) 0.304 3.03E-02 2.05E-01 7.5356 1 6.05E-03 1006.609
DSV biomass (log) site
0.6227
1.5783 Canopy cover -0.03122 6.13E-02 1.88E-01 12.34 1 4.43E-04 1001.805
DSV biomass (log) site 0.7832 1.5705 Nitrate (log) -0.219 1.57E-02 2.12E-01 63.637 1 1.50E-15 950.508
DSV biomass (log) site 0.8151 1.6017 Ammonia (log) 0.0006676 2.15E-06 2.06E-01 2.00E-04 0 <2.2e-16 1014.145
Leaf Nitrogen content (log)
site 0.1719
0.1557 PAR (log) -0.0505 5.74E-02 4.48E-01 13.104 3 4.42E-03 -67.69441
Leaf Nitrogen content (log)
site 0.26033
0.14349 Phosphate -0.01339 1.79E-02 6.89E-01 15.889 3 1.20E-03 -70.4743
Leaf Nitrogen content (log) site and transect 0.10357 0.02264 0.1382 Canopy cover 0.009508 3.22E-01 5.73E-01 45.703 1 1.38E-11 -102.2927 Leaf Nitrogen content (log) site 0.13647 0.15615 Nitrate (log) 0.0746 1.21E-01 4.93E-01 10.205 1 1.40E-03 -68.7945
Leaf Carbon content (log) site and transect 0.049464 0.021492 0.015552 PAR (log) 0.008254 1.24E-01 5.53E-01 16.768 5 4.96E-03 -611.7087
Leaf Carbon content (log) site and transect 0.0077 0.006887 0.017153 Nitrate 0.001673 4.81E-02 3.01E-01 4.9473 1 2.61E-02 -607.8877
Carbon Nitrogen ratio (log)
site 0.16554
0.1481 PAR (log) 0.05537 7.29E-02 4.72E-01 15.67 3 1.33E-03 -78.05168
Carbon Nitrogen ratio (log)
site 0.26265
0.13565 Phosphate 0.01631 2.62E-02 7.26E-01 17.907 3 0.0004598 -81.17068
Carbon Nitrogen ratio (log) site and transect 0.09979 0.02102 0.13064 Canopy cover -0.009511 3.44E-01 5.92E-01 50.18 1 1.40E-12 -115.4444
Carbon Nitrogen ratio (log) site 0.1315 0.1511 Nitrate (log) -0.07476 1.15E-01 5.08E-01 9.2962 1 2.30E-03 -76.56041
41
Table 2.2: cont.
Random intercept
Random slope
Random effects (Std.Dev) Fixed effects
Marginal R^2
Conditional R^2
Chi square Chi df
Response Variable Site Transect Residual
Predictor variable Estimate Pr(>Chiq) AIC
Leaf dry matter content (log)
site and transect 0.13487 0.04261 0.1117 PAR (log) 0.04323 1.04E-01 3.16E-01 378.16 5 <2.2e-16 -4279.666
Leaf dry matter content (log)
site and transect 0.150105 0.0166 0.11555 Phosphate (log) 0.02645 2.08E-02 4.95E-01 180.7 5 <2.2e-16 -4082.209
Leaf dry matter content (log)
site and transect 0.265729 0.0625332 0.1097485 Canopy cover -0.00724 3.73E-01 5.38E-01 482.79 5 <2.2e-16 -4385.55
Leaf dry matter content (log)
site and transect 0.09389 0.06536 0.11861 Nitrogen (log) 0.005596 3.85E-04 2.40E-01 42.725 5 4.20E-08 -3944.231
Leaf dry matter content (log) site transect 0.071702 0.009454 0.1187999 Nitrate -0.01143 4.11E-02 3.30E-01 37.61 3 3.42E-08 -3943.115
Leaf dry matter content (log)
site and transect 0.08217 0.09231 0.11791 Ammonia (log) 0.007228 5.48E-04 2.36E-01 75.624 5 6.89E-15 -3977.13
Specific leaf area (log)
site and transect 0.20837 0.08766 0.21073 PAR (log) -0.1034 1.50E-01 3.84E-01 816.72 5 <2.2e-16 -683.339
Specific leaf area (log)
site and transect 0.49091 0.05138 0.22281 Phosphate -0.01512 9.55E-04 7.37E-01 461.51 5 <2.2e-16 -328.1324
Specific leaf area (log) transect site 1.07278 0.03183 0.19722 Canopy cover 0.01872 4.22E-01 7.48E-01 1181.4 3 <2.2e-16 -1052.028
Specific leaf area (log)
site and transect 0.3415 0.158 0.2359 Nitrogen (log) -0.02113 1.03E-03 4.35E-01 152.9 5 <2.2e-16 -19.51822
Specific leaf area (log)
site and transect 0.15046 0.01473 0.02822 Nitrate (log) 0.02822 1.03E-02 3.63E-01 330.5 5 <2.2e-16 -197.1163
Specific leaf area (log)
site and transect 0.29896 0.15977 0.23526 Ammonia (log) -0.01363 3.76E-04 4.13E-01 170.27 5 <2.2e-16 -36.88827
Seed weight site transect 0.0008587 0.0007008 0.0034183 Ammonia (log) 2.86E-04 6.17E-02 10.254 3 0.01653 -135010.6
Seed weight
site and transect 3.24E-04 2.16E-05 3.41E-03 Nitrate 0.0001412 1.07E-02 2.35E-01 35.443 5 1.23E-06 -135031.8
Seed weight transect site 2.64E-04 8.016-05 3.42E-03 Nitrogen (log) 2.77E-04 6.09E-02 9.0581 3 0.02853 -135009.4
Seed weight
site and transect 0.001726 0.0001635 0.0034156 Phosphate (log) 5.41E-03 1.23E-01 28.315 5 3.16E-05 -135024.7
Seed weight site transect 0.0008814 0.0005541 0.0034182 PAR (log)
4.98E-04 6.40E-02 12.872 3 0.004922 -135013.3
Seed weight
site and transect 1.49E-03 3.44E-04 3.42E-03 Canopy cover 1.07E-03 3.93E-02 22.589 5 4.04E-04 -135018
42
Table 2.2: cont.
