A Functional Collagen Adhesin Gene, acm, in Clinical …fecal isolates showed collagen adherence....

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INFECTION AND IMMUNITY, Sept. 2008, p. 4110–4119 Vol. 76, No. 9 0019-9567/08/$08.000 doi:10.1128/IAI.00375-08 Copyright © 2008, American Society for Microbiology. All Rights Reserved. A Functional Collagen Adhesin Gene, acm, in Clinical Isolates of Enterococcus faecium Correlates with the Recent Success of This Emerging Nosocomial Pathogen Sreedhar R. Nallapareddy, 1,2 Kavindra V. Singh, 1,2 Pablo C. Okhuysen, 1,2 and Barbara E. Murray 1,2,3 * Division of Infectious Diseases, Department of Internal Medicine, 1 Center for the Study of Emerging and Re-Emerging Pathogens, 2 and Department of Microbiology and Molecular Genetics, 3 University of Texas Medical School, Houston, Texas 77030 Received 24 March 2008/Returned for modification 21 May 2008/Accepted 20 June 2008 Enterococcus faecium recently evolved from a generally avirulent commensal into a multidrug-resistant health care-associated pathogen causing difficult-to-treat infections, but little is known about the factors responsible for this change. We previously showed that some E. faecium strains express a cell wall-anchored collagen adhesin, Acm. Here we analyzed 90 E. faecium isolates (99% acm ) and found that the Acm protein was detected predominantly in clinically derived isolates, while the acm gene was present as a transposon- interrupted pseudogene in 12 of 47 isolates of nonclinical origin. A highly significant association between clinical (versus fecal or food) origin and collagen adherence (P < 0.0003) was also demonstrated, and levels of adherence were highly correlated (r 0.879) with the amount of cell surface Acm detected by whole-cell enzyme-linked immunosorbent assay and flow cytometry. Thirty-seven of 41 sera from patients with E. faecium infections showed reactivity with recombinant Acm, while only 4 of 30 community and hospitalized patient control group sera reacted (P < 0.0003); importantly, antibodies to Acm were present in all 14 E. faecium endocarditis patient sera. Although pulsed-field gel electrophoresis indicated that multiple strains expressed collagen adherence, multilocus sequence typing demonstrated that the majority of collagen-adhering isolates, as well as 16 of 17 endocarditis isolates, are part of the hospital-associated E. faecium genogroup referred to as clonal complex 17 (CC17), which has emerged globally. Taken together, our findings support the hypothesis that Acm has contributed to the emergence of E. faecium and CC17 in nosocomial infections. Enterococcus faecium, generally considered a normal mam- malian gut commensal, has emerged in the last 2 decades as a significant nosocomial pathogen (11, 14, 22). In addition to an increased incidence of E. faecium infections, increased mor- bidity and mortality due to vancomycin-resistant E. faecium (VRE) bacteremia have also been reported, particularly among patients neutropenic from cancer chemotherapy, those receiving dialysis, and those who have undergone liver or bone marrow transplantation (6). For example, a recent study (30) reported VRE intestinal colonization in 40% of 92 neutropenic patients, of which 34% developed bacteremia with this organ- ism, with a subsequent mortality rate of 36%, despite treat- ment with recently available drugs such as linezolid and dap- tomycin; this is in marked contrast to the decades before VRE emerged, when E. faecium infections were rarely seen. Acquisition of resistance to vancomycin preceded by emer- gence of resistance to ampicillin, impacting the primary ther- apies of choice for nonresistant strains, has been assumed to be the major factor responsible for transforming this organism from its docile, commensal nature into a significant nosocomial pathogen (14). It has also been postulated that the recent clinical success of E. faecium exemplified by the hospital-asso- ciated E. faecium genogroup, also called clonal complex 17 (CC17), which accounts for the majority of clinical isolates (11), is due at least in part to the acquisition or evolution of putative virulence-associated traits, such as enterococcal sur- face protein (Esp) and a hyaluronidase-like gene (hyl) (23). However, a contribution of these traits to E. faecium patho- genesis has not been demonstrated, and we found them in only 49% and 28%, respectively, of clinical E. faecium isolates (23). The recent emergence of resistance to newer antibiotics, in- cluding quinupristin-dalfopristin, linezolid, and daptomycin, by VRE strains emphasizes the need for alternative therapeutic strategies, which might include immunoprophylaxis or immu- notherapy by targeting in vivo-expressed virulence-associated surface proteins. Evidence from other gram-positive pathogens suggests that the adhesin family of proteins may serve as po- tential candidates for the development of novel immunother- apies (24). It was recently shown that combination therapy with vancomycin plus anti-clumping factor A antibodies was more effective than vancomycin alone in sterilizing rabbit valvular vegetations in infective endocarditis caused by methicillin-re- sistant Staphylococcus aureus (29). Recently, we identified the collagen-binding adhesin Acm as a primary and, to date, only documented adhesin of E. faecium (20). Acm has an N-terminal signal peptide, followed by a collagen binding A domain, a variable number of B repeats, and a C-terminal region for sorting and anchoring to pepti- doglycan. Although we demonstrated that the gene encoding this adhesin (acm) was present in all 32 E. faecium isolates tested (20), unlike its staphylococcal homologue Cna, which is present in 38 to 56% of isolates (26), only 55% of 20 infection- derived clinical isolates and none of the 10 community-derived * Corresponding author. Mailing address: Division of Infectious Diseases, Department of Internal Medicine, University of Texas Med- ical School at Houston, 6431 Fannin Street, MSB 2.112, Houston, TX 77030. Phone: (713) 500-6745. Fax: (713) 500-6766. E-mail: bem.asst @uth.tmc.edu. Published ahead of print on 30 June 2008. 4110 on April 6, 2020 by guest http://iai.asm.org/ Downloaded from

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Page 1: A Functional Collagen Adhesin Gene, acm, in Clinical …fecal isolates showed collagen adherence. Sequencing of the acm locus for six non-collagen-adherent E. faecium isolates identified

INFECTION AND IMMUNITY, Sept. 2008, p. 4110–4119 Vol. 76, No. 90019-9567/08/$08.00�0 doi:10.1128/IAI.00375-08Copyright © 2008, American Society for Microbiology. All Rights Reserved.

