Biochem (Chapt.5)

127
Chapter 5. Metabolism of Lipids Lipids Insoluble or immiscible Triacylgerols store and supply energy for metabolism. Lipoids: phospholids, glycolipids, cholesterol and cholesterol ester membrane components

Transcript of Biochem (Chapt.5)

Page 1: Biochem (Chapt.5)

Chapter 5.Metabolism of Lipids

Lipids

Insoluble or immiscible

Triacylgerols

store and supply energy for metabolism. Lipoids: phospholids, glycolipids, cholesterol and

cholesterol ester

membrane components

Page 2: Biochem (Chapt.5)

Metabolism of lipid Fatty acids

esterified to some backbone molecules

glycerol sphingosine

cholesterol

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Metabolism of Lipids Fats

store in adipose tissue

Essential fatty acids: formation of membrane, regulation of chollesterol metabolism, precursors of eicosanoids (protaglandins, thromboxanes and leukotrienes.

Necessary unsaturated fatty acids

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Fat Facts Dietary lipids are 90% triacylglycerols; also include

cholesterol esters, phospholipids, essential unsaturated fatty acids; fat soluble vitamins (A,D,E,K)

Fat is energy rich and provides 9 kcal/gm

Normally essentially all (98%) of the fat consumed is absorbed, and most is transported to adipose for storage.

Page 5: Biochem (Chapt.5)

SIX STEPS OF LIPID DIGESTION AND ABSORPTION

Minor digestion of triacylglycerols in mouth and stomach by lingual (acid-stable) lipase

Major digestion of all lipids in the lumen of the duodenum/jejunum by pancreatic lipolytic enzymes

Bile acid facilitated formation of mixed micelles that present the lipolytic products to the mucosal surface, followed later by enterohepatic bile acid recycling

Assembly and export from intestinal cells to the lymphatics of chylomicrons coated with Apo B48 and containing triacylglycerols, cholesterol esters and phospholipids

Passive absorption of the lipolytic products from the mixed micelle into the intestinal epithelial cell

Reesterification of 2-monoacylglycerol, lysolecithin, and cholesterol with free fatty acids inside the intestinal enterocyte

Page 6: Biochem (Chapt.5)

Lipase Site of Action

Regulation Preferred Substrate

Ccleaved

Product(s)

lingual/acid-stable lipase

mouth, stomach

---- TAGs with med. chain FAs

3 FFA+DAG

pancreatic lipase

small intestine

colipase (+) TAGs with long-chain FAs

1 and 3 FFA+2MG

milk lipase small intestine

bile acids (+) TAGs with med. chain FAs

1 and 2 and 3

FFA+glycerol

phospholipase A2 (PLA2)

small intestine

bile acids (+) Ca2+ (+)

PLs with unsat. FA on position 2

2 Unsat FFA lysolecithin

lipoprotein lipase

capillary walls

apo CII (+)insulin (+)

TAGs in chylo-micron or VLDL

1 and 2 and 3

FFA+glycerol

Hormone-sens. Lipase

adipose cell insulin (-)glucagon (+)Epineph. (+)

TAG stored in adipose cells

3 FFA+DAG

Summary of the physiologically important lipases

Page 7: Biochem (Chapt.5)

Absorption of Lipids

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Metabolism of Triacylglyerols

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Mobilization of fats from triacylglycerols

Hormone sensitive lipase

Rate-determining step

Specific for removing first fatty acid

Phosphorylated form is active

LIPOLYSIS

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RECEPTORS

ATP

proteinkinase A

cellmembrane

EpinephrineGlucagon

HORMONES

cyclicAMP

ATP

ADP

= activation- = inhibition

TriacylglycerolFatty acid +

Diacylglycerol

OPHSL-a

HSL = hormone-sensitive lipase

proteinphosphatase

Pi

+ Insulin

- caffeinetheophylline

phosphodiesterase

AMP

+

Figure 1. Hormonal activation of triacylglycerol (hormone-sensitive) lipase. Phosphorylation brings about activation to HSL-a.

Adenylylcyclase

(inactive form)

HSL-bOH

inactive

active

+

Page 11: Biochem (Chapt.5)

lipolysis Glycerols and fatty acids

diffuse out of adipose cells and enter into circulation

Free fatty acids (FFA)

form fatty acid-albumin complexes Glycerols

to form dihydroxyacetone phosphate (DHAP)

Figure. Page 176

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Beta-Oxidation of Fatty Acids

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Beta Oxidation Part IThe break down of a fatty acid to acetyl-CoA

units…the ‘glycolysis’ of fatty acids

Occurs in the mitochondria

Exemplifies Aerobic Metabolism

at its most powerful phase

STRICTLY AEROBIC

Acetyl-CoA is fed directly into the Krebs cycle

Overproduction causes KETOSIS

Page 14: Biochem (Chapt.5)

CH3CH2CH2COOH

[CH3CH2CH2CO-AMP]

CH3CH2CH2CO~SCoA

HS-CoA

Fatty acyl CoA

ATP

PPi

AMPAcyl-CoA synthetase

Prepares a Fatty Acid for transport and metabolism

Page 15: Biochem (Chapt.5)
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CH2CH2CH2COO CH2CH2COO

OCH2CO COO

Diet

Urine

(even chain) (odd chain)

Phenylpyruvate Benzoate

Knoop’s Experiment

Phenylacetate Benzoate

Page 17: Biochem (Chapt.5)

Beta-Oxidation of Fatty Acids

Page 18: Biochem (Chapt.5)

C6H12O6 + 6O2 6CO2 + 6H2O Ho = -2,813 kJ/mol = - 672 Cal/mol = 3.74 Cal/gram

C18H36O2 + 26O2 18CO2 + 18 H2O Ho = -11,441 kJ/mol = - 2,737 Cal/mol = 9.64 Cal/gram

THE ENERGY STORY

Glucose

Stearic Acid

On a per mole basis a typical fatty acid is 4 times more energy rich that a typical hexose

