Data Management, Workflows, & Scientific Information Systems · 2 Data Management, Workflows, &...

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ORNL is managed by UT-Battelle for the US Department of Energy Data Management, Workflows, & Scientific Information Systems Shelly Ren March 24, 2017 Neutron Day Seminar Series: Data and Instrument Software

Transcript of Data Management, Workflows, & Scientific Information Systems · 2 Data Management, Workflows, &...

Page 1: Data Management, Workflows, & Scientific Information Systems · 2 Data Management, Workflows, & Scientific Information Systems Dear NScD staff, The Neutron Sciences Directorate Oracle

ORNL is managed by UT-Battelle

for the US Department of Energy

Data Management,

Workflows, &

Scientific Information

Systems

Shelly Ren

March 24, 2017

Neutron Day Seminar Series: Data and

Instrument Software

Page 2: Data Management, Workflows, & Scientific Information Systems · 2 Data Management, Workflows, & Scientific Information Systems Dear NScD staff, The Neutron Sciences Directorate Oracle

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Dear NScD staff,

The Neutron Sciences Directorate Oracle systems will be unavailable for maintenance during the

following dates and times:

· Tuesday, Jan 24th, from 11 a.m. to 3 p.m.: Accelerator PROD database

Systems impacted: Accelerator Operations Administration/Bypass Request,

Diagnostics/Physics applications, Document Number Reservation, Electronic Logbook,

eMod, ICS NetReg, ISDD Portal, Inventory Control, MPS Trips, MPS Audits, PSSO Wireless

Handheld Meter Readings Entry, PSSO Meter Readings Report, Power Supply configuration

generation, PV Logger, RF Cavity trips, SCORE, SNS channels/status, SNS Service Request

Web Interface, SNS Work Order Closeout, and Web reports including ROCS.

· Monday, Jan 30th, from 9 a.m. to 1 p.m.: SCPROD database

Systems impacted: ICAT, Instrument alarm application, Channel Archiver, Legacy translation

monitor, and SNS instrument monitor.

· Tuesday, Jan 31st, from 1 p.m. to 5 p.m.: XPROD and COTS databases

Systems impacted: IPTS including User Survey, ITEMS, Express, PuSH, SAC, IHC Operations,

IHC Activities, and XWHOS, IPTS information on Guest Port, Sample Environment equipment

report, DataStream, ProjectWise, and Primavera.

If you have any questions or concerns, please contact us at [email protected].

Yours,

Scientific Information Systems Team

Accelerator operations

Science operations

User Program; Asset, document

management

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Improved Work Control System

Work requests are split into five general areas:1. “Accelerator” for all work requested for the SNS

accelerator2. “Facility Maintenance” for all building and associated

infrastructure work requests in the Chestnut Ridge Complex

3. “Neutron Beam Lines” for all work requested for the Neutron Beam Lines including associated instruments and support systems

4. “Target” for all work requested for the SNS target systems

5. “Test Facilities” for all OM&S work requested

Work Planning

Work OrderWork

Request

All my work requests data and status

Information on the work order: task

leader, group, & status

Page 4: Data Management, Workflows, & Scientific Information Systems · 2 Data Management, Workflows, & Scientific Information Systems Dear NScD staff, The Neutron Sciences Directorate Oracle

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Integrated Scientific Information Systems

Catalog

IPTSipts.ornl.gov

Experiment Readiness

User Management

ICAT

ESSUser

SurveyInstr.

Training

ORNL User Portal

user.ornl.gov

ORNL Neutrons website

neutrons.ornl.gov

PuSH

ITEMSitems.ornl.gov

ET (admin)et.ornl.gov

EXPRESSexpress.sns.gov

Data Portal

Data Reduction and Analysis

SACsac.ornl.gov

Indexing

Indicoconference.sns

.gov

Data Acquisition

IHCihc.ornl.gov

Page 5: Data Management, Workflows, & Scientific Information Systems · 2 Data Management, Workflows, & Scientific Information Systems Dear NScD staff, The Neutron Sciences Directorate Oracle

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Integrated Scientific Information Systems-- Integrated Proposal Tracking System (IPTS)

• Experiment planning

• ORCID integration

• DOI landing page

Page 6: Data Management, Workflows, & Scientific Information Systems · 2 Data Management, Workflows, & Scientific Information Systems Dear NScD staff, The Neutron Sciences Directorate Oracle

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Integrated Scientific Information Systems-- Experiment Resource Scheduling System (EXPRESS)

Page 7: Data Management, Workflows, & Scientific Information Systems · 2 Data Management, Workflows, & Scientific Information Systems Dear NScD staff, The Neutron Sciences Directorate Oracle

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Integrated Scientific Information Systems-- Publication of SNS and HFIR (PuSH)

myPuSH for NScD staff

Page 8: Data Management, Workflows, & Scientific Information Systems · 2 Data Management, Workflows, & Scientific Information Systems Dear NScD staff, The Neutron Sciences Directorate Oracle

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Integrated Scientific Information Systems-- Engagement Tracking Tool (ET)

Page 9: Data Management, Workflows, & Scientific Information Systems · 2 Data Management, Workflows, & Scientific Information Systems Dear NScD staff, The Neutron Sciences Directorate Oracle

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Integrated Scientific Information Systems-- Instrument Hall Coordinator System (IHC)

• Log IHC specific activities• Log notable events/issues and

update SNS/HFIR eLogs• Send notifications to users on any

significant beam status changes• Record instrument downtime

Page 10: Data Management, Workflows, & Scientific Information Systems · 2 Data Management, Workflows, & Scientific Information Systems Dear NScD staff, The Neutron Sciences Directorate Oracle

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Data Management and Workflows@ SNS

Translation Service

Active MQ Server

Workflow Manager

Posts new run

Listens and kicks off post processes

• catalog.data_ready• reduction.data_ready

Monitorhttps://webmon.sns.gov

Post Processor

ICAT

PostgreSQL DB

Oracle DB

Reduction Service

• catalog.started• catalog.complete• reduction.started• reduction.complete

catalog metadata

reduce data

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Data Management and Workflows-- Data archiving tool

• Archive data for HFIR instruments by syncing files from "source" to "destination" directories

• Apply ACL / permissions set • Catalog metadata per instrument's "catalog policy"

• Create IPTS and shared directories for scheduled experiments• Reset permissions for given instrument & IPTS

sync

Page 12: Data Management, Workflows, & Scientific Information Systems · 2 Data Management, Workflows, & Scientific Information Systems Dear NScD staff, The Neutron Sciences Directorate Oracle

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Data Management and Workflows

-- Catalog System

Web services designed for

NDAV applications

New services:• Provide

metadata for portal users

• Index metadata to enable free text search

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Data Management, Workflows, & Scientific Information Systems

-- Initiatives, ideas and path forward

• Usability study and expert evaluation of web applications

• Data Science - Analysis/Analytics/Intelligence

o Equipment usage (i.e. sample environment)

o Publications / beam line

o Institutions representation and productivity

• A new data portal

o Globus API for data transfer

o Remote jobs

o Metadata annotation

o DOI on demand for PIs to publish datasets

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Please feel free to contact us at [email protected].