Random intercept
Random slope
Random effects (Std.Dev) Fixed effects
Marginal R^2
Conditional R^2
Chi square Chi df
Response Variable Site Transect Residual
Predictor variable Estimate Pr(>Chiq) AIC
Seed pod weight site transect 2.99E-02 1.12E-02 4.15E-02 Canopy cover 5.76E-03 3.58E-01 9.346 3 0.02503 -3453.362
Seed pod weight
site and transect 5.72E-02 5.31E-03 4.05E-02 PAR (log) 0.01176 4.25E-02 4.32E-01 39.299 3 1.68E-07 -3479.768
Seed pod weight
site and transect 2.86E-02 4.36E-03 4.05E-02 Nitrate
5.67E-02 5.85E-01 29.565 5 1.80E-05 -3469.581
Seed pod weight
site and transect 5.93E-02 9.50E-03 4.08E-02 Phosphate 4.44E-02 5.55E-01 16.055 5 6.69E-03 -3456.071
Pod length (log) transect site 0.27111 0.01141 0.14741 PAR (log) 0.14741 1.05E-02 4.77E-01 29.952 3 1.41E-06 -903.0646
Pod length (log) transect site 0.06089 0.01342 0.15021
Phosphate (log) -0.0405 3.68E-02 4.11E-01 18.662 3 0.0003211 -891.7743
Pod length (log) transect site 0.301139 0.00807 0.149905 Canopy cover 0.001613 1.26E-02 5.17E-01 17.466 3 0.0005668 -890.5784
Pod length (log) site transect 0.140851 0.019918 0.149274 Nitrate 0.007296 9.69E-03 4.87E-01 16.154 3 0.001054 -889.2663
Pod length (log) site transect 0.14595 0.11111 0.14979 Ammonia (log)
-0.004804 1.05E-04 4.97E-01 8.8613 3 0.03119 -881.9736
43
Table 2.3: Multivariate linear mixed effect models
Response Variable Random effects (Std.Dev)
Fixed effects Marginal
R^2 Conditional
R^2 Chi
square Chi df Site Transect Residual Pr(>Chiq) AIC
Plot biomass (log) 0.4961 0.9127
tree.cov + par + phosphate + N_sum + tree.cov:phosphate + tree.cov:N_sum + par:N_sum + phosphate:N_sum + tree.cov:phosphate:N_sum 2.36E-01 4.10E-01 60.701 9 9.82E-10 756.5359
DSV Biomass (log) 0.4601 1.5721 par + phosphate + tree.cov + par:tree.cov 1.31E-01 2.00E-01 22.3 4 1.75E-04 997.8451
Leaf Carbon content (log) 0.006222 0.018252 par + N_sum + tree.cov + par:N_sum + par:tree.cov 1.11E-01 2.03E-01 14.872 5 1.09E-02 -603.9607
Leaf carbon nitrogen ratio (log)
0.09198 0.12938
par + phosphate + tree.cov + par:phosphate + par:tree.cov + phosphate:tree.cov + par:phosphate:tree.cov 3.75E-01 5.85E-01 61.705 7 6.89E-11 -116.9689
Specific leaf area (log)
0.08272 0.02027 0.19719
par + phosphate + N_sum + tree.cov + par:phosphate + par:N_sum + phosphate:N_sum + par:tree.cov + phosphate:tree.cov + N_sum:tree.cov + par:phosphate:N_sum + par:phosphate:tree.cov + par:N_sum:tree.cov + phosphate:N_sum:tree.cov + par:phosphate:N_sum:tree.cov 4.59E-01 5.44E-01 1239.4 15 <2.2e-16 -1085.987
Leaf dry matter content (log)
0.04495 0.00775 0.10924
par + phosphate + N_sum + tree.cov + par:phosphate + par:N_sum + phosphate:N_sum + par:tree.cov + phosphate:tree.cov + N_sum:tree.cov + par:phosphate:N_sum + par:phosphate:tree.cov + par:N_sum:tree.cov + phosphate:N_sum:tree.cov + par:phosphate:N_sum:tree.cov 2.58E-01 3.68E-01 557.34 15 <2.2e-16 -4438.842
Seed weight
0.0009318 NA 0.0034176
par + phosphate + N_sum + tree.cov + par:phosphate + par:N_sum + par:tree.cov + phosphate:tree.cov + N_sum:tree.cov + par:phosphate:tree.cov + par:N_sum:tree.cov 2.73E-03 7.17E-02 36.465 11 1.42E-04 -135021.1
Seed pod weight
0.26131 0.05577 0.3624
par + phosphate + N_sum + tree.cov + par:phosphate + par:N_sum + phosphate:N_sum + par:tree.cov + phosphate:tree.cov + N_sum:tree.cov + par:phosphate:N_sum + par:phosphate:tree.cov + par:N_sum:tree.cov + phosphate:N_sum:tree.cov + par:phosphate:N_sum:tree.cov 4.60E-02 3.83E-01 61.527 15 1.38E-07 -3481.544
Seed pod length (log)
0.14318 0.01459 0.14879
par + phosphate + N_sum + tree.cov + par:phosphate + par:N_sum + phosphate:N_sum + par:tree.cov + phosphate:tree.cov + N_sum:tree.cov par:phosphate:N_sum + par:phosphate:tree.cov + par:N_sum:tree.cov + + phosphate:N_sum:tree.cov + par:phosphate:N_sum:tree.cov 4.38E-02 5.06E-01 43.906 15 1.14E-04 -893.0184
44
Figures
0 200 400 600 800
0.0
0.5
1.0
1.5
2.0
Photosynthetically Active Radiation (log)
Num
ber
of
specie
s (
log)
20 40 60 80
0.0
0.5
1.0
1.5
2.0
Canopy CoverN
um
ber
of
Specie
s (
log)
0 5 10 15
0.0
0.5
1.0
1.5
2.0
Soil Phosphate Concentration
Num
ber
of
specie
s (
log)
Fig. 2.1: The relationship between species richness and the environmental gradients, and. i)
PAR: R2 = 0.0272, F269 = 8.55, p = 0.00375; ii) Canopy cover: R
2 = 0.0887, F268 = 14.13, p =
1.46e-06; and, iii) Phosphate: R2 = 0.0424, F269 = 13.0, p = 0.0038
i
iii
ii
45
2 4 6 8 10
-6-4
-20
24
Number of species
To
tal p
lot
bio
ma
ss (
log
)
2 4 6 8 10-4
-20
24
Number of species
DS
V B
iom
ass (
log
)
Fig. 2.2: The relationship between species richness and the biomass measurements. i) Total plot
biomass: R2 = 0.408, F204 = 73.1, p = <2.2e-16; and, ii) DSV biomass: R
2 = 0.0766, F258 = 10.7, p
= 3.45e-05.
i ii
46
2 3 4 5 6 7
-40
24
Photosynthetically active radiation (log)
DS
V B
iom
ass (
log)
2 3 4 5 6 7
4.5
5.0
5.5
6.0
Photosynthetically active radiation (log)
Leaf D
ry M
atter
Conte
nt (log)
2 3 4 5 6 7
2.5
3.5
4.5
Photosynthetically active radiation (log)
Specifi
c L
eaf A
rea (
log)
2 3 4 5 6
0.8
1.2
1.6
Photosynthetically active radiation (log)
Leaf N
itrogen C
onte
nt (log)
2 3 4 5 6
3.7
63.8
03.8
4
Photosynthetically active radiation (log)
Leaf C
arb
on C
onte
nt (log)
2 3 4 5 6 7
3.0
3.5
4.0
Photosynthetically active radiation (log)
Seed P
od L
ength
Fig. 2.3: The relationship between various plant traits and log transformed photosynthetically
active radiation. i) DSV Biomass: R2 = 0.0478, F259 = 14.0, p = 0.00022; ii) Leaf dry matter
content: R2 = 0.136, F2834 = 449, p = <2.2e-16; iii) Specific leaf area: R
2 = 0.285, F2834 = 1132, p
= <2.2e-16; iv) Leaf nitrogen content: R2 = 0.127, F118 = 18.3, p =3.86e-05; v) Leaf carbon
content: R2 = 0.0688, F118 = 8.78, p = 0.0038; and, vi) Seed pod length: R
2 =0.0167, F995 = 17.9,
p = 2.52e-05
i
iii
ii
iv
v vi
47
0 200 600 1000
-6-4
-20
24
Photosynthetically Active Radiation
To
tal p
lot
bio
ma
ss (
log
)
0 200 600 1000
0.0
50
.15
0.2
5
Photosynthetically active radiation
Se
ed
Po
d W
eig
ht
Fig. 2.4: The relationship between various plant traits and photosynthetically active radiation. i)
Total plot biomass: R2 = 0.01, F205 = 23.8, p = 2.15e-06; ii) Seed pod weight: R
2 = 0.016, F995 =
17.2, p = 3.67e-05
i ii
48
Fig. 2.5: The relationship between various plant traits and canopy cover. i) Total plot biomass:
R2 = 0.124, F205 = 30.1, p = 1.2e-07; ii) DSV Biomass: R