Page 19: Biochem (Chapt.5)

Sample calculation of energy produced for the cell via -oxidation of palmitate (a C16 fatty acid):

                                                                                         

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Palmitoyl-CoA

Palmitoyl-CoA + 7CoA + 7FAD + 7NAD+ + 7H2O

8 Acetyl-CoA 80 ATP

7 FADH2 10.5 ATP

7 NADH + 7H+ 17.5 ATP

108 ATP-2 ATPTotal 106 ATP

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Beta Oxidation Part II

Unsaturated fatty acid

Polyunsaturated fatty acid

Odd number chain fatty acid

Obstacle of cis double bonds

Obstacle of position of double bond

Obstacle of 3 carbons at the end

3 Obstacles

Page 22: Biochem (Chapt.5)

CH3CH2CH2CH2CH2C CH2CH2CH2CH2CH2CH2CH2CO~SCoAC=C

HH4 3 2 1

Whoops!A cis D.B. will interfere

Oleic Acid

CH3CH2CH2CH2 CH2 CH2CH2CH2CH2CH2CH2CH2CO~SCoAC=C

HHC=C

HH12345

Linoleic

C18:cis9

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Unsaturated and Polyunsaturated Require Additional Enzymes

H H

CH3CH2CH2

C=CCH2CH2CH2-CO~SCoA

Cleavage here

New COO group

New carbon

8 7

CH3CH2CH2

CH2C C-CO~SCoA

H

H

8 7

Enoyl CoAIsomerase

9

9

Trans double bond

Page 24: Biochem (Chapt.5)

CH2-CH2

C=C

CH2

C=C

CH2-CH2-CH2-CH2-CH2-CH2CH2C~SCoA

O

H 9HHH

O

CH2C~SCoA

O

CH2C~SCoAO

CH2C~SCoA

1234

O

CH3C~SCoA12

O

CH3C~SCoA34

O

CH3C~SCoA56

Linoleic Acid C18 cis 9,12

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Poly Unsaturated (Continued)

9

-CH2 CH2 CH2CO~SCoAC=CH H

C=CH H

-CH2 CH2 C-CO~SCoAC-CH H

C=CH H

H

-CH2 CH2

CH2CO~SCoAC=CH H

Enoyl-CoAisomerase

Round 5starter

Round 4starter

Beta carbon to be

Page 26: Biochem (Chapt.5)

Round 5starter

FADH2

FAD

CO~SCoAC=CH H

CH2

Dead end

Acyl-CoAdehydrogenase

Acyl-CoAdehydrogenase

-CH2 CH2

CH2CO~SCoAC=CH H

New Strategy

C-CO~SCoAC

C=CH H

H

H

beta 6

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NADP+

NADPH + H+

2,4 dienoyl-CoAreductase

2,4 dienoyl-CoAreductase

3,2 enoyl-CoAisomerase

3,2 enoyl-CoAisomerase

CH2CO~SCoA H

CCCH2

H

Continue Beta Oxidation

Reduce near (bond), Shift far (bond)

C-CO~SCoAC

C=CH H

H

H

beta 6

beta 6

H

C-CO~SCoA C

CH2-CH2

H

beta 6

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Ketone bodies formation and utilization

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What is Ketosis?An excessive production of ketones in the blood

3 derivatives of acetyl-CoA

Acetoacetate

-hydroxybutyrate

Acetone

CH3CCH2COO-

O

O

CH3-C-CH3

CH3CCH2COO-

OH

H

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What is the Significance of ketosis

Acidosis

Excessive acid in the blood

Overflow

Excessive oxidation of fatty acids

Faulty Carbohydrate Metabolism

Metabolic Problem

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Metabolic fate of Acetyl CoA

Acetyl-CoA

Pyruvate

Citrate

Ketone BodiesFatty Acidsminor

major

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CH3C~SCoA

OCH3C~SCoA

O

-Ketothiolase

HS-CoA

CH3C

CH2C~SCoA

O

OH

+

CH3CCH2C~SCoA

O O

rearrangement

Acetoacetyl-CoA

Page 33: Biochem (Chapt.5)

CH3CCH2C~SCoA

O OCH3C~SCoA

O

CH3CCH2C~SCoA

CH2C-O-

O

OHO

HS-CoA

OOC-CH2-C-CH2-C~SCoA

O

OH

CH3

HMG-CoASynthase

-hydroxy--methylglutaryl-CoA

(HMG-CoA)

Page 34: Biochem (Chapt.5)

OOC-CH2-C-CH2-C~SCoA

O

OH

CH3

O

OOC-CH2-C-CH2-C~SCoA

OH

CH3

CH3-C~SCoA

O+

OOC-CH2-C-CH3

O

CH3-C-CH3

O

CO2

OOC-CH2-CH-CH3

OH

NADH + H+

NAD+

Acetoacetate

Acetone-hydroxybutyrate

HMG-CoA

HMG-CoALyase

Page 35: Biochem (Chapt.5)

Utilization of ketone bodies

1. Acetoacetate/succinyl-CoA CoA transferase

2. Acetoacetyl-CoA thiokinase

3. Acetoacetyl-CoA thiolase

Page 180

Page 36: Biochem (Chapt.5)

Pysiological Significance of ketogenesis

Ketone bodies produced by the liver are excellent fuels for a variety of extrahepatic tissues, especially during times of prolonged starvation.

Reconversion of ketone bodies to acetyl-CoA inside the mitochondria provides metabolic energy.

Page 37: Biochem (Chapt.5)

Regulation of Ketogenesis

Feeding status In the hungry state, higher glucagon and other

lipolytic hormones trigger the lipolytic process in adipose tissue with the result that free fatty acids pass into the plasma for uptake by liver and other tissues. This promotes fatty acid oxidation and ketogenesis in the liver.

