Figure 2 - Stanford Universitygenome- · BTG3 BTG family, member 3|AL049332 IRF1 interferon...
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Aortic Smooth Muscle Cells Hs578T Myofibroblasts HF-1, B cells Nor Tonsil Follicular Lymph Node HeLa Epithelial Cells HeLa Epithelial Cells Dermal Microvascular Endothelial Cells Dermal Microvascular Endothelial Cells SSc2 B (Male) I.U95A SSc2a B (Male) I.U95A2 SSc1 FA (Male) F.U95A SSc1a FA (Male) F.U95A2 SSc1 B (Male) G.U95A SSc1a B (Male) G.U95A2 SSc3 FA (Female) J.U95A SSc3a FA (Female) J.U95A2 SSc2 FA (Male) H.U95A SSc2a FA (Male) H.U95A2 SSc3 B (Female) K.U95A SSc3a B (Female) K.U95A2 SSc4 B (Female) M.U95A2 SSc4 FA (Female) L.U95A Nor4 FA (Female) T.U95A Nor3 FA (Female) R.U95A Nor3a FA (Female) R.U95A2 Nor4 B (Female) U.U95A Nor4a B (Female) U.U95A2 Nor1 B (Male) O.U95A Nor1a B (Male) O.U95A2 Nor1 FA (Male) N.U95A Nor1a FA (Male) N.U95A2 Nor2 B (Female) Q.U95A Nor2a B (Female) Q.U95A2 Nor2 FA (Female) P.U95A Nor2a FA (Female) P.U95A2 TRIM22 tripartite motif-containing 22|NM_006074 ITGA7 integrin, alpha 7|NM_002206 MEST mesoderm specific transcript mouse homolog|NM_002402 IGF1 insulin-like growth factor 1 somatomedin C|X57025 RARRES3 retinoic acid receptor responder tazarotene induced 3|NM_004585 GADD45B growth arrest and DNA-damage-inducible, beta|NM_015675 RAD50 RAD50 S. cerevisiae homolog|U63139 BTG3 BTG family, member 3|AL049332 IRF1 interferon regulatory factor 1|NM_002198 MYO1B myosin IB|AK000160 THY1 Thy-1 cell surface antigen|BC005175 FN1 fibronectin 1|X02761 WARS tryptophanyl-tRNA synthetase|NM_004184 SPUVE protease, serine, 23|NM_007173 MDK midkine neurite growth-promoting factor 2|NM_002391 SPON1 spondin 1, f-spondin extracellular matrix protein|AB018305 PTN pleiotrophin heparin binding growth factor 8, neurite growth-promoting factor 1|NM_002825 NID2 nidogen 2|NM_007361 CHN1 chimerin chimaerin 1|NM_001822 MNDA myeloid cell nuclear differentiation antigen|NM_002432 LAMA2 laminin, alpha 2 merosin, congenital muscular dystrophy|NM_000426 ITGA6 integrin, alpha 6|NM_000210 AKT1 v-akt murine thymoma viral oncogene homolog 1|NM_005163 Fk506-Binding Protein, Alt. Splice 2 IK IK cytokine, down-regulator of HLA II|NM_006083 CTSZ cathepsin Z|NM_001336 FGFR1 fibroblast growth factor receptor 1, Pfeiffer syndrome|NM_023109 ADPRTL1 ADP-ribosyltransferase NAD+; poly ADP-ribose polymerase-like 1|NM_006437 GOSR2 golgi SNAP receptor complex member 2|NM_004287 NNMT nicotinamide N-methyltransferase|NM_006169 RNASE6 ribonuclease, RNase A family, k6|NM_005615 ARL1 ADP-ribosylation factor-like 1|NM_001177 APC10 anaphase-promoting complex subunit 10|NM_014885 CSH1 chorionic somatomammotropin hormone 1 placental lactogen|NM_022640 TMOD tropomodulin|NM_003275 AP2B1 adaptor-related protein complex 2, beta 1 subunit|NM_001282 THBS4 thrombospondin 4|NM_003248 DLC1 deleted in liver cancer 1|AB051510 MD-2 MD-2 protein|NM_015364 RP2 retinitis pigmentosa 2 X-linked recessive|NM_006915 STK17A serine/threonine kinase 17a apoptosis-inducing|NM_004760 BIRC3 