Ali Taylan Cemgil - CmpE WEBcemgil/cemgil-cv-english-august201… · Ali Taylan Cemgil A. Taylan...

AliTaylanCemgil

A.TaylanCemgil Page1

BoğaziçiÜniversitesi,BilgisayarMühendisliği,34342Bebek,İstanbulTel:02123594731Email:[email protected]:http://www.cmpe.boun.edu.tr/~cemgil/

AREASOFRECENTINTEREST• BayesianMachineLearning,Approximateinference,MonteCarlomethods• MatrixandTensordecompositions,GraphicalModels• Applications:AudioandMusicProcessing,AnomalyDetection,FinancialModels,Privacy

EDUCATION• PhD,(2004)Mathematics,PhysicsandComputerScience

RadboudUniversityNijmegen,Nijmegen,TheNetherlandsThesis:"Bayesianmusictranscription"Advisor:HilbertJ.Kappen

• MSc.ComputerEngineering(1995)BoğaziçiUniversity,Istanbul,Turkey

• B.Sc.ComputerEngineering(1993)BoğaziçiUniversity,Istanbul,Turkey

EMPLOYMENTHISTORY• Prof.(02/2018–)

BoğaziçiUniversity,ComputerEngineering • AssociateProf.(04/2012–02/2018)

BoğaziçiUniversity,ComputerEngineering • AssistantProf.(09/2008–04/2012)

BoğaziçiUniversity,ComputerEngineering, • Postdoc,(09/2004--04/2005)and(10/2005--09/2008)

UniversityofCambridge,SignalProcessingandCommunicationsLaboratory–withSimonGodsill

• Postdoc,(02/2003--09/2004)and(04/2005--10/2005)AmsterdamUniversity,IntelligentandAdaptiveSystems–withBenKrose

• ResearchAssistant,(02/1998--02/2003)RadboudUniversityNijmegen,SNN,FoundationforNeuralNetworks,theNetherlands

• TeachingAssistant,(10/1993--02/1998) BoğaziçiUniversity,ComputerEngineering

AliTaylanCemgil


PUBLICATIONS

SelectedPublications• Simsekli,U.;Yildiz,C.;Nguyen,T.H.;Cemgil,A.T.&Richard,G.AsynchronousStochastic

Quasi-NewtonMCMCforNon-ConvexOptimizationICML2018• Capan,G.;Akbayrak,S.;Ceritli,T.&Cemgil,A.T.SumConditionedPoissonFactorization.

InternationalconferenceonLatentVariableAnalysisandSignalSeparation,LVA/ICA,2018• Kurutmaz,B;Cemgil,AT;Simsekli,UandYildirim,S.BayesianNonnegativeMatrix

FactorizationasanAllocationModel,(2017)AdvancesinApproximateBayesianInference,NIPS2017Workshop

• Bozkurt,A.K.&Cemgil,A.T.(2017)Distributedparticlefilteringunderreal-timeconstraints201725thEuropeanSignalProcessingConference(EUSIPCO),2017,1584-1588

• Simsekli,U.;Virtanen,T.&Cemgil,A.T.(2015),'Non-negativeTensorFactorizationModelsforBayesianAudioProcessing',DigitalSignalProcessing47,178-191

• Krebs,F.;Holzapfel,A.;Cemgil,A.&Widmer,G.(2015),'InferringMetricalStructureinMusicUsingParticleFilters',IEEE/ACMTransactionsonAudio,Speech,andLanguageProcessing23(5),817--827.(SCIE)

• Simsekli,U.;Yilmaz,Y.K.&Cemgil,A.T.(2013),Learningthebeta-DivergenceinTweedieCompoundPoissonMatrixFactorizationModels,ICML2013,pp.1409-1417.

• Yilmaz,K.Y.;Cemgil,A.T.&Şimşekli,U.(2011),GeneralizedCoupledTensorFactorization,in'NeuralInformationProcessingSystemsNIPS'.

• Cemgil,A.T.(2009),'BayesianInferenceinNon-negativeMatrixFactorisationModels',ComputationalIntelligenceandNeuroscience(ArticleID785152)

IdentifiersandCitationStatisticsOrchID:0000-0003-4463-8455ScopusAuthorID:15130945100ResearcherID:A-3068-2016

WebofScience(ThomsonReuters)-June2018SumofTimesCitedwithoutself-citations: 526CitingArticleswithoutself-citations: 479AverageCitationsperItem: 5.37h-index: 12

GoogleScholar(http://scholar.google.com/citations?user=X3ZFZ7AAAAAJ&hl=en)04.08.2018 All Since2013Citations 2926 1659h-index 26 20i10-index 55 39

AliTaylanCemgil


EditedBooksandBookChapters1. Barber,D.;Cemgil,A.T.&Chiappa,S.editors.BayesianTimeSeriesModels,Cambridge

UniversityPress.(2011)2. Cemgil,A.T.(2012),ATutorialIntroductiontoMonteCarlomethods,MarkovChainMonte

CarloandParticleFiltering,ElsevierMajorReferenceWorks.3. Barber,D.;Cemgil,A.T.&Chiappa,S.(2011),BayesianTimeSeriesModels,Cambridge

UniversityPress,chapterInferenceandEstimationinProbabilisticTime-SeriesModels.4. Cemgil,A.T.;Godsill,S.J.;Peeling,P.H.&Whiteley,N.(2010),TheOxfordHandbookof

AppliedBayesianAnalysis,OxfordUniversityPress,chapterBayesianStatisticalMethodsforAudioandMusicProcessing.

JournalPublicationsAllJournalswithyearsofpublication:

• IEEE/ACMTransactionsonAudio,Speech,andLanguageProcessing(2006,2010,2010,2013,2015,2015),(SCIE)

• DigitalSignalProcessing(2007,2011,2014,2015,2015,2017,2017),(SCIE)• IEEESignalProcessingMagazine(2010),(SCI)• IEEESignalProcessingLetters(2010,2015),(SCIE)• SignalProcessing(2011),(SCIE)• DataMiningandKnowledgeDiscovery(2015),(SCI/SCIE)• ComputationalIntelligenceandNeuroscience(2009),(SCIE)• Sensors(2017),(SCIE)• JournalofArtificialIntelligenceResearch(2003),(SCI)• JournalofNewMusicResearch(2001,2011,2014),(SCI,AHCI)• ComputerMusicJournal(2000),(SCIE)• EURASIPJournalonAdvancesinSignalProcessing(2011),(SCIE)• EURASIPJournalonAudio,Speech,andMusicProcessing(2012),(SCIE)

Collaborations

• JournaloftheOpticalSocietyofAmericaA(2017),(SCI)• IEEETransactionsonSignalProcessing(2014),(SCI)• IEEETransactionsonGeoscienceandRemoteSensing(2010),(SCI)• Bioinformatics(2015),(SCI/SCIE)• JournalofNeuroscienceMethods(2009)• BiomedicalSignalProcessingandControl(2016),(SCIE)• JournalofNeuralEngineering(2016),(SCI)• ComputerVisionandImageUnderstanding(2009),(SCI)• OralSurgery,OralMedicine,OralPathology,OralRadiologyandEndodontology(2001)

1. Semerci,M.;Cemgil,A.T.&Sankur,B.(2018)AnintelligentcybersecuritysystemagainstDDoS

attacksinSIPnetworksComputerNetworks,2018,136,137-1542. Oksuz,K.&Cemgil,A.T.(2018),‘AMultitargetTrackingPerformanceMetric:DeficiencyAware

SubpatternAssignment’,IETRadar,SonarandNavigation,(SCIE)3. Danis,S.andCemgil,A.T.(2017)ModelBasedLocalizationandTrackingusingBluetoothLow-

EnergyBeacons,Sensors,17,2484;doi:10.3390/s17112484(SCIE)

