ASM Poster cd jk ma

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Distribution and Biodiversity of Tardigrades (Water bears) in the Grand Canyon National Park Jesse Kerr, Michaela Alvers, Samuel Brown, Burnett Grant, Stephanie Lewis, Dave Ginocchio and Dr. Clarissa Dirks, The Evergreen State College The phylum Tardigrada consists of upwards of 900 species of microscopic organisms famously known as the only animals able to survive the vacuum and radiation of space , . Tardigrades can be found in marine, freshwater, and semiterrestrial environments living on moss and lichen. Our project aims to better understand how these organisms are dispersed and the role of abiotic factors in this process. We investigated the distribution and biodiversity of tardigrades in the Grand Canyon National Park (GCNP) in relation to a variety of abiotic factors including elevation, geologic strata, and moisture content of an environment. Of the few tardigrade diversity studies conducted in Arizona, our study was the first research endeavor examining tardigrades in the GNCP. 0% 10% 20% 30% 40% 50% 60% 70% 1900-2900 2900-3900 3900-4900 4900-5900 5900-6900 6900-8000 Elevation (ft) % Samples with Live Tardigrades by Elevation 0% 5% 10% 15% 20% 25% 30% 35% 40% 45% % DRY Samples Positive % Wet Samples Positive Perc en t age of Samp l es wi t h L i v e Tardi gra des Figure 2: Left: The Grand Canyon from Grandview Point. The Terrain is ch ŽĨ ƚŚĞ ĚƌLJ ƐĂŵƉůĞƐ ZŝŐŚƚ ,ĂǀĂƐƵ &ĂůůƐ ^ĂŵƉůĞƐ ĨƌŽŵ ƐĞĞƉƐ ĂŶĚ ƐƉƌŝŶŐ more likely to have no tardigrades. Introduction Bryophyte samples were collected from seven different trails along both the north rim and south rim of the GCNP spanning a range of elevation from 1900 ft. to 8000 ft. Samples were characterized as either ĚƌLJ (desert) or ǁĞƚ , high moisture samples from seeps and springs. From each sample site, GPS location, geologic strata, and a description of the microhabitat was recorded. In the laboratory, samples were uniformly prepared, measured, weighed, and dried to determine moisture content and moss volume. Tardigrades were isolated by conventional moss sieving. Abundance data from other meiofauna including nematodes, rotifers, microcilliaphora, and moss ticks were recorded simultaneously. Methods Results Live tardigrades were found in a much higher proportion of the ĚƌLJ (desert) samples (n=70) than the ǁĞƚ highʹmoisture samples (n=28) (those collected from seeps and springs. (Fig 2) Live tardigrades were also found to be unevenly distributed by elevation. (Fig 3) The lowest elevations sampled (between 1900 3900 feet), and the highest elevations sampled (between 6900 8000 feet) were least likely to contain live tardigrades. Samples were more likely to contain tardigrades between 3900 ʹ 6900 feet. The elevation band that contained the highest percentage of samples with live tardigrades was between 39004900 feet. Determine tardigrade species using morphological and molecular methods. Phase contrast and differential interference contrast (DIC) microscopy using the Zeiss Universal Compound Microscope. PCR amplification of cytochrome oxidase subunit 1 (CO1) for DNA barcoding Analyze distribution of species in relation to abiotic factors. Characterize possible undiscovered species by light and SEM microscopy. Conclusions Tardigrade Distribution by Moisture Content Tardigrade Distribution by Elevation Tardigrade Distribution by Geologic Strata Acknowledgements Tardigrades were more likely to be found in naturally low moisture samples in the GNCP. Elevations between 39006900 feet in the GNCP were more likely to contain tardigrades. Geological layers composed of limestone and sandstone were more likely to contain live tardigrades than those composed of shale. Future Directions This project was funded by grants from the Betty Kutter Fund, the Foundation Activity Grant, (of The Evergreen State College Foundation) , and the Student Undergraduate Research Fund. Support was provided by the Scientific Instructional technicians of TESC, (Ladd Rutherford, Trisha Towanda, Alberto Napuli, Dan Cygnar, and others. Special thanks to John McClain Figure 4 : Buccalpharyngeal apparatus of Macrobiotus sp. Imagedat 400X with Light Microscopy (LM) Figure 5: Preliminary results of a 658 bp PCR amplified CO1 from five tardigrades , negative control, postWZ ĐůĞĂŶƵƉ product, and 1kb DNA ladder The percentage of samples with live tardigrades was influenced by the geological strata, or layer, the sample was collected from (Fig. 4). Strata composed primarily of shale (Hakatai and Bright Angel) were less likely to contain live tardigrades than those composed of limestone or sandstone (Muav, Redwall, Coconino, and Kaibab). The Supai Group (composed of both limestone and sandstone) and Redwall Limestone were most likely to contain live tardigrades. Not examined Not examined Kaibab Formation Toroweap Formation Coconino Sandstone Supai Group Redwall Limestone Muav Limestone Tapeats Sandstone Bright Angel Shale Hakatai Shale 0% 10% 20% 30% 40% 50% 60% 70% Kaibab Toroweap Coconino Supai Redwall Muav Bright Angel Tapeats Hakatai Figure 1: The /ĐĞ ŽůƵŵŶ method. A ƉƵŶĐŚ of moss of standardized width is suspended in the bottom of a conical tube and an ice cube is melted over it. The resulting ŝĐĞ ƌƵŶŽĨĨ is then examined for tardigrades and other meiofauna. This process is repeated twice. Figure 3: Tardigrade Distribution by Elevation Figure 4: Tardigrade Distribution by Geological Layer: Geological layers were composed of shale, limestone, sandstone, or igneous/ metamorphic rock (some data not shown).

