Cytoskeleton BME 615 - Tissue Mechanics Ray Vanderby Figures in this document are taken from various...

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Cytoskeleton BME 615 - Tissue Mechanics Ray Vanderby Figures in this document are taken from various sources including copyrighted material and are for educational purposes only.

Transcript of Cytoskeleton BME 615 - Tissue Mechanics Ray Vanderby Figures in this document are taken from various...

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Cytoskeleton

BME 615 - Tissue MechanicsRay Vanderby

Figures in this document are taken from various sources including copyrighted material and are for educational purposes only.

Page 2: Cytoskeleton BME 615 - Tissue Mechanics Ray Vanderby Figures in this document are taken from various sources including copyrighted material and are for.

Cell Theory

• The Cell is the smallest biological entity that retains the characteristics of life, i.e. the basic unit of life.

• All organisms are composed of one or more cells.

• New cells arise only from cells that exist.

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Cell

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Cell Mitosis

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Nature of cells

• Each cell has common components– Plasma membrane– Region containing DNA– Cytoplasm– Organelles– Cytoskeleton

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Cell Types

• Prokaryotic cells– No nucleus –nuclear region not separated by

membrane from the cytoplasm– Bacteria

• Eukaryotic cells (only these are considered)– Nucleus present which is separated by a

membrane from the cytoplasm– All higher life forms

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Cell Membranes

• Plasma membrane and internal membrane

• Lipid bilayer – structure and a molecular barrier

• Proteins – embedded or on surface; carry out most membrane functions

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Cell Membranes

• Cell membrane has many functions– Serves as protection layer for interior of cell

– Determines how cell will act and with whom it will act– Membrane connects to other cells with gap junctions

• enables cells to share information

– Regulates exchange between exterior environment and cell contents for homeostasis

• Phospholipid layer of membrane

– Repels all polar molecules

– Regulates amounts of substances that cell needs. • Polar, hydrophilic head of phospholipid is attracted to water

• Non-polar, hydrophobic tail of phospholipid repels water.

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Cell Membrane Transport

Two transport systems occur across cell membrane.• Passive transport

– This transport moves substances across the membrane while going down a gradient concentration and

– It does not require any energy. – Simple diffusion occurs which is the diffusion of water or

dissolved gasses. – Passive transport creates facilitated diffusion which is the

diffusion of molecules through a carrier protein. – Allows for osmosis across the membrane. This is the diffusion of

water across a permeable membrane which is more permeable to water than dissolved molecules.

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Cell Membrane Transport

• Active transport is 2nd transport mechanism across membrane – Requires energy for transport (ATP)– Moves substances (small individual molecules or ions ) across a

membrane mostly against a concentration gradient – Endocytosis and Exocytosis occur.

• Endocytosis is movement of large substances into cell by surrounding extracellular material. Membrane creates membrane bound sacs that go into cytoplasm.

• Exocytosis is movement of large substances outside cell by encircling the material in a membrane sac. Sac moves to surface of the cell and is diffused away when the sac fuses with plasma membrane and is opened to the outside.

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Cytoplasm

• Watery environment inside the cell. • Composition

– salts – organic molecules, including many enzymes to catalyze reactions – water

• Thick soup or gel of proteins, carbohydrates, salts, sugars, lipids, nucleotides, and amino acids

• Plasma membrane separates the cytoplasm from exterior cell environment and encircles compartments in interior of cell.

• Bacterial cytoplasm contains ribonucleic acid (RNA), on which proteins are sythesized.

• Contains other organelles which store and produce energy• Contains everything within the cell, except the nucleus • Storage place within the cell

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Cytosol

• The cytoskeleton and cytosol are structural elements that provide the cell with its structure.

• Cytosol is main component of cytoplasm.• Both cytoskeleton and cytosol, are "filler" structures that do not

contain essential biological molecules but perform structural functions.

• Cytosol – Comprises more than 50% of a cell's volume – Provides structural support – Provides site for protein synthesis to occur – Provides a home for centrosomes and centrioles

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Surface to Volume Ratios

• Size constraints– When a cell expands in diameter, its volume increases

more rapidly than its surface area.– Surface area to volume ratio must be such that nutrients

can flow in and wastes flow out.