AliTaylanCemgil


4. BarisKurt,CagatayYildiz,TahaYusufCeritli,BulentSankur,A.TaylanCemgil.(2017)ABayesianChangePointModelforDetectingSIP-basedDDoSAttacks,DigitalSignalProcessing(Accepted)withaccompanyingfreesoftwarepublishedinSoftwareX,“AReal-TimeSIPNetworkSimulationandMonitoringSystem”(SCIE)

5. Basaran,D.;Cemgil,A.T.&Anarim,E.(2017)MultiresolutionAlignmentforMultipleUnsynchronizedAudioSequencesusingSequentialMonteCarloSamplers,DigitalSignalProcessing,(SCIE)

6. Ericok,O.B.;Cemgil,A.T.&Erturk,H.(2017)ApproximateBayesianComputationTechniquesforOpticalCharacterizationofNanoparticleClusters,JournaloftheOpticalSocietyofAmericaA,(SCI)

7. Fidaner,B.I.;Cankorur-Cetinkaya,A.;Dikicioglu,D.;Kirdar,B.;Cemgil,A.T.&Oliver,S.G.(2016),'CLUSTERnGO:auser-definedmodellingplatformfortwo-stageclusteringoftime-seriesdata',32(3),388-397,Bioinformatics.(SCI)

8. Aslan,S.;Cemgil,A.T.;Aslan,M.S.;Tureyin,B.U.&Akin,A.(2016),'JointparameterandstateestimationofthehemodynamicmodelbyiterativeextendedKalmansmoother',BiomedicalSignalProcessingandControl24,47-62.(SCIE)

9. Simsekli,U.;Liutkus,A.&Cemgil,A.T.(2015)Alpha-StableMatrixFactorization,IEEESignalProcessingLetters,2015,22,2289-2293(SCIE)

10. Simsekli,U.;Virtanen,T.&Cemgil,A.T.(2015),'Non-negativeTensorFactorizationModelsforBayesianAudioProcessing',DigitalSignalProcessing47,178-191.(SCIE)

11. Basaran,D.;Cemgil,A.&Anarim,E.(2015),'AProbabilisticModel-BasedApproachforAligningMultipleAudioSequences',IEEE/ACMTransactionsonAudio,Speech,andLanguageProcessing23(7),1160--1171.(SCIE)

12. Krebs,F.;Holzapfel,A.;Cemgil,A.&Widmer,G.(2015),'InferringMetricalStructureinMusicUsingParticleFilters',IEEE/ACMTransactionsonAudio,Speech,andLanguageProcessing23(5),817--827.(SCIE)

13. Yumlu,S.;Gurgen,F.S.;Cemgil,A.T.&Okay,N.(2015),'BayesianChangepointAndTime-varyingParameterLearningInRegimeSwitchingVolatilityModels',DigitalSignalProcessing40,198-212.(SCIE)

14. Ermis,B.;Acar,E.&Cemgil,A.T.(2015),'Linkpredictioninheterogeneousdataviageneralizedcoupledtensorfactorization',DataMiningandKnowledgeDiscovery,Springer,1-34.(SCI)

15. Ari,I.;Simsekli,U.;Cemgil,A.T.&Akarun,L.(2014),'RandomizedMatrixDecompositionsandExemplarSelectioninLargeDictionariesforPolyphonicPianoTranscription',JournalofNewMusicResearch43(3),255-265.(SCI)

16. Sübakan,Y.C.;Kurt,B.;Cemgil,A.T.&Sankur,B.(2014),'Probabilisticsequenceclusteringwithspectrallearning',DigitalSignalProcessing29,1--19.(SCIE)

17. Nielsen,J.;Christensen,M.;Cemgil,A.&Jensen,S.(2014),'BayesianModelComparisonwiththeg-Prior',SignalProcessing,IEEETransactionson62(1),225-238.(SCI)

18. Demir,C.;Saraçlar,M.&Cemgil,A.T.(2012),'Single-ChannelSpeech-MusicSeparationforRobustASRWithMixtureModels',IEEETransactionsonAudio,Speech,andLanguageProcessing.(SCIE)

19. Şimşekli,U.;Sönmez,O.;Kurt,B.&Cemgil,A.T.(2012),'CombinedPerceptionandControlforTiminginRoboticMusicPerformances',EURASIPJournalonAudio,Speech,andMusicProcessing2012.(SCIE)

20. Yılmaz,Y.K.&Cemgil,A.T.(2011),'AlgorithmsforProbabilisticLatentTensorFactorization',SignalProcessing92(8),1853-1863.(SCIE)

21. Nielsen,J.K.;Christensen,M.G.;Cemgil,A.T.;Godsill,S.J.&Jensen,S.J.(2011),'BayesianInterpolationandParameterEstimationinaDynamicSinusoidalModel',Audio,Speech,andLanguageProcessing,IEEETransactionson19(7),1986-1998.(SCIE)

AliTaylanCemgil


22. Şimşekli,U.&Cemgil,A.T.(2011),'ProbabilisticModelsforReal-TimeAcousticEventDetectionwithApplicationtoPitchTracking',JournalofNewMusicResearch40(2),175-185.(SCIE,AHCI)

23. Ülker,Y.;Günsel,B.&Cemgil,A.T.(2011),'AnnealedSMCSamplersforNonparametricBayesianMixtureModels',IEEESignalProcessingLetters.18,3-6.(SCIE)

24. Şimşekli,U.;Jylha,A.;Erkut,C.&Cemgil,A.T.(2011),'Real-TimeRecognitionofPercussiveSoundsbyaModel-BasedMethod',EURASIPJournalonAdvancesinSignalProcessing.(SCIE)

25. Barber,D.&Cemgil,A.T.(2010),'GraphicalModelsforTimeSeries',IEEESignalProcessingMagazine,Specialissueongraphicalmodels27(6),18-28.(SCI)

26. Yıldırım,S.;Cemgil,A.T.;Aktar,M.;Ozakin,Y.&Ertuzun,A.B.(2010),'ABayesianDeconvolutionApproachforReceiverFunctionAnalysis',IEEETrans.GeosicenceandRemoteSensing48(12),4151-4163.(SCI)

27. Dikmen,O.&Cemgil,A.T.(2010),'GammaMarkovRandomFieldsforAudioSourceModelling',IEEETransactionsonAudio,Speech,andLanguageProcessing18(3),589-601.(SCIE)

28. Peeling,P.H.;Cemgil,A.T.&Godsill,S.J.(2010),'GenerativeSpectrogramFactorizationModelsforPolyphonicPianoTranscription',IEEETransactionsonAudio,SpeechandLanguageProcessing18(3),519-527.(SCIE)

29. Cemgil,A.T.(2009),'BayesianInferenceinNon-negativeMatrixFactorisationModels',ComputationalIntelligenceandNeuroscience(ArticleID785152).

