Anmar Khadra...Khadra ral Fellow ological Modeling itutes of Healthitutes of Health ay 23, 2011. 1....

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Mathematical M Receptor Receptor Gat Anmar Postdocto Laboratory of Bi National Insti National Insti Monday, M odeling of P2X7 r/Channel r/Channel ting r Khadra oral Fellow iological Modeling itutes of Health itutes of Health May 23, 2011

Transcript of Anmar Khadra...Khadra ral Fellow ological Modeling itutes of Healthitutes of Health ay 23, 2011. 1....

  • Mathematical MReceptorReceptor

    Gat

    Anmar

    PostdoctoLaboratory of Bi

    National InstiNational Insti

    Monday, M

    Modeling of P2X7 r/Channelr/Channelting

    r Khadra

    oral Fellowiological Modeling itutes of Healthitutes of Health

    May 23, 2011

  • 1. An Overview

    P2X7Rs are ATP-gated nonseon various cellson various cells.

    Activation of these receptors cagrowth and differentiation.growth and differentiation.

    lective cation channels expressed

    an either cause cell death or cell

  • 1. An Overview

    There are 3 ATP-bindinggNegative cooperativity inReceptor sensitization (ATP b dATPs are bound.

    g sites on P2X7Rs.gn ATP binding is observed.pore dilation) occurs when 3

  • 1. Gating Propertie

    P2X7Rs activate/deactivate eithalmost constant amplitude, or bcurrent amplitude and slowed de

    es of P2X7R

    her monophasically (I1), with iphasically (I1+ I2), with increased 1 2eactivation.

  • 1. Gating Propertie

    I1 rise was best fitted with a monoexponential pfunction. The rate of I1 growth increased with elevation in agonistelevation in agonist.

    4-parameter logistic function was the best fitfunction was the best fit for I2 growth.

    B i i fBest approximation for current deactivation was achieved using gmonoexponential or biexponential fittings.

    es of P2X7R

  • 1. Gating Propertie

    Repetitive agonistRepetitive agonist stimulation led to receptor sensitization

    d dil tiand pore dilation.

    During repetitive stimulation, current amplitude increased pand the deactivation component slowed downdown.

    es of P2X7R

  • 2. Ca2+-Dependenc

    Free-intracellular Ca2+ allosteric

    ce

    cally inhibited receptor activation.

  • 2. Ca2+-Dependenc

    Free-intracellular Ca2+ also facilated receptor pdeactivation.

    ce

  • 3. Modeling of P2X

    Markov state model describingunbinding and sensitization/losP2X7Rs in a cell was used.

    X7R Gating

    g the sequence of binding and ss-of-sensitization events of

  • 3. Modeling of P2X

    F β2/(β2F=αβ2/(β2

    X7R Gating

    2 [DC] 2)2+[DC]e2)

  • 3. Modeling of P2X

    Monophasic and biphasic rMonophasic and biphasic r

    X7R Gating

    responses were generated.responses were generated.

  • 3. Modeling of P2X

    Receptor sensitization was also obtained during repetitive stimulation.

    X7R Gating

  • 4. Understanding

    Ca2+ inhibits BzATP bCa2 inhibits BzATP-b

    Ca2+ effects

    binding to the receptorbinding to the receptor.

  • 4. Understanding

    Ca2+ facilitates receptor deactivation due to increased backward rates.

    Ca2+ effects

  • 5. Conclusions The two current phases may bcontradictory outcomes (apopt

    Receptor sensitization (dilation)phase of the current. Supportedphase of the current. Supported

    Negative cooperativity in ATP biti tisensitization.

    Ca2+ acts as an allosteric inhibitCa acts as an allosteric inhibitforward rates and increasing th

    e responsible for the seemingly osis vs cell differentiation).

    ) is responsible for the second d by the model.d by the model.

    binding is lost during receptor

    tor to P2X7R by slowing down thetor to P2X7R by slowing down the e backward rates.

  • 5. Conclusions The two current phases may bcontradictory outcomes (apopt

    Receptor sensitization (dilation)phase of the current. Supportedphase of the current. Supported

    Negative cooperativity in ATP biti tisensitization.

    Ca2+ acts as an allosteric inhibitCa acts as an allosteric inhibitforward rates and increasing th

    e responsible for the seemingly osis vs cell differentiation).

    ) is responsible for the second d by the model.d by the model.

    binding is lost during receptor

    tor to P2X7R by slowing down thetor to P2X7R by slowing down the e backward rates.

  • 5. Conclusions The two current phases may bcontradictory outcomes (apopt

    Receptor sensitization (dilation)phase of the current. Supportedphase of the current. Supported

    Negative cooperativity in ATP biti tisensitization.

    Ca2+ acts as an allosteric inhibitCa acts as an allosteric inhibitforward rates and increasing th

    e responsible for the seemingly osis vs cell differentiation).

    ) is responsible for the second d by the model.d by the model.

    binding is lost during receptor

    tor to P2X7R by slowing down thetor to P2X7R by slowing down the e backward rates.

  • 5. Conclusions The two current phases may bcontradictory outcomes (apopt

    Receptor sensitization (dilation)phase of the current. Supportedphase of the current. Supported

    Negative cooperativity in ATP biti tisensitization.

    Ca2+ acts as an allosteric inhibitCa acts as an allosteric inhibitforward rates and increasing th

    e responsible for the seemingly osis vs cell differentiation).

    ) is responsible for the second d by the model.d by the model.

    binding is lost during receptor

    tor to P2X7R by slowing down thetor to P2X7R by slowing down the e backward rates.

  • 6. Current/Future W

    Use MCMC method to generategto describe the gating propertie

    Extend this approach to other pExtend this approach to other pP2X2a and P2X2b receptors.

    Estimate the number of binding

    Work

    e the best fit and the best scheme s of P2X7R.

    purinergic receptors including thepurinergic receptors including the

    g sites for Ca2+.

  • AcknowledgemenC ll b tCollaborators:-Arthur Sherman (Laboratory of B

    - Zonghe Yan (Endocrinology andNICHD, NIH)

    -Stanko Stojilkovic (EndocrinologBranch, NICH

    Funding:

    nts

    Biological Modeling, NIDDK, NIH)

    d Reproduction Research Branch,

    gy and Reproduction ResearchHD, NIH)

    ITBITB