Page 38: Biochem (Chapt.5)

Regulation of Ketogenesis Metabolism of glycogen in the hepatic cells

once fats enter the liver, they have two distinct fates: activated to acyl-Co-A and oxidized, or esterified to glycerol in the production of triacylglycerols in cytoplasm. If the liver has sufficient supplies of glycerol-3 phosphate by glucose metabolism, most of the fats will be turned to the production of triacylglycerols. In contrast, glucose deficiency will cause a lower triacylglycerols and ATP generation, with the majority of the FAs entering beta-oxidation leading to a increased production of ketone bodies.

Page 39: Biochem (Chapt.5)

Regulation of Ketogenesis The fall in malonyl-CoA concentration can terminate

the inhibition on carnitine acyltransferase I, such that long-chain fatty acids can be transported through the inner mitochondrial membrane to the enzymes of fatty acid oxidation and ketogenesis. This may happen during a hungry state. In contrast, administration of food after a fast, or of insulin to the diabetic subject, reduces plasma free fatty acid concentrations and increases liver concentration of malonyl-CoA, this will inhibit carnitine acyltransferase I and thus reverses the ketogenic process.

Page 40: Biochem (Chapt.5)

Fatty Acid Biosynthesis Not exactly the reverse of degradation

by a different set of enzymes , in a different part of the cell

Primarily in the cytoplasm of the following tissues: liver, kidney, adipose, central nervous system and lactating mammary gland

Liver is the major organ for fatty acid synthesis

Page 41: Biochem (Chapt.5)

LIPID BIOSYNTHESIS Fatty acid biosynthesis-basic fundamentals Fatty acid biosynthesis-elongation and

desaturation Triacylglycerols Phospholipids Cholesterol Cholesterol metabolism

Page 42: Biochem (Chapt.5)

Fatty Acid Biosynthesis

Cytosol Requires NADPH Acyl carrier protein D-isomer CO2 activation

Keto saturated

Mitochondria NADH, FADH2

CoA L-isomer No CO2

Saturated keto

Beta OxidationSynthesis

Page 43: Biochem (Chapt.5)

Rule:

Fatty acid biosynthesis is a stepwise assemblyof acetyl-CoA units (mostly as malonyl-CoA) ending with palmitate (C16 saturated)

Fatty acid biosynthesis is a stepwise assemblyof acetyl-CoA units (mostly as malonyl-CoA) ending with palmitate (C16 saturated)

Activation

Elongation

Termination

3 Phases

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CH3C~SCoA

O

ACTIVATION

-OOC-CH2C~SCoA

O

HCO3-

NN

O

SCH2CH2CH2CH2CO

HH

LYS

NHCH2CH2CH2CH2 ENZYME

NN

O

SCH2CH2CH2CH2CO

HC

O

O

Carboxybiocytin

Biotin

active carbon

Acetyl-CoA carboxylase

CO2

Biocytin

Cofactor

ATP

ADP + Pi

Page 45: Biochem (Chapt.5)

Acetyl-CoA CarboxylaseThe rate-controlling enzyme of FA synthesis

In Bacteria -3 proteins (1) Carrier protein with Biotin (2) Biotin carboxylase (3) Transcarboxylase

In Eukaryotes - 1 protein (1) Single protein, 2 identical polypeptide chains

(2) Each chain Mwt = 230,000 (230 kDa)(3) Dimer inactive (4)

Activated by citrate which forms filamentous form of protein that can be seen in the electron microscope

Page 46: Biochem (Chapt.5)

Yeast Fatty Acid Synthase Complex

2,500 kDa Multienzyme Complex

6 molecules of 2 peptide chains called A and B

(66)A: (185,000) Acyl Carrier protein -ketoacyl-ACP synthase (condensing enzyme) -ketoacyl-ACP reductase

B: (175,000) -hydroxy-ACP dehydrase enoyl-ACP reductase palmitoyl thioesterase

Fatty AcidSynthaseComplex

Page 47: Biochem (Chapt.5)

Acyl carrier protein10 kDa

Cysteamine

Phosphopantetheine

HS-CH2-CH2-N-C-CH2-CH2-N-C-C-C-CH2-O-P-O-P-O-CH2

O O O

OH H

H

HO CH3

H

O

OO Adenine

O-P-OO

OH

OHH

Coenzyme A

Acyl Carrier ProteinAcyl Carrier Protein

HS-CH2-CH2-N-C-CH2-CH2-N-C-C-C-CH2-O-P-O-CH2-Ser-O O O

OH H

H

HO CH3

H

ACP

Page 48: Biochem (Chapt.5)

Overall Reaction

CH3C~SCoA

O

CH3C-

O

CH2C~S-

O

ACP

HS-CoACO2

NOTE:

Malonyl-CoA carbons become new COOH end

Nascent chain remains tethered to ACP

Acyl CarrierProtein

CO2, HS-CoA are released at each condensation

Malonyl-CoA + ACP

-OOC-CH2C~S-

O

ACP + HS-CoA

Initiation

Page 49: Biochem (Chapt.5)

CH3C-

O

CH2C~S-

O

ACP

NADPH

CH3CH2CH2C~S-

O

ACP

CH3C- CH2C~S-

O

ACP

HO

H

CH3C- = C- C~S-

O

ACPH

H

-H2O

NADPH

-Carbon Elongation

D isomer

Reduction

Dehydration

Reduction

-Ketoacyl-ACP reductase

-Hydroxyacyl-ACP dehydrase

Enoyl-ACP reductase

Page 50: Biochem (Chapt.5)

-KS

CO2

-S-ACP

TERMINATION Ketoacyl ACPSynthase

Free to bindMalonyl-CoA

Transfer to KS

Split out CO2

Transfer to Malonyl-CoA

-CH2CH2CH2C~S-

O

ACP

When C16 stage is reached, instead of transferring to KS,the transfer is to H2O and the fatty acid is released

Page 51: Biochem (Chapt.5)

