GP In Hours Conjunctivitis no trend below baseline levels Mumps … · 2020-07-30 · weekend bank...

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GP In Hours Syndromic Surveillance System: England 28 July 2020 Data to: 26 July 2020 Key messages During week 30, COVID-19-like GP consultations decreased slightly (figure 1). All other respiratory indicators remained stable and at or below seasonally expected levels. Please note that currently the COVID-19-like GP consultation indicator is based on a reduced denominator population (no other indicators are affected). Please see notes and caveatsfor information about the COVID-19-like GPIH syndromic indicator including important caveats around the interpretation of this indicator. In This Issue: Key messages. Diagnostic indicators at a glance. GP practices and denominator population. National syndromic indicators. Notes and further information. Diagnostic indicators at a glance: GP practices and denominator population: **based on the average number of practices and denominator population in the reporting working week. A Heat-Health Watch system operates in England from 1 June to 15 September each year. As part of the Heatwave Plan for England, the PHE Real-time Syndromic Surveillance team will be routinely monitoring the public health impact of hot weather using syndromic surveillance data during this period. Heat-health watch level (current reporting week): Level 1 Summer preparedness http://www.metoffice.gov.uk/weather/uk/heathealth/ Year Week GP Practices Reporting** Population size** 2020 30 3,973 35.9 million Year: 2020 Week: 30 Indicator Trend Level COVID-19-like decreasing - Upper respiratory tract infection no trend below baseline levels Influenza-like illness no trend similar to baseline levels Pharyngitis no trend below baseline levels Scarlet fever no trend below baseline levels Lower respiratory tract infection no trend below baseline levels Pneumonia no trend below baseline levels Gastroenteritis no trend below baseline levels Vomiting no trend below baseline levels Diarrhoea increasing below baseline levels Asthma no trend below baseline levels Conjunctivitis no trend below baseline levels Mumps no trend below baseline levels Measles no trend below baseline levels Rubella no trend below baseline levels Pertussis no trend below baseline levels Chickenpox no trend below baseline levels Herpes zoster no trend below baseline levels Cellulitis no trend below baseline levels Impetigo no trend below baseline levels Allergic rhinitis no trend below baseline levels Heat/sunstroke no trend below baseline levels

Transcript of GP In Hours Conjunctivitis no trend below baseline levels Mumps … · 2020-07-30 · weekend bank...

Page 1: GP In Hours Conjunctivitis no trend below baseline levels Mumps … · 2020-07-30 · weekend bank holiday Mumps 7 day mov avg baseline 13: Mumps Daily incidence rate (and 7-day moving

GP In Hours Syndromic Surveillance System:

England

28 July 2020

Data to: 26 July 2020Key messages

During week 30, COVID-19-like GP consultations decreased slightly (figure 1). All other respiratory indicators remained stable and at or below seasonally expected levels. Please note that currently the COVID-19-like GP consultation indicator is based on a reduced denominator population (no other indicators are affected). Please see ‘notes and caveats’ for information about the COVID-19-like GPIH syndromic indicator including important caveats around the interpretation of this indicator.

In This Issue:

Key messages.

Diagnostic indicators at a glance.

GP practices and denominator population.

National syndromic indicators.

Notes and further information.

Diagnostic indicators at a glance:

GP practices and denominator population:

**based on the average number of practices and denominator population in the reporting working week.

A Heat-Health Watch system operates in England from 1 June to 15 September each year. As part of the Heatwave Plan for England, the PHE Real-time Syndromic Surveillance team will be routinely monitoring the public health impact of hot weather using syndromic surveillance data during this period. Heat-health watch level (current reporting week): Level 1 Summer preparedness

http://www.metoffice.gov.uk/weather/uk/heathealth/

Year Week GP Practices Reporting** Population size**

2020 30 3,973 35.9 million

Year: 2020 Week: 30

Indicator Trend Level

COVID-19-like decreasing -

Upper respiratory tract infection no trend below baseline levels

Influenza-like illness no trend similar to baseline levels

Pharyngitis no trend below baseline levels

Scarlet fever no trend below baseline levels

Lower respiratory tract infection no trend below baseline levels

Pneumonia no trend below baseline levels

Gastroenteritis no trend below baseline levels

Vomiting no trend below baseline levels

Diarrhoea increasing below baseline levels

Asthma no trend below baseline levels

Conjunctivitis no trend below baseline levels

Mumps no trend below baseline levels

Measles no trend below baseline levels

Rubella no trend below baseline levels

Pertussis no trend below baseline levels

Chickenpox no trend below baseline levels

Herpes zoster no trend below baseline levels

Cellulitis no trend below baseline levels

Impetigo no trend below baseline levels

Allergic rhinitis no trend below baseline levels

Heat/sunstroke no trend below baseline levels

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GP In Hours

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* 7-day moving average adjusted for bank holidays.