2 = 0.169, F259 = 27.41, p = 1.61e-11;
iii) LDMC R2 = 0.199, F2833 = 353, p = <2.2e-16; iv) SLA: R
2 = 0.413, F2833 = 997, p = <2.2e-16;
v) LNC: R2 = 0.344, F118 = 63.4, p = 1.19e-12; vi) Seed pod weight: R
2 = 0.0109, F995 = 11.9, p
=0.000577; and, vii) Seed pod length: R2 = 8.75e-03, F995 = 9.8, p = 1.8e-03
i
iii
ii
iv v
vi vii
49
Fig. 2.6: The relationship between various plant traits and soil phosphate concentration. i) DSV
biomass: R2 = 0.0486, F259 = 14.3, p = 0.0002; ii) LDMC: R
2 = 0.0057, F2833 = 9.13, p =
0.000112; iii) SLA: R2 = 0.03619, F2834 = 54.2, p = <2.2e-16; iv) Seed pod weight: R
2 =0.0225,
F995 = 23.9, p = 1.17e-06; and, v) Seed pod length: R2 = 0.0363, F994 = 19.8, p = 3.85e-09
i
iii ii
iv v
50
1.0 1.5 2.0 2.5 3.0 3.5
-6-4
-20
24
Soil Nitrogen Concentration (log)
To
tal p
lot
bio
ma
ss (
log
)
1.0 1.5 2.0 2.5 3.0 3.5
3.0
3.5
4.0
Soil Nitrogen Concentration (log)S
ee
d P
od
Le
ng
th(l
og
)
Fig. 2.7: The relationship between various plant traits and log transformed soil nitrogen
concentration. i) Total plot biomass: R2 = 0.0272, F205 = 6.77, p = 0.01; and, ii) Seed Pod Length:
R2 = 0.007, F995 = 8.02, p = 4.72e-03
i ii
51
5 10 15 20 25 30
2.5
3.5
4.5
Soil Nitrogen Concentration
Sp
ecific
Le
af
Are
a
5 10 15 20 25 30
0.0
50
.15
0.2
5Soil Nitrogen Concentration
Se
ed
Po
d W
eig
ht
Fig. 2.8: The relationship between various plant traits and soil nitrogen concentration. i) SLA: R2
= 0.00876, F2834 = 26.0, p = 3.56e-07; and, ii) Seed pod weight: R2 = 0.0275, F995 = 3.75, p =
5.33e-02
i ii
52
-3 -2 -1 0 1 2
-6-2
02
4
Soil Nitrate Concentration (log)
Tota
l plo
t bio
mass (
log)
-3 -2 -1 0 1 2 3
-40
24
Soil Nitrate Concentration (log)
DS
V B
iom
ass (
log)
-3 -2 -1 0 1 2 3
4.5
5.0
5.5
6.0
Soil Nitrate Concentration (log)
Leaf D
ry M
atter
Conte
nt (log)
-3 -2 -1 0 1 2 3
2.5
3.5
4.5
Soil Nitrate Concentration (log)
Specifi
c L
eaf A
rea (
log)
-2 -1 0 1 2
0.8
1.2
1.6
Soil Nitrate Concentration (log)
Leaf N
itrogen C
onte
nt (log)
Fig. 2.9: The relationship between various plant traits and log transformed soil nitrate
concentration. i) Total plot biomass: R2 = 0.0279, F193 = 6.56, p = 0.0112; ii) DSV biomass: R
2 =
0.0312, F259 = 9.96, p = 0.0018; iii) LDMC: R2 = 0.0141, F2694 = 39.6, p = 3.71e-10; d) SLA: R
2
= 0.00829, F2694 = 244, p = <2.2e-16; iv) LNC: R2 =0.0838, F2834 = 10.3, p = 0.00171
i
iii
ii
iv
v
53
0 2 4 6 8 10 12 14
3.7
63.8
03.8
4
Soil Nitrate Concentration
Leaf
Carb
on C
onte
nt
(log)
0 5 10 15
0.0
50.1
50.2
5
Soil Nitrate Concentration
Seed P
od W
eig
ht
0 5 10 15
3.0
3.5
4.0
Soil Nitrate Concentration
Seed P
od L
ength
(lo
g)
Fig. 2.10: The relationship between various plant traits and soil nitrate concentration. i) LCC,
with non- transformed nitrate concentration: R2 = 0.0426, F118 = 5.24, p = 0.0238 ii) Seed pod
weight: R2 = 0.00792, F995 = 9.85, p = 2.84e-03; and, iii) Seed pod length: R
2 = 0.00461, F994 =
7.49, p = 5.91e-04
i
iii
ii
54
Fig. 2.11: The relationship between plant traits and soil ammonia concentration. i) Total plot
biomass: R2 = 0.032, F204 = 4.41, p = 0.0134; ii) LDMC: R
2 = 0.00189, F2833 = 3.69, p = 0.00252;
and, iii) SLA: R2 = 0.00355, F2833 = 6.05, p = 0.0024
i
iii
ii
55
Appendix
Table 2.A1: Measured morphological traits
Measurement Abbreviation Calculation Unit
Specific leaf area SLA
mm2 mg-1
Leaf dry matter content LDMC
mg g-1
Leaf nitrogen content LNC
Leaf carbon content LCC
Leaf carbon-nitrogen ratio C:N
Aboveground biomass
g
Seed weight
g
Seed pod weight
g
Seed pod length
mm
56
Fig. 2.A2: Site map of the Rouge National Urban Park
Fig. 2.A3: i) Residuals vs Fitted for Total biomass and canopy coverage. Cone shape in the
residuals indicates heteroscedasticity; and ii) QQ plot, curve indicates left skewness in data
i ii
57
Chapter 3 Quantifying phenotypic plasticity and assessing the response to
defoliation in the morphological traits of the invasive vine Vincetoxicum rossicum
3.1 Introduction
One prevalent hypothesis regarding the cause of invasive success has been that invasive
species have broader niches than either non-invasive species or native species. Two hypotheses
related to the broadness of an invasive species niche breadth include Baker’s (1965) niche
breadth–invasion success hypothesis and the enemy release hypothesis (Keane and Crawley
2002).
The first hypothesis, niche breadth–invasion success, can be examined the realized niche
of the invasive species in both its native range and in the introduced range (Vazquez 2006).
Some studies have shown that there is a correlation between these two regions (Hierro et al.
2004), where the characteristics of species in the native range can be used to predict the future
geographical distributions within the introduced range (Peterson 2003). In some studies, it has
been shown that an invasive species has a wide geographical range in its native habitat as well as
the introduced range (Goodwin et al. 1999). The wide geographical distributions of these
species may be a result of the underlying genetic variability of the populations (Bossdorf et al.
2005). This genetic variability could be a result of multiple introduction events, which supply the
population with novel genetic material (Dlugosch and Parker 2008), or through years of
adaptation and evolution, given that the species has been present in the introduced range for a
substantial amount of time (Bossdorf et al. 2005).
58
In the latter case, if there had been a lack of introduction events, the species could
potentially evolve a strategy to be more plastic with certain functional traits (Sultan 2000).
Phenotypic plasticity is an organism’s ability to express different phenotypes in response to
different environments or different biotic interactions, given a particular genotype (Davidson et
al. 2011). Plasticity has been proposed to contribute to invasion success because it contributes to
four invasiveness factors: population persistence over time; high local abundance; successful
colonization of new areas; and a wide geographic range (Sakai et al. 2001). These factors
influence how the invasive species responds to, and later influences, other species within its new
introduced range. Plasticity may enhance ecological niche breadth, allowing an invader to
express advantageous phenotypes in a broader range of environments (Richards et al. 2006).
