Food microbiology – a cultured approach · Food testing Food microbiology – a cultured approach...
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The scale of the taskIn any food company, ensuring microbiological
safety and quality is of paramount importance;
consequently much effort is focused on pathogen
detection. The challenge is a global one, as food
producers and retailers increasingly source mate-
rials from around the world. At an international
meeting held last year to set research priorities
on a broad range of foodborne diseases trans-
missible from animals to humans [1], scientists
noted that globalisation and integrated markets
are rapidly changing the way pathogens travel
from country to country. Although cross-border
transmission has been brought to wider atten-
tion with the recent incidence of avian influenza,
in fact diseases caused by organisms such as
Salmonella, Campylobacter and Escherichia coli
have a far greater impact on human health and
the economy. It was pointed out that in Germany
alone, there were 52,000 cases of Salmonella in
2005, and across the EU Campylobacter cases
continue to increase, making it the most common
foodborne disease in Europe.
As well as livestock products, fresh fruits and veg-
etables are often the source of infection, with well-
documented cases of E. coli O157:H7 occurring in
several countries. Prepared salads and vegetables
eaten raw can pose a particular risk.
Some of the economics of foodborne illness
are also worthy of consideration. For exam-
ple, in 2000 the Economic Research Service of
the United States Department of Agriculture
estimated the cost to the economy of five bac-
terial foodborne pathogens (Campylobacter,
Salmonella, E. coli O157 and non O157 STEC/
VTEC, and Listeria monocytogenes) to be
$6.9 billion [2].
There is a significant body of data that highlight
the human and economic impact of foodborne
disease. These data strongly support good
hygiene management at source and during food
processing. Clearly, the microbiology labora-
tory has a central role throughout the produc-
tion chain. In recent years there have been
considerable moves towards the development
of more reliable and more rapid methods for
the isolation, early detection, characterisation
and enumeration of micro-organisms. For the
food microbiologist this is, in practice, largely
about reducing the time taken to produce a total
viable count and the need to arrive quickly at a
presumptive negative or a presumptive positive
result for pathogenic organisms.
Rapid concentrationFor the most part, a food microbiology labora-
tory will be examining raw materials, finished
products or environmental samples that should
be free from pathogens and harbour only very
restricted numbers of potential spoilage organ-
isms. A standard enrichment process is normally
the first part of the protocol for isolating bacteria
from food samples, but for organisms such as E
coli O157:H7 the technique of immunomagnetic
separation (IMS) can give significant improve-
ments to the sensitivity of the method and help
accelerate the process of isolation.
E. coli O157:H7 is frequently found to be
responsible for outbreaks of potentially seri-
ous diarrhoeal illness. Associated with raw and
undercooked meats, contaminated vegetables and
cooked foods, it causes unpleasant bloody diar-
rhoea in most people but it can have more serious
consequences in children, older people and those
Food testing
Food microbiology – a cultured approachby Dr Simon Illingworth and Lisa Baldwin
Figure 1. E.coli 0157:H7 traditional culture method vs IMS culture method.
With food safety issues conti-
nuing to hit the headlines, food
hygiene and the role of the
microbiology laboratory in the
food industry are subject to
considerable scrutiny. The qua-
lity of a food lab’s output is not
simply a matter of ‘a job well
done’ - any failure to quickly
identify a potential pathogen
can have far reaching effects
on human health. We look here
at some recent developments in
approaches to culturing impor-
tant micro-organisms, including
the trend towards more rapid
enrichment procedures, some
of the practical implications of
recently issued ISO guidelines
for the preparation, production
and testing of culture media as
well as the growing use of
chromogenics.
with compromised immune systems, leading to the
development of the haemolytic uraemic syndrome.
Since the presence of even very low numbers of
the organism can produce symptoms, its identifi-
cation in foodstuffs is extremely important. IMS
can improve and speed up this process.
IMS is a sophisticated sorting process that can
be used for the concentration, isolation and/
or purification of micro-organisms from food
samples. It saves considerable amounts of time
by allowing the omission of part of the stand-
ard enrichment process needed when using
conventional culture techniques alone [Figure
1]. When isolating E. coli O157:H7 the use of
traditional culture methods often results in
overgrowth of plates with other sorbitol fer-
menting organisms. This makes it difficult to
identify low numbers of the generally sorbitol
negative O157:H7 colonies. Applying specific
IMS allows concentration of the target cells
from the larger samples (e.g. 1.0 mL) while at
the same time removing non-target cells, thus
greatly improving the chances of isolation.
Using the ISO 16654;2001 O157 method, target
organisms are generally obtained with IMS
after 6 h enrichment, although stressed cells
may require up to 18 h enrichment.
IMS techniques use antibody-coated micro-
scopic paramagnetic particles for the specific
immunomagnetic separation of micro-organ-
isms. The beads used in the Captivate system
(Lab M) for example, have a magnetite core
and a ceramic zirconium oxide coating. When
incubated with a sample, the antibody-coated
beads bind to cell surface antigens forming an
antibody-antigen complex between the beads
and the target molecules. Target cells are thus
“captured”. These are then separated using
a magnetic concentrator from background
organisms and interfering materials. Non-
specifically bound material is removed by
washing, and beads are then plated to selective
media or subjected to other analyses.
