Navigating the Scientific Literature

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Sundem, G. (2010). Brain Candy: Science, Paradoxes, Puzzles, Logic, and Illogic to Nourish Your Neuron.

Navigating the Scientific LiteratureJohn Borghi, PhD | @JohnBorghi

Liang, P., Xu, Y., Zhang, X., Ding, C., Huang, R., Zhang, Z., ... & Huang, J. (2015). CRISPR/Cas9-mediated gene editing in human tripronuclear zygotes.Protein & Cell, 1-10.

Noble, K. G., Houston, S. M., Brito, N. H., Bartsch, H., Kan, E., Kuperman, J. M., ... & Sowell, E. R. (2015). Family income, parental education and brain structure in children and adolescents. Nature Neuroscience, 18, 773–778.

Searching the Scientific Literature

• Allow Time

• Isolate Objective

• Document Carefully

• Be Selective

• Verify

• Know When to Quit

• What search are you doing?

– Exploratory

– Specific research question

– Searching for a particular article

Searching the Scientific Literature

Adapted from the International University of Bremen

Cargill, M. & O’Connor. P. (2009). Writing Scientific Research Articles: Strategy and Steps.

Gargouri, Y., Larivière, V., Gingras, Y., Carr, L., & Harnad, S. (2012). Green and gold open access percentages and growth, by discipline. arXiv preprint arXiv:1206.3664.

Halcombe, A. (2013). Scholarly publishers and their high profits.

Harnad, S. (1994). The Subversive Proposal. In Ann Shumelda Okerson & James J. O'Donnell (Eds.) Scholarly Journals at the Crossroads: A Subversive Proposal for Electronic Publishing

Van Noorden, R. (2013). NIH sees surge in open-access manuscripts.

Pepe, A., Mayernik, M., Borgman, C. L., & Van de Sompel, H. (2010). From artifacts to aggregations: Modeling scientific life cycles on the semantic web. .Journal of the American Society for Information Science and Technology, 61(3), 567-582.

Colditz, J. (2012). Publication process with OA. Figshare. doi:10.6084/m9.figshare.91458

Bohannon, J. (2013). Who’s afraid of peer review?. Science, 342, 60-65.

Beall’s List of Predatory Publishers 2015

Let’s Search For Some Stuff!

Human genome editing with CRISPR

The relationship between parental education and neuroscience

The relationship between thinking and brain cancer

Let’s Search For Some Stuff!

Miller, E. K., & Cohen, J. D. (2001). An integrative theory of prefrontal cortex function. Annual review of neuroscience, 24(1), 167-202.

Gong, L. I., Suchard, M. A., & Bloom, J. D. (2013). Stability-mediated epistasis constrains the evolution of an influenza protein. Elife, 2, e00631.

Karnowski, A., Chevrier, S., Belz, G. T., Mount, A., Emslie, D., D’Costa, K., ... & Corcoran, L. M. (2012). B and T cells collaborate in antiviral responses via IL-6, IL-21, and transcriptional activator and coactivator, Oct2 and OBF-1. The Journal of experimental medicine, 209(11), 2049-2064.

Bernier, U. R., Kline, D. L., Allan, S. A., & Barnard, D. R. (2015). Laboratory Studies of Aedes aegypti attraction to ketones, sulfides, and primary chloroalkanestested alone and in combination with l-lactic acid. Journal of the American Mosquito Control Association, 31(1), 63-70.

Wang, N., Li, Y., Niu, W., Sun, M., Cerny, R., Li, Q., & Guo, J. (2014). Construction of a live‐attenuated HIV‐1 vaccine through genetic code expansion. AngewandteChemie, 126(19), 4967-4971.

Maldacena, J. (1999). The large-N limit of superconformal field theories and supergravity. International journal of theoretical physics, 38(4), 1113-1133.

Gardner, C. C., & Gardner, G. J. (2015). Bypassing interlibrary loan via Twitter: An Exploration of #icanhazpdf Requests.

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