This means that the invader could potentially have a wide geographic distribution because it is
not as limited by environmental conditions such as climate (Hulme 2008). Plasticity could
facilitate the persistence of populations despite environmental fluctuations (Hulme 2008).
Plasticity could allow an invader to quickly respond to environmental fluctuations or variability,
meaning it could potentially facilitate future colonization in novel environments since the
invader would be able to quickly respond to the different environmental conditions (Hulme
2008). For high local abundance of the invader, there may be a trade-off between the degree of
plasticity and average abundance. This is because less plastic species attain greater abundance at
optimum conditions than more plastic species (Hulme 2008).
The second hypothesis proposed to affect the broadness of an invader’s niche is the
enemy release hypothesis, widely cited as contributing largely to invasion success (Colautti et al.
2004, Richardson and Pysek 2008). In this case, during the process of introduction, the co-
evolved enemies of the introduced species, such as specialized herbivores or predators or other
59
competitors, are not transported along with the introduced species of interest. The introduced
species is ‘released’ and no longer regulated as it would normally be, meaning that it could
potentially be able to compete better against native species because less resources need to be
allocated towards defensive structures (Colautti et al. 2004, Richardson and Pysek 2008). The
potential outcome of the lack of competitive interactions lead to the expansion of the invader’s
niche (Niche expansion hypothesis – Gidoin et al. 2015). Another potential consequence of this
‘release’ is the evolution of increased competitive ability (EICA), where the plant reallocates
resources away from defensive structures to competitive ones, thus, increasing the competitive
ability in relation to native species (Blossey and Notzold 1995). Examples of competitive traits
include novel weapons such as allelopathic chemicals (Novel weapons hypothesis – Callaway
and Ridenour 2004), which have been shown to impair native plant growth (Prati and Bossdorf
2004). Additionally, this lack of population regulation can potentially lead to the expansion of
the invasive species’ niche breadth in the introduced range in comparison to the native range
(Lack 1969; and Gidoin et al. 2015).
To examine these two niche-related hypotheses I assessed the response of the invasive
species Vincetoxicum rossicum to two different light conditions and three different levels of
defoliation. Vincetoxicum rossicum, or Dog-Strangling Vine (DSV), is the ideal study species to
use in this type of assessment for two reasons. First, it is a rare understory species in its native
range but, within North America, it is broadly distributed over a variety of environments
(DiTommaso et al. 2005), therefore it either has a great deal of genetic variability or has evolved
to be more plastic to take advantage of the different environments. Second, in the introduced
range, DSV has no naturally occurring enemies. While in its native range there are several
enemies that feed on DSV including a specialist herbivore called Hypena opulenta (Hazlehurst et
60
al. 2012), a moth that has been approved as a biological control agent in Canada (Casagrande et
al. 2012). The aim of this study will be to directly test if DSV exhibits plasticity by quantifying
the morphological trait response of DSV to changes in light availability and defoliation.
Using a common garden experiment I will address two hypotheses. First, the
morphological traits of DSV will exhibit variability when moved from full sun to full shade
conditions. Specifically, I expect the stem height and specific leaf area of the plants grown in the
shade conditions to be greater than those in the sun conditions. Second, DSV will show negative
growth responses when experiencing a greater degree of defoliation, especially when examining
total biomass.
3.3 Methods and Materials
3.31 Study Site and Experimental Design
The greenhouse study was conducted at the University of Toronto Scarborough campus (UTSC),
Scarborough, Ontario (Refer to Appendix for map). The experiment started in spring 2015,
600.3x0.3x1m enclosures were built using wood. Thirty enclosures were covered with a light
blue sheer fabric and the remaining enclosures were covered in white sheer fabric (Appendix
Fig. A2).
All the enclosures were placed on the top of the UTSC Science Building; in groups of 10 the
enclosures set on the roof and were weighed down by rocks to avoid being blown over by the
wind. Within the group of 10, the enclosures were a minimum of 0.3m away from each other,
among the 6 groups of 10 enclosures there was at least 1m of space. The groups were organized
61
into three individual blocks, 10 blue and 10 white enclosures were in each block. The groups of
blue enclosures were additionally covered in green landscaping mesh to create a stronger shading
effect. Thirty planted pots of DSV from the “Open” treatment (see Plant Sampling) were
randomly placed into the thirty white enclosures and thirty planted pots of DSV from the
“Closed” treatment were randomly placed into the thirty blue enclosures.
3.3.2 Plant Sampling
In the summer of 2015, during the week of June 6 – 12, DSV roots were collected from three
of12 field sites in the Rouge Urban National Park. These sites were chosen because they had
very distinct light gradients as defined by forest canopy coverage. At these sites, roots were
collected from “Sun” areas were canopy cover ranged from 5-20% and from “Shade” areas with
canopy coverage ranging from 75-90%. Individual root bulbs from these areas were separated
and planted in 6 inch flower pots. Generally, 3-4 root blubs were planted using standard potting
soil, with a minimum of 10 pots and a maximum of 20 pots being planted from each cover type.
From each field site, a minimum of 10 pots were planted with roots from the sun areas and
another 10 were planted with roots from shade areas. These pots were then placed behind the
UTSC Science building and separated into two different light treatments labelled “Open” or
“Closed”. In the open treatment, the pots were placed in full sun and the closed treatments were
covered with dark green landscaping mesh to simulate full shade. After a two month growing
period, five of the healthiest pots were chosen from each cover and light treatment, resulting in
60 pots in total to be used in the experiment. Pots from the open treatment were labelled from 1-
62
30, and pots from the closed treatment were labelled 31-60. Using these numbers I determined
pot placement using a random number generator.
In addition to the light treatment I used a defoliation treatment. Originally, I planned to cause
natural defoliation using the biological control agent Hypena opulenta, however, due to rearing
issues (see Biological Control), I used artificial defoliation. Prior to the defoliation treatment, for
each pot, I counted the number of stems that were greater than 10cm in height and determined
their height using a meter stick. Additionally, I determined the stem width for each individual
stem and the number of leaves on that stem.
On Aug 6, 2015, which is designated as Day 60 of the experiment, I randomly applied an
artificial defoliation treatments consisting of 0, 25, or 75% removal to 10 pots using a random
number generator, for each light treatment (open/closed). As stem density was not controlled in
this experiment, the proportion of leaves removed was determined by counting the total number
of leaves in each pot and then multiplying that total by 0, 0.25, or 0.75. Therefore, the number of
leaves removed was done at a pot-level, not an individual level. Leaves were removed randomly
using scissors and were collected and placed in the freezer to be analyzed later for specific leaf
area (SLA) and leaf dry matter content (LDMC). See Chapter 2, Appendix Table A2.1 for
information on measurements. After the defoliation treatment all of the pot were placed in their
designated enclosure and placed on the roof of the UTSC Science building. Pots were watered
every second day, however, if the pots appeared to be dry they were watered more frequently.
Overall, there were 12 different treatment types that differed by location of root collection, light
availability, and percentage of defoliation. Each of these treatment types were replicated 5 times.
63
The experiment ended on Sept 15, 2015’ which is designated as Day 100 of the experiment. On
that day, I collected all above ground biomass from each pot. Before placing the biomass in the
standing oven, the height of each stem was determined and five mature leaves were collected.
These leaves were later processed for SLA and LDMC.
