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Transcript of 104473454 Smells Like Cancer Electronic Noses and Disease Diagnostics
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Smells Like Cancer
Electronic Noses and Disease Diagnostics
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Abstract
The scents associated with different disease states have been documented for millennia.
Research in more recent times has focussed on the design of electronic noses based on sensor
array technology which can be used in the diagnosis of disease through the identification of
volatile organic biomarkers. This literature review focuses on the use of electronic noses in
the detection of cancers, with an emphasis on the identification of lung cancer. The
technology involved in the development of electronic noses is outlined and compared with
human olfaction systems in an attempt to describe how the technology works, particularly in
relation to its use in the diagnosis of cancer. The review will concentrate on giving an
overview of the research in this area to date and will attempt to identify areas which could
benefit from further investigation.
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Table of Contents
Page Section
3 Introduction
5 Olfactory Mechanisms
9 Volatile Organic Compounds and Human Breath
11 The Link between VOCs and Lung Cancer
13 Application of the Electronic Nose
14 Diagnostic Mechanisms
15 Conclusion
16 References
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Introduction
Since medical practice has been documented, reference has been made to the smell associated
with particular conditions. In modern medicine smell still acts as a warning precursor to the
presence of conditions such as diabetes, with the characteristic acetone scent which
accompanies the illness easily recognisable outside the community of medical professionals.
For many years scientists wondered at the potential of developing systems which would act
as human noses do but with a much higher level of specificity. The first electronic nose was
developed in the Jet Propulsion Lab (JPL) in NASA in 1982. It was borne out of the necessity
to protect astronauts on space shuttle missions, where the build-up of ammonia and other
volatile organic compounds (VOCs) within the confined space of a space shuttle was
identified as having potentially lethal consequences for the team. VOCs are essentially the
fumes or vapours given off by compounds but they may not be detected by the human nose,
for example in the case of odourless carbon monoxide poisoning. In the case of the NASA
experiment, ammonia levels were being monitored. By the time that the levels had built up to
the extent to which the team could physically smell them, the saturation levels were already
dangerously high. The need for an alternative which could act as an early warning system
was clear. Engineers working in the JPL decided to experiment with sensors and attempted to
replicate the principles involved in a human olfaction system with them. The result was a
highly sensitive instrument which could detect tiny quantities of VOCs using a handheld
detector linked to a micro PC (NASA 2011, www.enose.jpl.nasa.gov).
As an increasing body of research into the development of electronic noses was published,
researchers involved in the study of Chronic Obstructive Pulmonary Disease (COPD) became
interested in adapting the technology in an attempt to identify those people at risk of chronic
and debilitating lung disease. Early intervention could lead to a positive outcome for patients,
but a non-invasive method for detection and monitoring of the condition had so far evaded
researchers. At that time Gas Chromatography (GC), either alone or coupled with Mass
Spectrometry (GC/MS), was used to test breath samples in the diagnosis of certain conditions
such as COPD, asthma and post-operative infections. Experimental data had already shown
that GC/MS could identify complex volatile compounds associated with particular bacteria
which could, in turn, be used to pin-point disease. However this technology is expensive so
researchers decided to investigate how the sensor technology used by NASA in developing
its JPL nose could be adapted for use in a clinical setting.
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Studies involving the use of dogs to sniff out cancer tumours were emerging. The dogs had
been used in studies which focused on melanomas (Pickel et al. 2004), bladder cancer (Willis
et al. 2004), breast cancer and lung cancer (McCullough et al. 2006). These studies indicated
the enormous potential of the use of so-called smellprints in the diagnosis of chronic illnesses
at an early stage without invasive tests. Smellprints, also known as biomarkers, are essentially
the fingerprints left by volatile organic compounds. Each VOC stimulates a different sensor
within a sensor array system. This in turn produces a characteristic pattern and when
compared with the patterns of known biomarkers in a library or database the readout
produced can be interpreted with ease (Hovarth 2010; Wilson & Baietto 2011).