30. Broeke,J.H.P.;Ge,H.;Dijkstra,I.M.;Cemgil,A.T.;Riedl,J.A.;Cornelisse,L.N.;Toonen,R.F.;Verhage,M.&Fitzgerald,W.J.(2009),'Automatedquantificationofcellulartrafficinlivingcells',JournalofNeuroscienceMethods178(2),378-384.(SCIE)

31. Zivkovic,Z.;Cemgil,A.T.&Krose,B.J.A.(2009),'ApproximateBayesianmethodsforkernel-basedobjecttracking',ComputerVisionandImageUnderstanding113(6),743-749.(SCIE)

32. Cemgil,A.T.;Fevotte,C.&Godsill,S.J.(2007),'VariationalandStochasticInferenceforBayesianSourceSeparation',DigitalSignalProcessing17(5),891-913.(SCIE)

33. Cemgil,A.T.;Kappen,H.J.&Barber,D.(2006),'Agenerativemodelformusictranscription',IEEETransactionsonAudio,Speech,andLanguageProcessing14(2),679--694.(SCIE)

34. Cemgil,A.T.&Kappen,H.J.(2003),'MonteCarloMethodsforTempoTrackingandRhythmQuantization',JournalofArtificialIntelligenceResearch18,45-81.(SCIE)

35. Cemgil,A.T.;Kappen,H.J.;Desain,P.&Honing,H.(2001),'OnTempoTracking:TempogramRepresentationandKalmanFiltering',JournalofNewMusicResearch28:4,259-273.(SCIE,AHCI)

36. Sülün,T.;Cemgil,A.T.;Duc,J.M.P.;Rammelsberg,P.&Jaeger,L.(2001),'Morphologyofthemandibularfossaandinclinationofthearticulareminenceinpatientswithinternalderangementandinsymptom-freevolunteers',OralSurgery,OralMedicine,OralPathology,OralRadiologyandEndodontology92,98-107.(SCIE)

37. Cemgil,A.T.;Desain,P.&Kappen,H.J.(2000),'RhythmQuantizationforTranscription',ComputerMusicJournal24:2,60-76.(SCIE)

UnderReview1. KamerKaya,FigenOztoprak,IlkerBirbil,AliTaylanCemgil,UmutSimsekli,NurdanKuru,Hazal

Koptagel,andKaanÖztürk.HAMSI:AParallelIncrementalOptimizationAlgorithmUsingQuadraticApproximationsforSolvingPartiallySeparableProblems.(underreview-arXiv:1509.01698)

AliTaylanCemgil


2. BeyzaErmis;A.TaylanCemgil,DifferentiallyPrivateMCMCAlgorithmsforDistributedMatrixFactorization(underreview)

3. MuratSemerci,AliTaylanCemgilandBulentSankur,AnIntelligentCyberSecuritySystemAgainstDDoSAttacksinSIPNetworks,(underreview)

PeerReviewedInternationalConferencesMajorconferences,withyearsofpublicationMachineLearning

• NeuralInformationProcessingSystems(NIPS)2002,2011,2013• ArtificialIntelligenceandStatistics(AISTATS)2010• InternationalConferenceonMachineLearning(ICML)2013,2016,2017,2018• ComputerVisionandPatternRecognition(CVPR)2005• InternationalConferenceonPatternRecognition(ICPR)2004,2010,2010

SignalProcessing• IEEEInternationalConferenceonAcoustics,SpeechandSignalProcessing(ICASSP)2007,

2007,2008,2009,2012,2013,2015,2015,2017• EuropeanSignalProcessingConference(EUSIPCO)2005,2005,2007,2009,2010,2011,

2012,2012,2012,2013,2016,2017,2017• IFACSymposiumonSystemIdentification(SYSID)2012,2015• ConferenceonLatentVariableAnalysisandSignalSeparation(LVA/ICA)2007,2009,2010,

2015,2018• IEEEWorkshoponStatisticalSignalProcessing(SSP)2011,2014• IEEEMachineLearningandSignalProcessing(MLSP)2012,2012• IEEEWorkshoponApplicationsofSignalProcessingtoAudioandAcoustics(WASPAA)2003,

2005,2007,2007,2009,2011,2011• MeetingoftheInternationalSpeechCommunicationAssociation(INTERSPEECH),2010,2011

AudioandMusic• InternationalConferenceonMusicInformationRetrieval,(ISMIR)2006,2007,2015• InternationalComputerMusicConference(ICMC)2000,2001,2002,2004

1. Simsekli,U.;Yildiz,C.;Nguyen,T.H.;Cemgil,A.T.&Richard,G.AsynchronousStochasticQuasi-

NewtonMCMCforNon-ConvexOptimizationICML20182. Capan,G.;Akbayrak,S.;Ceritli,T.&Cemgil,A.T.SumConditionedPoissonFactorizationThe

internationalconferenceonLatentVariableAnalysisandSignalSeparation,LVA/ICA,20183. Şimşekli,U.;Durmus,A.;Badeau,R.;Richard,G.;Moulines,É.&Cemgil,A.T.(2017)Parallelized

StochasticGradientMarkovChainMonteCarloalgorithmsfornon-negativematrixfactorization(2017)IEEEInternationalConferenceonAcoustics,SpeechandSignalProcessing(ICASSP),2017,2242-2246

4. Yamac,M.;Sankur,B.&Cemgil,A.T.(2017)Malicioususersdiscriminationinorganizedattacksusingstructuredsparsity201725thEuropeanSignalProcessingConference(EUSIPCO),2017,266-270

5. Bozkurt,A.K.&Cemgil,A.T.(2017)Distributedparticlefilteringunderreal-timeconstraints201725thEuropeanSignalProcessingConference(EUSIPCO),2017,1584-1588

6. U.Şimşekli,R.Badeau,A.T.Cemgil,G.Richard,(2016)“StochasticQuasi-NewtonLangevinMonteCarlo”,InternationalConferenceonMachineLearning(ICML),NewYork,NY,USA,2016

7. U.Şimşekli,R.Badeau,G.Richard,A.T.Cemgil,(2016)“StochasticThermodynamicIntegration:EfficientBayesianModelSelectionviaStochasticGradientMCMC”,IEEEInternationalConferenceonAcoustics,Speech,andSignalProcessing(ICASSP),Shanghai,China,2016

8. Şimşekli,U.;Koptagel,H.;Güldaş,H.;Cemgil,A.T.;Öztoprak,F.&Birbil,.I.(2016),'Parallel

AliTaylanCemgil


StochasticGradientMarkovChainMonteCarloforMatrixFactorisationModels',arXivpreprintarXiv:1506.01418.TDA2016,WorkshoponTensorDecompositionsandApplications

9. Kurt,B.;Zeydan,E.;Yabas,U.;Karatepe,I.A.;Kurt,G.K.&Cemgil,A.T.ANetworkMonitoringSystemforHighSpeedNetworkTrafficSensing,Communication,andNetworking(SECON),201613thAnnualIEEEInternationalConferenceon,2016,1-3

10. Cemgil,A.T.;Guldas,H.;Whiteley,N.&Heine,K.(2015),APracticalIntroductiontoButterflyandAdaptiveResamplinginSequentialMonteCarlo,in'Proceedings17thIFACSymposiumonSystemIdentificationSYSID2015',pp.781-786.

11. Simsekli,U.;Liutkus,A.&Cemgil,A.T.(2015),ExtractionofTemporalPatternsinMulti-rateandMulti-modalDataset,in'12thInternationalConferenceonLatentVariableAnalysisandSignalSeparation'.

12. Srinivasamurthy,A.;Holzapfel,A.;Cemgil,A.T.&Serra,X.(2015),ParticleFiltersforEfficientMeterTrackingwithDynamicBayesianNetworks,in'ProceedingsofInternationalConferenceonMusicInformationRetrieval,ISMIR2015'.

13. Holzapfel,A.;Simsekli,U.;Senturk,S.&Cemgil,A.T.(2015),Section-LevelModelingOfMusicalAudioForLinkingPerformancesToScoresInTurkishMakamMusic,in'IEEEInternationalConferenceonAcoustics,Speech,andSignalProcessing(ICASSP2015)'.

14. Simsekli,U.;Cemgil,A.T.&Ermis,B.(2015),LearningMixedDivergencesInCoupledMatrixAndTensorFactorizationModels,in'IEEEInternationalConferenceonAcoustics,Speech,andSignalProcessing(ICASSP)',pp.2120-2124.

15. Dikmen,O.&Cemgil,A.T.(2014),SequentialMonteCarloSamplersforMarginalLikelihoodComputationinMultiplicativeExponentialNoiseModels,in'IEEEStatisticalSignalProcessingWorkshop(SSP'14)'.