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1. COVID-19-like

consultations

Daily incidence rate (and 7-day moving average*) per 100,000 population (all England, based on a denominator population of approximately 5.5 million patients). Indicator includes consultations using new codes for suspected, tested, exposed and confirmed COVID-19.

Year: 2020 Week: 30

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23/02/20 08/03/20 22/03/20 05/04/20 19/04/20 03/05/20 17/05/20 31/05/20 14/06/20 28/06/20 12/07/20 26/07/20

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Weekend Bank holiday covid-19 7 day moving average

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GP In Hours

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* 7-day moving average adjusted for bank holidays.

2: Upper respiratory

tract infection (URTI)

Daily incidence rate (and 7-day moving average*) per 100,000 population (all England, all ages).

0

100

200

300

400

500

600

700

800

900

1000

31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 01 02 03 04 05 06 07 08 09 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30

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Under 1 Year 1 to 4 5 to 14 15 to 44 45 to 64 65 to 74 75 plus All ages

2a: Upper respiratory tract infection (URTI) by age

Average daily incidence rate by week per 100,000 population (all England).

0

20

40

60

80

100

120

140

160

28/07/19 25/08/19 22/09/19 20/10/19 17/11/19 15/12/19 12/01/20 09/02/20 08/03/20 05/04/20 03/05/20 31/05/20 28/06/20 26/07/20

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weekend bank holiday URTI 7 day mov avg baseline

Year: 2020 Week: 30

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2

3

4

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6

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28/07/19 25/08/19 22/09/19 20/10/19 17/11/19 15/12/19 12/01/20 09/02/20 08/03/20 05/04/20 03/05/20 31/05/20 28/06/20 26/07/20

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weekend bank holiday Influenza-like illness 7 day mov avg baseline

28 July 2020.

3: Influenza-like illness

(ILI)

Daily incidence rates (and 7-day moving average*) per 100,000 population (all England, all ages).

* 7-day moving average adjusted for bank holidays.

3a: Influenza-like illness by age

Average daily incidence rate by week per 100,000 population (all England).

0

2

4

6

8

10

12

14

16

18

31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 01 02 03 04 05 06 07 08 09 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30

2019 2020

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Year - Week

Under 1 Year 1 to 4 5 to 14 15 to 44 45 to 64 65 to 74 75 plus All ages

3b: Influenza-like

illness by PHE

Centre

Average daily incidence rate by week per 100,000 population (all ages).

0

1

2

3

4

5

6

7

8

9

31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 01 02 03 04 05 06 07 08 09 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30

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Week

East Midlands East of England London North East North West South East South West West Midlands Yorkshire and Humber England

Year: 2020 Week: 30

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GP In Hours

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4: Pharyngitis or scarlet fever

* 7-day moving average adjusted for bank holidays.

Daily incidence rate (and 7-day moving average*) per 100,000 population (all England, all ages).

5: Scarlet fever

Daily incidence rate (and 7-day moving average*) per 100,000 population (all England, based on a denominator population of approximately 5.5 million patients)

5a: Scarlet fever by age

Average daily incidence rate by week per 100,000 population (all England, based on a denominator population of approximately 5.5 million patients).

0

1

2

3

4

5

31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 01 02 03 04 05 06 07 08 09 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30

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Under 1 Year 1 to 4 5 to 14 15 to 44 45 to 64 65 to 74 75 plus All ages

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15

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25

30

35

28/07/19 25/08/19 22/09/19 20/10/19 17/11/19 15/12/19 12/01/20 09/02/20 08/03/20 05/04/20 03/05/20 31/05/20 28/06/20 26/07/20

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weekend bank holiday Pharyngitis or scarlet fever 7 day mov avg baseline

0.0

0.2

0.4

0.6

0.8

1.0

1.2

1.4

1.6

28/07/19 25/08/19 22/09/19 20/10/19 17/11/19 15/12/19 12/01/20 09/02/20 08/03/20 05/04/20 03/05/20 31/05/20 28/06/20 26/07/20

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weekend bank holiday Scarlet Fever 7 day mov avg baseline

Year: 2020 Week: 30

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GP In Hours

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weekend bank holiday LRTI 7 day mov avg baseline

28 July 2020.

6: Lower respiratory tract infection (LRTI)

Daily incidence rate (and 7-day moving average*) per 100,000 population (all England, all ages).