Thirteen electronic noses have been developed by 10 different companies worldwide, with a
further two in development at March 2011. These e-noses have a variety of applications
across industries. For example, the Bloodhound BH-114 is used to detect toxins in water
samples and food spoilage; the Sacmi Imola is used to detect the presence of bacteria in corn
crops and the Fox 4000 is used to analyse flavours in the biopharmaceutical industry in order
to make medications more palatable (Wilson & Baietto 2011).
The purpose of this literature review is not to assess all of the applications of e-nose
technology. It will focus specifically on the detection of cancers with an emphasis on the use
of electronic noses to identify lung cancer. The actual technology involved in the
development of electronic noses will not be discussed in detail, but will be outlined and
compared with human olfaction systems in an attempt to describe how the technology works,
particularly in relation to its use in the diagnosis of cancer. The review will concentrate on
giving an overview of the research in this area to date and will attempt to identify areas which
could benefit from further investigation.
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Olfactory Mechanisms
Human Olfactory Mechanism
The human olfactory system is incredibly complex but, despite being the focus of major
research including a gene-mapping project (Buck & Axel 1991) which resulted in a Nobel
Prize for Linda Buck and Richard Axel, many aspects of the human olfactory process are still
not understood.
The human olfactory system is duplex in nature. The Primary Olfactory system is that which
we rely upon to detect odours which are in the gaseous or solid phase. The Accessory
Olfactory system is used to detect pheromones, or fluid-phase olfactory stimuli. This review
deals with those odours detected by the primary olfactory system, most notably VOCs.
When we breathe in, the molecules which produce odours pass through the nasal passages
into the nasal cavity, which is lined with the olfactory epithelium containing olfactory
sensory neurons. Odour molecules dissolve in mucus as they enter the cavity. The dendrites
of the sensory neurons have olfactory receptors which bind the odour molecules to
transmembrane proteins. This binding results in an action potential which stimulates the
receptor neuron. The receptor neurons stimulate axons in the olfactory nerve, sending a signal
through the cribriform plate to the olfactory bulb and on to the olfactory cortex in the brain.
There are some ten million sensory receptor cells in the nasal cavity. Receptors in the same
area seem to detect very similar odour molecules. Some receptors are specific to one odour
molecule, others respond to a group of molecules (Davide et al. 2003).However, within the
brain it appears that information from olfactory stimuli are passed to other sensory receptors,
particularly those in the hippocampus which are involved in emotional responses. Odour
information is stored within the brain as long-term memory, allowing each signal to be
interpreted as a specific smell which we associate with visual, gustatory, emotional and
other stimuli.
Artificial Olfaction Mechanisms
Artificial Olfaction systems, more commonly known as Electronic Noses, have been
designed to mimic the human olfactory system in a very simplistic manner. The systems are
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quite diverse in nature but have a common end-goal: the effective detection and interpretation
of odour molecules in order to recognise, or identify, a smell.
Comparing Human and Artificial Olfaction Mechanisms
A diagrammatic comparison between human and electronic olfaction systems has been
characterised by Turner (2010) and is shown below (Fig. 1):
The diagram above clearly shows the mimicry involved in the development of an electronic
nose. The odours produced by odour molecules are detected using a sensor array consisting
of a number of sensors, each programmed to recognise a particular odour molecule or cluster
of such molecules. When the molecule is present, the sensor is stimulated and sends an
electrical signal to a processor which is programmed algorithmically to recognise and
interpret patterns which, in turn, can be identified as a mixture of volatile compounds.
Unlike human noses, however, electronic noses will normally have fewer than 100 sensors,
significantly less than the 10,000,000 found in the olfactory epithelium. Overlap in the
molecules they detect is built into the system, just as there is overlap in a human olfactory
system. The effect of this overlap is much less than that in the human system however,
because the sensors can be chosen in a very selective manner (Davide et al. 2003). A
summary comparison of the features of human and electronic olfactory systems has been
produced by Davide et al. and is included below (Table 1).
Fig.1: Comparison between human and artificial olfaction systems.
(Turner et al., 2010 in Nature Reviews: Microbiology)
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Table 1: Summary of the Features of Human and Electronic Noses
Human Electronic
10 million receptors, self generated 5-100 chemical sensors, manually replaced
10-100 selectivity classes 5-100 selectivity pattern
Initial reduction of number of signals
(1000 to 1)
smart sensor arrays can mimic this?