baculoviral IAP repeat-containing 3|AF070674 CD53 CD53 antigen|NM_000560 IGL@ immunoglobulin lambda locus|X57809 IGHG3 immunoglobulin heavy constant gamma 3 G3m marker|Y14737 F13A1 coagulation factor XIII, A1 polypeptide|NM_000129 ARHGDIB Rho GDP dissociation inhibitor GDI beta|NM_001175 DNASE1L3 deoxyribonuclease I-like 3|NM_004944 CASP1 caspase 1 | NM_033292 CYBB cytochrome b-245, beta polypeptide chronic granulomatous disease|NM_000397 ACTA1 actin, alpha 1, skeletal muscle|NM_001100 S100A7 S100 calcium-binding protein A7 psoriasin 1|NM_002963 HML2 macrophage lectin 2 calcium dependent|NM_006344 PRPS1 phosphoribosyl pyrophosphate synthetase 1|NM_002764 ATP5F1 ATP synthase, H+ transporting, mitochondrial F0 complex, subunit b, isoform 1|NM_001688 PDAP1 PDGFA associated protein 1|NM_014891 QKI homolog of mouse quaking QKI KH domain RNA binding protein|AL031781 SUPT6H suppressor of Ty S.cerevisiae 6 homolog|NM_003170 RABGGTB Rab geranylgeranyltransferase, beta subunit|NM_004582 GCS1 glucosidase I|NM_006302 SSPN sarcospan Kras oncogene-associated gene|AL136756 FGF7 fibroblast growth factor 7 keratinocyte growth factor|NM_002009 PLSCR1 phospholipid scramblase 1|NM_021105 ANGPTL2 angiopoietin-like 2|NM_012098 EMAPL echinoderm microtubule-associated protein-like|NM_004434 LTBP1 latent transforming growth factor beta binding protein 1|NM_000627 RECK reversion-inducing-cysteine-rich protein with kazal motifs|NM_021111 ALDH1A3 aldehyde dehydrogenase 1 family, member A3|NM_000693 HSOBRGRP leptin receptor gene-related protein|NM_017526 SPAK Ste-20 related kinase|NM_013233 CTGF connective tissue growth factor|NM_001901 FKBP5 FK506-binding protein 5|NM_004117 RNF10 ring finger protein 10|NM_014868 ACTN1 actinin, alpha 1|NM_001102 CD151 CD151 antigen|NM_004357 HXB hexabrachion tenascin C, cytotactin|NM_002160 TIMP1 tissue inhibitor of metalloproteinase 1, collagenase inhibitor|NM_003254 CALU calumenin|NM_001219 SDF1 stromal cell-derived factor 1|NM_000609 EDG2 endothelial differentiation, lysophosphatidic acid G-protein-coupled receptor, 2|AK022808 ENPP2 ectonucleotide pyrophosphatase/phosphodiesterase 2 autotaxin|NM_006209 EPS8 epidermal growth factor receptor pathway substrate 8|NM_004447 EPB41L3 erythrocyte membrane protein band 4.1-like 3|AB023204 COL6A1 collagen, type VI, alpha 1|NM_001848 CSPG2 chondroitin sulfate proteoglycan 2 versican|U16306 CDH11 cadherin 11, type 2, OB-cadherin osteoblast|D21255 COL5A2 collagen, type V, alpha 2|NM_000393 SELP selectin P granule membrane protein 140kD, antigen CD62|NM_003005 C1S complement component 1, s subcomponent|NM_001734 SGK serum/glucocorticoid regulated kinase|NM_005627 PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase lysine hydroxylase 2|NM_000935 CDH5 cadherin 5, type 2, VE-cadherin vascular epithelium|NM_001795 F2RL1 coagulation factor II thrombin receptor-like 1|BC012453 HTR1B 5-hydroxytryptamine serotonin receptor 1B|NM_000863 ARGBP2 Arg/Abl-interacting protein ArgBP2|NM_021069 ADSL adenylosuccinate lyase|NM_000026 NFIB nuclear factor