A Functional Collagen Adhesin Gene, acm, in Clinical Isolates ofEnterococcus faecium Correlates with the Recent Success of

This Emerging Nosocomial Pathogen�

Sreedhar R. Nallapareddy,1,2 Kavindra V. Singh,1,2 Pablo C. Okhuysen,1,2 and Barbara E. Murray1,2,3*Division of Infectious Diseases, Department of Internal Medicine,1 Center for the Study of Emerging and Re-Emerging Pathogens,2

and Department of Microbiology and Molecular Genetics,3 University of Texas Medical School, Houston, Texas 77030

Received 24 March 2008/Returned for modification 21 May 2008/Accepted 20 June 2008

Enterococcus faecium recently evolved from a generally avirulent commensal into a multidrug-resistanthealth care-associated pathogen causing difficult-to-treat infections, but little is known about the factorsresponsible for this change. We previously showed that some E. faecium strains express a cell wall-anchoredcollagen adhesin, Acm. Here we analyzed 90 E. faecium isolates (99% acm�) and found that the Acm proteinwas detected predominantly in clinically derived isolates, while the acm gene was present as a transposon-interrupted pseudogene in 12 of 47 isolates of nonclinical origin. A highly significant association betweenclinical (versus fecal or food) origin and collagen adherence (P < 0.0003) was also demonstrated, and levelsof adherence were highly correlated (r � 0.879) with the amount of cell surface Acm detected by whole-cellenzyme-linked immunosorbent assay and flow cytometry. Thirty-seven of 41 sera from patients with E. faeciuminfections showed reactivity with recombinant Acm, while only 4 of 30 community and hospitalized patientcontrol group sera reacted (P < 0.0003); importantly, antibodies to Acm were present in all 14 E. faeciumendocarditis patient sera. Although pulsed-field gel electrophoresis indicated that multiple strains expressedcollagen adherence, multilocus sequence typing demonstrated that the majority of collagen-adhering isolates,as well as 16 of 17 endocarditis isolates, are part of the hospital-associated E. faecium genogroup referred toas clonal complex 17 (CC17), which has emerged globally. Taken together, our findings support the hypothesisthat Acm has contributed to the emergence of E. faecium and CC17 in nosocomial infections.

Enterococcus faecium, generally considered a normal mam-malian gut commensal, has emerged in the last 2 decades as asignificant nosocomial pathogen (11, 14, 22). In addition to anincreased incidence of E. faecium infections, increased mor-bidity and mortality due to vancomycin-resistant E. faecium(VRE) bacteremia have also been reported, particularlyamong patients neutropenic from cancer chemotherapy, thosereceiving dialysis, and those who have undergone liver or bonemarrow transplantation (6). For example, a recent study (30)reported VRE intestinal colonization in 40% of 92 neutropenicpatients, of which 34% developed bacteremia with this organ-ism, with a subsequent mortality rate of 36%, despite treat-ment with recently available drugs such as linezolid and dap-tomycin; this is in marked contrast to the decades before VREemerged, when E. faecium infections were rarely seen.

Acquisition of resistance to vancomycin preceded by emer-gence of resistance to ampicillin, impacting the primary ther-apies of choice for nonresistant strains, has been assumed to bethe major factor responsible for transforming this organismfrom its docile, commensal nature into a significant nosocomialpathogen (14). It has also been postulated that the recentclinical success of E. faecium exemplified by the hospital-asso-ciated E. faecium genogroup, also called clonal complex 17

(CC17), which accounts for the majority of clinical isolates(11), is due at least in part to the acquisition or evolution ofputative virulence-associated traits, such as enterococcal sur-face protein (Esp) and a hyaluronidase-like gene (hyl) (23).However, a contribution of these traits to E. faecium patho-genesis has not been demonstrated, and we found them in only49% and 28%, respectively, of clinical E. faecium isolates (23).The recent emergence of resistance to newer antibiotics, in-cluding quinupristin-dalfopristin, linezolid, and daptomycin, byVRE strains emphasizes the need for alternative therapeuticstrategies, which might include immunoprophylaxis or immu-notherapy by targeting in vivo-expressed virulence-associatedsurface proteins. Evidence from other gram-positive pathogenssuggests that the adhesin family of proteins may serve as po-tential candidates for the development of novel immunother-apies (24). It was recently shown that combination therapy withvancomycin plus anti-clumping factor A antibodies was moreeffective than vancomycin alone in sterilizing rabbit valvularvegetations in infective endocarditis caused by methicillin-re-sistant Staphylococcus aureus (29).

Recently, we identified the collagen-binding adhesin Acm asa primary and, to date, only documented adhesin of E. faecium(20). Acm has an N-terminal signal peptide, followed by acollagen binding A domain, a variable number of B repeats,and a C-terminal region for sorting and anchoring to pepti-doglycan. Although we demonstrated that the gene encodingthis adhesin (acm) was present in all 32 E. faecium isolatestested (20), unlike its staphylococcal homologue Cna, which ispresent in 38 to 56% of isolates (26), only 55% of 20 infection-derived clinical isolates and none of the 10 community-derived

* Corresponding author. Mailing address: Division of InfectiousDiseases, Department of Internal Medicine, University of Texas Med-ical School at Houston, 6431 Fannin Street, MSB 2.112, Houston, TX77030. Phone: (713) 500-6745. Fax: (713) 500-6766. E-mail: [email protected].