ACP

KS -SH

HSAcetyl-CoA

CoA-SH

-C-CH3

OS

KS S-C-CH3

OKS -SH

SH

CoA-SH

Malonyl-CoA

S -C-CH2-COO-

O

CO2C=O

CH2

C=O

CH3

S

O

CH3-CH -CH2-C-S

OH

OCH3-CH=CH-C-S

OCH3-CH2-CH2-C-S

S-C-CH2-CH2-CH3

O

KS

KS

NADP+

NADPH H+

NADPH H+

NADP+

H2O

Initiation or priming

Elongation

Fatty Acid SynthaseFatty Acid Synthase

-Ketoacyl-ACP reductase

-Ketoacyl-ACP reductase

-Hydroxyacyl-ACP dehydrase

-Hydroxyacyl-ACP dehydrase

Enoyl-ACP reductase

Enoyl-ACP reductase

-Keto-ACP synthase (condensing enzyme)

-Keto-ACP synthase (condensing enzyme)

Malonyl-CoA-ACP transacylase

Malonyl-CoA-ACP transacylase

Acetyl-CoA-ACP transacylase

Acetyl-CoA-ACP transacylase

-Ketoacyl-ACP synthase

-Ketoacyl-ACP synthase

Page 52: Biochem (Chapt.5)

Overall ReactionsAcetyl-CoA + 7 malonyl-CoA + 14NADPH + 14H+

Palmitate + 7CO2 + 14NADP+ + 8 HSCoA + 6H2O

7 Acetyl-CoA + 7CO2 + 7ATP 7 malonyl-CoA +7ADP + 7Pi + 7H+

8 Acetyl-CoA + 14NADPH + 7H+ + 7ATP Palmitate + 14NADP+ + 8 HSCoA + 6H2O + 7ADP + 7P

i

7H+

Page 53: Biochem (Chapt.5)

PROBLEM:

Fatty acid biosynthesis takes place in thecytosol. Acetyl-CoA is mainly in the

Mitochondria

How is acetyl-CoA made available to the cytosolicfatty acyl synthase?

SOLUTION:

Acetyl-CoA is delivered to cytosol from the mitochondria as CITRATE

acetyl-CoA

Page 54: Biochem (Chapt.5)

COO

COO

HO-C-COO

CH2

CH2

COO

COO

HO-C-COO

CH2

CH2

Citrate lyase

Acetyl-CoA

COO

COOCH2

C=O

COO

COOCH2

HO-C-H

NADH

OAA

L-malate

C=OCOO

CH3

NADP+

NADPH + H+

L-malate

mitochondria

CytosolPyruvate

Malic enzymeOAA

Acetyl-CoACO2

PyrCO2

Malatedehydrogenase

HS-CoA

Page 55: Biochem (Chapt.5)

Post-Synthesis Modifications

C16 satd fatty acid (Palmitate) is the product Elongation Unsaturation Incorporation into triacylglycerols Incorporation into acylglycerol phosphates

C16 satd fatty acid (Palmitate) is the product Elongation Unsaturation Incorporation into triacylglycerols Incorporation into acylglycerol phosphates

Page 56: Biochem (Chapt.5)

Elongation of Chain (two systems)

HS-CoA

R-CH2CH2CH2C~SCoAO

OOC-CH2C~SCoA

OCO2

Malonyl-CoA* (cytosol)

R-CH2CH2CH2CCH2C~SCoAO O

O R-CH2CH2CH2CH2CH2C~SCoA

NADPH NADH

1

- H2O2

NADPH3

Elongation systems arefound in smooth ER andmitochondria

CH3C~SCoA

OAcetyl-CoA(mitochondria)

Page 57: Biochem (Chapt.5)

DesaturationRules:The fatty acid desaturation system is in the smooth membranes of the endoplasmicreticulum

There are 4 fatty acyl desaturase enzymes in mammals designated 9 , 6, 5, and 4 fattyacyl-CoA desaturase

Mammals cannot incorporate a double bondbeyond 9; plants can.

Mammals can synthesize long chain unsaturated fatty acids using desaturation and elongation

Page 58: Biochem (Chapt.5)

Triacylglycerol Synthesis Fatty acyl-CoA DHAP reduction to glycerol-PO4

or

Glycerol kinase to glycerol-PO4

Two esterifications Diacylglycerol-PO4 intermediate

Triacylglycerol

O-C-RO

O-C-RO

R-C-OO

Page 59: Biochem (Chapt.5)

CH2O-C-R

R-C-O-C-HCH2OP

O

O

CH2OH

CH2OPC=O

CH2OH

HO-C-HCH2OH

CH2OH

HO-C-HCH2OP

ADP ATP

glycolysis

NADH + NAD+

Glycerol-PO4

glycerol kinase glycerol-PO4

dehydrogenase

Phospholipidbiosynthesis

CH2O-C-R

R-C-O-C-HCH2O-C-R

O

OO

H2O

PO4

CH2O-C-R

R-C-O-C-HCH2OH

O

O

1,2 Diacylglycerol (DAG)

Triacylglycerol Biosynthesis

Not in adiposetissueR-C~CoA

O

2

R-C~CoA

OPhosphatidic acid

DHAP

Page 60: Biochem (Chapt.5)

Question Can a triacylglycerol (triglyceride) storage

fat be synthesized entirely from glucose, i.e., every carbon in the fat comes from a sugar?