Adaptive Perhaps possible
Saturates Persistent
Signal treatment in real time Pattern recognition hardware may do this
Identifies a large number of odours Has to be trained for each application
Cannot detect some simple molecules Can detect also simple molecules (H2, H2O, CO, CO2)
Detects some specific molecules Not possible in general at very low concentrations
Associative with sound, vision, experience, etc. Multisensor systems possible
Can get infected Can get poisoned
From this table, it is clear that each system has advantages over the other. In particular, the
issue of saturation can be overcome using an Electronic Nose. Humans quickly become
accustomed to smells at particular levels and they may no longer be interpreted by the brain
as significant. However Electronic Noses will always interpret the signal received so
saturation does not arise as an issue. It should also be noted that advances in technology since
the Davide paper (2003) was published has meant that some of the constraints of theelectronic nose have been overcome, particularly the detection of specific molecules and the
development of pattern recognition algorithms which allow real-time analysis of signals.
(Wilson & Baietto 2011).
Electronic Noses have been developed based on different technologies. The following table
summarises the types of sensor currently available, the sensitive component of the sensor and
the detection principle upon which each is based (Davide et al. 2003).
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Table 2: Electronic Nose Technologies
Type Acronym Sensitive component Detection Principle
Semiconducting metal
oxides
MOS, Taguchi Doped semiconducting
metal oxides e.g. SnO2
Resistance change
Quartz Crystal
Microbalance
Surface Acoustic Wave
QMB
SAW
Organic or inorganic layers
(GC)
Frequency change due to
mass change
Conducting Polymers CP Modified conducting
polymers
Resistance change
Catalytic field-effect
sensors
MOSFET Catalytic metals Work-function change
Pellistor Catalysts Temperature change due
to chemical reactions
Fluorescence sensors Organic dyes Light intensity changes
Electrochemical cells Solid or liquid electrolytes Current or voltage change
Infrared sensors - IR absorption
These sensors are combined in sensor arrays which function collectively as an electronic
nose.
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Volatile Organic Compounds (VOCs) and human breath
VOCs are gaseous molecules based on carbon and hydrogen. Only those which are
physiological in nature and contained in human breath will be examined in this review.
Historical Perspective
From the earliest times the smell associated with particular illnesses has been recognised and
documented. The French chemist Lavoisier was the first to analyse human breath, proving
that it contained CO2. His work led others to investigate human breath and the first alcohol
breath test was devised in the 1800s, followed by the development of a breath test for
diabetes based on acetone concentration.
Initially, research into VOCs was based on the knowledge that pathogens produced odours
and also caused or were the result of disease. Roscioni et al. (1968) postured that pathogens
could be identified by analysing microbial metabolites and that this could, in turn, be used as
a diagnostic tool.
In 1971 Linus Pauling captured a sample of his own breath in a frozen tube. The sample was
analysed using Gas Chromatography and found to contain several hundred volatile organic
compounds in various proportions, mainly in picomolar concentrations (Pauling et al. 1971).
In the 1970s Gas Chromatography was the latest tool in the arsenal of science. It was used
alone and later in tandem with Mass Spectrometry to analyse complex mixtures of VOCs
from a variety of sources.
Diagnostic Potential
Manolis (1983) published a review based on the diagnostic potential of breath analysis. Hiswork was based on the use of GC, GC/MS and MS/MS as analytical methods. From the data
available at that time, clear evidence existed of a link between microbial and cellular
metabolism and the production of VOCs. Manolis also identified the factors which cause
either elevation or suppression of certain VOCs, including weight, gender, exercise and
menstruation. VOCs which would later be identified as biomarkers for cancerparticularly
isopreneare identified, as is the need for further research into the nature of the biochemical
pathways which cause the production of VOCs within the body. The cost of GC/MS as
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analytical tools and the need to develop mechanisms for differentiating between tidal and
alveolar breath samples were also highlighted by Manolis.
