ANAT3231: lectures overview - … lectures overview ... Stem Cell Biology Stem Cell Technology...
Transcript of ANAT3231: lectures overview - … lectures overview ... Stem Cell Biology Stem Cell Technology...
ANAT3231: lectures overview
Dr Annemiek Beverdam – School of Medical Sciences, UNSW Wallace Wurth Building Room 234 – [email protected]
Stem Cell Biology
Stem Cell Technology
Resources: http://php.med.unsw.edu.au/cell biology/
Essential Cell Biology – 3rd edition Alberts
ANAT3231: lab next week
Dr Annemiek Beverdam – School of Medical Sciences, UNSW Wallace Wurth Building Room 234 – [email protected]
Journal club presentation
Student groups
Choose 2-3 articles and send me PDFs by Friday afternoon 5 pm
ANAT3231: lectures overview
Dr Annemiek Beverdam – School of Medical Sciences, UNSW Wallace Wurth Building Room 234 – [email protected]
Stem Cell Biology
Tissue homeostasis and regeneration Stem cell biology Stem cell niches
Stem cell regulation Stem cells and cancer
ANAT3231: lectures overview
Dr Annemiek Beverdam – School of Medical Sciences, UNSW Wallace Wurth Building Room 234 – [email protected]
Stem Cell Technology
Regenerative Medicine Stem Cell Sources
Future of Regenerative Medicine Knock-out Technology
CRISPR/CAS9 Genome Editing
Regenerative medicine the clinical application of stem cells
"process of replacing or regenerating human cells, tissues or organs
to restore or establish normal function"
Stem Cell Sources for Regenerative Medicine
Multipotent
Stem cells derived from embryos
Stem cells derived from adults
Stem Cell Sources for Regenerative Medicine Waddington's model of epigenetic determination of development
Embryonal Carcinoma Cells are pluripotent
1964 – Pierce and Kleinsmith isolate EC cells from teratocarcinomas Source: gametes
Pluripotent In vitro culture and expansion
Genetic abnormalities
Embryonic Stem Cells are pluripotent
1981 – Martin Evans, Matthew Kaufman and Gail Martin
Pluripotent No genetic abnormalities
In vitro culture and expansion Ethical issues
Adult stem cells
“An undifferentiated cell, found among differentiated cells in a tissue or organ that can renew itself and can differentiate to yield some or all of
the major specialized cell types of the tissue or organ”
- Bone marrow stem cells: haematopoietic stem cells - Neural stem cells - Intestinal stem cells - Skin stem cells - Umbilical cord stem cells: haematopoietic stem cells
No ethical issues Restricted plasticity Limited quantities Hard to identify
Somatic Cell Nuclear Transfer John Gurdon, 1958
The developmental potential of nuclei of differentiated cells
Somatic Cell Nuclear Transfer
“mature, differentiated cells can be reprogrammed to become pluripotent”
Pluripotent (totipotent?) Low success rate
Genetic/phenotypic abnormalities Ethical issues
Reproductive/Therapeutic Cloning
Pluripotent (totipotent?) Low success rate
Genetic/phenotypic abnormalities Ethical issues
Nuclear Reprogramming Induced pluripotency (iPS), Yamanaka, 2006
“mature, differentiated cells can be reprogrammed to become pluripotent”
Oct4 Sox2 c-Myc Klf4
2-3 weeks
Nuclear Reprogramming Induced pluripotency (iPS), Yamanaka, 2006
“mature, differentiated cells can be reprogrammed to become pluripotent”
Oct4 Sox2 c-Myc Klf4
Stimulus-Triggered Acquisition of Pluripotency (STAP) (Obokato 2014, controversial)
Stem Cell Sources Embryonic vs Adult Stem Cells
iPS Cells
- Can generate any cell type - Easy to generate, maintain
and grow in lab - Perfect genetic match to
patient
- May retain age of parental cell
- Inheritance of mutations: teratomas
- May retain age of parental cell
- Inheritance of mutations: teratomas
The Future of Regenerative Medicine
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Future Stem Cell Technologies
1- how we can induce and maintain pluripotency? 2- how we can direct differentiation? 3- how we can cure diseased cells? 4- how we can repair mutations in cells?
Future Stem Cell Technologies
How can we direct differentiation? - Uncontrolled differentiation
- Directed differentiation
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Future Stem Cell Technologies Directed differentiation of cardiomyocytes
Mummery et al., Circ Res 2012
Future Stem Cell Technologies Directed differentiation of motor neurons
Dong et al., Nature 2014
Pluripotent stem cells
Future Stem Cell Technologies Directed differentiation of pluripotent stem cells
Future Stem Cell Technologies
How can we direct differentiation?
Directed differentiation: learn from developmental biology!
Future Stem Cell Technologies
How can we cure disease?
Disease Modeling and Drug discovery
(personalized medicine)
Future Stem Cell Technologies
How can we repair mutations in cells?
Gene Therapy:
Knock out technology
CRISPR/CAS9 genome editing
Crossing over is a natural process that happens during meiosis
Knock out technology = directed homologous recombination in pluripotent ES cells
Knock out technology
Endogenous gene
ATG
neoR
= regions of homologous DNA sequence
neoR
Targeting vector
Knock out allele
Homologous recombination
Knock out technology
Knock out technology
1 Creating knockout DNA construct
3. Heterozygous mutant ES cells
2. Generating embryonic stem cells
Chimeric mice
Genetic crosses to obtain Homozygous mutant mice
Heterozygous mutant Embryonic stem cells
Knock out technology
Knock out technology Engineering of targeting vectors
Repair mutations
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Knock out technology Engineering of targeting vectors
Expressing multiple genes from same GM locus
Gene X
Gene X
Knock out technology
Allows us to:
Study gene function in mice
Repair mutations or to express a second protein from a GM locus in ES cells
However:
Heterozygosity in recombined ES cells
(Low rates of homologous recombination)
CRISPR/Cas9 Genome Engineering (Clustered Regularly Interspaced Short Palindromic Repeats)
Guide RNA and Cas9
http://www.youtube.com/watch?v=0dRT7slyGhs
CRISPR/Cas9 Genome engineering Repair
Homology-directed repair: Provide donor template with homology arms
Gene mutation/correction/addition (Cas9 D10A mutant)
Non-homologous end joining: Small insertion/deletion
gene disruption (and occasional errors)
CRISPR/Cas9 Genome engineering Applications in Stem Cells
ES cells iPS cells
Zygotes
CRISPR/Cas9 Genome engineering Applications in regenerative medicine
http://www.youtube.com/watch?v=0dRT7slyGhs
CRISPR/Cas9 Genome engineering Repair of Cystic Fibrosis Gene CFTR
(cystic fibrosis transmembrane conductor receptor)
Schwank et al., Cell Stem Cell 2013
Forskolin -> CFTR -> expansion
In vitro assay in intestinal organoids:
Stem Cell and Gene Therapy
ANAT3231: lectures overview
Dr Annemiek Beverdam – School of Medical Sciences, UNSW Wallace Wurth Building Room 234 – [email protected]
Stem Cell Technology
Regenerative Medicine Stem Cell Sources
Future of Regenerative Medicine Knock-out Technology
CRISPR/CAS9 Genome Editing