� Published ahead of print on 30 June 2008.

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fecal isolates showed collagen adherence. Sequencing of theacm locus for six non-collagen-adherent E. faecium isolatesidentified a pseudogene in five of them (20), and genetic anal-ysis confirmed that Acm is sufficient to mediate the attachmentof E. faecium strains to collagen (18, 20). In our most recentstudy, we identified the minimal and high-affinity binding sub-segments of Acm and showed that antibodies against theseAcm subsegments inhibited collagen adherence of E. faeciumcells (16).

In the current investigation, we first studied the collagen-adhering capability of an additional 90 E. faecium isolates,derived from human infections, community feces, and animals,and found a highly statistically significant association betweena clinical origin as the source of the isolate and collagen typeI adherence. We next tested for the presence of an uninter-rupted acm gene and surface expression of Acm to confirm theinvolvement of Acm in this collagen adherence by the diversecollection of isolates. We have also taken advantage of ourcollection of sera from patients with E. faecium endocarditis tolook for evidence that Acm is produced during infections, evenif the infecting strain does not produce Acm in vitro understandard laboratory growth conditions. The molecular epide-miological analyses of this study, supported by experimentalendocarditis data from the companion paper (19), suggest thatexpression of Acm, the mediator of collagen adherence of E.faecium, is important for successful competition of this speciesin the clinical setting.

MATERIALS AND METHODS

Bacterial strains and growth media. Ninety E. faecium strains isolated over 18years from diverse locations (Argentina, Belgium, China, Spain, Germany, Nor-way, and several cities in the United States) were included in this study. Theseisolates included some from endocarditis specimens (n � 11), other clinicalspecimens (Other-Clin group) (n � 31), community-derived human feces (n �26), and animals (either meat products or feces of cattle, chickens, turkeys, orswine) (n � 23). The sources of the Other-Clin isolates included blood, bile,catheters, sputum, urine, and several types of wounds, among others, and severalisolates in this group are representative of epidemic and outbreak strains (1, 3,8, 10, 13, 28). Six additional endocarditis isolates for which we assessed theadherence phenotype in our previous study (20) were included for further char-acterization. An allelic replacement acm deletion mutant, TX6051 (TX0082�acm::cat) (18), was included as a control strain for flow cytometry analysis.

Brain heart infusion (BHI) broth and agar (Difco Laboratories, Detroit, MI)were used for routine E. faecium growth.

Colony hybridization for species identification and determination of genepresence. All of the E. faecium isolates, initially identified to the species level bybiochemical tests, were confirmed by high-stringency colony hybridization, usingintragenic efafm and aac(6�)-li probes, as previously described (7, 25). The pres-ence of the acm gene among the 90 isolates of this study was tested by colonyhybridization, using an intragenic acm probe amplified using the AcmF2 andAcmR1 primers, which were described earlier (20). The presence of esp and hylgenes, coding for an enterococcal surface protein (Esp; marker for a putativepathogenicity island) and a putative hyaluronidase (Hyl), presumptively involvedin virulence or epidemicity, were tested by colony hybridization using intragenicesp and hyl probes as described earlier (23).

Adherence assay. All isolates were tested for adherence to collagen type I(Sigma Chemical Co., St. Louis, MO) and bovine serum albumin (BSA), using apreviously described assay (20).

Acm-specific polyclonal antibodies. Production of rabbit polyclonal antibodiesagainst the recombinant Acm A domain (rAcm A) was described elsewhere (20).Acm A domain-specific antibodies were eluted from rAcm A coupled to cyano-gen bromide-activated Sepharose 4B according to the manufacturer’s protocol(Amersham Biosciences, Piscataway, NJ). The antibodies were concentrated byultrafiltration with a 10,000-Da-molecular-mass-cutoff filter (Millipore, Bedford,MA) and dialyzed against phosphate-buffered saline (PBS), and concentrationswere determined by absorption spectroscopy.

Whole-cell ELISA. Surface expression of Acm on E. faecium cells was detectedby a whole-cell enzyme-linked immunosorbent assay (ELISA) using affinity-purified Acm A domain (binding domain)-specific antibodies, as described ear-lier (20). Antiserum raised against formalin-killed TX0016 whole cells (21) wasused as a control to confirm that whole cells of all strains were actually bound tothe microtiter plates.

Flow cytometry. For flow cytometry analysis, bacteria were grown in BHI brothuntil entry into stationary phase and washed twice with PBS; 100 �l of bacteriaadjusted to an optical density at 600 nm (OD600) of 0.2 in PBS was added to anEppendorf tube containing 40 �l of newborn calf serum (Sigma) and incubatedfor 30 min at room temperature. After centrifugation at 10,000 � g for 6 min, 100�l of 20-�g/ml preimmune or affinity-purified anti-rAcm A specific antibodies indilution buffer (PBS containing 20% newborn calf serum and 0.1% BSA) wasadded. Incubation was performed at 4°C for 2 h. The bacteria were washed twicewith 400 �l of 0.1% BSA in PBS, and 100 �l of 1:100 diluted goat anti-rabbitimmunoglobulin G (IgG) conjugated with F(ab�)2 fragment-specific R-phyco-erythrin (Jackson Immunoresearch, West Grove, PA) in dilution buffer wasadded and incubated at 4°C for 2 h. After being washed thrice with 400 �l of0.1% BSA in PBS, cells were resuspended in 500 �l of 1% paraformaldehyde inPBS and were analyzed with a Coulter Epics XL AB6064 flow cytometer (Beck-man Coulter) and System II software.