In 1992 Dr. Michael Phillips published a review in the Scientific American journal outlining
contemporary thinking in relation to the detection and use of VOCs in the diagnosis of
disease. Philips had previously published papers on carbon disulphide (Phillips et al. 1986),
endogenous acetone (Phillips & Greenberg 1987a), endogenous ethanol and other compounds
(Phillips & Greenberg 1987b), elevated levels of acetone (Phillips et al. 1989) the links
between carbon disulphide and coronary disease (Phillips 1992) and the detection of VOCs in
alveolar air (Phillips & Greenberg 1992). In his review paper, Philips clearly refers to the
need for further research into the issue of the origin of exhaled VOCs in human breath as
either exogenous or endogenous. He also points to the need to develop statistical or other
tools to determine whether the identification of one of the biomarkers of any particular illness
in a patients breath sample is due to chance or to actual illness. He continued to conduct
research into VOCs and, in 1999 published a paper on VOCs as biomarkers in the detection
of lung cancer (Phillips et al. 1999).
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The Link between VOCs and Lung Cancer
In his Lancet paper (Phillips et al. 1999), Phillips reported the results of a clinical test
involving 108 patients who had been referred for bronchoscopy but without any history of
neoplasm. Samples of breath were taken and analysed using GC/MS. A total of sixty patients
were diagnosed with lung cancer and 22 VOCs were found to be common to them, regardless
of how advanced their tumour was. Further tests proved that a correct diagnosis of cancer
could have been predicted in 71.7% of those patients based solely on the results of the breath
analysis using the VOCs as biomarkers, referred to by Phillips as the fingerprint of cancer.
The results were the first to give conclusive evidence of the diagnostic potential of VOCs and
built on the work of ONeill et al. (1988) which identified 28 potential biomarkers from the
exhaled breath of lung cancer patients but made no attempt to compare these results to those
of patients without cancer.
Those biomarkers identified by Phillips are included in Table 3, below:
Table 3: Biomarkers of Lung Cancer
Compounds Identified as Biomarkers of Lung Cancer
Styrene Cyclopentane, methyl Octane, 3-methyl Haxanal
Heptane
2,2,4,6,6-pentamethyl
Cyclopropane, 1-methyl-
2-pentyl
1-hexene Cyclohexane
Heptane 2-methyl Methane, trichlorofluoro Nonane, 3-methyl Benzene, 1-
methylethenyl
Decane Benzene 1-heptene Heptanal
Benzene propyl- Benzene 1,2,4-trimethyl Benzene, 1,4-dimethyl
Undecane 1,3-butadiene, 2-methyl
(isoprene)
Heptane, 2,4-dimethyl
Phillips asserted that alkanes, mono-methylated alkanes and aromatics formed the basis of the
biomarkers. This view would be validated by the work of Di Natale some four years later (Di
Natale et al. 2003). The validation in separate studies of these biomarkers was a major step
forward. However the identification of biomarkers alone did nothing to address the issues
pertaining to the use of the sampling and analytical methods which were available at the time.
The breath testing apparatus used by Phillips was cumbersome and the distinction between
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tidal and alveolar breath was made using a mathematical formula (Phillips et al. 1986). The
use of GC analysis required labour intensive sample preparation and GCs were found only in
analytical laboratories. Their cost was prohibitive for use within clinical settings and required
specialist training. Effectively, this meant that the use of breath testing using Phillips method
would not be suited to routine investigations in a hospital environment.
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Application of the Electronic Nose
As previously mentioned, the JPL e-nose was designed in 1982 based on the work of Persaud
and Dodd in Manchester (Wilson & Baietto 2011). Further Electronic Noses were developed
from that point, mainly focussing on the detection of pathogens in foodstuffs. A group of
engineers based in Romes Tor Vergata University led by Corrado Di Natale were the first to
suggest, in 2003, that an Electronic Nose could be used for the early detection of lung cancer
(Di Natale et al. 2003). A group of sixty patients was tested and a QMB sensor based
Electronic Nose detected 100% of lung cancer patients based on an analysis of exhaled breath
compared to a library of known biomarkers of lung cancer.