Answer: YES

Page 61: Biochem (Chapt.5)

Metabolism of Phospholipids Phospholipid

phosphorous-containing lipids

fatty acids, a phosphate group, and a simple organic molecule

Glycerolphospholipids (phosphoglycerides) glycerol Sphingolipid

sphingosine

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Classification of structural features of glycerolphospholipids

Table 8-2

Phospholipids

hydrophilic head , hydrophobic tail

Membrane

phospholipid bilayer

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Glycerolphospholipids

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Phosphatidic Acid

Polar componentEster linkage

- or + = choline, serine, ethanolamine, etc

O

CH2O-C-R

R-C-O-C-HCH2OPO-CH2CH2-N(CH3)3

O

O

O

Phosphatidylcholine or lecithin

PhospholipidBiosynthesis(smooth ER)

- or +O

CH2O-C-R

R-C-O-C-HCH2OP

O

O

O

OO

+

Glycerophospholipids

Page 65: Biochem (Chapt.5)

Strategy of Glycerophospholipid Biosynthesis Activate diacylglycerol Activate appending moiety (salvage)

N

N

NH2

O

RibosePPP-

CTP

Page 66: Biochem (Chapt.5)

CH2O-C-R

R-C-O-C-HCH2OP

O

O

Eukaryotes

CH2O-C-R

R-C-O-C-HCH2OH

O

O

Glycerol-3-PO4Glycerol

Phosphatidic acid

1,2 DAG

ATP

choline (CDP-choline)

Glycerol (CDP-diacylglycerol)Serine (phosphatidylethanolamine)

ethanolamine (CDP-ethanolamine)

Inositol (CDP-diacylglycerol)

Cardiolipin (phosphatidylglycerol)

DHAPFA-CoA

1-Acyl-DHAP

1-Acyl-glycerol-3-PO4

NADPH

DAG

1

2

3

ATP

Pi

CDP-diacylglycerolCTP

Page 67: Biochem (Chapt.5)

P

O

O

O

O

O

P

O

OO

OH

CH2

HO

N

N

O

NH2

CH2CH2(CH3)N3

+

Cytidine diphosphate (CDP) choline

P

O

O

O

O

O

P

O

OO

OH

CH2

HO

N

N

O

NH2

CH2CH2N3+

Cytidine diphosphate (CDP)

H

ethanolamine

Page 68: Biochem (Chapt.5)

Regulation of Triacylglecerol Metabolism

Pancreas

primary organ involved in sensing the organism’s dietary and energetic states.

monitoring glucose concentrations in the blood. Low blood glucose stimulates the secretion

of glucagon Elevated blood glucose calls for the

secretion of insulin

Page 69: Biochem (Chapt.5)

Acetaly-CoA carboxylase (ACC) Committed enzyme in fatty acid synthesis

activated by citrate

inhibited by palmitoyl-CoA, long-chain fatty acyl-CoAs

Affected by phosphorylation

glucagon or epinephrine

decreased activity of ACC by phosphorylation

insulin

increases the synthesis of triacylglycerols

Page 70: Biochem (Chapt.5)

Important Derivatives of Unsaturated Fatty Acids- Arachidonic Acid

Page 71: Biochem (Chapt.5)

EICOSANOID FACTS

20-carbon compounds

Include prostaglandins, prostacyclins, thromboxanes, leukotrienes

Physiological effects at very low concentrations

Many of their effects mediated by cyclic AMP or calcium second messengers

Unlike hormones, not transported in the blood

Local mediators that act where synthesized or in adjacent cells

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a. the inflammatory response involving primarily the joints (rheumatoid arthritis) and skin (psoriasis);

b. the production of pain and fever;

c. the regulation of blood pressure (vaso-constrictors/dilators) and blood clotting (platelet function);

d. decreased gastric acid secretion (prostacyclins may be an ideal way to control the symptoms of peptic ulcer, but prostanoid synthesis inhibitors, like aspirin, increase acid secretion causing peptic ulcer);

e. the control of several reproductive functions such as the induction of labor and delivery - this has led to the use of PGF2 as a mid-trimester abortifacient drug or as a labor-inducing agent;

f. the regulation of the sleep/wake cycle;

g. hypersensitivity allergic reactions (a primary action of leukotrienes).

The Actions of Prostaglandins and Leukotrienes

Page 73: Biochem (Chapt.5)

esterification

Membrane phospholipids

Dietary linoleic acid

Arachidonic acid

metabolism

Cell Activation Events: mechanical trauma, cytokines growth factors

Anti-inflammatory glucocorticoids

Prostaglandins and thromboxanes(Cyclic/ring product)

Phospholipase A2 (PLA2)

Leukotrienes(Linear product)

Arachidonic acid

Cyclooxygenase(COX)

Lipooxygenase(LOX)

Zyflo

Aspirin, Indomethacin, Ibuprofen NSAIDs

Figure 1. Liberation of arachidonic acid and its metabolism to prostaglandins/ thromboxanes or to leukotrienes

GC induce lipocortin that inhibits PLA2

Aspirin inhibits irreversiblyIndomethacin forms a salt bridge in the binding siteIbuprofen competes for substrate binding

Zyflo competes with AA for binding

Page 74: Biochem (Chapt.5)

LEUKOTRIENE FACTS

leukotriene synthesis inhibited by Zyflo, a lipooxygenase inhibitor

leukotriene action blocked by accolate, a receptor antagonist

peptidoleukotrienes: leukotrienes with short peptides addedcomponents of slow reacting substances of anaphylaxis (SRS-A)anaphylaxis violent (potentially fatal) allergic reaction10,000 times more potent than histamineSRS-A released from lung following immunological stressSRS-A contract smooth muscle causing constriction of bronchiimplicated in hypersensitivity reaction – such as insect sting

Page 75: Biochem (Chapt.5)

Arachidonic Acid (6)derived from membrane phospholipids

PGH2

central intermediate(Head of pathway)

Prostaglandinendoperoxidesynthase

Xaspirin

indomethacinibuprofen

GSSG

2GSH

PGG2

Cyclooxygenase

Hydroperoxidase

O2

Figure 3. Conversion of arachidonic acid to PGH2

Page 76: Biochem (Chapt.5)

O

COOH

C

O

CH3

Ser

CH2 OH

Figure 4. Structure and mechanism of action of aspirin

OH

COOH

C

O

CH3CH2 O

AcetylatedCyclooxygenase

(inactive)

Ser

C

O

CH3

C

O

CH3

C

O

CH3C

O

CH3 C

O

CH3

Cyclooxygenase(active)

Page 77: Biochem (Chapt.5)

COX-1 VS COX-2 DRUG ACTION

Aspirin:works on both isoformsCOX-1 effect reduces platelet aggregation (TXA2)COX-2 effect reduces inflammationSide effects due to COX-1 inhibition – stomach irritation

Specific COX-2 inhibitorsCelebrex/VioxxTarget inflammatory responseNo COX-1 inhibition to produce aspirin-induced side effects

Aspirin:works on both isoformsCOX-1 effect reduces platelet aggregation (TXA2)COX-2 effect reduces inflammationSide effects due to COX-1 inhibition – stomach irritation

Specific COX-2 inhibitorsCelebrex/VioxxTarget inflammatory responseNo COX-1 inhibition to produce aspirin-induced side effects

Page 78: Biochem (Chapt.5)

Metabolism of Cholesterols

Page 79: Biochem (Chapt.5)

Biosynthesis of Cholesterol Introduction

Functions of cholesterol. Important cell membrane component. Precursor for 3 biologically active compounds.