Transcript of ASM Poster cd jk ma

Page 1: ASM Poster cd jk ma

Distribution  and  Biodiversity  of  Tardigrades  (Water  bears)  in    the  Grand  Canyon  National  Park  

Jesse  Kerr,  Michaela    Alvers,  Samuel  Brown,  Burnett  Grant,  Stephanie  Lewis,  Dave  Ginocchio  and  Dr.  Clarissa  Dirks,  The  Evergreen  State  College  

The   phylum   Tardigrada   consists   of   upwards   of   900  species   of  microscopic   organisms   famously   known  as  the   only   animals   able   to   survive   the   vacuum   and  radiation   of   space,.   Tardigrades   can   be   found   in  marine,  freshwater,  and  semi-­‐terrestrial  environments  living  on  moss  and   lichen.  Our  project  aims   to  better  understand   how   these   organisms   are   dispersed   and  the   role   of   abiotic   factors   in   this   process.   We  investigated   the   distribution   and   biodiversity   of  tardigrades  in  the  Grand  Canyon  National  Park  (GCNP)  in   relation   to   a   variety   of   abiotic   factors   including  elevation,  geologic  strata,  and  moisture  content  of  an  environment.   Of   the   few   tardigrade   diversity   studies  conducted  in  Arizona,  our  study  was  the  first  research  endeavor  examining  tardigrades  in  the  GNCP.          

0% 10% 20% 30% 40% 50% 60% 70%

1900-2900

2900-3900

3900-4900

4900-5900

5900-6900

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%  Samples  with  Live  Tardigrades  by  Elevation  

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%  DRY  Samples  Positive %  Wet  Samples  Positive

Percentage of Samples with Live Tardigrades

Figure  2:  Left:  The  Grand  Canyon  from  Grandview  Point.  The  Terrain  is  characteristic      

more  likely  to  have  no  tardigrades.  

Introduction    

Bryophyte  samples  were  collected  from  seven  different  trails   along   both   the   north   rim   and   south   rim   of   the  GCNP   spanning   a   range   of   elevation   from   1900   ft.   to  8000   ft.   Samples   were   characterized   as   either    (desert)  or     ,   high  moisture   samples   from  seeps  and   springs.   From   each   sample   site,   GPS   location,  geologic   strata,   and   a   description   of   the  microhabitat  was   recorded.   In   the   laboratory,   samples   were  uniformly  prepared,  measured,  weighed,   and  dried   to  determine   moisture   content   and   moss   volume.  Tardigrades   were   isolated   by   conventional   moss  sieving.   Abundance   data   from   other   meiofauna  including   nematodes,   rotifers,   microcilliaphora,   and  moss  ticks  were  recorded  simultaneously.  

