22nd Century Road Map

11
2100 Hillol Sarkar Paradigm Shift

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Bio-Informatics

Transcript of 22nd Century Road Map

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2100

Hillol Sarkar

Paradigm Shift

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Cell division

The process of cell division is central to life. The last stage, when two daughter cells split from each other, has fascinated scientists since the dawn of cell biology in the Victorian era. For just as long, it has been notoriously difficult to study this final step, when the dividing cell creates a furrow before cleaving in two.

The name given to this process by those early biologists, Cytokinesis, translates as "cell movement" and captures the sense of a highly active and organized series of events. Scientists have now learned much more about the proteins involved and their behavior, and yet a central mystery remains: How does the cell signal where the furrow should be?  

There is a simple reason for that blind spot: It’s hard to see and test such a complex feat in living cells. Now Harvard Medical School systems biologists report in Science that they have reconstituted Cytokinesis—complete with signals that direct molecular traffic—without the cell. Combining frog-egg extracts with lipid membranes that mimic the membrane of the cell, they built a cell-free system that recapitulates how the cleavage furrow is assembled.

This cell-free system has two huge advantages: It expands the scale of the furrow-building events, making them easier to see, and it gives the researchers an easy way to manipulate the proteins involved. Quickly removing and returning proteins to see how changes in the molecular players affect Cytokinesis is impossible when the cell is whole, but easy when the cellular innards are spread out on a microscope slide.  

The key challenge, though, was that the behavior of Cytokinesis is entirely dependent on having a membrane to furrow—and membranes are exactly what have to be removed to

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make the system cell-free. What made this work possible was the realization that a controlled, flat membrane—made from two layers of artificial lipid supported on glass—could substitute for the curved, constantly moving and complex membrane of the cell.

“We really built what goes on in the cell,” said Timothy Mitchison, the Hasib Sabbagh Professor of Systems Biology at HMS. “We believe our work is a step forward, not only for understanding the assembly of the cleavage furrow but also, more generally, for understanding the biophysics of cytokinesis signaling.”

The team includes co-senior authors Mitchison and Christine Field, HMS instructor in systems biology, and co-lead authors Phuong Nguyen, a graduate student in chemical biology, and Aaron Groen, a research fellow in systems biology.

Their work began with gently crushing unfertilized egg cells from the Xenopus frog and isolating their internal contents. Scientists have previously used such egg extracts to reconstitute microtubule-based structures called mitotic spindles that align chromosomes properly in preparation for cell division. The HMS team went further.

To start, the scientists turned to their molecular stockpile to come up with such building blocks as artificial centrosomes and fluorescently labeled microtubules. They then mimicked fertilization and added labeled antibodies or proteins to visualize the self-organization of structures required for the cell division process, using fluorescence microscopy in ways that aren’t possible with actual living cells in tissue cultures.

The final component was the model of the cell membrane.

“To really prove that we reconstituted the cytokinesis signal, we needed to add the bilayer membrane and then see if it could recruit the proteins that would be on the cortex of the cell,” Field said about the specialized layer beneath the cell membrane. “That’s the signal to the membrane we were looking for.”

The scientists saw this signal in part because Field chose to include actin in their system, a cellular component that is often discarded because it makes it so difficult to do experiments with the egg extract. Actin's job in the cell is to assemble into long filaments and meshworks, like Lego blocks fitting together.

The filaments provide a scaffold that allows other cellular components, including membranes, to move and change shape.  So Field reasoned that, despite the difficulty of using actin, it would be important to include it in a system intended to recapitulate the signals involved in membrane furrowing.

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“It’s not only microtubules signaling to the plasma membrane, but also microtubules signaling to the actin cortex that forms on top of the plasma membrane,” Nguyen said. “This phenomenon can be seen only when actin is around.”

There are multiple signaling complexes at work in the cleavage furrow, “talking” from the microtubules to the actin cortex and the cell membrane.

”The beauty of this system is that we have reconstructed cytokinesis from its individual structural components: actin, microtubules and membranes,” said Groen. “And we can now begin to spatially manipulate these components, which is not possible in live cells. I’m very excited by the possibilities.”

Their work is science at its most basic, Mitchison said, but cell division is central to embryonic development, stem cell renewal and cancer.

“These processes we talk about are the same as what's going on in our bone marrow to make new blood cells, for example,” he said. “So clearly understanding this biology is relevant to many types of diseases.”