* 7-day moving average adjusted for bank holidays.

6a: Lower respiratory

tract infection (LRTI)

by age

Average daily incidence rate by week per 100,000 population (all England).

0

50

100

150

200

250

300

350

400

450

500

31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 01 02 03 04 05 06 07 08 09 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30

2019 2020

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Under 1 Year 1 to 4 5 to 14 15 to 44 45 to 64 65 to 74 75 plus All ages

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Year: 2020 Week: 30

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0.0

0.2

0.4

0.6

0.8

1.0

1.2

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weekend bank holiday Pneumonia 7 day mov avg baseline

28 July 2020.

7: Pneumonia

Daily incidence rate (and 7-day moving average*) per 100,000 population (all England, all ages).

* 7-day moving average adjusted for bank holidays.

7a: Pneumonia by age

0

1

2

3

4

5

6

7

8

31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 01 02 03 04 05 06 07 08 09 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30

2019 2020

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Average daily incidence rate by week per 100,000 population (all England).

Intentionally left blank

Year: 2020 Week: 30

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GP In Hours

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8: Gastroenteritis

Daily incidence rate (and 7-day moving average*) per 100,000 population (all England, all ages).

* 7-day moving average adjusted for bank holidays.

8a: Gastroenteritis by age

Average daily incidence rate by week per 100,000 population (all England).

0

20

40

60

80

100

120

140

160

180

200

31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 01 02 03 04 05 06 07 08 09 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30

2019 2020

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Under 1 Year 1 to 4 5 to 14 15 to 44 45 to 64 65 to 74 75 plus All ages

9: Vomiting

Daily incidence rate (and 7-day moving average*) per 100,000 population (all England, all ages).

0

1

2

3

4

5

6

7

8

9

10

11

12

28/07/19 25/08/19 22/09/19 20/10/19 17/11/19 15/12/19 12/01/20 09/02/20 08/03/20 05/04/20 03/05/20 31/05/20 28/06/20 26/07/20

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weekend bank holiday Vomiting 7 day mov avg baseline

0

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15

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weekend bank holiday Gastroenteritis 7 day mov avg baseline

Year: 2020 Week: 30

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GP In Hours

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9a: Vomiting by age

Average daily incidence rate by week per 100,000 population (all England).

* 7-day moving average adjusted for bank holidays.

0

10

20

30

40

50

60

70

80

90

100

31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 01 02 03 04 05 06 07 08 09 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30

2019 2020

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Year - Week

Under 1 Year 1 to 4 5 to 14 15 to 44 45 to 64 65 to 74 75 plus All ages

10: Diarrhoea

Daily incidence rate (and 7-day moving average*) per 100,000 population (all England, all ages).

10a. Diarrhoea by age

Average daily incidence rate by week per 100,000 population (all England).

0

10

20

30

40

50

60

70

80

90

100

31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 01 02 03 04 05 06 07 08 09 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30

2019 2020

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Under 1 Year 1 to 4 5 to 14 15 to 44 45 to 64 65 to 74 75 plus All ages

0

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4

6

8

10

12

14

16

18

20

28/07/19 25/08/19 22/09/19 20/10/19 17/11/19 15/12/19 12/01/20 09/02/20 08/03/20 05/04/20 03/05/20 31/05/20 28/06/20 26/07/20

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weekend bank holiday Diarrhoea 7 day mov avg baseline

Year: 2020 Week: 30

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1

2

3

4

5

6

28/07/19 25/08/19 22/09/19 20/10/19 17/11/19 15/12/19 12/01/20 09/02/20 08/03/20 05/04/20 03/05/20 31/05/20 28/06/20 26/07/20

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weekend bank holiday Asthma 7 day mov avg baseline

28 July 2020.

11: Asthma

Daily incidence rate (and 7-day moving average*) per 100,000 population (all England, all ages).

* 7-day moving average adjusted for bank holidays.

11a: Asthma by age

Average daily incidence rate by week per 100,000 population (all England).

0

1

2

3

4

5

6

7

8

31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 01 02 03 04 05 06 07 08 09 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30

2019 2020

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Under 1 Year 1 to 4 5 to 14 15 to 44 45 to 64 65 to 74 75 plus All ages

12: Conjunctivitis

Daily incidence rate (and 7-day moving average*) per 100,000 population (all England, all ages).