3.3.3 Biological Control
A guide that was outlined by Miller, Tewksbury and Casagrande at the University of Rhode
Island Biological Control lab (Feb 2014) was used for rearing Hypena opulenta from larvae to
adults. Briefly, at the beginning of May 2015, 50 pupae that were stored from the previous
summer were removed from the 4°C fridge and placed in a 25’C growth chamber. After 2-3
weeks, 15 adults emerged from pupae and were placed in two oviposition cages with a pot of
DSV that had been grown for two weeks. In the cages, we attempted to have a ratio of 2 females
to 1 male; however the lack of viable males made this difficult so we had a 3:1 ratio. By the
beginning of June, the Hypena had begun to lay eggs and by mid-June the eggs were hatching.
When larvae had reached 3rd
instar, they were transferred to smaller clear plastic containers and
constantly fed stalks of DSV that were collected from behind the UTSC Science Wing for 2-3
weeks. Approximately 175 larvae successfully reached the 5th
instar stage and, of those
successful larvae, 160 successfully pupated by mid-late July. Pupae were then sexed and placed
into smaller containers with sterilized vermiculite.
Despite being a multivoltine species, our first generation population of Hypena did not emerge
from the pupal stage and we believe they actually began to diapause. Little is known about the
ecology of this species, thus, we are currently unsure as to why our population did not proceed
64
into the next developmental stage. We hypothesize that a possible chemical cue caused this
phenomenon; however, more testing is required.
3.3.4 Statistical Analysis
For each of the four plant traits, I ran an ANOVA to determine if there were any overall
differences between the treatment groups. If there was a significant difference I then ran a
Tukey’s HSD (honest significant difference) test to determine if there were differences between
the 12 different treatment types. All statistical analyses were conducted within R statistical
programming (Core Team 2014).
3.4 Results
To determine if there were any significant differences among the treatment types for each
of the plant traits, which include specific leaf area (SLA), leaf dry matter content (LDMC), stem
height, and above ground biomass, an ANOVA was performed (Fig. A1). Referring to Table 1,
it was found that there were differences among the treatments for SLA, LDMC, and stem height,
but not for aboveground biomass. There was substantial variability between treatment types, and
after performing a Tukey’s HSD test I was able to determine the specific differences (Fig. A2).
Treatments were most distinct from one another based on light treatment, closed vs open;
therefore, I examined each of the treatment levels individually to determine if a particular pattern
in the trait response was visible.
65
Starting with the light treatments, it was found that plants that were grown under the
shade enclosures had greater SLA (F(3,195)=419, p = <2e-16) and stem height (F(3,193)=49.5, p =
1.88e-11) than plants grown outside of the enclosures (Fig. 1). Corresponding with the high SLA
in the closed condition, LDMC was lower in response to decreased light availability in
comparison to plants in the open condition (Fig. 1e: F(3,195)=83.2, p = <2e-16). However, there
was no significant difference for LDMC at the end of the experiment (Fig. 1iv). Examining the
combined effect of root origin and light treatment (Fig. 2), I found that prior to the defoliation
treatment, the plant traits appeared to be more diverged in their trait values based on the light
conditions. From the time that the roots were planted (Day 0) to the time of the first sampling
(Day 60), the trait values for SLA (F(3,193)=149, p = <2e-16), LDMC (F(3,193)=27.9, p = 4.93e-15)
and, stem height (F(3,252)=19.3, p = 2.66e-11), had all segregated based on the light treatment
(Fig. 2i, iii, and iv). Additionally, at Day 60 SLA, it was also found that the Shade-Closed and
the Sun-Closed treatment were significantly different from one another (Fig. 2i) with a percent
difference of 7.29 (p=0.00107), which may indicate a maternal effect of root origin.
Interestingly, the plant traits appear to converge on similar values 40 days after the application of
the defoliation treatments (Figs. 1 and 2). With the light treatment alone, the percent difference
between the closed and open treatments for SLA changes from 40.9 to 32.7 (Fig. 1ii: F(3,287)=108,
p = <2e-16). Similarly, for stem height, the percent difference between the treatments also
decreases, from 31.6 to 27.1 (Fig. 1vi: F(3,251)=10.9, p = 9.64e-07). The convergence of trait
values by Day 100 is most apparent for LDMC as none of the treatments are significantly
different from one another at the end of the experiment (Fig. 2iv). For SLA, the difference
between the Shade-Closed and Sun-Closed treatment is no longer present (Fig. 2ii) while, for
66
stem height, there is a weaker relationship with the light treatment since the Shade-Open and
Sun-Closed are no longer significantly different (Fig. 2vi).
Aboveground biomass did not show any significant difference between any of the
treatments for light availability, however, there a negative response to defoliation (Fig.3i:
F(2,57)=3.66, p =0.0319). A percent difference of 39.2 was found between the control and the 75%
removal treatments, however, no significant difference was found for either of those treatments
and the 25% removal. SLA was significantly lower for the 75% removal pots (Fig. 3ii:
F(2,288)=6.73, p =0.014), both in comparison to the 25% removal, with a percent difference of
8.05 (p= 0.04), and the control with a difference of 11.6 (p= 0.00106). Similar to biomass,
LDMC was only significantly different between the 75% removal and control treatments (Fig.
3iii: F(2,288)=63.16, p =0.044, percent difference = 10.7). Examining the interaction between light
availability and the amount of defoliation, it seems that defoliation does not have as strong of an
impact as light since it was found that, for SLA (F(5,285)=78.5, p =<2e-16) and stem height
(F(5,249)=6.2, p =1.96e-05), the treatments diverged primarily due to the light treatment (Fig. 4).
Similar to earlier results, SLA and stem height were greater in the lower light conditions.
Since aboveground biomass did not respond to light availability, I attempted to determine
where the plant resources were potentially being allocated by examining leaf dry weight and leaf
area and seeing how they related to SLA and stem height. The area of the leaves was not
significantly different for any of the four start conditions; however, leaf dry weight did change in
response to light (F(3,287)=11.4, p = 4.13e-07). Leaf dry weight is greater in the treatments with
more light and, since SLA decreases with greater light availability (Fig. 2ii), this could
potentially mean that the plants are allocating more resources to the leaves. In contrast, in the
67
shaded conditions, leaf dry weight and SLA decrease; therefore, resources are being sent
elsewhere, likely the stems as they are generally taller with decreasing light availability (Fig.
2vi).
Another potential location where resources could be sent to is the roots, which were not
assessed in this study. However, a significant difference was found after examining stem height
in relation to root origin, where stem height was greater in plants whose roots were originally
from shade conditions than those from sun conditions (Day 60: F(1,254)=5.13, p = 0.0243; and
Day 100: F(1,253)=3.86, p = 0.0506). Since the roots were collected from three specific areas in
the field I checked to see if there were any site related effects on the plant traits (Fig. 5). Prior to
the defoliation treatment there were several site-level differences for SLA (F(2,194)=3.08, p =
0.0481), LDMC (F(2,194)=17, p = 1.59e-07), and stem height (F(2,253)=3.79, p = 0.024). The
differences between aboveground biomass were even more compelling since all three sites are
significantly different from one another (F(2,57)=14.5, p = 8.24e-06), where Site 2 had the greatest
amount of growth, Site 1 was intermediate, and Site 3 had the least amount of aboveground
growth (Fig. 6). Looking at the interaction between site and root origin prior to the defoliation
treatment (Fig. 7), it was found that for LDMC differed the most between Site 3 and Site 1
(F(5,191)=7.05, p = 4.55e-06). This pattern was also seen for stem height (Fig. 7ii: F(2,250)=6.77, p
= 6.12e-06). After the defoliation treatment, it is clear that plants from Site 3 generally produce
less above ground biomass compared to plants from Sites 1 and 2 (Fig. 8i: F(5,54)=6.55, p = 7.89e-
05). Although, this discrepancy is not consistent, as LDMC shows only minor differences
between Sites 1 and 2 (Fig. 8ii: F(5,285)=3.69, p = 0.00296), and stem height shows only
differences between Site 1 and 3 (Fig. 8c: F(5,249)=6.1, p = 2.37e-05).
