Dove Medical Press€¦ · Web viewSupplementary Figure 1. Heat map of differentially expressed...
Transcript of Dove Medical Press€¦ · Web viewSupplementary Figure 1. Heat map of differentially expressed...
![Page 1: Dove Medical Press€¦ · Web viewSupplementary Figure 1. Heat map of differentially expressed genes in gastric cancer. The GEO database (A), including 22 gastric cancer samples](https://reader036.fdocuments.net/reader036/viewer/2022071003/5fbfdd2591d5371e301c62ba/html5/thumbnails/1.jpg)
Supplementary Figure 1. Heat map of differentially expressed genes in gastric cancer. The GEO database
(A), including 22 gastric cancer samples and 8 normal gastritis epithelial samples, and, the TCGA database
(B), including 32 gastric cancer samples and 32 normal gastritis epithelial samples, were used.The blue
![Page 2: Dove Medical Press€¦ · Web viewSupplementary Figure 1. Heat map of differentially expressed genes in gastric cancer. The GEO database (A), including 22 gastric cancer samples](https://reader036.fdocuments.net/reader036/viewer/2022071003/5fbfdd2591d5371e301c62ba/html5/thumbnails/2.jpg)
portion of the figure indicates a gene that is lowly expressed in tumor sample compared to normal sample, and
the red portion indicates a gene that is highly expressed in tumor sample as compared with normal sample.
![Page 3: Dove Medical Press€¦ · Web viewSupplementary Figure 1. Heat map of differentially expressed genes in gastric cancer. The GEO database (A), including 22 gastric cancer samples](https://reader036.fdocuments.net/reader036/viewer/2022071003/5fbfdd2591d5371e301c62ba/html5/thumbnails/3.jpg)
Supplementary Figure 2. Intersection of differentially expressed genes from the GEO database and the
TCGA database. (A) The up-regulated genes from the different databases. (B) The down-regulated genes
from the different databases.
![Page 4: Dove Medical Press€¦ · Web viewSupplementary Figure 1. Heat map of differentially expressed genes in gastric cancer. The GEO database (A), including 22 gastric cancer samples](https://reader036.fdocuments.net/reader036/viewer/2022071003/5fbfdd2591d5371e301c62ba/html5/thumbnails/4.jpg)
Supplementary Figure 3. PPI network of the 96 differentially expressed genes.
![Page 5: Dove Medical Press€¦ · Web viewSupplementary Figure 1. Heat map of differentially expressed genes in gastric cancer. The GEO database (A), including 22 gastric cancer samples](https://reader036.fdocuments.net/reader036/viewer/2022071003/5fbfdd2591d5371e301c62ba/html5/thumbnails/5.jpg)
Supplementary Table 1. Clustering analysis of genes in PPI network by MCODE.
Cluster Score (Density Nodes) Nodes Edges Node IDs
1 7 7 21KIF11, NCAPD2, TOP2A, MCM3, MCM2,
KIF23, MAD2L1
2 4 4 6 RRS1, DDX10, BYSL, WDR43
3 3 3 3 NEK2, KIF2C, UBE2C
4 3 3 3 GINS1, RFC4, TRIP13
5 3 3 3 STIP1, CCT6A, HSPD1
6 3 3 3 PLAU, MKI67, NCL