The work of Di Natale was furthered by Machado et al. (2005). This study involved an initial
group of 59 people, 45 of whom were healthy and 14 of whom had lung cancer. It showed
that a Cyranose 320 Electronic Nose could discriminate between health individuals and those
with lung cancer. A further validation study reinforced the results of the initial study,
showing that the Electronic Nose had a specificity of 91.9% in the detection of the patients
with tumours. Although the study concluded that the Electronic Nose could be used in the
detection and management of lung cancer, it came with cautionary notes and suggested that
further studies were required amongst different populations and between populations with a
range of conditions rather than exclusively between healthy candidates and those with lung
cancer at different stages of development. In addition, Phillips referred to the need to
discriminate between the endogenous and exogenous sources of the VOCs, which was absent
from the study (Phillips 2005).
By 2005 specific research into biomarkers for asthma and COPD was underway based on the
fundamental work conducted by Phillips and others in the early to mid 1980s on VOCs.Studies had pointed particularly to the levels of Nitric Oxide in the breath samples of patients
with both Asthma and COPD. In 2007 Dragonieri et al. published a study on patients with
asthma as part of a control group which referred to the ease with which asthma could be
detected using a Cyranose 320 Electronic Nose (Dragonieri et al. 2007). This was followed in
2009 by a further paper in which the same electronic nose was able to discriminate between
the smellprints of non-small cell cancer of the lung and COPD (Dragonieri et al. 2009). Their
work also led to the publication by Fens et al. (2009) of a paper in which an Electronic Nose
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was successfully used to discriminate between asthma and COPD. The study was also able to
discriminate between smokers and non-smokers who formed part of the control group.
Diagnostic Mechanism
Pioneering work on biomarkers, largely conducted using GC or GC/MS has led to the
development of libraries or databases of biomarker patterns which have been identified with a
particular illnesses. Engineers have been able to construct sensor arrays from different
materials which are designed to detect smellprints, or biomarker patterns. This implies that
Electronic Noses detect not individual odour molecules but clusters of these molecules
which, together, imply the presence of a particular condition. By reference with an electronic
database of biomarkers the particular smell print can be used to accurately recognise the
smell of a disease. This is possible even at the earliest stages of disease, giving the Electronic
Nose immense power in modern medical terms.
Unlike human noses, Electronic Noses can detect disease, differentiate between healthy and
diseased candidates and also differentiate between diseases even if they have very similar
biomarkers.
The collection of breath samples has been simplified greatly since the early work conducted
by Phillips. DAmico has recently described the use of two interconnected Tedlar bags.
Patients breathe into the first (smaller) of the bags through a mouthpiece. This collects the
initial tidal exhaled breath with the alveolar air being collected in the second bag by means of
a valve. (DAmico et al. 2009). The sampling system is highly portable, unlike Phillips
original apparatus.
The issue of endogenous and exogenous sources of VOCs in breath has also been addressed
to a large extent. It is now known that many of the alkanes and mono-methylated alkanes
which are biomarkers for lung cancer are formed mainly due to oxidative stress within the
tumour cells. Other biomarkers are the result of biochemical pathways at cellular level, many
of which are still not fully understood (Chan et al. 2010). What is clear, however, is that
disease diagnosis using Electronic Nose technology is well within reach.
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Conclusion
The Present Position
Over the past fifty years, since the development of Gas Chromatographic techniques, research
into odour molecules has flourished. This research has led to the development of biomarkers
for diseases including various cancers, lung conditions, schizophrenia, rheumatoid arthritis
and others (Wilson & Baietto, 2011). The development of libraries of biomarker smellprints
has led to the use of Electronic Noses in diagnostic research.
The Future
The potential of the Electronic Nose in disease diagnosis is immense. The research which has
led to its development spans at least three hundred years but has become intensive in the past
fifty years. This has led to the development of a highly cost effective, sensitive, specific
instrument which is portable. Electronic Noses can be designed simply to detect one
condition, to differentiate between conditions with similar symptoms but different smell
prints or they can be adapted by changing the sensors within the array to detect multiple
conditions, for example in a small hospital setting. There is considerable scope using the
internet and other technologies to use Electronic Noses in locations far removed from the
hospital setting, for example in remote communities. This can allow for early intervention
and minimise the need for hospital care, thus reducing costs in the healthcare system.
There is a clear need for the research on Electronic Noses to focus on validation of methods
using clinical trials in order to take the technology into mainstream medical practice and this
is recommended as the primary focus of any immediate studies on Electronic Noses and
disease diagnostics.
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