68
Overall, the site-level effects are quite minimal, as there are no large deviations from
what was expected from previous results. For instance, similar to what was seen in Fig. 1, SLA
(F(5,191)=91.7, p = <2e-16), stem height (F(5,250)=12.6, p = 6.87e-11), and LDMC (F(5,191)=28.2, p
= <2e-16) show relatively strong differences between the two different light conditions before
the defoliation treatment was applied (Fig. 9). On the other hand, some these differences get
weaker after the defoliation treatment, like those seen for LDMC and stem height (Fig. 10iii and
iv), or stay the same like SLA (Fig. 10b). Additionally, there was a strong difference between
Site 3-Open and Site 2-Closed for both biomass production (Fig. 10i) and stem height (Fig.
10iv). Finally, looking at the interaction between site location and defoliation, for biomass the
more apparent differences were between Site 1 and 2 for both the 25% removal and control, but
not for the 75% removal (Fig. 11i). While significant, SLA and LDMC showed minimal
differences between sites or defoliation treatments (Fig. 11ii and iii).
3.5 Discussion
Overall, the results of this study provide some support for the plastic potential of this
invasive species. I have shown support for the first hypothesis, as this invasive vine can respond
relatively quickly to changes in light availability optimizing for light capture. Additionally, the
results indicate that there is some support for the second hypothesis, which states that DSV is
responding to defoliation.
69
3.5.1 Plasticity in DSV morphology
Light availability appears to play a strong role in the distribution of the trait values for
specific leaf area (SLA), leaf dry matter content (LDMC), and stem height. Prior to the
defoliation treatment, there was a very distinctive partitioning pattern where pots with low light,
i.e. the Shade-Closed and Sun-Closed treatments had higher SLA and stem height in comparison
to the treatments with more light. These higher SLA and stem height values give support that the
DSV was responding in such a way that it was optimizing light capture (Valladares and
Niinemets 2008; and Xu et al. 2009). This pattern is supported by the negative trend seen with
LDMC, which is generally negatively correlated to SLA (Poorter and De Jong 1999). After the
application of the defoliation treatments, the trait values appear to converge as these distinctive
patterns seem to weaken, most significantly with LDMC.
The defoliation results (Fig. 3) for SLA, LDMC, and aboveground biomass the control
pots were significantly different from the 75% removal treatment but were indistinguishable
from the 25% removal pots. Similar to the light and defoliation experiment conducted by
Milbrath (2008), I found that a greater degree of defoliation resulted in lower biomass, lower
SLA, and higher LDMC. Milbrath also found that higher frequencies of defoliation resulted in a
decrease in seed output from the plants; however, I did not observe any of these trends as only 3
of my 60 pots were able to produce seed pods. The interaction between light and defoliation was
only significant for two of the plant traits (Fig. 4) and, based on this result, light played a
stronger role in partitioning the trait values for SLA and stem height.
Interestingly, for aboveground biomass, there were no statistical differences between
either of the light treatments. I had predicted that biomass would increase in shaded conditions
70
since a strategy used by shade-tolerant species includes allocating more resources to
aboveground structures to maximize light capture (Xu et al. 2009). By reviewing the results of
SLA and stem height for the start conditions (Fig. 2) and additionally looking at the area and dry
weight of the leaves collected from the plants, I found that in addition to forming broader leaves,
DSV was apparently sending more resources to the stems to grow taller in response to the lack of
light. The allocation of plant resources to different organs is variable across species and
environments (Poorter and Nagel 2000; Gommers et al. 2013). However, this strategy has been
documented in a few understory plants (Valladares and Niinemets 2008), including the
herbaceous species Claytonia perfoliata, which responded to lower light conditions by forming
leaves with higher SLA (McIntyre and Strauss 2014). According to the results of this study, in
higher light conditions, DSV appears to be sending more resources to the leaves as they weigh
more than the leaves from the shade conditions. This strategy may be a result of the plants
compensating for the higher temperatures on the roof. In the open treatment, the soil in the pots
dried out faster so the plants may be allocating more resources to make thicker leaves to offset
evapotranspiration (Citation). Additionally, I expect that, in these conditions, some of the plant
resources are also being sent to the roots to optimize moisture and nutrient uptake from the soil
(Lopez-Bucio et al. 2003). While I did not measure DSV root traits in this study, others have
shown that roots do change in response to different environmental conditions (Milbrath 2008).
Additionally, it was apparent at the time that I collected the roots from the field that roots from
open fields are different than roots from the understory in terms of overall density and mass.
Roots found in higher light conditions formed denser mats, where individual root crowns were
more difficult to distinguish in comparison to root crowns from the understory that could be
easily identified.
71
The fact the plants differ so much due to the roots at the beginning of the study gives
some indication that there could potentially have been some maternal effects, which are the
causal influence of the maternal phenotype (or genotype) on the offspring phenotype (Wolf and
Wade 2009). To look for maternal effects, I first determined whether root origin (sun vs shade
conditions) played a significant role in the trait distribution. Overall, the origin of the roots did
not appear to play a strong role except for stem height, which showed a strong difference
between understory and open field roots. Interested in whether the location of where the roots
were collected, i.e. what field site they were from, affected the overall trait response, I examined
the traits to see if there was a site level effect (Fig. 5). In particular, aboveground biomass
showed large differences between Site 3 and the other two sites. By incorporating the interaction
between site and light availability, this result remains consistent as biomass produced from plants
from Site 3 are lower than the other sites (Fig. 6), especially when including the interaction of
root origin (Fig. 7). The interaction between site and the defoliation treatments does not show
very strong differences but there are some interesting trends. For all of the control and 25%
removal treatments, it is very clear that Site 3 is consistently lower than Site 2. This trend is not
apparent for the 75% removal treatments, which may indicate that either the maternal effects are
not as significant with such a high level of defoliation, or that at this level of defoliation the plant
were so damaged that they could not be separated out based on the maternal effects.
3.5.2 Broader Implications
Plasticity in the morphological traits of an invasive species is important to consider
because they may reflect the different strategies that invasive plants may employ to be
72
successful. What is apparent from these results is that light is playing a strong role in
determining the trait distribution for these four plants traits despite there being site level effects,
and that DSV does appear to be responding plastically to both light availability and different
levels of defoliation.
Many invasive species, especially plants, can show a wide array of trait characteristics
across different environments (Valladares and Niinemets 2008), Moreover, many of these
species can take advantage of disturbance events that can alter habitats in such a way that they
become more likely to be invaded (Davis et al. 2000). However, very little is known about
understory invaders and, while assessing the response of DSV to light provides some evidence
for its adaptive strategy, more work looking at a variety of different environmental gradients will
be necessary. Within the Rouge Park, where this plant is extremely pervasive, there are several
different types of forest types, such as mixed deciduous stands and pine stands, which both have
different environmental or microclimate conditions, thus, more intensive studies about how
different factors affect the growth of DSV will be necessary. For example, factors such as soil
nutrient availability have been shown to strongly influence the distribution of invasive species,
but other factors like soil moisture or soil pH will also be important (Ehrenfeld et al. 2001).