PCR method for screening IS element interruptions and sequencing. Chro-mosomal DNAs from E. faecium isolates were prepared as described earlier (33).PCR and sequencing of the acm locus were performed using previously de-scribed primers (20). Screening for pseudogenes due to interruption by insertionelements (IS elements) was performed by PCR with three sets of overlappingprimers, namely, AcmF1-AcmR4, AcmF2-AcmR1, and AcmF3-AcmR3 (20),that cover the entire acm locus. Randomly chosen PCR products were sequencedby the Taq BigDye Terminator method (Applied Biosystems, Foster City, CA) toconfirm the predictions and to identify the IS element.

Human sera. From our serum collection, four study groups were selected foranalysis. Sera from 14 patients with E. faecium endocarditis constituted onegroup. A second group consisted of 27 serum samples collected from patientswith E. faecium nonendocarditis infections in hospitals in Nebraska, New York,Delaware, Michigan, New Jersey, Illinois, and Pennsylvania. The third groupconsisted of 15 sera that had been obtained for routine chemistry testing fromhospitalized patients, with no knowledge of their diagnosis; these sera wereincluded as a control group (nonhealthy control sera). The final group consistedof 15 human sera from healthy volunteers (normal human sera [NHS]); thesesera were included as a healthy control group. Twenty additional NHS, previ-ously pooled in groups of three to five, were used for the determination of serumtiters, as described below.

Western blotting and Acm antibody titer determination. The cloning of the E.faecium TX2555 acm gene, coding for all 501 amino acids of the Acm A domain,and expression and purification of Acm have been described elsewhere (20).rAcm A protein was electrophoresed in 4 to 12% NuPAGE bis-Tris gels (In-vitrogen, San Diego, CA) under reducing conditions in 3-[N-morpholino] pro-panesulfonic acid buffer and transferred to a polyvinylidene difluoride mem-brane. The presence of anti-Acm antibodies was detected by incubation witheither E. faecium endocarditis patient serum (antibody I) or NHS obtained fromhealthy volunteers, followed by horseradish peroxidase-conjugated goat anti-human IgG antibodies (antibody II) and development with 4-chloronaphthol inthe presence of H2O2.

ELISAs using human sera and rAcm A protein were performed as previouslydescribed (17). For ELISA, each serum was assayed in duplicate in serial dilu-tions of 1:16 to 1:1,024 in 1% BSA. The sum of the average OD450 value and twotimes the standard deviation for the pooled NHS was calculated for each dilutionand used as the cutoff value for determining serum titers.

PFGE. Agarose plugs containing genomic DNA were digested with SmaI orApaI, and pulsed-field gel electrophoresis (PFGE) was performed using a pre-viously described method (15), but with ramped pulse times of 2 s and 30 s. SinceSmaI profiles were more discriminatory for some isolates and ApaI profiles weremore discriminatory for others, we used both for analysis. PFGE was performedfor all 17 endocarditis-derived E. faecium isolates (including 6 previously de-scribed isolates) (20) and 6 collagen-adhering isolates from the Other-Clin groupwith broad geographical and temporal diversity.

MLST. Multilocus sequence typing (MLST) and analysis of allelic profiles ofE. faecium isolates were performed as described previously (9), with the use ofprimer sequences available at http://efaecium.mlst.net/misc/info.asp. Differentsequences of a given locus were assigned allele numbers, and different allelicprofiles were assigned sequence types (STs). MLST was carried out for oneisolate of the PF1 pulsotype, one of the PF2 pulsotype, and seven distinct

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pulsotype strains. Eight of these were derived from endocarditis samples, andone was from the Other-Clin group (see Results for details on PF numbers).

Drug susceptibility testing. Vancomycin and ampicillin susceptibilities weredetermined by agar dilution, with concentrations ranging from 4 to 64 �g/ml;MICs of �16 �g/ml of ampicillin and �32 �g/ml of vancomycin were consideredresistant, according to CLSI guidelines (4, 5).

Statistical analyses. Fisher’s exact test was used to determine the statisticalsignificance of the differences observed in collagen adherence phenotypes ofdifferent strain groups. To determine if a correlation existed between collagenadherence and Acm surface detection, Pearson’s correlation coefficient (r) wascalculated. One-tailed Student’s t test was used to compare Acm antibody levels(at a 1:16 dilution) among the three groups of subjects.

RESULTS AND DISCUSSION

Association of clinical origin and collagen adherence in E.faecium isolates from four continents. Since our previous pilotsurvey (20) with 32 isolates suggested a relationship between invitro collagen adherence and clinical origin, we extended thisanalysis to a diverse group of 90 additional E. faecium isolates(including isolates of animal origin) from our collection. Eightof 11 (73%) endocarditis-derived isolates and 18 of 31 (58%)Other-Clin isolates showed in vitro adherence (defined as�5% of cells adhering [20]) to collagen type I (see Fig. 1,which also shows data for the 30 nonlaboratory isolates previ-ously reported [20]). All four catheter-derived infection iso-lates (Other-Clin group) showed collagen adherence, and thepercentages of cells showing adherence among these strainsranged from 10.2 to 54.5%. In contrast, only 1 of 25 commu-nity-derived isolates from feces of healthy volunteers and 2 of23 animal-derived isolates adhered to collagen, and this adher-ence was at a low level, as shown in Fig. 1. A highly statisticallysignificant difference was observed between the percentages ofadherent strains in the endocarditis group and the community-derived fecal isolate group or the animal isolate group (P �0.0001 and P � 0.0003, respectively; Fisher’s exact test), as wellas between the Other-Clin group and each of the nonclinical

groups (P � 0.0001 and P � 0.0002, respectively). Althoughthe percentage of in vitro collagen-adhering isolates was foundto be higher in the endocarditis group (73%) than in thenonendocarditis Other-Clin group (58%), this difference wasnot significant. The consistent association of clinical origin andadherence, observed in two independent studies (here and inour previous pilot survey [20]) with different isolates from fourcontinents, suggests that collagen adhesion may be a risk factorthat enhances the ability of E. faecium to survive, colonize,and/or cause infection in the clinical setting.