• Shape constraints– Spherical cells have less surface area than irregularly

shaped or skinny cells.– The smaller or more stretched out the cell, the more

efficiently materials can cross its surface.

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Eukaryotic Cells

• Contain internal membranes and organelles• Organelles

– Physically separate chemical reactions (space)– Temporally separate chemical reactions (time)

• Plants and Animals– Plants: cell walls, choroplasts, central vacuoles– Animals: no cell walls, no choroplasts, no

central vacuoles

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Common Organelles

• Nucleus

• Ribosomes

• Endoplasmic Reticulum

• Golgi Bodies

• Diverse vesicles

• Mitochondria

• Cytoskeleton

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Nucleus

• Nucleolus

• Nuclear Membrane

• Chromosomes

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Cytomembrane System

• Endoplasmic Reticulum– Smooth ER– Rough ER

• Peroxisomes

• Golgi Bodies

• Lysosomes

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Mitochondria

• Powerhouse of cell

• ATP production

• Structure– Outer membrane– Outer compartment– Inner membrane– Inner compartment

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Cytoskeleton

• Composition– Microtubules – Intermediate Filaments – Microfilaments

• Cell Movements– Pseudopods– Flagella– Cilia

• Microtubule Organizing Centers– Centriole

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Tensegrity concept for cytoskeletonD. Engber theory

Tensegrity is a concept by J. Buckminister Fuller in which a stabile structure is created from compression tubes and tensile cables.

D. Engber suggested that the cytoskeleton is made up this way – allowing it to rapidly change shapeControversial

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Cytoskeleton

Network of protein fibers in cytoplasm that – Gives shape to a cell

• Without CSK, cell would have no shape

• Shape necessary for cell to function and stay in homeostasis

– Holds and moves organelles

– Involved in cell movement

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CytoskeletonCultured epithelial cells. Microtubules are green, actin is red, DNA blue.

(Image by Steve Rogers)

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Cytoskeleton and Cytoplasm

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Microtubules• Microtubules are tubes made up of spiraling, two-

part subunits.  • Each spiral has 13 dimers.• Made of and tubulin.  • Aids in movement of

– Chromosomes – Organelles– Cilia – Flagella

• MTOC - where nucleation of (-) end occurs. Then, polymerization proceeds outward to (+) end.

-tubulin combines with several other proteins to become -tubulin ring complex (-turc) at (-) end for nucleation to start / tubulin dimers in polymerization.

• Polymeration grows outward on (+) end.• GTP binds to -tubulin stabilizing tubes, forming

GTP-tubulin. • GTP binding to tubulin can hydrolize (GDP-

tubulin) which can lead to rapid disassociation of microtubule (depolymerization and shrinkage).

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Microtubules

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Microtubules

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Microtubules

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Microtubules

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Microtubules

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Microtubules – temporal changes

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Golgi to RER vesicle RER to Golgi vesicle

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Molecular Motors

• Dynein – movement along microtubules from + to –

• Kinesin – movement along microtubules from – to +

• Myocin – movement along actin fibers

Motor proteins that use ATP for energy to drive momements

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Tubulin spindle during mitosis

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Microtubule functions

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Microtubule functions

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Intermediate Filaments

• Intermediate filaments are made of eight subunits in rope-strands. 

• The proteins structure varies with different tissue types. 

• They help maintain shape. • They support nerve cell extensions.• They attach cells together.

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Intermediate Filaments - Keratin

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Microfilaments

• Twisted double strands of proteins (actin).

• From 7 nm to several cm long. 

• Functions include – Contraction of muscle

contraction– Maintenance of cell shape– Transport within cytoplasm

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Microfilament networks

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Function of actin in cell motility

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Actin filaments

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Actin in endothelial cells

no flow (left) and flow (right)

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Actin filaments

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Actin filaments

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Cell to Cell

• Junctions between animal cells– Tight junctions– Adhering junctions– Gap junctions