I/B|NM_005596 TNFAIP6 tumor necrosis factor, alpha-induced protein 6|NM_007115 RORB RAR-related orphan receptor B|NM_006914 MCCC2 methylcrotonoyl-Coenzyme A carboxylase 2 beta|NM_022132 MCM5 minichromosome maintenance deficient S. cerevisiae 5 cell division cycle 46|NM_006739 HRH1 histamine receptor H1|NM_000861 CFLAR CASP8 and FADD-like apoptosis regulator|Y14039 CP ceruloplasmin ferroxidase|NM_000096 SALL2 sal Drosophila-like 2|X98834 PPT2 palmitoyl-protein thioesterase 2|AF020544 USP20 ubiquitin specific protease 20|NM_006676 DNASE1L1 deoxyribonuclease I-like 1|NM_006730 ITGB3 integrin, beta 3 platelet glycoprotein IIIa, antigen CD61|NM_000212 WRN Werner syndrome|NM_000553 PHRET1 PH domain containing protein in retina 1|NM_021200 DPP6 dipeptidylpeptidase VI|NM_001936 DF D component of complement adipsin|NM_001928 TGFBR3 transforming growth factor, beta receptor III betaglycan, 300kD|NM_003243 RASGRP1 RAS guanyl releasing protein 1 calcium and DAG-regulated|NM_005739 MOT8 hypothetical protein|NM_018836 SF3B1 splicing factor 3b, subunit 1, 155kD|NM_012433 HSA9761 putative dimethyladenosine transferase|NM_014473 EHHADH enoyl-Coenzyme A, hydratase/3-hydroxyacyl Coenzyme A dehydrogenase|NM_001966 GSTM1 glutathione S-transferase M1|NM_000561 NR1I3 nuclear receptor subfamily 1, group I, member 3|NM_005122 STK11 serine/threonine kinase 11 Peutz-Jeghers syndrome|NM_000455 PRKCM protein kinase C, mu|NM_002742 A B C D E F G Nor Fibroblasts, 0.1% serum Nor Fibroblasts, 0.1% serum Collagen I Nor5 Fibroblasts, FA Nor5 Fibroblasts, B SSc5 Fibroblasts, FA SSc5 Fibroblasts, B Figure 2
Transcript of Figure 2 - Stanford Universitygenome- · BTG3 BTG family, member 3|AL049332 IRF1 interferon...
Aortic Smooth Muscle CellsHs578T MyofibroblastsHF-1, B cellsNor TonsilFollicular Lymph NodeHeLa Epithelial CellsHeLa Epithelial CellsDermal Microvascular Endothelial CellsDermal Microvascular Endothelial Cells
SSc2 B (Male) I.U95ASSc2a B (Male) I.U95A2SSc1 FA (Male) F.U95ASSc1a FA (Male) F.U95A2SSc1 B (Male) G.U95ASSc1a B (Male) G.U95A2SSc3 FA (Female) J.U95ASSc3a FA (Female) J.U95A2SSc2 FA (Male) H.U95ASSc2a FA (Male) H.U95A2SSc3 B (Female) K.U95ASSc3a B (Female) K.U95A2SSc4 B (Female) M.U95A2SSc4 FA (Female) L.U95ANor4 FA (Female) T.U95ANor3 FA (Female) R.U95ANor3a FA (Female) R.U95A2Nor4 B (Female) U.U95ANor4a B (Female) U.U95A2Nor1 B (Male) O.U95ANor1a B (Male) O.U95A2Nor1 FA (Male) N.U95ANor1a FA (Male) N.U95A2Nor2 B (Female) Q.U95ANor2a B (Female) Q.U95A2Nor2 FA (Female) P.U95ANor2a FA (Female) P.U95A2
TRIM22 tripartite motif-containing 22|NM_006074ITGA7 integrin, alpha 7|NM_002206MEST mesoderm specific transcript mouse homolog|NM_002402IGF1 insulin-like growth factor 1 somatomedin C|X57025RARRES3 retinoic acid receptor responder tazarotene induced 3|NM_004585GADD45B growth arrest and DNA-damage-inducible, beta|NM_015675RAD50 RAD50 S. cerevisiae homolog|U63139BTG3 BTG family, member 3|AL049332IRF1 interferon regulatory factor 1|NM_002198MYO1B myosin IB|AK000160THY1 Thy-1 cell surface antigen|BC005175FN1 