Our further investigations in this study were designed to testthe hypotheses that (i) Acm is the primary collagen adhesin for

FIG. 2. Correlation between collagen adherence and surface dis-play of Acm by 31 E. faecium strains (11 endocarditis isolates, 10Other-Clin isolates, and 5 isolates from each of the nonclinicalgroups). Adherence percentages were plotted as a function of OD450values from a whole-cell ELISA using E. faecium strains and affinity-purified anti-rAcm A-specific antibodies (P � 0.0001 for correlation).

FIG. 1. Adherence of E. faecium isolates to immobilized collagen type I. Data points for 90 isolates in this study represent mean percentagesof cells adhering � standard deviations; data for 30 additional previously reported E. faecium nonlaboratory isolates (20) are shaded in gray.Isolates were considered to adhere if �5% of total labeled cells adhered to collagen coating the well (34).

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isolates of diverse origins under the growth conditions tested;(ii) the acm gene may be expressed during severe E. faeciuminfections, such as endocarditis, even in isolates that do notproduce Acm in vitro; and (iii) a functional acm gene maycorrelate with the increased occurrence of the hospital-associ-ated E. faecium cluster of the distinct genogroup CC17.

The amount of surface Acm correlates with collagen adher-ence. To investigate the correlation between Acm and collagentype I adherence by diverse isolates, we assessed surface ex-pression of Acm, using anti-Acm A domain affinity-purifiedantibodies in a whole-cell ELISA. Thirty-one E. faecium iso-lates, including 11 endocarditis isolates representing nine pulso-types (see below), 10 Other-Clin isolates, and 5 isolates fromeach of the nonclinical groups, were tested (Fig. 2). All of the19 collagen-adhering strains were positive in this assay, and theOD450 values of these strains ranged from 0.252 to 0.672 (Fig.2), while the OD450 values for all 31 strains with preimmuneIgs ranged from 0.002 to 0.112 (data not shown). When thecollagen adherence percentages of the respective strains were

plotted as a function of the level (OD450) of surface-exposedAcm, regression analysis showed that the amount of surfaceAcm correlated strongly (r � 0.879; P � 0.0001) with thedegree of collagen adherence (Fig. 2).

To further test whether the observed variation in collagenadherence of different isolates is due to variability in Acmsurface expression, we next quantified surface expression of allfive nonadhering and four adhering endocarditis isolates byfluorescence-activated cell sorting analysis using Acm A-do-main-specific antibodies and preimmune Igs. The binding ofanti-Acm to the surfaces of all four collagen-adhering strains(TX0074, TX2535, TX0082, and TX2658) was readily detected(Fig. 3A to D) and correlated well with the various levels ofcollagen adherence observed in these strains. Furthermore,anti-Acm did not exhibit any measurable binding to the sur-faces of three nonadhering strains (TX0016, TX0080, andTX6051 [TX0082 �acm]) and bound to only a minor fraction(4.1 to 6.6%) (Fig. 3E to J) of three other nonadhering strains(TX0068, TX0110, and TX0111). Thus, our results indicate

FIG. 3. Quantitation of Acm surface expression by fluorescence-activated cell sorting analysis. (A to D) Analysis of four endocarditis-derivedcollagen-adhering E. faecium isolates exhibiting different levels of collagen adherence. Percentages of radiolabeled cells adhering to collagen were43%, 36%, 11%, and 6% for TX0074, TX2535, TX0082, and TX2658, respectively. (E to J) Analysis of five non-collagen-adhering E. faeciumendocarditis isolates and an acm deletion mutant of TX0082. Percentages of radiolabeled cells adhering to collagen were 2.3%, 2.7%, 3.9%, 2.3%,and 2.2% for TX0016, TX0068, TX0080, TX0110, and TX0111, respectively. Bacteria were analyzed by flow cytometry, using side scatter as thethreshold for detection. Specific binding by anti-Acm antibodies is indicated as log fluorescence intensity on the x axis. Each histogram represents50,000 events (bacterium-sized particles). PI, preimmune Igs; anti-Acm, anti-Acm A-domain-specific Igs.

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that the level of collagen adherence is related to the amount ofAcm on cell surfaces as well as to the percentage of cellsexpressing Acm.

Taken together, these surface Acm results corroborate ourstudies of acm constructs (18, 20), demonstrating that surfacelocalization of Acm is necessary and sufficient for collagen typeI adherence in clinical strains belonging to multiple pulsotypes(see below) under the growth conditions used.

IS element-mediated disruptions of the acm gene are fre-quent in isolates of nonclinical origin. Since a previous surveyof 56 E. faecium strains from Brazil showed the absence of acmin one E. faecium isolate from a healthy human (2), we firstscreened the isolates of this study for the presence of the acmgene. Hybridization results showed that 89 of 90 (99%) E.faecium isolates carried the acm gene, thus confirming its verywidespread nature; the exception was a purK allele 6 (non-CC17) poultry isolate susceptible to both ampicillin and van-comycin. Since this isolate served as a negative control forsurface expression studies, we have included it in the total n forthis study.