Bile. Steroid hormones. Vitamin D.

Disease implications. Cardiovascular disease.

Diet control and synthesis manipulation = < heart disorders.

Page 80: Biochem (Chapt.5)

Biosynthesis of Cholesterol Introduction

Disease implications. Gall stones. Steroidogenic enzyme deficiency.

Source of cholesterol. Meat. Eggs. Dairy products. De novo liver synthesis.

Page 81: Biochem (Chapt.5)
Page 82: Biochem (Chapt.5)
Page 83: Biochem (Chapt.5)
Page 84: Biochem (Chapt.5)
Page 85: Biochem (Chapt.5)

Cholesterol Synthesis

Page 86: Biochem (Chapt.5)

Hydroxymethylglutaryl-coenzyme A (HMG-CoA) is the precursor for cholesterol synthesis.

HMG-CoA is also an intermediate on the pathway for synthesis of ketone bodies from acetyl-CoA.

The enzymes for ketone body production are located in the mitochondrial matrix.

HMG-CoA destined for cholesterol synthesis is made by equivalent, but different, enzymes in the cytosol.

CH2 C CH2 C

OH O

SCoA

CH3

C

O

O

hydroxymethylglutaryl-CoA

Page 87: Biochem (Chapt.5)

HMG-CoA is formed by condensation of acetyl-CoA & acetoacetyl-CoA, catalyzed by HMG-CoA Synthase.

HMG-CoA Reductase catalyzes production of mevalonate from HMG-CoA.

H3C C CH2 C

O O

SCoA

H3C C

O

SCoA

HSCoA

CH2 C CH2 C

OH O

SCoA

CH3

C

O

O

H2O acetoacetyl-CoA

hydroxymethylglutaryl-CoA

acetyl-CoA HMG-CoA Synthase

Page 88: Biochem (Chapt.5)

The carboxyl of HMG that is in ester linkage to the CoA thiol is reduced to an aldehyde, and then to an alcohol.

NADPH serves as reductant in the 2-step reaction.

Mevaldehyde is thought to be an active site intermediate, following the first reduction and release of CoA.

+ HSCoA

H2CC

CH3HO

CH2

CO O

C SCoA

O

H2CC

CH3HO

CH2

CO O

H2C OH

2NADP+

2NADPH

HMG-CoA

mevalonate

HMG-CoAReductase

Page 89: Biochem (Chapt.5)

HMG-CoA Reductase is an integral protein of endoplasmic reticulum membranes.

The catalytic domain of this enzyme remains active following cleavage from the transmembrane portion of the enzyme.

The HMG-CoA Reductase reaction, in which mevalonate is formed from HMG-CoA, is rate-limiting for cholesterol synthesis.

This enzyme is highly regulated and the target of pharmaceutical intervention.

Page 90: Biochem (Chapt.5)

Mevalonate is phosphorylated by 2 sequential Pi transfers from

ATP, yielding the pyrophosphate derivative.

ATP-dependent decarboxylation, with dehydration, yields isopentenyl pyrophosphate.

H2CC

CH3HO

CH2

C O O

CH2 OH

H2C

C

CH2 CH2 O P O P O

O

O

O

O

CH3

H2CC

CH3HO

CH2

C O O

CH2 O P O P O

O

O

O

O

CO2

ATP

ADP + Pi

2 ATP

2 ADP

mevalonate

5-pyrophosphomevalonate

(2 steps)

isopentenyl pyrophosphate

Page 91: Biochem (Chapt.5)

Isopentenyl pyrophosphate is the first of several compounds in the pathway that are referred to as isoprenoids, by reference to the compound isoprene.

isoprene

H2CC

CCH2

CH3

H

is o p e n te n y l p y ro p h o s p h a te

H 2 CC

CH 2

H 2C

C H 3

O P

O

O

O P O

O

O

Page 92: Biochem (Chapt.5)

Isopentenyl Pyrophosphate Isomerase inter-converts isopentenyl pyrophosphate & dimethylallyl pyrophosphate.

Mechanism: protonation followed by deprotonation.

H2C

C

CH2 CH2 O P O P O

O

O

O

O

CH3

H3C

C

CH CH2 O P O P O

O

O

O

O

CH3

isopentenyl pyrophosphate

dimethylallyl pyrophosphate

Page 93: Biochem (Chapt.5)

Prenyl Transferase catalyzes head-to-tail condensations:

Dimethylallyl pyrophosphate & isopentenyl pyrophosphate react to form geranyl pyrophosphate.

Condensation with another isopentenyl pyrophosphate yields farnesyl pyrophosphate.

Each condensation reaction is thought to involve a reactive carbocation formed as PPi is eliminated.

Condensation Reactions

Page 94: Biochem (Chapt.5)

CH2 CH2 O P O P O

O

O

O

O

CH CH2 O P O P O

O

O

O

O

CH2C

CH3

CH3C

CH3

CH CH2CH3C

CH3

CH CH2 O P O P O

O

O

O

O

CCH2

CH3

PPi

CH2 CH2 O P O P O

O

O

O

O

CH2C

CH3

CH CH2CH3C

CH3

CH CH2CCH2

CH3

PPi

CH CH2 O P O P O

O

O

O

O

CCH2

CH3

dimethylallyl pyrophosphate

isopentenyl pyrophosphate

isopentenyl pyrophosphate

geranyl pyrophosphate

farnesyl pyrophosphate

Each condensation involves a carbocation formed as PPi is eliminated.