This work was supported by NIH grants GM39565 and GM103785, and Marine Biological Laboratory fellowships from the Evans Foundation, MBL Associates and the Colwin fund.

Spatial organization of cytokinesis signaling reconstituted in a cell-free system

Source: Harvard

http://www.rdmag.com/news/2014/10/cell-division-minus-cells?et_cid=4240829&et_rid=733531634&type=headline

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Poet Laureate supports and promotes Poetry throughout the State

The Washington State Poet Laureate serves to build awareness and appreciation of poetry — including

the state’s legacy of poetry — through public readings, workshops, lectures and presentations in

communities, schools, colleges, universities and other public settings in geographically diverse areas of

the state. The appointed poet laureate serves a two-year term.

In April 2007, the Washington State Legislature passed a bill that recognized the value of poetry to the

culture and heritage of the state by establishing the Washington State Poet Laureate. Washington joined

several other states in appointing an official state poet laureate position.

The poet laureate is sponsored by Humanities Washington and ArtsWA, with the support of Gov. Jay

Inslee. The position is funded by the National Endowment for the Arts and Humanities Washington. Poets

can self-nominate every two years through an application process.

 

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Washington State Poet Laureate 2014-16

 

The current poet laureate is Elizabeth Austen, who assumed the role Feb. 1, 2014.

(Press release: 71   KB PDF | Image: 936  KB JPG ).

Austen is the author of a collection, Every Dress a Decision (Blue Begonia Press, 2011), and two

chapbooks, The Girl Who Goes Alone (Floating Bridge Press, 2010) and Where Currents Meet (Toadlily

Press, 2010). She produces literary programming for KUOW radio, a Seattle NPR affiliate, and is a

communications specialist and educator at Seattle Children’s Hospital.

Austen moved to Washington in 1989, at the time a stage actor, avid hiker and occasional writer of

poetry. After a transformative trip to the Andes region in her early 30s, Austen focused her efforts on

poetry. Her work trends towards the personal, touching on issues such as women’s societal roles,

courage and searching for spirituality.

Austen maintains a website of her work. To get in touch with Austen or book her for a workshop or

presentation, email [email protected].

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Past Poets Laureate

For more about the first Washington State Poet Laureate, visit out Past Poets Laureate page.

Public School Lunch | Lincoln Nebraska

The Lincoln public school system has gone above and beyond the legal requirements dishing out a daily vegetables smorgasbord. On top of veggie burgers and black-bean chili, the school system serves up local yellow watermelons, black and green peppers, cherry tomatoes, blueberries, ripe plums, and fresh cantaloupe. It was enough to earn the district a "Golden Carrot Award" from the Physicians Committee, a nonprofit medical organization of 12,000 doctors

Mind Body Green

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Human Brain Reminiscing

New research led by Cornell University neuroscientist Nathan Spreng shows for the first time that engaging brain areas linked to so-called “off-task” mental activities (such as mind-wandering and reminiscing) can actually boost performance on some challenging mental tasks. The results advance our understanding of how externally and internally focused neural networks interact to facilitate complex thought, the authors say.

“The prevailing view is that activating brain regions referred to as the default network impairs performance on attention-demanding tasks because this network is associated with behaviors such as mind-wandering,” said Spreng. “Our study is the first to demonstrate the opposite – that engaging the default network can also improve performance.”

Echo Photo Acoustic Imaging

Combining the two technologies in one device enables images of the body to be produced that contain far more information. The scientists have made the combination possible by integrating pulsing diode lasers in the ultrasound transducer, resulting in a compact and relatively inexpensive system. The measuring technique works best on relatively superficial parts of the body, down to a depth of fifteen millimeters.

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40 Years of Washington Stories

Whatcom Museum By   Samuel Dunnington   | Humanities Washington intern | 10.02.14

A symbolic ship is christened at the opening of the Whatcom Museum’s World of the Shipwright exhibit in 2007. The exhibit included oral histories from community members. Photo courtesy of the Whatcom Museum

Humanities Washington is celebrating our 40th anniversary with 40 Years of Washington Stories. Each week on Spark, we are offering a snapshot from our past, through stories that reflect the humanities in Washington State.

These exhibits exemplify the Whatcom Museum’s ongoing commitment to develop and maintain strong ties with the community that it serves. Information about the museum’s latest art, nature and northwest history exhibits can be found here.

Category: 40 Years of Washington Stories | Tags: Art, Bellingham, Dance, heritage, History,Suffragist Movement, Whatcom County

[email protected]