Because we previously found an acm pseudogene amongsome nonadherent isolates, with interruptions by IS elements(20), we next screened the 89 acm-positive isolates of this studyfor acm interruption by PCR with overlapping primers cover-ing the entire acm locus, followed by sequencing of selectedstrains. The results showed interruption of acm (leading to apseudogene) in 0% of endocarditis isolates, 6% of Other-Clinisolates, 24% of community fecal isolates, and 27% of animalisolates and accounted for the nonadherence phenotype ofapproximately one quarter of the nonclinical group isolates;disruptions mapped to three regions and were caused by fourtypes of IS elements (Fig. 4). Although our earlier pilot study

(20) found that two of six nonadherent isolates had a mutationleading to a premature stop codon, additional sequencing wasnot performed, except for that of endocarditis isolates includedin our companion study (19).

Precise excision of IS256 from the acm pseudogene of clin-ical strain TX2466 in the presence of collagen as a mechanismfor increased expression of Acm. Among two pseudogene-containing Other-Clin isolates, one (TX2466), in which acmwas interrupted by IS256, was noted to show a faint band byPCR that corresponded to the size of an uninterrupted acmsequence, suggesting spontaneous excision of IS256 from acm.After growth in collagen-supplemented (0.1 mg/ml) BHIbroth, this strain showed a slight increase in collagen adher-ence (Fig. 5A). In addition, comparison of this strain by fluo-rescence-activated cell sorting after passage of cells in collag-en-coated wells versus passage in BHI showed an increase inthe percentage of cells (from 2.8% to 16%) expressing Acmon the surface (Fig. 5B). Subsequent testing of 700 coloniesof TX2466 by PCR after repeated passages in wells coated withimmobilized collagen showed no completely revertant colo-nies, although a higher-intensity, intact-size band was detect-able in the mixture of cells after enrichment (Fig. 5C); se-quencing of the eluted intact-size band identified preciseexcision of the 1,332-bp IS256, including the initially dupli-cated 8-bp target site (Fig. 5D). Whether “permanent” rever-tant colonies could be obtained under different conditions re-mains to be seen. Similar IS256-mediated modulation ofexpression of a polysaccharide intercellular adhesin was previ-ously demonstrated for staphylococci (35).

Anti-Acm antibodies are present in all patients with E. fae-cium endocarditis, including those whose infecting isolates donot express Acm in vitro. An indirect assessment of in vivo

FIG. 4. PCR detected acm disruptions in 14 different E. faecium isolates. (A) Schematic representation showing the positions of disruptionsby different IS elements analyzed in isolates of this study and a previous study (20). RBS, predicted ribosomal binding site; S, signal peptide; Adomain, nonrepetitive collagen binding domain; B domain, domain with variable number of repeats in different strains; W, cell wall domain withmotif required for sortase-mediated surface anchoring; M, membrane-spanning domain; and C, charged C-terminal domain. (B) Distribution ofdisrupted acm genes among 89 acm-positive E. faecium isolates from this study. †, the four collagen-adherent and two nonadherent endocarditisisolates of our previous study included in this study for molecular epidemiological analyses and surface expression level studies also had anuninterrupted acm gene (20); *, a single isolate of animal origin lacked acm.

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expression is the demonstration of a serological response. Weinitially screened five E. faecium endocarditis patient sera andeight NHS from a healthy control group by Western blotting.Among the five endocarditis sera, two reacted strongly andthree reacted moderately, suggesting that in vivo surface ex-pression of Acm by different strains had occurred in thesepatients (Fig. 6A); none of the sera from healthy controlsreacted with Acm. We then quantitatively assayed the presenceof Acm A-domain-specific antibodies from four different se-rum groups, described in Materials and Methods. Strikingly, all14 E. faecium endocarditis sera in our collection (including the5 used in Western blot analyses) showed reactivity (Fig. 6B)with rAcm A. Titers of the reactive E. faecium endocarditissera against rAcm A varied from 1:16 to �1:1,024. The endo-carditis patient serum that showed the lowest titer (1:16) alsoshowed low titers against total enterococcal surface proteins(data not shown). Of particular interest, among the five endo-carditis isolates that did not show collagen adherence (includ-ing two from a previous study [20]) (Fig. 1) or reaction withanti-rAcm A antibodies in vitro (Fig. 3), sera were availablefrom four of the patients infected with these organisms. Allfour patient sera had substantial antibodies to Acm (Fig. 6B,black circles), despite our inability to demonstrate the pres-

ence of Acm or collagen adherence in vitro, supporting thenotion that Acm was expressed by these strains in vivo, eventhough it was not expressed in vitro.

A total of 23 of 27 (85%) sera from E. faecium nonendocar-ditis Other-Clin infections showed Acm antibody levels thatwere greater than the control serum levels, and the remaining4 sera from this group showed reactivity equal to that of con-trols. Of the 15 nonhealthy control sera from hospitalizedpatients, 12 reacted at levels that were the same or lower thanthose of NHS and three had elevated anti-Acm antibody levels.Clinical information was not obtained for these randomly cho-sen nonhealthy control sera. Thus, we predicted that the threepositive patients may have had a prior E. faecium infection orhad cross-reacting antibodies. Likewise, 1 of 15 healthy controlgroup sera also had anti-Acm antibodies. A statistically signif-icant difference was observed between the endocarditis groupand the nonendocarditis Other-Clin group versus each of thecontrol group sera (P � 0.0003). Taken together, our resultssuggest that Acm is produced during most E. faecium infec-tions and promotes a host immune response.

The presence of a functional acm gene correlates withincreased occurrence of the hospital-associated E. faeciumgenogroup CC17. To examine the possibility that the collagen

FIG. 5. IS256-mediated modulation of acm expression in E. faecium strain TX2466. (A) Enhanced collagen adherence of acm pseudogene-containing E. faecium isolate TX2466 after growth in collagen-supplemented BHI broth. (B) Fluorescence-activated cell sorting analysis of TX2466grown in BHI or grown in wells coated with collagen. PI, preimmune Igs; anti-Acm, anti-Acm A-domain-specific Igs. (C) Agarose gel electro-phoresis of colony PCR amplification with primers AcmF1 and AcmR4, using a mixture of cells before and after repeated passages in wells coatedwith immobilized collagen. (D) Schematic representation of the IS256 insertion site and its precise excision, confirmed by sequencing of the acmgene of TX2466. The duplicated target sequences of IS256 transposase are boxed.

