Harmon arbor v2
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Transcript of Harmon arbor v2
“Tell us a story from before we can remember”--- from The Tree of Life (2011)
Arbor
• Arbor: big picture
• Main features
• Next-generation comparative biology
https://github.com/arborworkflows
Arbor: big picture
Comparative methods through visual workflows
Girder user management
Romanesco workflow engine
Comparative methods through visual workflows
Data exchange via
web services
Open Tree of Life
GBIF / BISONDryad
Phenomics
MongoDB database
Comparative methods through visual workflows
Data exchange via
web services
Implement novel analysis workflows
Comparative methods through visual workflows
Data exchange via
web services
Implement novel analysis workflows
Scale to very large trees
www.onezoom.org
future vision
easy mode and arbor
arbor pro
List of cool
species
open tree
morpho-bank
GBIF
Phylo-geo-trait
analysis
Plot results
Results to
datbase
https://arbor.kitware.com
https://github.com/arborworkflows/arborworkflows.github.com/wiki/Arbor-Demonstration-Videos
Arbor links to OpenTree
Luke HARMON Curtis LISLE
Chelsea SPECHT Jorge SOBERON Bob THACKER
Charlie HUGHESWes TURNER Jeff BAUMES