BOB LUEBKE CARDIOPULMONARY AND IMMUNOTOXICOLOGY BRANCH NHEERL, ORD, US EPA A Draft Immunotoxicity...

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BOB LUEBKE CARDIOPULMONARY AND IMMUNOTOXICOLOGY BRANCH NHEERL, ORD, US EPA A Draft Immunotoxicity Vocabulary for ToxRefDB

Transcript of BOB LUEBKE CARDIOPULMONARY AND IMMUNOTOXICOLOGY BRANCH NHEERL, ORD, US EPA A Draft Immunotoxicity...

Page 1: BOB LUEBKE CARDIOPULMONARY AND IMMUNOTOXICOLOGY BRANCH NHEERL, ORD, US EPA A Draft Immunotoxicity Vocabulary for ToxRefDB.

B O B L U E B K E

C A R D I O P U L M O N A RY A N D I M M U N O TO X I C O L O G Y B R A N C H

N H E E R L , O R D , U S E PA

A Draft Immunotoxicity Vocabulary for ToxRefDB

Page 2: BOB LUEBKE CARDIOPULMONARY AND IMMUNOTOXICOLOGY BRANCH NHEERL, ORD, US EPA A Draft Immunotoxicity Vocabulary for ToxRefDB.

ToxRefDB Vocabulary

8834 rows, endpoints for cancer, developmental and reproductive toxicityEndpoints selected to describe effects, based on toxicity data from testing hundreds of chemicals In rats and rabbits (http://actor.epa.gov/toxrefdb/faces/BasicInfo.jsp)Search by endpoint (study type, species, effect type) to return list of chemicals associated with effect(http://actor.epa.gov/toxrefdb/faces/SearchByEndpoint.jsp)

Endpoint super category

Endpoint category

Endpoint subcategory Endpoint class

Endpoint subclass Effect type Effect type Effect type Target site a Target site b

Developmental Reproductive Developmental

DevelopmentalMalformation Cardiovascular Heart Developmental Heart

Defect A-V Septum

Septum Interventricular [Not Specified]

Developmental Reproductive Developmental

DevelopmentalNeurotoxicity

Learning and Memory Memory

Learning and Memory Maze Sector entries Memory Radial-arm maze

Developmental Reproductive Developmental PathologyGross

Reproductive Male Epididymis

Pathology (Gross) Epididymis Reduced size Left [Not Specified]

Developmental Reproductive Developmental

Developmental Malformation General Other Developmental Thymus Small [Not Specified] [Not Specified]

Systemic Carcinogenic Maternal

Pathology Non-Proliferative Endocrine Thymus

Pathology (Non-neoplastic) Thymus Atrophy [Not Specified] [Not Specified]

Page 3: BOB LUEBKE CARDIOPULMONARY AND IMMUNOTOXICOLOGY BRANCH NHEERL, ORD, US EPA A Draft Immunotoxicity Vocabulary for ToxRefDB.

Immunotoxicity Classification

Immunosuppression (immunostimulation)Allergic hypersensitivityAutoimmunityEndpoints are relevant for adult and

developmental exposure effects

Page 4: BOB LUEBKE CARDIOPULMONARY AND IMMUNOTOXICOLOGY BRANCH NHEERL, ORD, US EPA A Draft Immunotoxicity Vocabulary for ToxRefDB.

Immunotox Endpoint Interpretation

Indicator Assessment Function InterpretationLymphoid organ data Weights, cellularity,

viability, architectureMaturation, differentiation

Suggestive

Cell surface markers Flow cytometry Relative distribution by function/type

Suggestive/confirmatory

Cytokine production mRNA, protein, activity

Regulation, modulation of cell proliferation, maturation, function

Suggestive/confirmatory

Innate immunity Activation, phagocytosiskilling, mediator production

Resistance to infection

Intracellular & extracellular infection, viral infections, tumors

Antibody synthesis TDAR: “PFC” or ELISA response

Resistance to infection Toxin neutralization

Extracellular infection, viral infections, tetanus

Cell mediated immunity

Delayed hypersensitivityCytotoxicityCytokine production

Resistance to infection, neoplasia“Help” for Ig response

Intracellular infection, viral infections, tumors

Sp

eci

fici

ty, C

om

ple

xity

Page 5: BOB LUEBKE CARDIOPULMONARY AND IMMUNOTOXICOLOGY BRANCH NHEERL, ORD, US EPA A Draft Immunotoxicity Vocabulary for ToxRefDB.