Page 95: Biochem (Chapt.5)

Squalene Synthase: Head-to-head condensation of 2 farnesyl pyrophosphate, with reduction by NADPH, yields squalene.

CH CH2CH3C

CH3

CH CH2CCH2

CH3

CH CH2 O P O P O

O

O

O

O

CCH2

CH3

2

O

NADP+

O2 H2O

HO

H+

NADPH

NADP+ + 2 PP i

NADPH

2 farnesyl pyrophosphate

squalene 2,3-oxidosqualene lanosterol

Page 96: Biochem (Chapt.5)

Squaline epoxidase catalyzes conversion of squalene to 2,3-oxidosqualene.

This mixed function oxidation requires NADPH as reductant & O2 as oxidant. One O atom is incorporated into substrate (as the epoxide) & the other O is reduced to water.

O

NADP+

O2 H2O

HO

H+NADPH

squalene 2,3-oxidosqualene lanosterol

Page 97: Biochem (Chapt.5)

Structural studies of a related bacterial enzyme have confirmed that the substrate binds at the active site in a conformation that permits cyclization with only modest changes in position as the reaction proceeds.

The product is the sterol lanosterol.

O HO

H+

2,3-oxidosqualene lanosterol

Squalene Oxidocyclase catalyzes a series of electron shifts, initiated by protonation of the epoxide, resulting in cyclization.

Page 98: Biochem (Chapt.5)

Conversion of lanosterol to cholesterol involves 19 reactions, catalyzed by enzymes in ER membranes.

Additional modifications yield the various steroid hormones or vitamin D.

Many of the reactions involved in converting lanosterol to cholesterol and other steroids are catalyzed by members of the cytochrome P450 enzyme superfamily.

H O H O

lan o ste ro l ch o les te ro l

1 9 s tep s

Page 99: Biochem (Chapt.5)

Regulation of cholesterol synthesis

HMG-CoA Reductase, the rate-limiting step on the pathway for synthesis of cholesterol, is a major control point.

Short-term regulation:

HMG-CoA Reductase is inhibited by phosphorylation, catalyzed by AMP-Dependent Protein Kinase (which also regulates fatty acid synthesis and catabolism).

This kinase is active when cellular AMP is high, corresponding to when ATP is low.

Thus, when cellular ATP is low, energy is not expended in synthesizing cholesterol.

Page 100: Biochem (Chapt.5)

Long-term regulation is by varied formation and degradation of HMG-CoA Reductase and other enzymes of the pathway for synthesis of cholesterol.

Regulated proteolysis of HMG-CoA Reductase:

• Degradation of HMG-CoA Reductase is stimulated by cholesterol, oxidized derivatives of cholesterol, mevalonate, & farnesol (dephosphorylated farnesyl pyrophosphate).

• HMG-CoA Reductase includes a transmembrane sterol-sensing domain that has a role in activating degradation of the enzyme via the proteasome (proteasome to be discussed later).

Page 101: Biochem (Chapt.5)

Long-term regulation is by varied formation and degradation of HMG-CoA Reductase and other enzymes of the pathway for synthesis of cholesterol.

Regulated proteolysis of HMG-CoA Reductase:

• Degradation of HMG-CoA Reductase is stimulated by cholesterol, oxidized derivatives of cholesterol, mevalonate, & farnesol (dephosphorylated farnesyl pyrophosphate).

• HMG-CoA Reductase includes a transmembrane sterol-sensing domain that has a role in activating degradation of the enzyme via the proteasome (proteasome to be discussed later).

Page 102: Biochem (Chapt.5)
Page 103: Biochem (Chapt.5)
Page 104: Biochem (Chapt.5)

Lipid transport

• triacylglycerides, cholesterol, phospholipids

• dietary lipid transport –chylomicron

• endogenous lipid transport (VLDL, IDL, LDL, HDL)

Page 105: Biochem (Chapt.5)
Page 106: Biochem (Chapt.5)
Page 107: Biochem (Chapt.5)

pancreaticlipases

intestinal lumentriacylglycerols FFA + monoacylglycedrols

bile acidscholesterol

micellesmicellesepithelial cellstriacylglycerols

absorbed by intestinal epithelial cells and reconverted to triacylglycerols

•Packaged into chylomicron•Released into lymphatic system and then via capillaries to blood stream

chylomicron

•acted upon by lipases on cell walls of capillaries in tissues

FFA • taken up by tissues

energy production

reconversion to TAGs in adipocytes for storage

hormone sensitive lipasesFFAreleased to circulatory system and combine with albumin fordelivery to tissues

Dietary uptake and distribution of fatty acids

Page 108: Biochem (Chapt.5)

Why do we need lipoproteins? Triacylglycerides (TAGs) + cholesterol (Chol)

are nonpolar molecules → insoluble in H2O

TAG + Chol must be packaged within a polar shell in order to be transported through the blood to the various tissues

This is accomplished by combining nonpolar lipids w/ amphipathic lipids →(a polar water-soluble terminal group attached to an H2O -insoluble hydrocarbon chain)

Page 109: Biochem (Chapt.5)

Lipoproteins & Apolipoproteins

Lipoproteins (LP) function: transport of cholesterol + esterified lipids in

blood structure:

1) polar shell ---single phospholipid (PL) layer: head groups directed outward

-Chol -apolipoproteins2) nonpolar lipid core

-hydrophobic TAG(triacylglycerol)-cholesteryl ester (CE)

Page 110: Biochem (Chapt.5)

apolipoproteins• Provide structural stability to Lp

• Act as cofactors for enzymes involved in plasma lipid and Lp metabolism

• Serve as ligands for interaction w/Lp receptors that help determine disposition of individual particles

Page 111: Biochem (Chapt.5)