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adherence seen in isolates of clinical origin might representdissemination of closely related isolates, PFGE typing wasperformed with a subset of isolates (see Materials and Meth-ods). Among the 23 isolates analyzed, 8 isolates (6 endocarditisisolates, 1 catheter isolate, and 1 wound isolate, isolated be-tween 1988 and 2002 in several hospitals in Texas) were cate-gorized as “closely related” or “possibly related” (�3- or 3- to6-band difference) (27) and were designated pulsotype PF1(Fig. 7A). We also found another group (PF2) with two “pos-sibly related” endocarditis isolates from Arizona and Texas(Fig. 7A). In Fig. 7B, 12 individual strains showing consider-able heterogeneity (�7- to 11-fragment difference) in PFGEfingerprints are shown, along with single representatives ofPF1 and PF2. It is interesting that the adherence percentages

of PF1 isolates also varied to a great extent, ranging from 6%to 36%. Hybridization of PFGE Southern blots of chromo-somal digestion fragments with an acm probe showed hybrid-ization to the same-sized bands in all but one of the relatedisolates and to 11 differently sized fragments in those that weredifferent by PFGE (data not shown). Taken together, ourPFGE analysis showed that collagen adherence was found inat least 15 clearly different pulsotypes, thus demonstratingthat collagen adherence is not limited to closely relatedisolates.

To evaluate more long-term evolutionary relationships, wenext used MLST (9) with a subset of distinct pulsotype isolates(see Materials and Methods) and compared the results with aninternational E. faecium MLST data set (available at www.mlst

FIG. 6. Reactivity of human serum with rAcm A protein. (A) Immunoblots of rAcm A protein probed with human sera. Lanes 1, 2, and 4 to6, sera from different patients with E. faecium endocarditis; lane 3, molecular size standards; lanes 7 to 14, NHS obtained from healthy volunteers.(B) Distribution of anti-Acm A domain Ig titers in human sera. The four endocarditis patient sera that had antibodies to Acm but whose infectingstrain lacked in vitro collagen adherence and surface Acm are shaded in black. Sera from hospitalized patients as well as healthy volunteers wereused as two groups of controls.

FIG. 7. Analysis of 23 E. faecium isolates by PFGE. (A) SmaI PFGE profiles of PF1, PF2, and other strains. Six endocarditis, one catheter, andone wound isolate, isolated between 1992 and 2002 from several hospitals in Texas, were categorized as PF1. Two endocarditis isolates fromArizona and Texas were categorized as possibly related (PF2). (B) SmaI PFGE profiles of strains with distinct PFGE patterns. Nonendocarditisisolates belonging to the Other-Clin group are marked with the symbol “§”.

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.net); the results showed that eight of the nine isolates typedare ancestrally related. As shown in Table 1, the STs obtainedwere ST17 (n � 4), ST18 (n � 2), ST16 (n � 1), ST154 (n �1), and ST337 (n � 1); of these, the first four STs, which aresingle-locus variants of each other, represent 16 isolates (basedon the PFGE results) and are part of the distinct nosocomialhigh-risk CC17 genogroup, which has a global distribution (11,32). High genome plasticity observed in CC17 strains due totheir having significantly more mobile elements in theirgenomes (12) could explain the evolution of the chromosomesof these CC17-linked clinical strains, thus leading to thedistinct PFGE patterns observed here.

Since the purK allele used in MLST has been defined as anepidemic marker of CC17 lineage (31), we also characterizedthe purK alleles of the remaining 9 endocarditis isolates, 16 (8collagen-adhering and 8 nonadhering isolates) isolates fromthe Other-Clin group, and 8 isolates from each nonclinicalgroup. Twenty-three of 25 clinical isolates contained purK1(characteristic of the hospital-associated CC17 lineage, butfound infrequently in other STs), while the remaining twocontained purK2 and purK6. Although purK2 and purK6 differfrom purK1 by 1 and 2 nucleotides, respectively, these allelesare frequently encountered in nonclinical isolates (9). Thenonclinical group isolates had a diverse group of purK alleles,including purK2 (n � 2), purK3 (n � 2), purK6 (n � 5), purK8(n � 4), purK9 (n � 1), purK17 (n � 1), and purK22 (n � 1).

The overall combined results of PFGE, MLST, and purKallele analyses implicated 39 of 42 clinical isolates and 0 of 16nonclinical isolates as being CC17 related. Another strikingobservation was that among the 17 endocarditis isolates ob-tained from various geographical locations in the United Statesfrom 1992 to 2002, all but 1 belongs to the CC17 genogroup.

Testing for vancomycin and ampicillin resistance showed avery strong association between ampicillin resistance, clinicalorigin, and collagen adherence (Table 2); however, vancomy-cin resistance (predominantly vanA) was found in both clinical(74%) and animal (48%) isolate groups. All vancomycin-resis-tant animal isolates were from Europe. Although the presenceof esp and of hyl was independently associated with clinicalorigin, as anticipated from previous reports (11, 23), thesegenes were each present in only 41% of endocarditis isolates

and 36 to 71% of Other-Clin group isolates (Table 2). Thesedata support the previously proposed hypothesis of acquisitionof ampicillin resistance and then vancomycin resistance, as wellas activation (e.g., acm) or acquisition (e.g., esp or hyl) of othergenetic traits to facilitate infection, colonization, and/or trans-mission, although the order of these events cannot currently bedetermined (11, 23, 31).