fibronectin 1|X02761WARS tryptophanyl-tRNA synthetase|NM_004184SPUVE protease, serine, 23|NM_007173MDK midkine neurite growth-promoting factor 2|NM_002391SPON1 spondin 1, f-spondin extracellular matrix protein|AB018305PTN pleiotrophin heparin binding growth factor 8, neurite growth-promoting factor 1|NM_002825NID2 nidogen 2|NM_007361CHN1 chimerin chimaerin 1|NM_001822MNDA myeloid cell nuclear differentiation antigen|NM_002432LAMA2 laminin, alpha 2 merosin, congenital muscular dystrophy|NM_000426ITGA6 integrin, alpha 6|NM_000210AKT1 v-akt murine thymoma viral oncogene homolog 1|NM_005163Fk506-Binding Protein, Alt. Splice 2IK IK cytokine, down-regulator of HLA II|NM_006083CTSZ cathepsin Z|NM_001336FGFR1 fibroblast growth factor receptor 1, Pfeiffer syndrome|NM_023109ADPRTL1 ADP-ribosyltransferase NAD+; poly ADP-ribose polymerase-like 1|NM_006437GOSR2 golgi SNAP receptor complex member 2|NM_004287NNMT nicotinamide N-methyltransferase|NM_006169RNASE6 ribonuclease, RNase A family, k6|NM_005615ARL1 ADP-ribosylation factor-like 1|NM_001177APC10 anaphase-promoting complex subunit 10|NM_014885CSH1 chorionic somatomammotropin hormone 1 placental lactogen|NM_022640TMOD tropomodulin|NM_003275AP2B1 adaptor-related protein complex 2, beta 1 subunit|NM_001282THBS4 thrombospondin 4|NM_003248DLC1 deleted in liver cancer 1|AB051510MD-2 MD-2 protein|NM_015364RP2 retinitis pigmentosa 2 X-linked recessive|NM_006915
STK17A serine/threonine kinase 17a apoptosis-inducing|NM_004760BIRC3 baculoviral IAP repeat-containing 3|AF070674CD53 CD53 antigen|NM_000560IGL@ immunoglobulin lambda locus|X57809IGHG3 immunoglobulin heavy constant gamma 3 G3m marker|Y14737F13A1 coagulation factor XIII, A1 polypeptide|NM_000129ARHGDIB Rho GDP dissociation inhibitor GDI beta|NM_001175DNASE1L3 deoxyribonuclease I-like 3|NM_004944CASP1 caspase 1 | NM_033292CYBB cytochrome b-245, beta polypeptide chronic granulomatous disease|NM_000397ACTA1 actin, alpha 1, skeletal muscle|NM_001100S100A7 S100 calcium-binding protein A7 psoriasin 1|NM_002963
HML2 macrophage lectin 2 calcium dependent|NM_006344PRPS1 phosphoribosyl pyrophosphate synthetase 1|NM_002764ATP5F1 ATP synthase, H+ transporting, mitochondrial F0 complex, subunit b, isoform 1|NM_001688PDAP1 PDGFA associated protein 1|NM_014891QKI homolog of mouse quaking QKI KH domain RNA binding protein|AL031781SUPT6H suppressor of Ty S.cerevisiae 6 homolog|NM_003170RABGGTB Rab geranylgeranyltransferase, beta subunit|NM_004582GCS1 glucosidase I|NM_006302SSPN sarcospan Kras oncogene-associated gene|AL136756FGF7 fibroblast growth factor 7 keratinocyte growth factor|NM_002009PLSCR1 phospholipid scramblase 1|NM_021105ANGPTL2 angiopoietin-like 2|NM_012098EMAPL echinoderm microtubule-associated protein-like|NM_004434LTBP1 latent transforming growth factor beta binding protein 1|NM_000627RECK reversion-inducing-cysteine-rich protein with kazal motifs|NM_021111ALDH1A3 aldehyde dehydrogenase 1 family, member A3|NM_000693HSOBRGRP leptin receptor gene-related protein|NM_017526SPAK Ste-20 related kinase|NM_013233CTGF