There are many types of apolipoproteinsaApoprotein Lipoproteins Function(s)

Apo B-100 VLDL, IDL, LDL 1) Secretion of VLDL from liver 2) Structural protein of VLDL, IDL, and HDL 3) Ligand for LDL receptor (LDLR)

Apo B-48 Chylomicrons, remnants

Secretion of chylomicrons from intestine; lacks LDLR binding domain of Apo B-100

Apo E Chylomicrons, VLDL, IDL, HDL

Ligand for binding of IDL & remnants to LDLR and LRP

Apo A-I HDL, chylomicrons 1) Major structural protein of HDL2) Activator of LCAT

Apo A-II HDL, chylomicrons Unknown

Apo C-I Chylomicrons, VLDL, IDL, HDL

Modulator of hepatic uptake of VLDL and IDL (also involved in activation of LCAT)

Apo C-II Chylomicrons, VLDL, IDL, HDL

Activator of LPL

Apo C-III Chylomicrons, VLDL, IDL, HDL

Inhibitor of LPL activity

Page 112: Biochem (Chapt.5)

Lipoprotein Structure

Page 113: Biochem (Chapt.5)
Page 114: Biochem (Chapt.5)

Lipoproteins• hydrophobic core (TAGS, cholesterol esters)• hydrophilic surface (P-lipids, cholesterol, and

apolipoproteins)

• Functiontransport of lipids in blood

• Types of lipoproteins(classified according to density)

• very low density (VLDL)• intermediate density (IDL)• low density (LDL)• high density (HDL)Protein content increase, lipid decreases as density increases.

% TAGS

% Protein

Chylomicron VLDL IDL LDL HDL85%

2%

8%

33%

Page 115: Biochem (Chapt.5)

nm

Page 116: Biochem (Chapt.5)
Page 117: Biochem (Chapt.5)

Lipoproteins

• Chylomicron:

• 85% TAG, 4% chol., 8% protein•formed in intestinal epithelial cells• deliver exogenous TAGS to tissue• 80 -500nm• ApoCII activates lipases in capillary cell walls releasing FFA to tissue

• chylomicron remnants return to liver where they bind to ApoE receptor and are taken up

• 1/2 life in blood - 4-5 minutes

Page 118: Biochem (Chapt.5)

• VLDL:

• 50% TAGs, 22% choles., 10% protein• 30 -100 nm • formed in liver• deliver endogenous lipids to other tissues(mainly muscle and fat cells)

• ApoCII activates lipases in capillary cell walls releasing FFA to tissue

• converted to IDLs and LDL as lipids are released

Page 119: Biochem (Chapt.5)

• IDL: (31% TAGs, 29% choles., 18% protein) • formed from VLDLs as lipids removed• some IDLs return to liver• rest converted to LDLs by further removal of lipids

Lipoproteins

Page 120: Biochem (Chapt.5)

• LDL: “bad” cholesterol• •10% TAGs, 45% choles., 25% protein• 25 - 30 nm• formed as lipids removed from VLDLs

and IDLs. • all apolipoproteins lost except ApoB100• bind to LDL receptor via ApoB100 and

taken up by endocytosis by hepatic and other tissues (50-75% taken up by liver).

• Primary mode of cholesterol delivery to tissues.• Synthesis of LDL receptor is inhibited by

high levels of intracellular cholesterol and stimulated by low levels of cholesterol.Therefore, cholesterol uptake is closely matched to intracellular cholesterol levels.

Page 121: Biochem (Chapt.5)

• HDL: “good” cholesterol

• 8% TAGs, 30% choles., 33% protein• 7.5 - 10 nm• formed in liver• scavenge cholesterol from cell surfaces

and other lipoproteins and deliver it to liver.• Convert cholesterol to cholesterol ester• bind to “scavenger receptor” on liver cell

surface - cholesterol esters taken up and HDLs released and reenter circulation.

Lipoproteins

Page 122: Biochem (Chapt.5)

Intestine Liver

Dietary lipids

chylomicron

Peripheral tissues

Dietary lipids

chylomicron

LDLs

TriacylglycerolsFFA

monoacylglycerols

Cholesterol

Cholesterol esters

Triacylglycerolscholesterol

Cholesterol esters

VLDLs

HDL

HDLs

Page 123: Biochem (Chapt.5)

Intestine Liver

Dietary lipids

chylomicron

Peripheral tissues

Dietary lipids

chylomicron

TriacylglycerolsFFA

monoacylglycerols

Cholesterol

Cholesterol esters

Distribution of endogenous lipids The Exogenous Pathway

LPLs activated by ApoCII

Chylomicronremnantsacquire

ApoE, CIIand others

ApoE/LDLRmediated

uptake

Page 124: Biochem (Chapt.5)

Liver

Peripheral tissues

LDLs

TriacylglycerolsFFA

monoacylglycerols

Cholesterol Ester

Cholesterol

Triacylglycerolscholesterol

Cholesterol esters

VLDLs

IDLs

Distribution of endogenous lipids The Endogenous Pathway

acquireApoE, CIIand others

LPLs activated by ApoCII

LDLR/ApoE

LDLR/ApoB100

Page 125: Biochem (Chapt.5)

Distribution of endogenous lipids The HDL Pathways

Transport of excess cholesterol from peripheral tissues back to liver for excretion in bile

HDLs act as acceptors for excess chol, Apo, PL derived fromCM, VLDL and LDL

HDLs synthesized by both liver and intestine

Page 126: Biochem (Chapt.5)

Liver

Peripheral tissues

LDLs

TriacylglycerolsFFA

monoacylglycerols

Cholesterol Ester

Cholesterol

Triacylglycerolscholesterol

Cholesterol esters

VLDLs

HDL

HDLs

IDLsCEs

TAGs

Distribution of endogenous lipids The HDL Pathways

scavenger receptoruptake of cholesterol

VLDLCholes.

Page 127: Biochem (Chapt.5)

Abnormal Metabolism of Lipoprotein

Hyperlipoproteinemia Genetic diseases