A caveat regarding the results of this work is that no direct measurements of fitness were
taken. This includes reproductive success through the production of viable seeds since only 3 of
the 60 pots produced seed pods. The lack of overall growth and seed production may be a result
of the harsher conditions experienced by the plants atop the roof. Green roof studies have shown
that the climatic conditions on top of building roofs can fluctuate quite dramatically, thereby,
limiting the type of plant species that can survive there (Nagase and Dunnett 2010). Therefore,
73
while DSV has been shown to tolerate a wide range of climatic conditions (DiTomasso et al
2005), the high temperature and low precipitation on top of the roofs may have been too extreme.
Thus, it may be beneficial to conduct a similar experiment with more stable growing conditions
such as in a growth chamber or within a greenhouse.
Results from this study indicate that biomass only significantly decreases with a 75%
removal treatment. With DSV being present in such high densities, a lot of money and effort will
be needed to either mechanically or chemically remove this plant (McKague and Cappuccino
2005; and Averill et al. 2008). An alternative route is to use a biological control agent, such as
Hypena opulenta which has been approved for use in Canada (Casagrande et al. 2012).
However, higher densities of this control agent, upwards to 4-8 larvae per plant, will be
necessary in order to reach the 75% defoliation threshold (Weed and Casagrande 2010). Vast
numbers of H. opulenta can be reared in laboratory conditions and have been shown to
effectively feed of DSV; however, the efficacy of this control agent in field conditions has yet to
be explored. Moreover, this control agent has only been found in the understory so it is not clear
whether or not it would be effective in open fields (Weed and Casagrande 2010).
Overall, the next big step for understanding the invasion success of this invasive vine will
be assessing the degree of genetic variability its various populations express. This study indicates
that there are some potential maternal effects at work and, thus, disentangling the differences
between genetic, epigenetic, and plastic responses should shed some light on exactly how this
species is responding to its environment in term of resource allocation. This information could
help inform management processes as it could aid in the development of more targeted
programs. For instance, if more resources are being sent to the aboveground structures in lower
74
light environments, then a leaf defoliator like H. opulenta may best be suited for the understory.
However, if resources are being sent to belowground structures, a root herbivore such as root
feeding beetle Eumolpus asclepiadeus may be more suitable (Weed et al. 2011). In either case,
more work must be done to understand how plasticity in the traits of this invasive vine is aiding
or providing a fitness advantage in different environments in comparison to other species.
75
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78
Tables
Table 3.1: Results from the ANOVA Tests for each of the morphological traits for each of the treatments for Day 60 of the experiment
Response
Variable
Full Start Condition (4 types)
Light treatment
(Closed/Open) Root Origin (Shade/Sun)
df Residuals F-stat
p-
value df Residuals
F-
stat
p-
value df Residuals F-stat
p-
value
Specific
leaf area 3 193 148.8
<2e-
16 1 195 419
<2e-
16
Leaf dry
matter
content 3 193 27.9
4.93E-
15 1 195 83.2
<2e-
16
Stem
height 3 252 19.31
2.66E-
11 1 254 49.5
1.88E-
11 1 254 5.132 0.0243
Table 3.1: cont.
Response
Variable
Site Site:Origin Site:Light Site:Origin:Light
df Residuals
F-
stat
p-
value df Residuals
F-
stat
p-
value df Residuals
F-
stat
p-
value df Residuals
F-
stat
p-
value
Specific
leaf area 2 194 3.08
4.81E-
02 5 191 91.7
<2e-
16 11 185 48.8
<2e-
16
Leaf dry
matter
content 2 194 17
1.59E-
07 5 191 7.05
4.55E-
06 5 191 28.2
<2e-
16 11 185 13.2
<2e-
16
Stem
height 2 253 3.79 0.024 5 250 6.77
6.12E-
06 5 250 12.6
6.87E-
11 11 244 10.6
7.26E-
16
79
Table 3.2: Results from the ANOVA Tests for each of the morphological traits for each of the treatments for Day 100 of the experiment
Response
Variable
Full treatment (12 types) Full Start Condition (4 types)
Light treatment
(Closed/Open)
df Residuals
F-
stat
p-
value df Residuals F-stat
p-
value df Residuals
F-
stat
p-
value
Specific
leaf area 11 279 37.2
<2e-
16 3 287 108.2
<2e-
16 1 289 316.1
<2e-
16
Leaf dry
matter
content 11 279 3.43
1.71E-
03
Stem
height 11 243 4.324
6.62E-
06 3 251 10.89
9.64E-
07 1 253 27.06
4.04E-
07
Above
ground
biomass
Table 3.2: cont.
Response
Variable
Defoliation Light:Defoliation Root Origin (Shade/Sun)
df Residuals F-stat
p-
value df Residuals
F-
stat
p-
value df Residuals F-stat
p-
value
Specific
leaf area 2 288 6.73
1.40E-
02 5 285 78.46
<2e-
16
Leaf dry
matter
content 2 288 3.16
4.40E-
02
Stem
height 5 249 6.196
1.96E-
05 1 253 3.859 0.0506
Above
ground
biomass 2 57 3.66
3.19E-
02
80
Table 3.2:
Response
Variable
Site Site:Origin Site:Light Site:Defoliation
df Residuals
F-
stat
p-
value df Residuals
F-
stat p-value df Residuals
F-
stat
p-
value df Residuals
F-
stat
p-
value
Specific leaf
area 5 285 65.2
<2e-
16 8 282 7.64
2.93E-
09
Leaf dry
matter
content 5 285 3.69 0.00296 5 285 2.78
1.82E-
02 8 282 2.51 0.0121
Stem height 5 249 6.1
2.37E-
05 5 249 7.09
3.26E-
06
Aboveground
Biomass 2 57 14.5
8.24E-
06 5 54 6.55
7.89E-
05 5 54 6.65
6.84E-
05 8 51 5.84
2.69E-
05
Table 3.2: cont.
Response
Variable
Site:Origin:Light Site:Origin:Defoliation
df Residuals
F-
stat p-value df Residuals
F-
stat p-value
Specific leaf
area 11 279 33.6 <2e-16 17 273 5.77 3.23E-11
Leaf dry
matter
content 11 279 3.64
7.83E-
05 17 273 5.63 6.62E-11
Stem height 11 243 6.93
3.63E-
10 17 237 3.13 5.15E-05
Aboveground
Biomass 11 48 3.5 0.00121 17 42 3.47 0.000526
81
Figures
Fig. 3.1: The distribution of trait values across the two light conditions, both at the start of the
experiment and at the end of the experiment. i) SLA, removal day: F(1,196)=424, p = <2e-16; ii)
SLA, collection day: F(1,290)=284, p = <2e-16; iii) LDMC, removal day: F(1,196)=75.1, p = 1.7e-
15; iv) LDMC, collectionl day: no significant difference; v) Stem height, removal day: F-
(1,254)=49.5, p = 1.88e-11; and, vi) stem height, collection day: F(1,253)=27.1, p = 4.07e-07
i
iii
ii
iv
vi v
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Fig. 3.2: The distribution of trait values across the four different start conditions, both at the start
of the experiment and at the end of the experiment. Letters indicate no significant difference
between treatments. i) SLA, removal day: F(3,193)=149, p = <2e-16; ii) SLA, collection day: F-
(3,287)=108, p = <2e-16; iii) LDMC, removal day: F(3,193)=27.9, p = 4.93e-15; iv) LDMC,
collection day: no significant differences; v) Stem height, removal day: F(3,252)=19.3, p = 2.66e-
11; and vi) stem height, collection day: F(3,251)=10.9, p = 9.64e-07
i
iii
ii
iv
vi v
83
Fig. 3.3: The distribution of trait values across the three different defoliation treatments. Letters
indicate no significant difference between treatments. i) Aboveground biomass: F(2,57)=3.66, p
=0.0319; ii) SLA: F(2,288)=6.73, p =0.014; and iii) LDMC: F(2,288)=63.16, p =0.044
i
iii
ii
84
Fig. 3.4: The distribution of trait values in response to the interaction between light availability
and defoliation. Letters indicate no significant difference between treatments. i) SLA:
F(5,285)=78.5, p =<2e-16; and ii) Stem height: F(5,249)=6.2, p =1.96e-05
i
ii
85
Fig. 3.5: The distribution of trait values in across the three sites where the roots were collected.