In summary, analysis of E. faecium strains of multiple pulso-types showed a collagen adherence phenotype in 62% of clin-ical versus 6% of nonclinical isolates. In vitro production ofAcm was found to be very highly correlated with a collagenadherence phenotype, supporting the concept that Acm is theprimary collagen adhesin of E. faecium in vitro. Our resultsalso demonstrate that the amount of Acm detected on bacte-rial cell surfaces is the primary determinant of the observedvariation in collagen adherence of individual strains. Impor-

TABLE 2. Frequencies of ampicillin and glycopeptide resistance aswell as esp and hyl genes among E. faecium strains

of diverse origins

Epidemiologic source (n)

No. of isolatesresistant to:

No. ofisolates

withgene

Ampicillin Vancomycin(vanA, vanB) esp hyl

Endocarditis patients (17)a 17 12 (10, 2) 7 7Collagen adherent (12) 12 9 (7, 2) 3 4Nonadherent (5) 5 3 (3, 0) 4 3

Other-Clin isolates (31) 28 24 (17, 7) 20 10Collagen adherent (18) 18 16 (11, 5) 12 4Nonadherent (13) 10 8 (6, 2) 8 6

Community fecal isolates (25) 0 3 (3, 0) 0 0Collagen adherent (1) 0 0 0 0Nonadherent (24) 0 3 (3, 0) 0 0

Animal isolates (23) 2 11 (11, 0) 0 0Collagen adherent (2) 0 2 (2, 0) 0 0Nonadherent (21) 2 9 (9, 0) 0 0

a Includes six isolates from our previous study (20), including four collagen-adherent and two nonadherent strains.

TABLE 1. Ancestral relatedness of a subset of E. faecium isolates exhibiting distinct pulsotypes

Strain Clinical source; origin; yr of isolation/collection Ampicillin/vancomycinMICs (�g/ml)a

Presence ofesp/hylb PFGE typec

MLST type (allelic profilesfor atpA, ddl, gdh, purK,

gyd, pstS, and adk)

TX2400 Blood; Galveston, TX; 1994 64/64 �/� PF9 ST16 (1, 2, 1, 1, 1, 1, 1)TX0067d Endocarditis/blood; Houston, TX; 1994 64/�4 �/� PF4 ST17 (1, 1, 1, 1, 1, 1, 1)TX0082d Endocarditis/blood; Houston, TX; 1999 64/64 �/� PF1 ST17 (1, 1, 1, 1, 1, 1, 1)TX0110d Endocarditis/blood; Houston, TX; 2002 64/64 �/� PF2 ST17 (1, 1, 1, 1, 1, 1, 1)TX0080 Endocarditis/blood; Worcester, MA; 1996 64/64 �/� PF7 ST17 (1, 1, 1, 1, 1, 1, 1)TX0016e Endocarditis/blood; Houston, TX; 1992 16/�4 �/� PF3 ST18 (7, 1, 1, 1, 5, 1, 1)TX0068 Endocarditis/blood; Worcester, MA; 1994 64/�4 �/� PF5 ST18 (7, 1, 1, 1, 5, 1, 1)TX0081 Endocarditis/blood; Baltimore, MD; 1996 64/64 �/� PF8 ST154 (9, 2, 1, 1, 1, 1, 1)TX0074 Endocarditis/blood; Valhalla, NY; 1995 64/64 �/� PF6 ST337f (5, 3, 1, 38, 8, 6, 1)

a MICs of �16 �g/ml for ampicillin and �32 �g/ml for vancomycin are considered to indicate resistance.b �, gene present; �, gene absent.c A distinct PFGE type was defined as differing by more than six fragments from other types.d Isolates were from the same hospital.e Designated DO in previous studies (20).f Non-CC17 isolate.

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tantly, the presence of antibodies to Acm in all 14 endocarditispatient sera and 85% of sera from other E. faecium infectionstested provides evidence of Acm production in vivo duringserious infections. Among the 17 endocarditis isolates, wefound Acm production in vitro with 12 isolates and indirectevidence of Acm production in vivo during endocarditis withan additional 4 isolates. The extent of surface display of Acmand its highly conserved nature (19), along with our recent datashowing that antibodies against Acm subsegments inhibit col-lagen adherence of E. faecium (16), underscore the possibilityof using Acm as a target for immunoprophylaxis or in combi-nation with antibiotics (29). Finally, while antibiotic resistancecertainly contributes to the difficulty in managing E. faeciuminfections, its contribution to the increase in frequency of thisorganism in nosocomial infections remains less certain. In-deed, vancomycin resistance is not uncommon in strains ofnon-CC17 origin in animals and in commensal strains fromhealthy humans in Europe, which very rarely, if ever, causeinfection. In conclusion, the results from our molecular epide-miological analyses, together with the data from our compan-ion paper demonstrating Acm’s role in E. faecium endocarditis(19), suggest that a functional acm gene, a predictor of colla-gen adherence, helps to explain the increased virulence poten-tial of the CC17 epidemic genogroup.

ACKNOWLEDGMENTS

We acknowledge the many physicians and researchers around theworld who provided isolates for our 30-year strain and serum col-lection. We express our sincere thanks to Karen Jacques-Palaz forher technical help and Karen Ramirez for her help in flow cytom-etry. We thank Rob Willems, The Netherlands, for his help insubmitting MLST sequences to the database and his insights on theCC17 genogroup.

This work was supported by NIH grant R01 AI 67861 from theDivision of Microbiology and Infectious Diseases, NIAID, to B.E.M.This work was partially supported by NIH (CTSA) grant UL1RR024148 to P.C.O.

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Editor: S. R. Blanke

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