Draft immunotox vocabulary content

Borrowed entries from exiting ToxRefDB that may indicate immune system effects

Added new categories, subcategories endpoint classes and subclasses, effect types and targets that may be generated in immunotoxicity studies

Page 6: BOB LUEBKE CARDIOPULMONARY AND IMMUNOTOXICOLOGY BRANCH NHEERL, ORD, US EPA A Draft Immunotoxicity Vocabulary for ToxRefDB.

ToxRefDB Itox Vocabulary

Endpoint super category

Endpoint category

Endpoint subcategory Endpoint class

Endpoint subclass Effect type Effect type Effect type Target site a Target site b

ImmunotoxicityAdult

ImmunotoxicityImmuno-

suppression Host resistanceBacterial challenge

Immuno-suppression

Humoral Immunity

Infection resistance B Lymphocyte IgM

ImmunotoxicityAdult

immunotoxicityImmuno-

suppressionImmune Function

Humoral Immunity

Immuno-suppression

Humoral Immunity

Infection resistance B Lymphocyte IgM

ImmunotoxicityAdult

immunotoxicityImmuno-

suppressionImmune Function

Cellular Immunity

Immuno-suppression

Cellular Immunity

Infection/tumor resistance

T helper 1 Lymphocyte

Delayed Hypersensitivity

ImmunotoxicityAdult

immunotoxicityImmuno-

suppressionImmune Function Innate immunity

Immuno-suppression Innate immunity

Infection/tumor resistance

Natural Killer Cell Target cell lysis

ImmunotoxicityAdult

immunotoxicityImmuno-

suppressionImmune

ObservationLymphocyte Proliferation

Immuno-suppression

Cellular Immunity

Mitogen Response T Lymphoocyte

Cellular Immunity

ImmunotoxicityAdult

immunotoxicityImmuno-

suppressionImmune

Observation HematologyImmuno-

suppression HematologyComplete Blood

Count Leukocyte Cell Number

ImmunotoxicityAdult

ImmunotoxicityImmuno-

suppressionIn-Life

Observations Clinical SignsIn-Life

Observations Clinical SignsSkin Lesion (infection) HI IgM

ImmunotoxicityAdult

immunotoxicityImmuno-

suppression ImmuneFunctionHumoral Immunity

Immunostimulation

Humoral Immunity Stimulation Dendritic Cell

Infection/Autoimmunity

ImmunotoxicityAdult

ImmunotoxicityAllegic

Hypersensitivity ImmuneFunctionHumoral Immunity

Antibody synthesis

Humoral Immunity Anaphylaxis Lung IgE

ImmunotoxicityAdult

ImmunotoxicityAllegic

Hypersensitivity ImmuneFunctionLocal Lymph Node Assay ImmuneFunction

Contact hypersensitivity

Contact hypersensitivity Lymph Node Proliferation

ImmunotoxicityAdult

ImmunotoxicityAllegic

Hypersensitivity ImmuneFunctionMouse Ear

Swelling TestImmune Function

Contact hypersensitivity

Contact hypersensitivity Ear Swelling

ImmunotoxicityAdult

immunotoxicity AutoimmunityImmune

ObservationHumoral Immunity

Antibody synthesis Self Antigens Autoimmunity Autoantibody Anti-dsDNA

ImmunotoxicityAdult

immunotoxicity AutoimmunityImmune

ObservationHumoral Immunity Autoimmunity Kidney Autoimmunity kidney Proteinuria

ImmunotoxicityDevelopmental immunotoxicity Same as adult Same as adult Same as adult Same as adult Same as adult Same as adult Same as adult Same as adult

Page 7: BOB LUEBKE CARDIOPULMONARY AND IMMUNOTOXICOLOGY BRANCH NHEERL, ORD, US EPA A Draft Immunotoxicity Vocabulary for ToxRefDB.

Next Steps and Caveats

Incorporate into ToxRefDBTest ability to capture immunotox data in

published studiesMinimal outside input on entriesIs the structure adaptable to other

vocabularies?