16. Fidaner,I.B.&Cemgil,A.T.(2013),SummaryStatisticsforPartitioningsandFeatureAllocations,inC.J.C.Burges;L.Bottou;M.Welling;Z.Ghahramani&K.Q.Weinberger,ed.,'AdvancesinNeuralInformationProcessingSystems26',pp.261--269.

17. Simsekli,U.;Ermis,B.;Cemgil,A.T.&Acar,E.(2013),Optimalweightlearningforcoupledtensorfactorizationwithmixeddivergences,inEUSIPCO.

18. Simsekli,U.;Yilmaz,Y.K.&Cemgil,A.T.(2013),Learningthebeta-DivergenceinTweedieCompoundPoissonMatrixFactorizationModels,inSanjoyDasgupta&DavidMcallester,ed.,'Proceedingsofthe30thInternationalConferenceonMachineLearning(ICML-13)',JMLRWorkshopandConferenceProceedings,pp.1409-1417.

19. Basaran,D.;Cemgil,A.T.&Anarım,E.(2013),SMCSamplersforMultiresolutionAudioSequenceAlignment,in'InternationalConferenceonAcousticsSpeechandSignalProcessingICASSP'.

20. Arı,.I.;Cemgil,A.T.&Akarun,L.(2012),ProbabilisticInterpolativeDecomposition,in'IEEEInternationalWorkshoponMachineLearningforSignalProcessing(MLSP)'.

21. Ermis,B.;Acar,E.&Cemgil,A.T.(2012),LinkPredictionviaGeneralizedCoupledTensorFactorisation,in'ECMLPKDDColisdWorkshop'.

22. Şimşekli,U.&Cemgil,A.T.(2012),MarkovChainMonteCarloInferenceforProbabilisticLatentTensorFactorization,in'IEEEInternationalWorkshoponMachineLearningforSignalProcessing(MLSP)'.

23. Kurt,B.;Cemgil,A.;Mungan,M.;Polat,N.;Ozdogan,A.&Saygun,E.(2012),NetworkManagementwithoutPayloadInspection:ApplicationClassificationviaStatisticalAnalysisofBulkFlowData,in'FutureNetworkandMobileSummit2012ConferenceProceedings',pp.1-8.

24. Demir,C.;Saraclar,M.&Cemgil,A.T.(2012),Catalog-BasedSingle-ChannelSpeech-MusicSeparationwiththeItakura-SaitoDivergence,in'Eusipco'.

25. Yildirim,S.;Cemgil,A.T.&Singh,S.S.(2012),AnOnlineExpectation-MaximisationAlgorithmforNonnegativeMatrixFactorisationModels,in'16thIFACSymposiumonSystemIdentification(SYSID2012)'.

26. Arı,.I.;Şimşekli,U.;Cemgil,A.T.&Akarun,L.(2012),LargeScalePolyphonicMusicTranscriptionUsingRandomizedMatrixDecompositions,in'20thEuropeanSignalProcessingConference

AliTaylanCemgil


(EUSIPCO)',pp.2020-2024.27. Şimşekli,U.&Cemgil,A.T.(2012),ScoreGuidedMusicalSourceSeparationUsingGeneralized

CoupledTensorFactorization,in'20thEuropeanSignalProcessingConference(EUSIPCO)',pp.2639-2643.

28. Şimşekli,U.;Cemgil,A.T.&Yilmaz,Y.K.(2012),ScoreGuidedAudioRestorationviaGeneralisedCoupledTensorFactorisation,in'InternationalConferenceonAcousticsSpeechandSignalProcessingICASSP',pp.5369-5372.

29. Yilmaz,K.Y.;Cemgil,A.T.&Şimşekli,U.(2011),GeneralizedCoupledTensorFactorization,in'NeuralInformationProcessingSystemsNIPS'.

30. Basaran,D.;Cemgil,A.T.&Anarım,E.(2011),ModelBasedMultipleAudioSequenceAlignment,in'Proc.IEEEWorkshoponApplicationsofSignalProcessingtoAudioandAcousticsWASPAA'11',pp.13-16.

31. Cemgil,A.T.;Şimşekli,U.&Subakan,Y.C.(2011),ProbabilisticLatentTensorFactorizationFrameworkforAudioModeling,in'Proc.IEEEWorkshoponApplicationsofSignalProcessingtoAudioandAcousticsWASPAA'11',pp.137-140.

32. Keskin,C.;Cemgil,A.T.&Akarun,L.(2011),DTWBasedClusteringtoImproveHandGestureRecognition,in'HBU'.

33. Demir,C.;Cemgil,A.T.&Saraclar,M.(2011),Semi-supervisedSingle-ChannelSpeech-MusicSeparationforAutomaticSpeechRecognition,in'INTERSPEECH'.

34. Demir,C.;Cemgil,A.T.&Saraclar,M.(2011),Catalog-BasedSingle-ChannelSpeech-MusicSeparationforAutomaticSpeechRecognition,in'Proc.19thEuropeanSignalProcessingConference,EUSIPCO'11'.

35. Fevotte,C.;Cappe,O.&Cemgil,A.T.(2011),EfficientMarkovchainMonteCarloinferenceincompositemodelswithspacealternatingdataaugmentation,in'Proc.~IEEEWorkshoponStatisticalSignalProcessing(SSP)',pp.221-224.

36. Demir,C.;Cemgil,A.T.&Saraclar,M.(2011),GainEstimationApproachesinCatalog-BasedSingle-ChannelSpeech-MusicSeparation.,in'ProceedingsoftheAutomaticSpeechRecognitionandUnderstandingWorkshop(ASRU)',pp.185-190.

37. Demir,C.;Cemgil,A.T.&Saraclar,M.(2010),Catalog-BasedSingle-ChannelSpeech-MusicSeparation,in'INTERSPEECH'.

38. Yilmaz,K.&Cemgil,A.T.(2010),ProbabilisticLatentTensorfactorisation,in'Proc.ofInternationalConferenceonLatentVariableanalysisandSignalSeparation',pp.346-353.

39. Nielsen,J.K.;Christensen,M.G.;Cemgil,A.T.;Godsill,S.J.&Jensen,S.H.(2010),BayesianInterpolationinaDynamicSinusoidalModelwithApplicationtoPacket-lossConcealment,in'EUSIPCO2010'.

40. Kirbiz,S.;Cemgil,A.T.&Gunsel,B.(2010),BayesianInferenceforNonnegativeMatrixFactorDeconvolutionModels,in'ICPR'10',pp.2812-2815.

41. Ulker,Y.;Gunsel,B.&Cemgil,A.T.(2010),AnnealedSMCSamplersforDirichletProcessMixtureModels,in'ICPR'10'.

42. Şimşekli,U.&Cemgil,A.T.(2010),AComparisonofProbabilisticModelsforonlinepitchtracking,in'Proc.of7thSoundandMusicComputingConference'.

43. Ulker,Y.;Gunsel,B.&Cemgil,A.T.(2010),SequentialMonteCarloSamplersforDirichletProcessMixtures,in'AISTATS'10'.

44. Dikmen,O.&Cemgil,A.T.(2009),Unsupervisedsingle-channelsourceseparationusingbayesianNMF,in'Proc.IEEEWorkshoponApplicationsofSignalProcessingtoAudioandAcousticsWASPAA'09',pp.93--96.

45. Fevotte,C.&Cemgil,A.T.(2009),Nonnegativematrixfactorisationsasprobabilisticinferenceincompositemodels,in'Proc.17thEuropeanSignalProcessingConference(EUSIPCO'09)'.

46. Virtanen,T.O.&Cemgil,A.T.(2009),MixturesofGammaPriorsforNon-NegativeMatrixFactorizationBasedSpeechSeparation,in'ICA2009,7thInternationalConferenceonIndependentComponentAnalysisandSignalSeparation',pp.646-653.