0

2

4

6

8

10

12

14

16

18

20

28/07/19 25/08/19 22/09/19 20/10/19 17/11/19 15/12/19 12/01/20 09/02/20 08/03/20 05/04/20 03/05/20 31/05/20 28/06/20 26/07/20

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weekend bank holiday Conjunctivitis 7 day mov avg baseline

Year: 2020 Week: 30

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0.00

0.05

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0.15

0.20

0.25

0.30

0.35

28/07/19 25/08/19 22/09/19 20/10/19 17/11/19 15/12/19 12/01/20 09/02/20 08/03/20 05/04/20 03/05/20 31/05/20 28/06/20 26/07/20

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weekend bank holiday Mumps 7 day mov avg baseline

13: Mumps

Daily incidence rate (and 7-day moving average*) per 100,000 population (all England, all ages).

GP In Hours

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* 7-day moving average adjusted for bank holidays.

14: Measles

Daily incidence rate

(and 7-day moving

average*) per 100,000

population (all England,

all ages).

15: Rubella

Daily incidence rate (and 7-day moving average*) per 100,000 population (all England, all ages).

0.00

0.02

0.04

0.06

0.08

0.10

0.12

0.14

0.16

28/07/19 25/08/19 22/09/19 20/10/19 17/11/19 15/12/19 12/01/20 09/02/20 08/03/20 05/04/20 03/05/20 31/05/20 28/06/20 26/07/20

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weekend bank holiday Measles 7 day mov avg baseline

0.000

0.005

0.010

0.015

0.020

0.025

0.030

0.035

0.040

0.045

28/07/19 25/08/19 22/09/19 20/10/19 17/11/19 15/12/19 12/01/20 09/02/20 08/03/20 05/04/20 03/05/20 31/05/20 28/06/20 26/07/20

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weekend bank holiday Rubella 7 day mov avg baseline

Year: 2020 Week: 30

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* 7-day moving average adjusted for bank holidays.

18: Herpes zoster

Daily incidence rate

(and 7-day moving

average*) per 100,000

population (all England,

all ages).

16: Pertussis

Daily incidence rate (and 7-day moving average*) per 100,000 population (all England, based on a denominator population of approximately 5.5 million patients)

17: Chickenpox

Daily incidence rate (and 7-day moving average*) per 100,000 population (all England, based on a denominator population of approximately 5.5 million patients)

0.0

1.0

2.0

3.0

4.0

5.0

6.0

28/07/19 25/08/19 22/09/19 20/10/19 17/11/19 15/12/19 12/01/20 09/02/20 08/03/20 05/04/20 03/05/20 31/05/20 28/06/20 26/07/20

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weekend bank holiday Herpes Zoster 7 day mov avg baseline

0.0

1.0

2.0

3.0

4.0

5.0

28/07/19 25/08/19 22/09/19 20/10/19 17/11/19 15/12/19 12/01/20 09/02/20 08/03/20 05/04/20 03/05/20 31/05/20 28/06/20 26/07/20

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weekend bank holiday chickenpox 7 day moving average baseline

0.0

0.1

0.2

0.3

0.4

0.5

28/07/19 25/08/19 22/09/19 20/10/19 17/11/19 15/12/19 12/01/20 09/02/20 08/03/20 05/04/20 03/05/20 31/05/20 28/06/20 26/07/20

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weekend bank holiday pertussis 7 day moving average baseline

Year: 2020 Week: 30

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19 Cellulitis

Daily incidence rate (and 7-day moving average*) per 100,000 population (all England, all ages).

* 7-day moving average adjusted for bank holidays.

20: Impetigo

Daily incidence rate (and 7-day moving average*) per 100,000 population (all England, all ages).

0

2

4

6

8

10

12

14

16

18

20

28/07/19 25/08/19 22/09/19 20/10/19 17/11/19 15/12/19 12/01/20 09/02/20 08/03/20 05/04/20 03/05/20 31/05/20 28/06/20 26/07/20

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weekend bank holiday Cellulitis 7 day mov avg baseline

28 July 2020.

21: Allergic rhinitis.