connective tissue growth factor|NM_001901FKBP5 FK506-binding protein 5|NM_004117RNF10 ring finger protein 10|NM_014868ACTN1 actinin, alpha 1|NM_001102CD151 CD151 antigen|NM_004357HXB hexabrachion tenascin C, cytotactin|NM_002160TIMP1 tissue inhibitor of metalloproteinase 1, collagenase inhibitor|NM_003254CALU calumenin|NM_001219SDF1 stromal cell-derived factor 1|NM_000609EDG2 endothelial differentiation, lysophosphatidic acid G-protein-coupled receptor, 2|AK022808ENPP2 ectonucleotide pyrophosphatase/phosphodiesterase 2 autotaxin|NM_006209EPS8 epidermal growth factor receptor pathway substrate 8|NM_004447EPB41L3 erythrocyte membrane protein band 4.1-like 3|AB023204COL6A1 collagen, type VI, alpha 1|NM_001848CSPG2 chondroitin sulfate proteoglycan 2 versican|U16306CDH11 cadherin 11, type 2, OB-cadherin osteoblast|D21255COL5A2 collagen, type V, alpha 2|NM_000393SELP selectin P granule membrane protein 140kD, antigen CD62|NM_003005C1S complement component 1, s subcomponent|NM_001734SGK serum/glucocorticoid regulated kinase|NM_005627PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase lysine hydroxylase 2|NM_000935
CDH5 cadherin 5, type 2, VE-cadherin vascular epithelium|NM_001795F2RL1 coagulation factor II thrombin receptor-like 1|BC012453HTR1B 5-hydroxytryptamine serotonin receptor 1B|NM_000863ARGBP2 Arg/Abl-interacting protein ArgBP2|NM_021069ADSL adenylosuccinate lyase|NM_000026NFIB nuclear factor I/B|NM_005596TNFAIP6 tumor necrosis factor, alpha-induced protein 6|NM_007115
RORB RAR-related orphan receptor B|NM_006914MCCC2 methylcrotonoyl-Coenzyme A carboxylase 2 beta|NM_022132MCM5 minichromosome maintenance deficient S. cerevisiae 5 cell division cycle 46|NM_006739HRH1 histamine receptor H1|NM_000861CFLAR CASP8 and FADD-like apoptosis regulator|Y14039CP ceruloplasmin ferroxidase|NM_000096SALL2 sal Drosophila-like 2|X98834PPT2 palmitoyl-protein thioesterase 2|AF020544USP20 ubiquitin specific protease 20|NM_006676DNASE1L1 deoxyribonuclease I-like 1|NM_006730ITGB3 integrin, beta 3 platelet glycoprotein IIIa, antigen CD61|NM_000212WRN Werner syndrome|NM_000553PHRET1 PH domain containing protein in retina 1|NM_021200DPP6 dipeptidylpeptidase VI|NM_001936DF D component of complement adipsin|NM_001928TGFBR3 transforming growth factor, beta receptor III betaglycan, 300kD|NM_003243RASGRP1 RAS guanyl releasing protein 1 calcium and DAG-regulated|NM_005739MOT8 hypothetical protein|NM_018836SF3B1 splicing factor 3b, subunit 1, 155kD|NM_012433HSA9761 putative dimethyladenosine transferase|NM_014473EHHADH enoyl-Coenzyme A, hydratase/3-hydroxyacyl Coenzyme A dehydrogenase|NM_001966GSTM1 glutathione S-transferase M1|NM_000561NR1I3 nuclear receptor subfamily 1, group I, member 3|NM_005122STK11 serine/threonine kinase 11 Peutz-Jeghers syndrome|NM_000455PRKCM protein kinase C, mu|NM_002742
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Nor Fibroblasts, 0.1% serumNor Fibroblasts, 0.1% serum Collagen INor5 Fibroblasts, FANor5 Fibroblasts, BSSc5 Fibroblasts, FASSc5 Fibroblasts, B
Figure 2