AliTaylanCemgil


47. Yildirim,S.;Cemgil,A.T.&Ertuzun,A.B.(2009),AhybridmethodfordeconvolutionofBernoulli-Gaussianprocesses,in'Proc.IEEEInternationalConferenceonAcoustics,SpeechandSignalProcessingICASSP2009',pp.3417--3420.

48. Cemgil,A.T.&Dikmen,O.(2008),InferenceandlearningingammachainsforBayesianaudioprocessing,in'ProceedingsofAcoustics'08',pp.4055-4060.

49. Virtanen,T.;Cemgil,A.T.&Godsill,S.(2008),Bayesianextensionstonon-negativematrixfactorisationforaudiosignalmodelling,in'Proc.IEEEInternationalConferenceonAcoustics,SpeechandSignalProcessingICASSP2008',pp.1825--1828.

50. Peeling,P.;Cemgil,A.T.&Godsill,S.(2008),Bayesianhierarchicalmodelsandinferenceformusicalaudioprocessing,in'Proc.3rdInternationalSymposiumonWirelessPervasiveComputingISWPC2008',pp.278--282.

51. Cemgil,A.T.;Peeling,P.;Dikmen,O.&Godsill,S.J.(2007),PriorStructuresforTime-FrequencyEnergyDistributions,in'Proc.IEEEWorkshoponApplicationsofSignalProcessingtoAudioandAcoustics',pp.151--154.

52. Clark,D.;Cemgil,A.T.;Peeling,P.&Godsill,S.(2007),Multi-ObjectTrackingofSinusoidalComponentsinAudiowiththeGaussianMixtureProbabilityHypothesisDensityFilter,in'Proc.IEEEWorkshoponApplicationsofSignalProcessingtoAudioandAcoustics',pp.339--342.

53. Cemgil,A.T.&Dikmen,O.(2007),ConjugateGammaMarkovrandomfieldsformodellingnonstationarysources,in'ICA2007,7thInternationalConferenceonIndependentComponentAnalysisandSignalSeparation'.

54. Excell,D.;Cemgil,A.T.&Fitzgerald,W.J.(2007),GenerativeModelforHumanMotionRecognition,in'Proc.5thInternationalSymposiumonImageandSignalProcessingandAnalysisISPA2007',pp.423--428.

55. Peeling,P.;Cemgil,A.T.&Godsill,S.J.(2007),AProbabilisticFrameworkforMatchingMusicRepresentations,in'ProceedingsofInternationalConferenceonMusicInformationRetrieval'.

56. Cemgil,A.T.(2007),StrategiesforSequentialInferenceinFactorialSwitchingStateSpaceModels,in'Proc.IEEEInternationalConferenceonAcoustics,SpeechandSignalProcessingICASSP2007',pp.II-513--II-516.

57. Godsill,S.;Cemgil,A.;Fevotte,C.&Wolfe,P.(2007),Bayesiancomputationalmethodsforsparseaudioandmusicprocessing,in'15thEuropeanSignalProcessingConference'.

58. Whiteley,N.;Cemgil,A.T.&Godsill,S.(2007),SequentialInferenceofRhythmicStructureinMusicalAudio,in'Proc.IEEEInternationalConferenceonAcoustics,SpeechandSignalProcessingICASSP2007',pp.IV-1321--IV-1324.

59. vanKasteren,T.;Krose,B.&Cemgil,A.T.(2007),RealtimeSimultaneousTempoTrackingandRhythmQuantizationinMusic,in'ProceedingsofBelgian-DutchConferenceonArtificialIntelligence(BNAIC)'.

60. Whiteley,N.;Cemgil,A.T.&Godsill,S.J.(2006),BayesianModellingofTemporalStructureinMusicalAudio,in'ProceedingsofInternationalConferenceonMusicInformationRetrieval'.

61. Cemgil,A.T.(2006),SequentialInferenceforFactorialChangepointModels,in'Proc.IEEENonlinearStatisticalSignalProcessingWorkshop',pp.203--206.

62. Zajdel,W.;Cemgil,A.&Krцse,B.(2006),DynamicBayesiannetworksforvisualsurveillancewithdistributedcameras,in'1stEuropeanConferenceonSmartSensingandContext(EuroSSC)',Springer,,pp.240-243.

63. Cemgil,A.T.&Godsill,S.J.(2005),ProbabilisticPhaseVocoderanditsapplicationtoInterpolationofMissingValuesinAudioSignals,in'13thEuropeanSignalProcessingConferenceEUSIPCO'.

64. Cemgil,A.T.;Fevotte,C.&Godsill,S.J.(2005),BlindSeparationofSparseSourcesusingVariationalEM,in'13thEuropeanSignalProcessingConferenceEUSIPCO'.

65. Cemgil,A.T.&Godsill,S.J.(2005),EfficientVariationalInferencefortheDynamicHarmonicModel,in'Proc.ofIEEEWorkshoponApplicationsofSignalProcessingtoAudioandAcoustics',pp.271-274.

AliTaylanCemgil


66. Cemgil,A.T.;Zajdel,W.&Krose,B.J.A.(2005),Ahybridgraphicalmodelforrobustfeatureextractionfromvideo,inC.Schmid;S.Soatto&C.Tomasi,ed.,'Proc.IEEEComputerSocietyConferenceonComputerVisionandPatternRecognitionCVPR2005',pp.1158--1165.

67. Krose,B.;Cemgil,T.&Zajdel,W.(2004),Trackinghumans,inRJacquart,ed.,'18thWorldComputerCongress',pp.751-752.

68. Zajdel,W.;Cemgil,A.T.&Krose,B.J.A.(2004),Onlinemulticameratrackingwithaswitchingstate-spacemodel,in'Proc.17thInternationalConferenceonPatternRecognitionICPR2004',pp.339--343Vol.4.

69. Cemgil,A.T.(2004),PolyphonicPitchIdentificationandBayesianInference,in'ProceedingsoftheInternationalComputerMusicConference'.

70. Cemgil,A.T.;Kappen,B.&Barber,D.(2003),Generativemodelbasedpolyphonicmusictranscription,in'Proc.IEEEWorkshopon.ApplicationsofSignalProcessingtoAudioandAcoustics',pp.181--184.

71. Cemgil,A.;Barber,D.&Kappen,H.J.(2003),ADynamicalBayesianNetworkforTempoandPolyphonicPitchTracking,in'ProceedingsofICANN'.

72. Cemgil,A.&Kappen,H.J.(2002),IntegratingTempoTrackingandQuantizationusingParticlefiltering,in'Proceedingsofthe2002InternationalComputerMusicConference',pp.419-422.

73. Cemgil,A.T.&Kappen,H.J.(2002),TempoTrackingandRhythmQuantizationbySequentialMonteCarlo,inThomasG.Dietterich;SueBecker&ZoubinGhahramani,ed.,'AdvancesinNeuralInformationProcessingSystems14',MITPress,pp.1361-1368.

74. Cemgil,A.&Kappen,H.J.(2001),BayesianReal-timeAdaptationforInteractivePerformanceSystems,in'Proceedingsofthe2001InternationalComputerMusicConference',pp.147-150.

75. Cemgil,A.&Kappen,H.J.(2001),ADynamicBeliefNetworkImplementationforRealtimeMusicTranscription,in'ProceedingsoftheBelgian-DutchConferenceonArtificialIntelligence2001'.

76. Cemgil,A.;Kappen,H.J.;Desain,P.&Honing,H.(2000),Ontempotracking:TempogramRepresentationandKalmanfiltering,inIoannisZannos,ed.,'Proceedingsofthe2000InternationalComputerMusicConference',TheBerlinerKulturveranstaltungsGmbH,Berlin,pp.352-355.