0

5

10

15

20

25

30

35

40

28/07/19 25/08/19 22/09/19 20/10/19 17/11/19 15/12/19 12/01/20 09/02/20 08/03/20 05/04/20 03/05/20 31/05/20 28/06/20 26/07/20

Da

ily r

ate

pe

r 100,0

00 p

op

ula

tio

n

weekend bank holiday Allergic Rhinitis 7 day mov avg baseline

0.0

0.5

1.0

1.5

2.0

2.5

3.0

3.5

4.0

28/07/19 25/08/19 22/09/19 20/10/19 17/11/19 15/12/19 12/01/20 09/02/20 08/03/20 05/04/20 03/05/20 31/05/20 28/06/20 26/07/20

Da

ily r

ate

pe

r 100,0

00 p

op

ula

tio

n

weekend bank holiday Impetigo 7 day mov avg baseline

Daily incidence rate (and 7-day moving average*) per 100,000 population (all England, all ages).

Year: 2020 Week: 30

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0.00

0.02

0.04

0.06

0.08

0.10

0.12

0.14

0.16

0.18

0.20

28/07/19 25/08/19 22/09/19 20/10/19 17/11/19 15/12/19 12/01/20 09/02/20 08/03/20 05/04/20 03/05/20 31/05/20 28/06/20 26/07/20

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pe

r 100,0

00 p

op

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weekend bank holiday Heat stroke 7 day mov avg baseline

GP In Hours

Page 14.

22 Heat/sun stroke

Daily incidence rate (and 7-day moving average*) per 100,000 population (all England, all ages).

* 7-day moving average adjusted for bank holidays.

28 July 2020. Year: 2020 Week: 30

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GP In Hours

Page 15.

28 July 2020. Year: 2020 Week: 30

Notes and further information

• The Public Health England GP in hours surveillance system is a syndromic surveillance system monitoring community-based morbidity recorded by GP practices.

• GP consultation data are analysed on a daily basis to identify national and regional trends. A statistical algorithm underpins each system, routinely identifying activity that has increased significantly or is statistically significantly high for the time of year. Results from these daily analyses are assessed by the ReSST, along with analysis by age group, and anything deemed of public health importance is alerted by the team.

• This system captures anonymised GP morbidity data from two GP clinical software systems, EMIS, from version 1 of the QSurveillance® database, and TPP SystmOne.

• Baselines represent seasonally expected levels of activity and are constructed from historical data since April 2012. They take into account any known substantial changes in data collection, population coverage or reporting practices. Gastroenteritis, diarrhoea and vomiting baselines also account for changes since the introduction of rotavirus vaccine in July 2013. Baselines are refreshed using the latest data on a regular basis.

Acknowledgements: We thank and acknowledge the University of Oxford, ClinRisk® and the contribution of

EMIS and EMIS practices. Data source: version 1 of the QSurveillance® database. We thank TPP, ResearchOne and the SystmOne GP practices contributing to this surveillance system.

Contact ReSST: [email protected]

GP In Hours Syndromic Surveillance System Bulletin.

Produced by: PHE Real-time Syndromic Surveillance Team 1

st Floor, 5 St Philips Place, Birmingham, B3 2PW Tel: 0344 225 3560 > Option 4 > Option 2 Fax: 0121 236 2215

Web: https://www.gov.uk/government/collections/syndromic-surveillance-systems-and-analyses

• A collection of new COVID-19 Snomed codes were released in March 2020 to facilitate the recording of patients presenting to primary care services with symptoms of COVID-19.

• The GPIH surveillance system monitors the use of these codes in a selection of TPP and EMIS practices across England.

• However, patients presenting with COVID-19 symptoms may be diagnosed using other clinical codes used by the GP.

• Therefore, the COVID-19-like indicator presented in this report is primarily for monitoring trends in GP consultations, and it must be interpreted in context with the other respiratory syndromic indicators presented in this report. The number/rate of COVID-19-like consultations should therefore not be used as an absolute count of those patients with COVID-19.

• During April 2020 a new COVID-19 Care Pathway template was introduced into GP systems that has affected recording of influenza-like illness (ILI), resulting in an increase in the consultation rate for ILI (figures 2a-c).

• All indicator trends should be interpreted with caution due to current national advice and guidance regarding access to GP surgeries and changes in clinical coding for COVID-19.

• Centre level COVID-19 consultation data should be interpreted with some caution. Different GP clinical system providers have different coding for COVID-19 and therefore rates can differ between Centres depending on the relative contribution of individual GP system providers in GPIH. Centre-specific data should not be compared across Centres: trends should only be interpreted for each individual Centre.

COVID-19 consultations