Citric Acid Cycle What is the fate of pyruvate?€¦ · Sir Hans Adolf Krebs (1900 - 1981) - German...
Transcript of Citric Acid Cycle What is the fate of pyruvate?€¦ · Sir Hans Adolf Krebs (1900 - 1981) - German...
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Citric Acid Cycle What is the fate of pyruvate?
Depends on the O2 conditions of the cell
Aerobic conditions: - pyruvate enters citric acid cycle (TCA cycle), reduced to CO2 to generate reducing agents for ATP production (next lecture series)
Anaerobic conditions: 1. Anaerobic glycolysis, the production of lactate from pyruvate. Occurs in muscles
2. Alcohol fermentation, production of ethanol from pyruvate
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Citric Acid Cycle Krebs cycle
TCA cycle - - cycle intermediates have 3 carboxylic groups
Metabolic intermediates of TCA cycle can be used for anabolism
In terms of energy production: TCA cycle produces reducing agents, ____________________ ___________________________.
- we will study each reaction in detail. - you must know:
- each enzyme, name & order - structure of each metabolite
Amphibolic - plays roles in both __________ ________________________________
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Citric Acid Cycle
Sir Hans Adolf Krebs (1900 - 1981)
- German born biochemist
- In 1933 he was barred from carrying out science in Germany because he was Jewish
- emigrated to England and became scientist at Cambridge
- in 1937 published paper in Biochemistry Journal describing citric acid cycle
- Nobel Prize in Physiology, 1953
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Citric Acid Cycle
Glucose not only input of pyruvate for TCA cycle
- -
All provide e- for reduction of _____________________
Catabolism can be broken down into 3 stages
TCA Cycle is central to catabolism and anabolism
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Cellular Compartmentalization of glucose oxidation
Citric Acid Cycle
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Mitochondria -
Citric Acid Cycle
Double membrane system - outer membrane, separates
- inner membrane, creates structure
- matrix, region
Reactions of TCA cycle take place in
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Citric Acid Cycle
Steps before TCA cycle 1. pyruvate is transported into mitochondria
- NAD+ is reduced to NADH
Purpose of CoA?
2.- pyruvate dehydrogenase removes ______________ _____________________. - acetate bound to ___________, called __________________
- __________________ from 3 carbon pyruvate derived from 6 carbon glucose
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________- allows next reaction to be __________ favorable and to take place
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Citric Acid Cycle Step 1 : formation of citrate
- reaction carried out by the enzyme
- acetate from acetyl-CoA is combined with oxaloacetate
- energy input not required due to thiol (S) bond between _______________
- citrate has __________________ __________
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Citric Acid Cycle Step 2 : isomerization of citrate to isocitrate
- reaction carried out by the enzyme
- requires __________
- OH moved to _________ of isocitrate
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Citric Acid Cycle Step 3 : α-ketoglutarate formation
- reaction carried out by the enzyme
- second
- one remaining C from __________
- NAD+ is reduced to NADH
1. oxidation
2. decarboxylation
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Citric Acid Cycle Step 4 : succinyl-CoA formation
- reaction carried out by the enzyme
- third
- no remaining C from pyruvate
- 5 carbon α-ketoglutarate to 4 carbon succinyl
- α-ketoglutarate oxidation to reduce
- remainder of TCA cycle 11
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Citric Acid Cycle Step 5 : succinate formation
- reaction carried out by the enzyme
- substrate level phosphorylation
- only in TCA cycle
- Pi is by nucleotidediphosphate kinase
- Pi and energy from succinyl-CoA breakage is used to form GTP
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Citric Acid Cycle Step 6 : fumarate formation
- reaction carried out by the enzyme
- bond between C 2 & 3 is oxidized to double bond
- FAD acts as __________ instead of NAD+
- enzyme bound to mitochondrial
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Citric Acid Cycle
- reaction carried out by the enzyme
- double bond of fumarate is ______________________
Step 7 : Malate formation
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Citric Acid Cycle
- reaction carried out by the enzyme
- oxaloacetate can now react with another _______________
-
- NAD+ reduced to NADH
Step 8 : Oxaloacetate regeneration
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Citric Acid Cycle
- Reducing agents formed
1 pyruvate to acetyl-CoA 1 step 3, isocitrate to α-ketoglutarate 1 step 4, α-ketoglutarate to succinyl-CoA 1 step 8, malate to oxaloacetate
- 1 pyruvate to acetyl-CoA
1 step 3, isocitrate to α-ketoglutarate 1 step 4, α-ketoglutarate to succinyl-CoA
- step 6, succinate to fumarate
After succinyl-CoA, cycle continues to reform oxaloacetate
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Citric Acid Cycle
- 4 NADH = ( for each NADH) Eventual ATP Production
Total from one pyruvate
Total from one glucose
- 1 FADH2 =
- 1 GTP =
Next lecture series will deal with how reducing agents can be used to produce ATP
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Citric Acid Cycle Control of the TCA cycle
Pyruvate dehydrogenase
- Inhibited by _____________ _____________ _____________
- When these are abundant energy production ___________
- activated by
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Citric Acid Cycle Control of the TCA cycle
Citrate Synthase - produces citrate
- Allosterically inhibited by many compounds ______________ ______________ ______________ ______________
- When these are abundant energy production is not needed
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Citric Acid Cycle Control of the TCA cycle
Isocitrate Dehydrogenase - produces α-ketoglutarate
- Allosterically stimulated by ___________ ___________
- When these are abundant energy production _________
- allosterically inhibited by ___________ ___________
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Citric Acid Cycle Control of the TCA cycle
α-Ketoglutarate Dehydrogenase - __________________
- When these are abundant energy production is not needed
- allosterically inhibited by ______________ ______________ ______________
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Citric Acid Cycle Control of the TCA cycle
Relationship between energy requirements and enzyme activity
[ATP], [NADH]
Enzyme activity
[ADP], [NAD+]
[ATP], [NADH]
Enzyme activity
[ADP], [NAD+]
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Citric Acid Cycle Citric Acid Cycle’s role in Catabolism/Anabolism
Catabolism Inputs to TCA cycle from many sources
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Citric Acid Cycle Citric Acid Cycle’s role in Catabolism/Anabolism
Anabolism
PEP and malate can be transported to cytoplasm and ______________ __________________________
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Citric Acid Cycle Citric Acid Cycle’s role in Catabolism/Anabolism
Anabolism
- Citrate can be transported
- converted
- made into (lecture 17)
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Citric Acid Cycle Citric Acid Cycle’s role in Catabolism/Anabolism
Anabolism
Many of the TCA cycle intermediates can be used
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Citric Acid Cycle Citric Acid Cycle’s role in Catabolism/Anabolism
Obviously TCA cycle is a central player in both catabolism and anabolism.
During anabolism TCA intermediates
Need to be
Otherwise cycle shuts down
Anaplerotic reaction - reaction that __________________________ __________________________
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Citric Acid Cycle Citric Acid Cycle’s role in Catabolism/Anabolism
Main anaplerotic rxn - carboxylation of
TCA cycle is mainly replenished with
Carried out by pyruvate carboxylase
High levels of acetyl-CoA activates __________________
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Citric Acid Cycle
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