77. Cemgil,A.T.;Desain,P.&Kappen,H.J.(1999),RhythmQuantizationforTranscription,in'ProceedingsoftheAISB'99SymposiumonMusicalCreativity',pp.140-146.

78. Cemgil,A.&Erkut,C.(1997),CalibrationofPhysicalModelsusingArtificalNeuralNetworkswithApplicationtoPluckedStringInstruments,in'ProceedingsofISMA97,InternationalSymposiumonMusicalAcoustics'.

79. Cemgil,A.T.;Caglar,H.&Anarım,E.(1995),ComparisonofWaveletFiltersforPitchDetectionofMonophonicMusicSignals,in'ProceedingsofEuropeanConferenceonCircuitTheoryandDesign,(ECCTD95)'.

Patent• Patent:EP1596334-A1;WO2005114579-A1;EP1751716-A1

"Multipleobjects/individualstrackingmethode.g.forcarinairport,involvesdefiningprobabilisticdependencybetweenlabelsandobservationofobjects,andestimatingnumberofdistinctobjectsfromposteriorprobabilitydistribution"

AliTaylanCemgil


RESEARCHGRANTS• ANR-TUBITAK, (FBIMATRIX)ParallelandDistributedMarkovChainMonteCarloforBayesian

InferenceinMatrixandTensorFactorizationModels.(withTelecomParisTech)(Granted,2017)• ECICT-10-2015.(OpenMaker),HarnessingthepowerofDigitalSocialPlatformstoshakeup

makersandmanufacturingentrepreneurstowardsaEuropeanOpenManufacturingecosystem,2years(WPLeader)StartedOct2016,(3157KEURTotal,BOUN367KEUR)

• TUBITAK113M492,(Co-investigator)(PAVERA),AdvancedParallelOptimizationAlgorithmsforBigDataAnalysisUsingMachineLearningStartingOctober2013-2016,180KTL(PIİlkerBirbil,SabancıU.-Finished)

• BAP8340,KombinatoryalNesnelerinİncelenmesiiçinİstatistikselYöntemler,Statisticalmethodsfortheanalysisofcombinatorialobjects,28.500(Finished)

• 10360GenveProteinifadesizamanserilerininistatistikselyöntemlerleincelenmesi,GeneandProteinexpressionanalysiswithtimeseries,29.300(Finished)

• FP7-PEOPLE-2012-IEF328379,Rhythmus:Agenericframeworkforanalyzingtemporalstructureinmusic(Postdoc:AndreHolzapfel),2Years,May2013-May2015,173KEUR(Finished)

• BAP6882,SosyalSistemVerilerindenBayesciTensorayrıştırmayöntemleriilebilgiçıkarımı."InformationextractionfromsocialinteractionswithBayesianTensorFactorizations",1Yıl,Ekim2012-Ekim2013,34KTL(Finished)

• TUBITAK110E292,DurağanOlmayanÇokBoyutluZamanSerileriİçinHızlıBayesciMatrisveTensörAyrıştırmaYöntemleri(BAYTEN)"FastBayesianMatrixandTensorfactorisationmethodsfornonstationarymultivariatetimeseriesanalysis",2Yıl,Nisan2011-Nisan2013,150KTL,EuropeanBilateralprojectwithCNRS,TelecomParisTechFrance(Finished)

• BAP5723,Ağyapılarınıntensörayrıştırmaileistatistikselmodellenmesi."StatisticalModellingofNetworksviaTensorFactorisations",Years,Jan2011-June2012,30KTL(Finished)

• BAP1875,BayesciNegatifOlmayanMatrisveTensorAyrışımınıileSesveMüzikVerisiİşlemeUygulamaları."Bayesianmatrixandtensorfactorisationsforaudioandmusicprocessing"Ocak2010-Ocak2011,20KTL(Finished)

• TUBITAK107E050,(Danışman)ZamanserileriileBayescikaynakayrıştırma."BayesianSourceSeparationwithtimeseriesmodels",2007-2009,160KTL(PIAysinErtuzun,Bogazici)(Finished)

• EPSRCEPD03261X1,(NamedResearcher)ProbabilisticModellingofMusicalAudioforMachineListening,3Years,17.10.2005-17.10.2008,UniversityofCambridge(PI,SimonGodsill)(Finished)

Startup• CofoundedAlgosisin2013withpostdocYenerUlker,postdocArmanBoyacijoinedlater.

Aspinoffcompanythatdevelopsfinancialinvestmentstrategiesandsoftwareforpersonalizedportfoliomanagement,

o TUBITAKTEYDEB1507(2017-),YatırımStratejileriTasarımveYönetimSistemi,InvestmentGrantno7160355(500TRY)(Ongoing)

o TUBITAKTEYDEB1507(2015-2016),PortföyYönetimSistemleriveAlgoritmikİşlemPlatformuTasarımı(Portfoliomanagementsystemsandalgorithmictradingtransactionplatform),Grantno7150327(500KTRY)(Finished)

AliTaylanCemgil


o TUBITAKTEYDEB1512(2014-2015)Finansalzamanserilerininmodellenmesivealgoritmikalım-satımsistemleri(Modellingfinancialtimeseriesandalgorithmictradingsystems)(150KTRY)

IndustrialResearchProjects/Consultancy• CustomerscoringBKM(InterbankCardCenter)(2018)• IndoorLocatlizationwithLowenergybeacons.POI(2018)• Informationextractionfromlargelogdata.Sahibinden.com(2017)• DetectionofCreditCardFraud,BKM(InterbankCardCenter)(2017)• DDOSandFrauddetectioninSIPnetworks,Netas(2015-2017)• RecommendationsysteminretailbasedoniBeaconlocalizationandcustomerhabits,(2015-

2016)• Gamerprofilingfrombehaviourdataforchurnprediction,Gamegos(2016)• CloudbasedplatformforIoT,acasestudyinprivacypreservingmachinelearning,Koc

Sistem(2014-2016)• Estimationofsizedistributionsinnetworkpacketflows,withAvea,(2014-2015)• PredictiveDiallingSystemforCallcenters,Alotech,(2013)• ProbabilisticExpertSystemsforplantdiseases,Doktar,(2011)• StatisticaltechniquesforApplicationclassificationNetworkpacketdatawithoutDeepPacket

Inspection(DPI),EricssonTürkiye,Istanbul(FP7Mevico)(2012)• StatisticalModelsforTeletraffictrendPrediction,P1M1,Istanbul,Turkey(2011-2012)• MultitrackAudiomatching,foraCanadabasedcompany(2011)• Frauddetectionintransactiondata,forFeatureSpace,Cambridge(2008)• Audioprocessingandsourceseparation,CEDARaudio,Cambridge(2008)• InertialNavigationandGPSintegrationusingparticlefiltering,foraCambridge,UK,based

company(2007)• Trackingofvesiclesinaxonsanddendritesfromvideosequences,forCenterfor

NeurogenomicsandCognitiveResearch(CNCR),VU,Amsterdam(2007)

TEACHINGEXPERIENCE(F:Fall,S:Spring,Su:SummerSemesters)

UndergraduateCMPE250,DataStructuresandAlgorithms(F10,S11,F11,S12,F12,S13,F13,F14,F15,F16,F17,F18)CMPE362,SignalProcessingforComputerEngineering(F08,F09)CMPE482,NumericalLinearAlgebra,(S14,S15,S16,S17)CMPE462,MachineLearning,(S18)

GraduateCMPE547(was58K),BayesianStatisticsandMachineLearning(F08,F09,F10,F11,F12,F13,F14,F15,S17,F18)CMPE548(was58N),MonteCarloComputation(S09,F09,S11,S12,S13,S14,S15,S16,F17)CMPE58P,MachineListening(S09,S10,withAndreHolzapfelS15)