Methods  

Results  

Live   tardigrades   were   found   in   a  much   higher   proportion   of   the  

  (desert)   samples   (n=70)  than   the     high moisture  samples   (n=28)   (those   collected  from  seeps  and  springs.  (Fig  2)  

Live   tardigrades   were   also   found   to   be  unevenly  distributed  by  elevation.   (Fig  3)   The  lowest   elevations   sampled   (between   1900-­‐3900   feet),   and   the   highest   elevations  sampled   (between   6900   -­‐   8000   feet)   were  least  likely  to  contain  live  tardigrades.  Samples  were   more   likely   to   contain   tardigrades  between  3900    6900  feet.  The  elevation  band  that   contained   the   highest   percentage   of  samples   with   live     tardigrades   was   between  3900-­‐4900  feet.    

Determine   tardigrade   species   using   morphological  and  molecular  methods.  

Phase   contrast   and   differential   interference  contrast   (DIC)   microscopy   using   the   Zeiss  Universal  Compound  Microscope.  PCR   amplification   of   cytochrome   oxidase  subunit  1  (CO1)  for  DNA  barcoding  

Analyze  distribution  of   species   in   relation   to  abiotic  factors.  Characterize    possible  undiscovered  species  by   light  and  SEM  microscopy.  

Conclusions  Tardigrade  Distribution  by  Moisture  Content  

Tardigrade  Distribution  by  Elevation  

Tardigrade  Distribution  by  Geologic  Strata  

Acknowledgements  

Tardigrades  were  more  likely  to  be  found  in  naturally  low  moisture  samples  in  the  GNCP.  Elevations   between   3900-­‐6900   feet   in   the   GNCP  were  more  likely  to  contain  tardigrades.  Geological   layers   composed   of   limestone   and  sandstone   were   more   likely   to   contain   live  tardigrades  than  those  composed  of  shale.    

Future    Directions  

This  project  was  funded  by  grants  from  the  Betty  Kutter  Fund,  the  Foundation  Activity  Grant,  (of  The  Evergreen  State  College  Foundation)  ,  and  the  Student  Undergraduate  Research  Fund.  Support  was  provided  by  the  Scientific  Instructional  technicians  of  TESC,    (Ladd  Rutherford,  Trisha  Towanda,  Alberto  Napuli,  Dan  Cygnar,  and  others.  Special  thanks  to  John  McClain  

Figure  4  :  Buccal-­‐pharyngeal  apparatus  of  Macrobiotus  sp.  Imagedat  400X  with  Light  Microscopy  (LM)    

Figure  5:  Preliminary  results  of  a  658  bp    PCR    amplified  CO1    from    five  tardigrades  ,  negative  control,  post-­‐ -­‐product,  and  1kb  DNA  ladder  

The  percentage  of  samples  with  live  tardigrades  was  influenced  by  the  geological  strata,  or   layer,   the   sample   was   collected   from   (Fig.   4).   Strata   composed   primarily   of   shale  (Hakatai   and   Bright   Angel)   were   less   likely   to   contain   live   tardigrades   than   those  composed  of  limestone  or  sandstone  (Muav,  Redwall,  Coconino,  and  Kaibab).  The  Supai  Group  (composed  of  both  limestone  and  sandstone)  and  Redwall  Limestone  were  most  likely  to  contain  live  tardigrades.  

Not  examined  

Not  examined  

Kaibab  Formation  Toroweap  Formation  Coconino  Sandstone  

Supai  Group  

Redwall  Limestone  

Muav  Limestone  

Tapeats  Sandstone  Bright  Angel  Shale  

Hakatai  Shale    

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Kaibab

Toroweap

Coconino

Supai

Redwall

Muav

Bright  Angel

Tapeats

Hakatai

Figure   1:   The       method.   A     of   moss   of  

standardized   width   is  suspended   in   the  bottom  of     a   conical   tube  and  an  ice  cube  is  melted  over  it.  The  resulting      is   then   examined   for  tardigrades   and   other  meiofauna.   This   process  is  repeated  twice.    

Figure  3:  Tardigrade  Distribution  by  Elevation    

Figure  4:  Tardigrade  Distribution  by  Geological  Layer:  Geological  layers  were  composed  of  shale,  limestone,  sandstone,  or              igneous/  metamorphic  rock  (some  data  not  shown).