Letters indicate no significant difference between treatments. i) SLA: F(2,194)=3.08, p = 0.0481;
ii) LDMC: F(2,194)=17, p = 1.59e-07; and iii) Stem height: F(2,253)=3.79, p = 0.024
i
iii
ii
86
Fig. 3.6: Aboveground biomass across the three sites where the roots were collected. F(2,57)=14.5,
p = 8.24e-06
87
Fig. 3.7: The distribution of trait values in response to the interaction between which site the
roots were collected from and which light condition the roots were originally found in. Letters
indicate no significant difference between treatments. i) LDMC: F(5,191)=7.05, p = 4.55e-06; and
ii) stem height: F(2,250)=6.77, p = 6.12e-06
i
ii
88
Fig. 3.8: The distribution of trait values in response to the interaction between which site the
roots were collected from and which light condition the roots were originally found in. Letters
indicate no significant difference between treatments. i) Biomass: F(5,54)=6.55, p = 7.89e-05; ii)
F(5,285)=3.69, p = 0.00296; and iii) Stem height: F(5,249)=6.1, p = 2.37e-05
i
iii
ii
89
Fig. 3.9: The distribution of trait values in response to the interaction between which site the
roots were collected from and light availability. i) SLA: F(5,191)=91.7, p = <2e-16; ii) LDMC:
F(5,191)=28.2, p = <2e-16; and iii) Stem height: F(5,250)=12.6, p = 6.87e-11
i
iii
ii
90
Fig. 3.10: The distribution of trait values in response to the interaction between which site the
roots were collected from and light availability. i) Biomass: F(5,54)=6.65, p = 6.84e-05; ii) SLA:
F(5,285)=65.2, p = <2e-16; iii) LDMC: F(5,285)=2.78, p = 0.0182; and iv) Stem height: F(5,249)=7.09,
p = 3.26e-06
i
iii
ii
iv
91
Fig. 3.11: The distribution of trait values in response to the interaction between which site the
roots were collected from and defoliation. i) Biomass: F(8, 51)=5.84, p = 2.69e-05; ii) SLA: F(8,
282)=7.64, p = 2.93e-09; and iii) LDMC: F(8, 282)=2.51, p = 0.0121
i
iii
ii
92
Appendix
Fig. 3.A1: The distribution of trait values across the twelve different treatment types. i) Specific
leaf area (SLA): F(11,279)=37.2, p = <2e-16; ii) Leaf dry matter content (LDMC): F(11,279)=3.43, p
= 1.71e-03; iii) stem height: F(11,243)=4.32, p = 6.62e-06; and iv) above ground biomass, which
was not significant
i
iii
ii
iv
93
Fig. 3.A2: Results of the Tukey’s HSD test for the three plant traits that were significant. Grey
squares in indicate a significant difference (p <0.05) between treatments, and white squares
indicate no differences. Treatments, indicated by letters a to l, are ordered by increasing mean
values
94
Fig. 3.A3: Map of the University of Toronto Scarborough Campus. Yellow pin indicates the
Science Building roof where the greenhouse experiment took place.
95
Fig. 3.A4: Picture of the experimental set-up for the greenhouse experiment
96
Chapter 4 Thesis Summary
4.1 Summary of thesis chapters
In the introduction of this thesis I briefly discussed the current state of the field of
invasion biology. Since the publication of Charles Elton’s seminal work (Elton 1958), the field
of invasion biology has grown considerably. As a result of that growth, a great abundance of
potential mechanisms contributing to invasion success have been proposed. Many of these
mechanisms primarily focus on either the invasiveness of a species (Richardson and van Kleunen
2007), or on the invasibility of a particular habitat (Davis et al. 2005). In line with this body of
work, this thesis primarily focused on understanding more about the invasiveness of the invasive
vine Vincetoxicum rossicum or Dog-Strangling Vine.
In Chapter 2, I determined how much this invader varies in its trait values across two
environmental gradients. By assessing a variety of morphological traits it was that that DSV
exhibits a high degree of intraspecific variability in response to different environmental
conditions. The results indicate that in response to light availability DSV can maintain positive
growth by increasing its biomass production to optimize light capture (Valladares and
Niinemetes 2008). Additionally, I found that the morphological traits of DSV vary in response to
differences in soil nutrient availability. Though not consistent across all of the traits, it was
generally found that DSV responded favorably, i.e. showing positive growth, in response to
greater levels of soil nutrients
In Chapter 3, I examined two niche-related mechanisms believed to contribute to
invasion success. The first hypothesis, niche breadth-invasion success, is related to the plasticity
97
of an invader’s functional traits (Sultan 2000). Phenotypic plasticity is thought to enhance a
species ecological niche breadth (Richards et al. 2006) and, thus, contribute to the four
invasiveness factors: population persistence over time; high local abundance; successful
colonization of new areas; and a wide geographic range (Sakai et al. 2001). To assess the degree
of plasticity DSV exhibits, I conducted a reciprocal transplant experiment and subjected the
plants to two different light environments. Overall, it was found that DSV can respond relatively
quickly, within one growing season, to changes in light availability. Plasticity in certain
morphological traits, particularly the leaf traits and stem height, allows DSV to optimize light
capture in low light environments, therefore, facilitating positive growth in that stressful
environment.
The second hypothesis that was examined in this chapter was the enemy release
hypothesis, which is believed to contribute a great deal to invasion success (Colautti et al. 2004,
Richardson and Pysek 2008). Using artificial defoliation, I found that all of the morphological
traits respond negatively to high levels of defoliation. This negative response was expected as it
was demonstrated in previous studies (Milbrath 2008), and therefore provides further evidence
that an effect way to manage this invasive species may be possible.
4.2 Implications and future directions
This thesis provides valuable information regarding the intraspecific variation of DSV.
Intraspecific trait variation is an important aspect to consider in community ecology because it
provides a more complete estimation of within-species trait distributions (Violle et al. 2010).
Understanding more about the trait distribution of a single species can then allow ecologists to
scale up and determine how a particular community will assembly based off of resource
98
partitioning (Laughlin et al. 2012). Knowing which species are present within a community and
where they fall along a resource gradient should provide enough information to estimate the
niche space of a habitat. Understanding more about the niche space, specifically if there are open
areas for a potential invader to take advantage of should allow us to accurately predict the
vulnerability of that particular habitat to invasions.
Additionally, the plasticity assessment of DSV offers us a view on how this invader
became so successful. DSV can rapidly respond to environmental changes which can be a huge
advantage in a heterogeneous landscape. An important next step will be determining if this
plasticity results in a fitness advantage. Previous studies have found that invasive species are
usually more plastic that either native species or non-invasive species (Davidson et al. 2011),
however, being plastic in certain traits does not always confer a fitness advantage. DSV has not
been well-studied in its native range (DiTommaso et al. 2005), and so we have little information
on how much this species has evolve in the 100 years that it’s been present in North America.
Understanding more about the evolutionary history of this plant could potentially help us manage
this species more effectively. In particular, understanding more about the co-evolution of this
species with its native enemies should provide us with an accurate estimation of the efficacy of
certain control methods such as chemical or biological controls.
99
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