AliTaylanCemgil


CMPE58R,StatisticalDataAnalysis(withWilliamFitzgeraldSu11)SWE501,ObjectOrientedProgramming(S16,S17)SWE546,DataMining(S12,S13,S14,S15,S16,S17)SWE582,MachineLearningforDataAnalytics,(F15,F16,F17)FE587,C/C++ProgrammingforFinance(F10,F11,F12,F13,F14,F15)FE588,PythonProgrammingforFinancialEngineering(F16,F17)

AliTaylanCemgil


SUPERVISION

Postdoc1. AndreHolzapfel(2013-2015)(MarieCuriefellow),Rhythmus,nowassist.Prof.atKTH,

Sweden2. YenerUlker(Algosis),FinancialDataAnalysis,AlgorithmicTrading3. ArmanBoyaci(OpenMaker)SocialMediaMonitoring

PhD-graduated

(AsThesisAdvisor)1. IşıkBarışFidaner(2010-2016),(withProf.BetülKırdar)BayesianNonparametrics,

Bioinformatics,2. UmutŞimşekli(2010-2015),TensorFusion:LearningInHeterogeneousandDistributedData,

nowAssist.Prof.TelecomParisTech,France3. KenanYilmaz(2009-2012),BayesianMatrixandTensorFactorisations,nowPaloAlto

Networks,Heidelberg,Germany4. OnurDikmen(2006-2009),Bayesian Source Modelling for Single-Channel Audio Separation,

now Researcher in U. of Helsinki, Finland

(Co-advisor)1. DoğaçBaşaran(2008-2015)(EminAnarim,EE),MultichannelSourceSeparationandAudio

matching,nowpostdocinIRCAM,Paris,France2. CemilDemir(2009-2014,withMuratSaraclar,EE),SpeechMusicSeparation3. CemKeskin(2009-2012),(withLaleAkarun,CMPE),ActivityRecognitionwithDynamic

models,nowatGoogle,MountainView4. PaulPeeling(2006-2008,withSimonGodsill),PolyphonicMusicTranscription,nowat

Mathworks,CambridgeUK.5. WojciechZajdel(2003-2004,UvA,withBenKrose),MultiCamera,Multiobjecttrackingand

recognition,EagleVision,TheNetherlands

PhD(Inprogress)1. BarışKurt(2010-),StatisticalAnalysisofInternetTraffic,Amazon,Berlin2. BeyzaErmiş(2012-),PrivacyPreservingCoupledTensorFactorisations,Amazon,Berlin3. ErtuğKaramatli(2012-),DeepLearningforpolyphonicmusictranscription,4. CanerTürkmen(2015-),BayesianinferencemethodsforHawkesProcesses5. MuratSemerci(2015-)KernelsandTensorbasedMethods,NowatDaimlerResearch,Berlin,

Germany6. GökhanÇapan(2015-),LearningRepresentationsofHumanBehaviour7. MelihBarsbey(2017-)

MScThesessupervised

1. MineÖğretir(2016-2018)CollaborativeFilteringandContentBasedHybridModelsforRecommendingScientificArticles,NowPhDstudentatBoğaziçiUniversity

2. AlperKamilBozkurt(2015-2018)ParallelResamplingForReal-TimeSequentialMonteCarlo,nowPhDstudentatDukeUniversity,ECE,USA

AliTaylanCemgil


3. SemihAkbayrak(2016-2018)TensorDecompositionModelsforKnowledgeGraphs,NowPhDstudentinEindhovenTechnicalUniversity,theNetherlands

4. YasinAlmalioglu(2015-2017)EndoSensorFusion:ParticleFiltering-BasedMulti-SensoryDataFusionwithSwitchingState-SpaceModelforEndoscopicCapsuleRobotsusingRecurrentNeuralNetworkKinematics,nowPhDstudentatUniversityofOxford

5. AbdulkdirCelikkanat(2016-2017)UniformSamplingandExactCountingAlgorithmsforSimpleGraphswithPrescribedDegreeSequences,nowPhDstudentinParisSaclay

6. CagatayYildiz(2014-2017)InferenceandParameterEstimationinBayesianChangePointModels,nowPhDstudentatAaltoUniversity,Finland

7. TahaYusufCeritli(CSE)(2015-2017)ModelingBoundedDatawithSumConditionedPoissonFactorization,nowPhDstudentatAlanTuringInst.andUniversityofEdinburgh,UK

8. KemalOksuz(2015-2016)Multiobjecttracking,PhDstudentinMETU9. HakanGuldas(2011-2015),(withNickWhiteley)Particlefilteringwithboundedinteractions,

NowPhDstudentinLeiden,theNetherlands

10. CemSübakan(2011-2014),(withBulentSankur),SequenceClassificationwithNonparametricBayesianandSpectralMethods,NowPhDstudentinUUIC

11. TürkanHamzaoğlu(2010-2012),StatisticalAnalysisofNetworks,Finansbank12. BeyzaErmiş(2011-2012),(withEvrimAcar)MatrixandTensorFactorisationsforLink

Prediction,nowPhDstudentinBogazici13. SafiyeÇelik(2011-2012),NonparametricBayesianBiclustering,PhDstudentinUniversityof

Washington14. UmutŞimşekli(2010),RealtimepitchtrackingwithBayesianchangepointmodels,Now

facultyatParisTech,France15. SinanYıldırım(2008-2009,withAysinErtüzün,EE),BayesianDeconvolutionofseismic

signals,NowFacultyatSabancı16. TimvanKasteren(2004-2005),(AmsterdamUniversity)Realtimetempotrackingfor

interactivemusicperformancesystems

EDITORIAL• Areachair,NeuralInformationProcessingSystemsConferenceNIPS(2017,2018)• Associateeditor,DigitalSignalProcessing,Elsevier(2011-2014)• Associateeditor,IEEESignalProcessingLetters(2011-2015)• GuestEditor,SpecialIssueinmemoryofBillFitzgerald,`BayesianSignalProcessing’,Elsevier,

DigitalSignalProcessing(2014)• IEEEMLSP(MachineLearningforSignalProcessing)technicalcommittee(2011-2013)

REFEREE

Projectproposalpanelmember• ResearchFoundationofPortugal(FCT–FundacaoparaaCienciaeaTechnologia)• TurkishResearchFoundation(TUBITAK)TEYDEBand1001Panels• FinnishFundingAgencyforTechnologyandInnovation• ResearchFoundation–FlandersBelgium(FondsWetenschappelijkOnderzoek-Vlaanderen,

FWO)• DutchResearchFoundation(NWO–NederlandsWetenschappelijkOnderzoek)• EPSRC(EngineeringandPhysicalSciencesResearchCouncil)UK

AliTaylanCemgil


Refereedfor• IEEETransactionsonSignalProcessing,• IEEETransactionsonNeuralNetworks,• IEEETransactionsonAudio,SpeechandLanguageProcessing,• IEEETransactionsonImageProcessing,• IEEETransactionsonAerospaceandElectronicSystems,• IEEETransactionsonSystems,ManandCybernetics• IEEESignalprocessingLetters,• BayesianStatistics,• JournalofNewMusicResearch• CognitiveScience,• Neurocomputing,• MachineLearning,• DigitalSignalProcessing,• SignalImageandVideoProcessing,• JournalofAmericanStatisticalAssociation,• Biometrica

Conferences• AAAI(ConferenceofAssociationfortheAdvancementofArtificialIntelligence)• NIPS(NeuralInformationProcessingSystems),• ICML(InternationalConferenceofMachineLearning)• ICMC(InternationalComputerMusicConference),• ISMIR(InternationalConferenceonMusicInformationRetrieval),• EUSIPCO(EuropeanSignalProcessingConference),• IEEEICASSP(InternationalConferenceonAcoustics,SpeechandSignalProcessing),• IEEEMLSP(MachineLearningforSignalProcessing),• AISTATS(InternationalConferenceonArtificialIntelligenceandStatistics)

