DAVID david.abcc.ncifcrf/ Genome Biol. 2003;4(5):P3 Analysis of gene lists using DAVID

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VID tp:// david.abcc.ncifcrf.gov / Biol. 2003;4(5):P3 is of gene lists using DAVID /www.nature.com/nprot/journal/v4/n1/pdf/nprot.2008.211.pdf

description

DAVID http://david.abcc.ncifcrf.gov/ Genome Biol. 2003;4(5):P3 Analysis of gene lists using DAVID http://www.nature.com/nprot/journal/v4/n1/pdf/nprot.2008.211.pdf. Access tool from here. Upload dataset. Use test dataset. Dataset1_chicken affy.txt. Select Affy ID & gene list. - PowerPoint PPT Presentation

Transcript of DAVID david.abcc.ncifcrf/ Genome Biol. 2003;4(5):P3 Analysis of gene lists using DAVID

Page 1: DAVID david.abcc.ncifcrf/ Genome Biol. 2003;4(5):P3  Analysis of gene lists using DAVID

DAVID http://david.abcc.ncifcrf.gov/Genome Biol. 2003;4(5):P3 Analysis of gene lists using DAVIDhttp://www.nature.com/nprot/journal/v4/n1/pdf/nprot.2008.211.pdf

Page 2: DAVID david.abcc.ncifcrf/ Genome Biol. 2003;4(5):P3  Analysis of gene lists using DAVID

Access tool from here

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Upload dataset

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Dataset1_chicken affy.txt

Use test dataset

Select Affy ID & gene list

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Select species

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Select Gallus gallus as background

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Results

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Annotation chart view

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(http://david.abcc.ncifcrf.gov/helps/functional_annotation.html#summary)

What the chart means

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Save results

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Results Download Input IDs

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Results

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Results

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What the results mean

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Downlaod rEsults

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Access the tool

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Check supported data types

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Start analysis

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Use chicken affy dataset 1 Choose species Data typeType of test

Email notification optional

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Search status

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ResultsResults browse options

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Flat Form

p-value

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Plain Text

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Browse results in graph mode

Expandimmune systemprocess

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Tree View

Color scale is based on p-value

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User manual

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Earlier version

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Supported data types

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Dataset1_chicken affy.txt will not work as affy IDs are not an option that is available when using earlier version of the tool

OnlyChicken Geneproductsaccepted