The introduction of ISO media
Alongside the desire for more rapid results is
the need to ensure quality and consistency
in the tools used in the lab. An area of grow-
ing importance in food microbiology is
the application of guidelines issued by the
International Standards Organisation (ISO)
for the preparation and production of cul-
ture media (ISO/TS 11133 Microbiology of
food and animal feeding stuffs). Part 1 of the
standard sets out general guidelines on quality
assurance for the preparation of culture media
in the laboratory and Part 2 provides practical
guidelines on their performance testing. The
guidelines take the form of a detailed techni-
cal specification that sets out the minimum
acceptable performance criteria and the meth-
odology and organisms required for quality
control of specific media.
The quality of a culture medium relies on a
number of factors: basic ingredients; correct
formulation; preparation procedures; elimi-
nation of contaminant microbial agents and
appropriate packaging and storage conditions.
ISO/TS 11133-2:2003 sets out the criteria and
methods recommended for performance testing.
It applies to both commercially
prepared ready-to-use and dehydrated media
as well as to culture media prepared from basic
constituents in the user’s laboratory. However,
different, more extensive methodologies apply
to manufacturers compared to end users. By
establishing minimum performance criteria and
stringent protocols for manufacturers, the aim
of the guidelines is for more consistent quality
of commercially made products with a conse-
quent reduction in the extent of quality testing
necessary by the user.
The influence of the International Standards
Organisation in the food industry has increased
significantly in recent years. While the ISO/
TS 11133-2:2003 guidelines currently take the
form of a detailed technical specification, it can
only be a matter of time before they become an
essential standard. Food industry laboratories
are already moving to use ISO-specified media
in the knowledge that these meet strict formula-
tion requirements and have undergone rigorous
testing by the manufacturer. Standardising and
maintaining the quality and consistent perform-
ance of culture media is an important step in
continuing to assure the microbiological safety
of food and food ingredients.
The advent of chromogenicsAlongside the more traditional culture media
now being developed to meet ISO guidelines,
there is a growing trend towards the use of chro-
mogenic media in the isolation of foodborne
pathogens. The first ISO standard specifying the
use of a chromogenic medium for this purpose
was in 2004 and related to the detection and
enumeration of Listeria monocytogenes.
Chromogenic media provide a rapid and accu-
rate means of isolating and enumerating target
micro-organisms based on the detection of
specific enzyme activities. Their development is
arguably one of the most significant advances
in the field of microbiological culture media
in recent years. Not only do they enable faster
detection of specific micro-organisms compared
with classical culture media, they also improve
sensitivity. Depending on the media type and
micro-organism involved, identification can be
accomplished with a much reduced require-
ment for sub-culture or confirmatory tests. The
principle behind the technology of chromogenic
media is straightforward: the activity of bacte-
rial enzymes specific to the micro-organism to
be identified is used to cleave synthetic chro-
mogenic substrates that are incorporated in the
culture media. Importantly, the chromogenic
substrates themselves are colourless; it is only
when they are cleaved by specific enzymes that
they release a characteristic coloured product.
This turns growing colonies containing the rel-
evant enzymes a distinct colour. By choosing an
appropriate selective base medium and adding
a suitable chromogenic substrate, it is possible
to design chromogenic media that allow the dif-
ferentiation and identification of highly specific
groups of micro-organisms.
Chromogenic substrates are formed by coupling
a suitable chromogen with a substrate appro-
priate to the target enzyme. In addition to its
chromogenic properties, the most important
features of a good chromogen are its stability
and insolubility. While the chromogen-substrate
compound itself must be soluble, once cleaved
the chromogen needs to be insoluble to ensure
a build up of colour within the target organism,
rather than diffusing (bleeding) into the sur-
rounding medium [Fig. 2]. In certain media the
interaction of two or more chromogens can be
exploited to create a diagnostic combination or
pallet of colours.
Looking aheadRecent EU hygiene legislation has introduced
the ‘farm to fork’ approach to food safety, and
elsewhere tougher testing regimes are also being
implemented to tackle the issues of foodborne
illness. The contribution of the microbiology
laboratory continues to be significant both in
the development of sampling, testing and man-
agement regimes, and in implementing techno-
logical and regulatory adva nces aimed
at ensuring consistent, reliable detection and
identification of causative organisms.
References1. BfR Federal Institute for Risk Assessment,
Berlin : Priority setting of foodborne and
zoonotic pathogens; 19-21 July 2006:
www.bfr.bund.de
2. USDA Economic Research Service:
Economics of foodborne illness. www.ers.
usda.gov/Briefing/FoodborneDisease/
The authorDr Simon Illingworth, Technical Manager Lisa Baldwin, Product ManagerLab M • Bury, Lancs, UK
Figure 2. Comparison of HAL002 Harlequin Listeria medium incorporating a chromogenic substrate (left) with standard Oxford formula-tion for Listeria isolation (right) following 24 hours incubation.