WORKSHOPORGANIZATIONS• NeuralInformationProcessingSystems(NIPS)Workshops,Whistler,Canada,

o AdvancesinModelsforAcousticProcessing,Dec2006,(withDavidBarber)o MusicInformationProcessingSytems,Dec2004,(withDouglasEckandDanielEllis)

• InIEEEISPA,Int’lSymposiumonImageandSignalProcessingandAnalysis,Istanbul,Turkey,o SpecialSessiononBayesianSignalProcessing,Sept2007

• IsaacNewtonInstituteforMathematicalSciences,Cambridge,UK18,19,20Haziran2008,Cambridge,UK

o WorkshoponInferenceandEstimationinProbabilisticTime-SeriesModels(DavidBarberandSilviaChiappa)

• InEuropeanSignalProcessingConference(EUSIPCO’09),Aug2009,Glasgow,o SpecialSessiononNonegativeMatrixandTensorFactorisations:StatisticalMethods

andApplications(CedricFevotte)• SIAMConferenceonComputationalScienceandEngineering(CSE13)minisymposiaon

Tensorfactorizationsandinformationfusion,Feb2013,Boston(withEvrimAcar,RasmusBro)

AliTaylanCemgil


• InInternationalconferenceonLatentVariableAnalysisandSignalSeparation(LVA/ICA2018)o StructuredTensorDecompositionsandApplications(withUmutSimsekliand

LaurentAlbera)

PhDThesisJury• Sept2014,AaltoUniversity,Helsinki,Finland,Opponent(HeZhang,Dissertation:“Advances

inNMFdecompositionwithapplicationstoClusteranalysis”)• Oct2013,EcolePolytechnique,Paris,France,JuryMember(OlivierSchwander,Dissertation:

InformationGeometricmethodsformixturemodels)• Oct2013,BogaziciUniversity,Istanbul,Turkey(NeseAlyuz,Dissertation:ThreeDimensional

FaceRecognitionUnderOcclusionVariance)• June2013,SabanciUniversity,Istanbul,Turkey,JuryMember(EmadMonuirGrais)• March2013,TechnicalUniversityofDenmark(DTU),JuryMember,(BjørnSansJensen,

Dissertation:Integrationoftop-downandbottom-upinformationforaudioorganizationandretrieval)

• Nov2012,ParisTech,Paris,France,JuryMember,(AntoineLiutkus,Dissertation:Processusgaussienspourlaséparationdesourcesetlecodageinformé–GaussianProcessesforinformedSourceSeparationandCoding)

• May2012,CatholicUniversityofLeuven,Leuven,Belgium,Jurymember,(JorisDriesen,Dissertation:DiscoveringWordsinSpeechusingMatrixFactorization)

• June2012,UniversityofCambridge,UK,ExternalExaminer(LiamLang,Dissertation:KinematicsinConformalGeometricAlgebrawithApplicationsinStrapdownInertialNavigation.)

• July2008,UniversityofCambridge,InternalExaminer(JiWonYoon)• June2008,UniversityofCambridge,InternalExaminer(HaifengGe)

InvitedSeminars

Tutorials• VBYO(DataScienceSummerSchool)TETAMBogaziciUniversity2017(over100participants)• BYOYO(SummerschoolonMachineLearning)BogaziciUniversity2018,

http://byoyo.cmpe.boun.edu.tr/(over500participants)• March2018,IsBank,IstanbulTurkey• VBYO(DataScienceSummerSchool)TETAMBogaziciUniversity2017(over100participants)• VBYO(DataScienceSummerSchool)NesinMathVillage2016(over100participants)• VBYO(DataScienceSummerSchool)NesinMathVillage2015(over100participants)• January2017,Ford/Otosan,IstanbulTurkey• November2016,IsBank,IstanbulTurkey• October2015,EMOSummerSchool,MatematikKoyu,Yenice,Izmir,Turkey• May2014,Avea,Istanbul,Turkey• May2013,KuveytTurkishBank,Istanbul,Turkey• December2012,IstanbulChamberofCommerce,Istanbul,Turkey• June2012The19thIstanbulStatisticalPhysicsMeeting,Istanbul,Turkey• August2010TuruncSummerSchoolonComplexSystems,Mugla,Turkey

AliTaylanCemgil


• March2009,InternationalFederationofClassificationSocieties(IFCS)2009Conference,Dresden,Germany

• June2008,IEEEInternationalConferenceonMultimediaandExpo,Hannover,Germany• September2007,ACMMultimediaConference,Augsburg,Germany• June2007,BirkbeckCollege,UniversityofLondon• October2006,InternationalConferenceonMusicInformationRetrieval,Victoria,Canada• February2006,Eylül2006,BogaziciUniversity,Istanbul• March2006.IEEProfessionalDevelopmentCourseonAdaptiveSignalProcessing,

Birmingham,UK.• April2003andJuly2005,ASCI(AdvancedSchoolforComputingandImaging)Summer

schoolonAdvancedIssuesinNeurocomputing,Amsterdam,theNetherlands

InvitedResearchSeminars

• UniversityofKarlsruhe,2000• UniversityofEdinburgh,2002• UniversityofCambridge,2004,• UniversityofMassachusetts,2004• IndianaUniversityBloomington,2005• UniversityofLille,2005• UniversityCollegeLondon-GatsbyNeuroscienceUnit,2007• UniversityofLondon-QueenMary,2005• RadboudUniversityNijmegen,2007• UniversityofAmsterdam,2002,2007• FreeUniversityofAmsterdam(VU)-CNCR,2007• SabanciUniversity,Ocak2007,Mart2009• MicrosoftResearchCambridge,Aug2007• NIPS2007WorkshoponMusic,BrainandCognition,December2007• IstitutodiScienzaeTecnologiedell'Informazione"A.Faedo",Pisa,May2008• 154'thmeetingofAcousticalSociety,Paris,July2008• IstanbulTechnicalUniversity,Subat2009• TelecomParisTech,Paris,June2011• UniversityofCambridge,June2011• GoogleResearch,NewYork,October2011• NIPS2011WorkshoponMachineLearningandMusic,December2011• XeroxResearchCenterEurope,XRCE,Grenoble,April2012• KoçUniversity,April2012• KatholiekeUniversiteitLeuven-ESAT,May2012• UniversityofCambridge,October2012• MicrosoftResearchCambridge,October2012• TélécomParisTech,Paris,November2012• BilkentUniversity,IndustrialEng.,December2012• MitsubishiElectricResearchLabs(MERL),Boston,February,2013• Lyriclabs,AnalogDevicesInc,Boston,February2013

AliTaylanCemgil


• ECML/PKDDWorkshop:TensorMethodsforMachineLearning,Prague,September2013,• AaltoUniversity,Finland,Sept2014• TutorialonTensors,LVA/ICA,Liberec,ChechRepublic,Aug.2015• TélécomParisTech,Paris,June2017

AdministrativeDuties• ErasmusandExchangeStudentscoordinator(2008-2014)• Studentadvisor(2010-2014)• DepartmentofComputerEng.vicehead(2015-)

Languageskills• Turkish(Native)• English(Excellent)• German(Good)• Dutch(Good)• Music(ProfessionalElectricBassPlayer1988-1998,ConservatoryofAmsterdam2001-2004,

SemiProfessionalsince2008)

MaritalStatusandCitizenship• DateofBirth:28Jan1970• Partner:AsliCemgil,with2kids(Defne(2005),AliSinan(2010))• Dual:Turkey(bybirth)andTheNetherlands(since2004)

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